Department of Biology

 

 
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  1. 2024
  2. Published

    AI Implementation and Capability Development in Manufacturing: An Action Research Case

    Eklöf, Jon, Snis, U. L., Hamelryck, Thomas Wim, Grima, A. & Rønning, Ola, 2024, Proceedings of the 57th Hawaii International Conference on System Sciences - HICSS 2024. Hawaii International Conference on System Sciences, 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  3. 2023
  4. Published

    Enhancing Flood Tolerance in Wheat (Triticum aestivum) and Rice (Oryza sativa): Identifying Key Physiological Traits

    Herzog, Max, Tong, Shuai, Kjær, Johan Emil, Konnerup, D., Peralta Ogorek, Lucas León, Song, Zhiwei, Pellegrini, Elisa & Pedersen, Ole, 2023. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  5. Published

    Linkages between seagrass tissue O2 dynamics and ecosystem oxidation and feedbacks are revealed using microsensors in situ

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2023, p. 221. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  6. Published

    Restricted O2 consumption in pea roots induced by hexanoic acid is linked to depletion of Krebs cycle substrates

    Gargiulo, S., Casolo, V., Zancani, M., Pellegrini, Elisa, Filippi, A., Konnerup, D., Morandini, P. & Pedersen, Ole, 2023, p. 55. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  7. Published

    Variational Open-Domain Question Answering

    Liévin, V., Motzfeldt, A. G., Jensen, I. R. & Winther, Ole, 2023, In: Proceedings of Machine Learning Research. 202, p. 20950-20977 28 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  8. 2022
  9. Published

    ATP signaling in pancreatic cancer: the P2X7 receptor

    Magni, Lara, Bouazzi, R., Christensen, Nynne, Tozzi, M., Poulsen, M., Johansen, J., Pless, Stephan & Novak, Ivana, 2022, In: Acta Physiologica. 236, S725, p. 661-661

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  10. Published

    Hypoxia in tomato fruit during ripening caused by contrasting tissue-specific diffusion resistance and respiration

    Xiao, H., Tong, Shuai, Salagovic, J., Pedersen, Ole, Verboven, P. & Nicolaï, B. M., 2022, p. 48.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  11. Published

    Linkages between seagrass tissue O2 dynamics and ecosystem oxidation and feedbacks revealed using microsensors in situ

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2022, p. 22. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  12. Published

    Molecular mechanisms that underlie the root cortex expansion in response to low oxygen

    Yamauchi, T., Sumi, K., Morishita, H., Pedersen, Ole, Inukai, Y. & Nakazono, M., 2022, p. 22.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  13. Published

    Multiple stressors linked to internal O2 imbalance contribute to seagrass die-off in a subtropical lagoon: Resilience with steep cliffs and cascading consequences

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2022.

    Research output: Contribution to conference › Poster › Research › peer-review

  14. Published

    Sialylation of N-glycans affects the lipid secretion governed by specialized secretory lysosomal organelles through an effect on the V-ATPase

    Khoder-Agha, F., Song, Ming, Borre, M. T., Marinova, I. N., Ye, Z., Pedersen, Stine Helene Falsig, Dabelsteen, Sally & Wandall, Hans H., 2022, In: Glycobiology. 32, 11, p. 1012-1013 2 p., P103.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  15. Published

    The barrier to radial oxygen loss prevents H2S intrusion and its toxic effect

    Peralta Ogorek, Lucas León, Takahashi, H., Nakazono, M. & Pedersen, Ole, 2022, p. 15.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  16. Published

    The rice wax synthesis-related gene Leaf Gas Film-1 (LGF1) is involved in the formation of the radial oxygen loss barrier

    de la Cruz Jiménez, J., Noorrohmah, S., Zeisler, V., Schreiber, L., Peralta Ogorek, Lucas León, Pellegrini, Elisa, Pedersen, Ole, Nagai, K., Ashikari, M., Takahashi, H. & Nakazono, M., 2022, p. 67.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  17. Published

    The root barrier to radial oxygen loss: a jack of all trades

    Peralta Ogorek, Lucas León, Tong, Shuai, Kjær, Johan Emil, Song, Zhiwei, Bastegaard, V. K., Zonta, F., Yamauchi, T., de la Cruz Jiménez, J., Takahashi, H., Nakazono, M., Herzog, Max, Pellegrini, Elisa & Pedersen, Ole, 2022, p. 14.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  18. 2021
  19. Published

    Characterizing Conformational Changes of ASIC1a During Gating and Peptide Modulation

    Heusser, Stephanie, Sheikh, Zeshan Pervez, Borg, C. B., Galleano, I. & Pless, Stephan, 2021, p. 337A-337A.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  20. Published

    Effects of flooding stress on the saltmarsh halophyte Salicornia fruticosa (L.) L. upscaling perspectives

    Vuerich, M., Cingano, P., Petrussa, E., Braidot, E., Pellegrini, Elisa, Mestroni, M. & Boscutti, F., 2021, p. 97. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  21. Published

    Efficient Generative Modelling of Protein Structure Fragments using a Deep Markov Model

    Thygesen, Christian Bahne, Al-Sibahi, A. S., Steenmanns, C. S., Sanz Moreta, Lys, Sørensen, A. B. & Hamelryck, Thomas Wim, 2021, International Conference on Machine Learning, 18-24 July 2021, Virtual. PMLR, p. 10258-10267 (Proceedings of Machine Learning Research, Vol. 139).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  22. Published

    Time-efficient Bayesian Inference for a (Skewed) von Mises Distribution on the Torus in a Deep Probabilistic Programming Language

    Rønning, Ola, Ley, C., Mardia, K. V. & Hamelryck, Thomas Wim, 2021, 2021 IEEE International Conference on Multisensor Fusion and Integration for Intelligent Systems (MFI). IEEE, p. 1-8

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  23. 2020
  24. Published

    Bayesian protein superposition using Hamiltonian Monte Carlo

    Sanz Moreta, Lys, Al-Sibahi, A. S. & Hamelryck, Thomas Wim, Oct 2020, Proceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020. IEEE, p. 1-11 9288019

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  25. Published

    Slope hydrology and permafrost: The effect of snowmelt N transport on downslope ecosystem

    Rasmussen, Laura Helene, Ambus, Per Lennart, Zhang, W., Jansson, P. E., Michelsen, Anders & Elberling, Bo, 1 May 2020. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  26. Published

    Internal leaf and meristem O2 and H2S dynamics of a tropical seagrass identify mechanisms of large-scale die-off events

    Johnson, C. R., Koch, M., McNicholl, C., Pedersen, Ole & Madden, C. J., 16 Feb 2020.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  27. Published

    Exploring the Protein-Membrane Interactions on the Intracellular Side of PRLR

    Araya-Secchi, R., Bugge, K., Kragelund, Birthe Brandt & Arleth, Lise, 7 Feb 2020, In: Biophysical Journal. 118, 3, Suppl.1, p. 57A-57A 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  28. Published

    Small-angle Neutron Scattering Shows that the Solution Structures of the Bacterial Mg2+-Channel CorA are Overall Similar with and without Mg2+ Bound

    Arleth, Lise, Johansen, Nicolai Tidemand, Bengtsen, T., Larsen, A. H., Tidemand, Frederik Grønbæk, Pomorski, Thomas Guenther & Lindorff-Larsen, Kresten, 7 Feb 2020, In: Biophysical Journal. 118, 3, Suppl. 1, p. 12A 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  29. Published

    Bacteriophages: Emerging Applications in Medicine, Food, and Biotechnology

    Sohail, H. A., Coffey, A., Debrowska, K., Meyer, I. M., Middelboe, Mathias, Sohail, M. & Clokie, M. R. J., 2020, In: PHAGE: Therapy, Applications, and Research. 1, 2, p. 75-82 8 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  30. Published

    Context Matters in Disorder Based Protein Communication

    Kragelund, Birthe Brandt, Prestel, Andreas, Wickmann, N., Martins, J., Boomsma, Wouter, Staby, L., Hendus-Altenburger, R. & Skriver, Karen, 2020, In: Biophysical Journal. 118, 3, suppl. 1, p. 491A 2407-Plat.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  31. Published

    Genome wide association study of circulating interleukin 6 levels identifies novel loci

    Ahluwalia, T. S., Armstrong, N. J., Aslibekyan, S., Beekman, M., Cheng, Y., deGeus, E., Delgado, G. E., Marek, D., Kanoni, S., Nolte, I. M., Porcu, E., Seppala, I., Standl, M., Teumer, A., Thalamuthu, A., Trompet, S., Benjamin, E. J., Feitosa, M. F., Homuth, G., Lahti, J. & 30 others, Liu, Y., Timpson, N. J., Visvikis-Siest, S., Voelker, U., Baune, B. T., Boomsma, D., Deary, I. J., Evans, D. M., Ferreira, M. A., Gaunt, T., Gudnason, V., Hamsten, A., Humphries, S. E., Koeing, W., Kumari, M., Lawlor, D. A., Nauck, M., Price, J. F., Sørensen, Thorkild I.A., Stacey, D., Stathopoulou, M. G., Tanaka, T., Wannamethee, S. G., Rotter, J. I., Dehghan, A., Boerwinkle, E., Sneider, H., Psaty, B. M., Prins, B. P. & Alizadeh, B. Z., 2020, In: European Journal of Human Genetics. 28, Supplement 1, p. 307-308 2 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  32. Published

    Optimal Variance Control of the Score-Function Gradient Estimator for Importance Weighted Bounds

    Liévin, V., Dittadi, A., Christensen, Anders & Winther, Ole, 2020, In: Advances in Neural Information Processing Systems. 2020-December, 12 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  33. Published

    Rose replant disease: detailed analyses of plant reactions, root endophytes and rhizosphere microbial communities

    Baumann, A., Yim, B., Grunewaldt-Stöcker, G., Liu, B., Beerhues, L., Sapp, M., Nesme, Joseph, Sørensen, Søren Johannes, Smalla, K. & Winkelmann, T., 2020, In: Acta Horticulturae. 1283, p. 97-104 8 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  34. Published

    Social relations and self-rated health in a multi-ethnic social housing area undergoing demolition

    Kvorning, M. F., Srivarathan, Abirami, Nygaard, S. & Lund, Rikke, 2020, In: European Journal of Public Health. 30, Supplement 5, p. V369 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  35. Published

    Volatile Organic Compound fluxes in a subarctic peatland and lake

    Seco, Roger, Holst, T., Westergaard-Nielsen, Andreas, Li, Tao, Simin, Tihomir, Jansen, J., Crill, P., Friborg, Thomas, Holst, J., Rinne, J. & Rinnan, Riikka, 2020. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  36. 2019
  37. Published

    PACAP-38 and PACAP(6-38) degranulate rat meningeal mast cells via the orphanMrgB3-receptor

    Pedersen, S. H., la Cour, S. H., Callø, Kirstine, Hauser, Frank, Olesen, Jes, Klærke, Dan Arne & Jansen-Olesen, I., Sep 2019, p. 4-4.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  38. Published

    Structural studies of temperate phage genetic switches

    Varming, A., Rasmussen, K. K., Kilstrup, M., Hammer, K., Ringkjøbing Jensen, M., Ingmer, Hanne & Lo Leggio, Leila, 18 Aug 2019, p. e105-e105. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  39. Published

    Shining light on split fluorescent protein fitness landscapes using peptide array-based deep substitutional scanning

    ANTONESCU, O., Johansson, Kristoffer Enøe & Winther, Jakob R., 30 Jun 2019.

    Research output: Contribution to conference › Poster › Research › peer-review

  40. Published

    A Quantitative Framework for the Thylacine-Canid Comparison: Integrating Development, Morphology, Genomics and Evolutionary History

    Hipsley, Christy Anna, Jun 2019, p. S61-S61. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  41. Published

    A Multi-State Coarse-Grained Simulation Model Captures Conformational Cycling in P-Type ATPases

    Wang, Yong, Saleh, N., Chu, X. & Lindorff-Larsen, Kresten, 2019, In: Biophysical Journal. 116, 3, suppl. 1, p. 300a 1484-Plat.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  42. Published

    A Probabilistic Programming Approach to Protein Structure Superposition

    Sanz Moreta, Lys, Al-Sibahi, A. S., Theobald, D., Bullock, W., Rommes, B. N., Manoukian, Andreas & Hamelryck, Thomas Wim, 2019, 2019 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2019. Baruzzo, G., Daberdaku, S., Di Camillo, B., Furini, S., Giordano, E. D. & Nicosia, G. (eds.). IEEE, 5 p. 8791469

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  43. Published

    A new CO2 microsensor enables us to ‘unlock the doors to a secret chamber’ inside plant tissues

    Pedersen, Ole, Revsbech, N. P., Garcia-Robleo, E., Kotula, L., Winkel, A., Armstrong, W. & Colmer, T. D., 2019, p. 19. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  44. Published

    Anatomical adaptations to gradients in soil water of wild species of Poaceae

    Yamauchi, T., Pedersen, Ole, Nakazono, M. & Tsutsumi, N., 2019, p. 25. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  45. Published

    Evaluation of diverse chickpea lines for anoxia tolerance and investigation of associated physiological traits

    Kotula, L., Nielsen, S. R., Pedersen, Ole & Colmer, T. D., 2019, p. 72. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  46. Published

    Hypoxic floodwaters affect seed dormancy transitions in an Echinochloa crus-galli population from cropped lowlands

    Peralta Ogorek, Lucas León, Striker, G. G. & Mollard, F. P. O., 2019, p. 73. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  47. Published

    In situ quantification of local O2 concentration in 3D bioprinted constructs using luminescent nanoparticles

    Gelinsky, M., Akkineni, A. R., Trampe, Erik, Koren, K., Lode, A., Krujatz, F. & Kühl, Michael, 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, p. 135 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium, Vol. 40).

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

  48. Published

    Induction of a barrier to radial oxygen loss in roots of rice by low concentrations of monocarboxylic acids

    Colmer, T., Kotula, L., Malik, A. I., Takahashi, H., Konnerup, D., Nakazono, M. & Pedersen, Ole, 2019, p. 20. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  49. Published

    Kinesins 1 and 3 Cooperate on the Same Vesicle to Transport Exocytotic Carriers

    Serra-Marques, A., Martin, M., Katrukha, E., Grigoriev, I., Liu, Q., Pedersen, Lotte Bang, Kapitein, L. & Akhmanova, A., 2019, In: Biophysical Journal. 116, 3, Suppl. 1, p. 309a 1526-Plat.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  50. Published

    Local hypoxia in the shoot apex is maintained under normoxic growth and acts as an endogenous cue to regulate meristem activity

    Weits, D. A., Pedersen, Ole, Van Dongen, J. T. & Licausi, F., 2019, p. 32. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  51. Published

    Mechanisms of mercury resistance in High Arctic snow and freshwater bacteria

    Kroer, Niels & Maccario, L., 2019.

    Research output: Contribution to conference › Conference abstract for conference › Research

  52. Published

    Physiological and anatomical dissection for snorkeling in rice

    Mori, Y., Yin, Y., Suzui, N., Colmer, T. D., Ashikari, M., Kawachi, N., Pedersen, Ole & Nagai, K., 2019, p. 75. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  53. Published

    Phytotoxicity of hexanoic acid in Pisum sativum: effects on roots and isolated mitochondria

    Zancani, M., Casolo, V., Filippi, A., Pellegrini, Elisa, Gargiulo, S., Nielsen, S. R. & Pedersen, Ole, 2019. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  54. Published

    Surface modification of halloysite nanotubes increases surface area and airway toxicity in mice

    Hougaard, Karin Sørig, Barfod, Kenneth Klingenberg, Bendtsen, K. M., Berthing, T., Koivisto, J., Poulsen, S., Segal, E., Holländer, A., Jensen, K. A. & Vogel, U., 2019, In: Toxicology Letters. 314, Supplement 1, p. S200-S201 2 p., P11-015.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  55. Published

    The short-term plasticity of Hong Kong's Platygyra sp. corals: insight on coral in-situ metabolism and ex-situ manipulations

    Dellisanti, Walter, Tsang, R. H., Ang Jr, P., Wu, J. & Chan, L. L., 2019, 4th Xiamen Symposium on Marine Environmental Sciences (XMAS-IV): The Changing Ocean Environment: From a Multidisciplinary Perspective.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  56. Published

    Zea nicaraguensis, a wild relative of maize, forms a strong barrier to radial oxygen loss in both the main axis and laterals of adventitious roots during waterlogging

    Kurokawa, Y., Hiroki, Y., Nakayama, Y., Watanabe, K., Takahashi, H., Floytrup, A. H., Omori, F., Mano, Y., Colmer, T. D., Pedersen, Ole & Nakazono, M., 2019, p. 70. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  57. 2018
  58. Published

    FoxA1 in synergy with IFNβ controls PDL1 expression in anti-inflammatory T cells via binding to a 60-nucleotide region in the Pdl1 promoter

    Hadi, M., Rasmussen, L. M., Kosicki, M., Carlsson, R. & Issazadeh-Navikas, Shohreh, Oct 2018, p. 596-597.

    Research output: Contribution to conference › Conference abstract for conference › Research

  59. Published

    Comprehensive mapping of GFP structure-function relationship using high-density peptide arrays

    Antonescu, O., Johansson, Kristoffer Enøe & Winther, Jakob R., 10 Jul 2018.

    Research output: Contribution to conference › Poster › Research › peer-review

  60. Published

    3D visualization of air-filled tissues in two flood-prone halophytes reveals contrasting bottlenecks for long-distance O2 transport

    Pellegrini, Elisa, Casolo, V., Boscutti, F., Petruzzellis, F., Nardini, A., Tromba, G. & Pedersen, Ole, 1 Jan 2018.

    Research output: Contribution to conference › Poster › Research

  61. Published

    The Fly Simulator: a simulation model of stable flies and their control

    Nachman, Gøsta Støger & Skovgård, H., 2018, Pests and vector-borne diseases in the livestock industry. Garros, C., Takken, W., Bouyer, J. & Smallegange, R. C. (eds.). Wageningen Academic Publishers, p. 465-494 30 p. (Ecology and Control of Vector-Borne Diseases, Vol. 5).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  62. Published

    Carbon mineral storage in seawater: Ikaite (CaCO3·6H2O) columns in Greenland

    Stockmann, G. J., Ranta, E., Trampe, Erik, Sturkell, E. & Seaman, P., 2018, In: Energy Procedia. 146, p. 59-67 9 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  63. Published

    Flow Injection analysis with microdialysis probes enable minimally invasive and dynamic H2O2 measurements

    Moßhammer, Maria, Koren, K. & Kühl, Michael, 2018, In: Proceedings. 2, 4 p., 992.

    Research output: Contribution to journal › Conference article › Research › peer-review

  64. Published

    Genomic insights into early maritime adaptations in Western Patagonia

    jxb425, jxb425, Moreno Mayar, J. Víctor, Alfonso-Durruty, M., Morello, F., Vilar, M., Wells, S., Campos, P. & Willerslev, Eske, 2018, p. 64. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  65. Published

    Human AQP5 facilitates hydrogen peroxide permeation and improves cell resistance to oxidative stress

    Rodrigues, C., Mósca, A. F., Lopes, D., Pedersen, Per Amstrup, Antunes, F. & Soveral, G., 2018, In: Free Radical Biology and Medicine. 120, Suppl. 1, p. S70 P-86.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  66. Published

    Hyperparasitism in caves: bats, bat flies and ectoparasitic fungus

    Jensen, K. M., Rodrigues, L., Pape, Thomas, Garm, Anders Lydik, Santamaria, S. & Reboleira, Ana Sofia, 2018, In: ARPHA Conference Abstracts. 1, 2 p., e29967.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  67. Published

    Probabilistic Programming for Voucher Information Extraction: Preliminary Practical Experiences

    Al-Sibahi, A. S., Hamelryck, Thomas Wim & Henglein, Fritz, 2018.

    Research output: Contribution to conference › Poster › Research

  68. Published

    Promises and challenges in insect-plant interactions

    Giron, D., Dubreuil, G., Bennett, A., Dedeine, F., Dicke, M., Dyer, L. A., Erb, M., Harris, M. O., Huguet, E., Kaloshian, I., Kawakita, A., Lopez-Vaamonde, C., Palmer, T. M., Petanidou, T., Poulsen, M., Sallé, A., Simon, J-C., Terblanche, J. S., Thiéry, D., Whiteman, N. K. & 2 others, Woods, H. A. & Pincebourde, S., 2018, In: Entomologia Experimentalis et Applicata. 166, 5, p. 319-343

    Research output: Contribution to journal › Conference article › Research › peer-review

  69. 2017
  70. Published

    Remotely controlled fusion of selected vesicles and living cells

    Bahadori, Azra, Rørvig-Lund, A., Semsey, S., Oddershede, L. B. & Bendix, Poul Martin, 15 Dec 2017, In: Proceedings of SPIE. 9922, p. 992211-1

    Research output: Contribution to journal › Conference article › Research › peer-review

  71. Published

    Sensory biology of starfish—with emphasis on recent discoveries in their visual ecology

    Garm, Anders Lydik, Nov 2017, In: Integrative and Comparative Biology. 57, 5, p. 1082-1092 11 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  72. Published

    Mitigating Cyanide Poisoning

    Suman, S. G., Gretarsdottir, J. M., Lambert, Ian Henry & Stürup, Stefan, Jul 2017, p. S261-S261.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  73. Published

    Essential oil profile, phenolic content and antioxidant activity of Geranium kikianum

    Zeljković, S. Ć., Tan, K., Siljak-Yakovlev, S. & Maksimović, M., Feb 2017, In: Natural Product Communications. 12, 2, p. 273-276 4 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  74. Published

    Choreography by Structural Disorder in Membrane Proteins

    Kragelund, Birthe Brandt, 2017, In: Biophysical Society. Annual Meeting. Abstracts. 112, 3, suppl. 1, p. 12A 1 p., 65-Subg.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  75. Published

    Class I Cytokine Receptors: Towards the Inside

    Steinocher, H., Bugge, K. Ø., Nikolajsen, L. F., Lindorff-Larsen, Kresten, Brooks, A. & Kragelund, Birthe Brandt, 2017, In: Biophysical Society. Annual Meeting. Abstracts. 112, 3. Suppl. 1, p. 171A 1 p., 845-Plat.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  76. Published

    Deep Recurrent Conditional Random Field Network for Protein Secondary Prediction

    Johansen, A. R., Sønderby, C. K., Sønderby, S. K. & Winther, O., 2017, ACM-BCB '17: Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. p. 73-78 6 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  77. Published

    Determination of protein turnover in E. coli cells during exit from persistence

    Semanjski, M., Germain-Maisonneuve, E., Gerdes, K. & Macek, B., 2017, In: F A S E B Journal. 31, S1, 1 p., 915.2.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  78. Published

    Discrete structural dynamics of pseudo-palindromic motifs control DNA binding of bacterial toxin-antitoxin complexes

    Brodersen, D. E., Bendtsen, K. L., Xu, K., Luckmann, M., Winther, K. S., Shah, S. A. & Pedersen, C. N. S., 2017, In: F A S E B Journal. 31, S1, 1 p., 777.2.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  79. Published

    Single-Channel Recordings of K+ Channels Expressed in Saccharomyces Cerevisiae

    Tejada, M. D. L. A., Molbaek, K., Cazimi, H., Ellekvist, P., Callø, Kirstine, Nielsen, C. H., Pedersen, Per Amstrup & Klærke, Dan Arne, 2017, In: Biophysical Journal. 112, 3, Suppl. 1, p. 406A 1 p., 2002-Pos Board B322.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  80. 2016
  81. Published

    A bovine in vitro blood-brain barrier model under oxygenglucose deprivation (OGD) condition

    Tornabene, E., Helms, H. C. C., Berndt, P., Blasig, I., Pedersen, Stine Helene Falsig, Waagepetersen, Helle S. & Larsen, Birger Brodin, 2016.

    Research output: Contribution to conference › Poster › Research

  82. Published

    Autoencoding beyond pixels using a learned similarity metric

    Larsen, A. B. L., Sønderby, S. K., Larochelle, H. & Winther, Ole, 2016, Proceedings of The 33rd International Conference on Machine Learning. Balcan, M. F. & Weinberger, K. Q. (eds.). p. 1558–1566 9 p. (JMLR: Workshop and Conference Proceedings, Vol. 48).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  83. Published

    Data from new taxa infer Isoechiniscoides gen. nov. and increase the phylogenetic and evolutionary understanding of echiniscoidid tardigrades (Echiniscoidea: Tardigrada)

    Møbjerg, Nadja, Kristensen, Reinhardt Møbjerg & Jørgensen, Aslak, 2016, In: Linnean Society. Zoological Journal. 178, 4, p. 804-818 15 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  84. Published

    Gene duplications and losses among vertebrate deoxyribonucleoside kinases of the non-TK1 Family

    Mutahir, Z., Christiansen, L. S., Clausen, A. R., Berchtold, Martin Werner, Gojkovic, Z., Munch-Petersen, B., Knecht, W. & Piškur, J., 2016, In: Nucleosides, Nucleotides and Nucleic Acids. 35, 10-12, p. 677-690 14 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  85. Published

    Isolation of a novel protein, P12-from adult Drosophila melanogaster that inhibits deoxyribonucleoside and protein kinase activities and activates 3'-5'-exonuclease activity

    Christiansen, L. S., Zanten, G. V., Berenstein, D., Lauridsen, M., Kjærulff, S., Søndergaard, Leif & Munch-Petersen, B., 2016, In: Nucleosides, Nucleotides and Nucleic Acids. 35, 10-12, p. 699-706 8 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  86. Published

    Ladder variational autoencoders

    Sønderby, C. K., Raiko, T., Maaløe, L., Sønderby, S. K. & Winther, Ole, 2016, Advances in Neural Information Processing Systems 29 (NIPS 2016). Lee, D. D., Sugiyama, M., Luxburg, U. V., Guyon, I. & Garnett, R. (eds.). Curran Associates, Inc., p. 3745-3753 9 p. (Advances in Neural Information Processing Systems, Vol. 29).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  87. Published

    Osmotic stress tolerance in semi-terrestrial tardigrades

    Heidemann, N. W. T., Smith, D. K., Hygum, T. L., Stapane, L., Clausen, L. K. B., Jørgensen, Aslak, Helix-Nielsen, C. & Møbjerg, Nadja, 2016, In: Linnean Society. Zoological Journal. 178, 4, p. 912-918 7 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  88. Published

    Postembryonic development, paedomorphosis, secondary sexual dimorphism and population structure of a new Florarctus species (Tardigrada, Heterotardigrada)

    Hansen, J. G., Kristensen, Reinhardt Møbjerg, Jørgensen, Aslak, Accogli, G., D'Addabbo, R. & Gallo, M., 2016, In: Linnean Society. Zoological Journal. 178, 4, p. 871-877 7 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  89. Published

    Sequential neural models with stochastic layers

    Fraccaro, M., Sønderby, S. K., Paquet, U. & Winther, Ole, 2016, Neural Information Processing Systems 2016. Lee, D. D., Sugiyama, M., Luxburg, U. V., Guyon, I. & Garnett, R. (eds.). Neural Information Processing Systems Foundation, p. 2207-2215 9 p. (Advances in Neural Information Processing Systems, Vol. 29).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  90. Published

    Tun formation is not a prerequisite for desiccation tolerance in the marine tidal tardigrade Echiniscoides sigismundi

    Hygum, T. L., Clausen, L. K. B., Halberg, Kenneth Veland, Jørgensen, Aslak & Møbjerg, Nadja, 2016, In: Linnean Society. Zoological Journal. 178, 4, p. 907-911 5 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  91. 2015
  92. Published

    Gliadin intake alters intestinal microbiota, glucose and lipid metabolism, and adipose tissue and liver immune cells

    Andersen, D., Zhang, L., Roager, H. M., Danneskiold-Samsøe, Niels Banhos, Hansen, Camilla Hartmann Friis, Bahl, M. I., Hansen, Axel Kornerup, Brix, S., Hellgren, L. I. & Licht, T. R., Sep 2015, In: Diabetologia. 58, Supplement 1, p. S314-S314 1 p., 653.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  93. Published

    CSPP-L and EB3 localize to centriolar satellites and are required for satellite-dependent recruitment of ciliopathy proteins to the centrosome

    Sternemalm, J., Geimer, S., Aarnes, E. K., Frikstad, K. M., Stokke, T., Pedersen, Lotte Bang & Patzke, S., 2015, In: Cilia. 4, Suppl. 1, 1 p., P76.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  94. Published

    Convolutional LSTM networks for subcellular localization of proteins

    Sønderby, S. K., Sønderby, C. K., Nielsen, H. & Winther, Ole, 2015, Algorithms for Computational Biology. Dediu, A-H., Hernández-Quiroz, F., Martín-Vide, C. & Rosenblueth, D. A. (eds.). Springer, p. 68-80 13 p. (Lecture notes in computer science, Vol. 9199).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  95. Published

    Coordination of TGFβ/BMP signaling is associated with the primary cilium

    Lindbæk, L., Warzecha, C. B., Koefoed, K., Mogensen, J. B., Schmid, F., Pedersen, Lotte Bang, Larsen, Lars Allan & Christensen, Søren Tvorup, 2015, In: Cilia. 4, Suppl. 1, 1 p., P17.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  96. Published

    Expression of the oncogenic, constitutive active Platelet-Derived Growth Factor Receptor alpha D842V mutant induces loss of primary cilia

    Nielsen, B. S., Schmid, F., Malinda, R., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2015, In: Cilia. 4, Suppl. 1, 1 p., P63.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  97. Published

    Kinesin-3 motor protein KIF13B localizes to centrosomes and primary cilia and regulates ciliary length and signaling

    Schou, K. B., Mogensen, J. B., Aleliunaite, A., Morthorst, Stine Kjær, Veland, I., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2015, In: Cilia. 4, Suppl. 1, 1 p., O3.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  98. Published

    Linking the microbial community processes to the contamination by priority organic substances: in situ observations on coastal sediments of the Adriatic Sea (Italy)

    Zoppini, A., Ademollo, N., Amalfitano, S., Dellisanti, Walter, Lungarini, S., Miserocchi, S., Patrolecco, L. & Langone, L., 2015, Proceedings PERSEUS Scientific Conference “Integrated Marine Research in the Mediterranean and the Black Sea”. Brussels. p. 7-9 3 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  99. Published

    Microbial processes and organic priority substances in marine coastal sediments (Adriatic Sea, Italy)

    Zoppini, A., Ademollo, N., Amalfitano, S., Dellisanti, Walter, Lungarini, S., Miserocchi, S., Patrolecco, L. & Langone, L., 2015, EGU General Assembly Conference Abstracts. p. 10443 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  100. Published

    The more we know, the more we have to discover: an exciting future for understanding cilia and ciliopathies

    Benmerah, A., Durand, B., Giles, R. H., Harris, T., Kohl, L., Laclef, C., Meilhac, S. M., Mitchison, H. M., Pedersen, Lotte Bang, Roepman, R., Swoboda, P., Ueffing, M. & Bastin, P., 2015, In: Cilia. 4, 5, 14 p.

    Research output: Contribution to journal › Conference article › Research

  101. Published

    What does evolution tell us about the structure of a functional amyloid protein?

    Tian, P., Boomsma, Wouter, Wang, Y., Otzen, D. E., Jensen, Mogens Høgh & Lindorff-Larsen, Kresten, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 227a 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  102. 2014
  103. Published

    Binding of Cu2+ to the islet amyloid polypeptide (IAPP)

    Andersen-Usaj, J., Bonde, A. C., Pihl, J., Thomsen, M. F., Shavit, M., Pedersen, J. T., Teilum, Kaare, Thulstrup, Peter Waaben & Hemmingsen, Lars Bo Stegeager, 2014, In: Journal of Biological Inorganic Chemistry. 19, suppl. 2, p. S812 1 p., P 101.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  104. Published

    CECAM workshop on intrinsically disordered proteins

    Rösner, Heike Ilona, Papaleo, E., Haxholm, G. W., Best, R. B., Kragelund, Birthe Brandt & Lindorff-Larsen, Kresten, 2014, In: Intrinsically Disordered Proteins. 2, 1, p. 1-5 5 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  105. Published

    Direct and diffuse light propagation through coral tissue

    Wangpraseurt, D. & Kühl, Michael, 2014, SPIE Proceedings. Jansen, E. D., Thomas, R. J., Wilmink, G. J. & Ibey, B. L. (eds.). SPIE - International Society for Optical Engineering, Vol. 8941. 6 p. (SPIE Proceedings, Vol. 8941).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  106. Published

    Fine-structural organization and phylogenetic affinities of Peridiniopsis polonica (Dinophyceae): evidence for a new genus

    Craveiro, S. C., Daugbjerg, Niels, Moestrup, Øjvind & Calado, A. J., 2014. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  107. Published

    Islet amyloid polypeptide (IAPP)-Structural effects of Zn2+

    Shavit, M., Bonde, A. C., Pihl, J., Thomsen, M. F., Pedersen, J. T., Andersen-Usaj, J., Teilum, Kaare, Hemmingsen, Lars Bo Stegeager & Thulstrup, Peter Waaben, 2014, In: Journal of Biological Inorganic Chemistry. 19, Suppl. 2, p. S813 1 p., P 102.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  108. Published

    pH dependence of amyloid-β-Cu(II) binding and oligomerization kinetics

    Pedersen, J. T., Borg, C. B., Teilum, Kaare & Hemmingsen, Lars Bo Stegeager, 2014, In: Journal of Biological Inorganic Chemistry. 19, Suppl 2, p. S755 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  109. 2013
  110. Published

    Emerging risk for leishmaniosis in north-eastern Italy: preliminary results of a 12-years entomological survey

    Signorini, M., Pietrobelli, M., Stensgaard, Anna-Sofie, Babiker, A., Marcer, F., Montarsi, F. & Cassini, R., Sep 2013, In: Tropical Medicine & International Health. 18, Supplement s1, p. 136-136 1 p., P.1.4.9.018 (B).

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  111. Published

    Exploring patterns and distributions of parasite intermediate host snails in Africa using climate-based species distribution modelling

    Stensgaard, Anna-Sofie & Kristensen, T. K., Sep 2013, In: Tropical Medicine & International Health. 18, s1, p. 104-105 2 p., O.6.8.1.001.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  112. Published

    Newly isolated Chl d-containing cyanobacteria

    Li, Y., Larkum, A., Schliep, M., Kühl, Michael, Neilan, B. & Chen, M., 28 Feb 2013, Photosynthesis Research for Food, Fuel and Future: 15th International Conference on Photosynthesis. Kuang, T., Lu, C. & Zhang, L. (eds.). Springer Science+Business Media, p. 686-690 5 p. (Advanced Topics in Science and Technology in China).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

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