Department of Biology

 

 
  1. 2023
  2. Published

    Underestimated Interannual Variability of Terrestrial Vegetation Production by Terrestrial Ecosystem Models

    Lin, S., Hu, Z., Wang, Y., Chen, X., He, B., Song, Z., Sun, S., Wu, C., Zheng, Y., Xia, X., Liu, L., Tang, Jing, Sun, Q., Joos, F. & Yuan, W., 2023, In: Global Biogeochemical Cycles. 37, 4, 15 p., e2023GB007696.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    The genomic landscape of reference genomes of cultivated human gut bacteria

    Lin, X., Hu, T., Chen, J., Liang, H., Zhou, J., Wu, Z., Ye, C., Jin, X., Xu, X., Zhang, W., Jing, X., Yang, T., Wang, J., Yang, H., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: Nature Communications. 14, 1, 11 p., 1663.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Cationic amphiphilic antihistamines inhibit STAT3 via Ca2+-dependent lysosomal H+ efflux

    Liu, B., Chen, R., Zhang, Y., Huang, J., Luo, Y., Rosthøj, Susanne, Zhao, C. & Jaattela, Marja, 2023, In: Cell Reports. 42, 2, 20 p., 112137.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Integrative genetic and single cell RNA sequencing analysis provides new clues to the amyotrophic lateral sclerosis neurodegeneration

    Liu, H., Guan, Liping, Deng, M., Bolund, L., Kristiansen, Karsten, Zhang, J., Luo, Y. & Zhang, Z., 2023, In: Frontiers in Neuroscience. 17, 10 p., 1116087.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Development of a novel SRAP-SCAR marker for rapid identification of lager and ale types in brewer's yeast

    Liu, J., Cai, G., Li, X. & Lu, J., 2023, In: Molecular Biology Reports. 50, 6 p.

    Research output: Contribution to journalLetterResearchpeer-review

  7. Published

    Mendelian randomization analyses reveal causal relationships between the human microbiome and longevity

    Liu, X., Zou, L., Nie, C., Qin, Y., Tong, X., Wang, J., Yang, H., Xu, X., Jin, X., Xiao, L., Zhang, T., Min, J., Zeng, Y., Jia, H. & Hou, Y., 2023, In: Scientific Reports. 13, 1, 13 p., 5127.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Sex differences in the oral microbiome, host traits, and their causal relationships

    Liu, X., Tong, X., Jie, Z., Zhu, J., Tian, L., Sun, Q., Ju, Y., Zou, L., Lu, H., Qiu, X., Li, Q., Liao, Y., Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J., Wang, R. & 11 others, Xu, X., Yang, H., Wang, J., Zong, Y., Liu, W., Hou, Y., Jin, X., Xiao, L., Kristiansen, Karsten, Jia, H. & Zhang, T., 2023, In: iScience. 26, 1, 23 p., 105839.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    The C:N: P stoichiometry in bryophytes: relationships with habitat, climate and growth form

    Liu, X., Wang, Z., Li, X., Bao, W. & Rousk, Kathrin, 2023, In: National Science Review. 10, 4, 3 p., nwad060.

    Research output: Contribution to journalLetterResearchpeer-review

  10. Published

    Allometric relationships between leaf and petiole traits across 31 floating-leaved plants reveal a different adaptation pattern from terrestrial plants

    Liu, Y., Liu, H., Båstrup-Spohr, Lars, Li, Z., Li, W., Pan, J. & Cao, Y., 2023, In: Annals of Botany. 131, 3, 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Clinical diagnosis of genetic disorders at both single-nucleotide and chromosomal levels based on BGISEQ-500 platform

    Liu, Y., Mao, L., Huang, H., Li, W., Man, J., Zhang, W., Wang, L., Li, L., Sun, Y., Zhai, T., Guo, X., Du, L., Huang, J., Li, H., Wan, Y. & Wei, X., 2023, In: Human Genome Variation. 10, 1, 43 p., 15.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Variational Open-Domain Question Answering

    Liévin, V., Motzfeldt, A. G., Jensen, I. R. & Winther, Ole, 2023, In: Proceedings of Machine Learning Research. 202, p. 20950-20977 28 p.

    Research output: Contribution to journalConference articleResearchpeer-review

  13. Published

    The Drosophila tumor necrosis factor receptor, Wengen, couples energy expenditure with gut immunity

    Loudhaief, Rihab, Jneid, Rouba, Christensen, Christian Fokdal, Mackay, Duncan John, Andersen, Ditte Skovaa & Colombani, Julien, 2023, In: Science Advances. 9, 23, 15 p., eadd4977.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters

    Louis, Marie Georgette Yolande J, Korlević, P., Nykänen, M., Archer, F., Berrow, S., Brownlow, A., Lorenzen, Eline, O'Brien, J., Post, K., Racimo, Fernando, Rogan, E., Rosel, P. E., Sinding, Mikkel Holger Strander, van der Es, H., Wales, N., Fontaine, M. C., Gaggiotti, O. E. & Foote, A. D., 2023, In: Nature Communications. 14, 13 p., 4020.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published
  16. Published

    Phagotrophic Protists Modulate Copper Resistance of the Bacterial Community in Soil

    Lv, Z., Xu, M., Liu, Y., Rønn, Regin, Rensing, C., Liu, S., Gao, S., Liao, H., Liu, Y. R., Chen, W., Zhu, Y. G., Huang, Q. & Hao, X., 2023, In: Environmental Science and Technology. 57, 9, p. 3590-3601 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Soil aggregates affect the legacy effect of copper pollution on the microbial communities

    Lv, Z., Rønn, Regin, Liao, H., Rensing, C., Chen, W., Huang, Q. & Hao, X., 2023, In: Soil Biology and Biochemistry. 182, 10 p., 109048.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Non-invasive investigation of the morphology and optical properties of the upside-down jellyfish Cassiopea with optical coherence tomography

    Lyndby, N. H., Murthy, Swathi, Bessette, S., Jakobsen, S. L., Meibom, A. & Kühl, Michael, 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2007, 11 p., 20230127.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    The mesoglea buffers the physico-chemical microenvironment of photosymbionts in the upside-down jellyfish Cassiopea sp.

    Lyndby, N. H., Murray, M. C., Trampe, Erik, Meibom, A. & Kühl, Michael, 2023, In: Frontiers in Ecology and Evolution. 11, 12 p., 1112742.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Regulation of plant immunity via small RNA-mediated control of NLR expression

    López Márquez, Diego, Del-Espino, Á., Ruiz-Albert, J., Bejarano, E. R., Brodersen, Peter & Beuzón, C. R., 2023, In: Journal of Experimental Botany. 74, 19, p. 6052-6068 17 p.

    Research output: Contribution to journalReviewResearchpeer-review

  21. Published

    Draft genomes of seven isolates from Danish wastewater facilities belonging to Pseudomonas, Bacillus, Pseudochrobactrum, Brevundimonas, and Pandoraea

    Maccario, Lorrie, Silva, A. F., Nesme, Joseph, Amador Hierro, Cristina Isabel, Sørensen, Søren Johannes, Cooper, V. S. & Røder, Henriette Lyng, 2023, In: Microbiology resource announcements. 12, 12, 4 p.

    Research output: Contribution to journalLetterResearchpeer-review

  22. Published

    Progesterone distribution in the trigeminal system and its role to modulate sensory neurotransmission: influence of sex

    Maddahi, A., Warfvinge, K., Holm, A., Edvinsson, J. C. A., Reducha, Philip Victor, Kazantzi, Spyridoula, Haanes, Kristian Agmund & Edvinsson, L., 2023, In: Journal of Headache and Pain. 24, 1, 16 p., 154.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Den danske checkliste over bier er blevet opdateret

    Madsen, Henning Bang, Calabuig, Isabel & Rasmussen, C., 2023

    Research output: Other contributionNet publication - Internet publicationCommunication

  24. Published

    Molecular insights into alginate beta-lactoglobulin A multivalencies: The foundation for their amorphous aggregates and coacervation

    Madsen, M., Prestel, Andreas, Madland, E., Westh, P., Tondervik, A., Sletta, H., Peters, G. H. J., Aachmann, F. L. L., Kragelund, Birthe Brandt & Svensson, B., 2023, In: Protein Science. 32, 2, 15 p., 4556.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Fission yeast Swi2 designates cell-type specific donor and stimulates Rad51-driven strand exchange for mating-type switching

    Maki, T., Thon, Genevieve & Iwasaki, H., 2023, In: Nucleic acids symposium series. 51, 8, 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. E-pub ahead of print

    Carbon and nitrogen uptake through photosynthesis and feeding by photosymbiotic Acantharia

    Mansour, J. S., Hansen, Per Juel, Leroux, C. & Not, F., 2023, (E-pub ahead of print) In: Open Research Europe.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Environmental predictors of lake fish diversity across gradients in lake age and spatial scale

    Martinsen, Kenneth Thorø, Kristensen, E., Båstrup-Spohr, Lars, Søndergaard, M., Carl, Henrik, Jeppesen, E., Sand-Jensen, Kaj & Kragh, T., 2023, In: Freshwater Biology. 68, 7, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Predicting lake bathymetry from the topography of the surrounding terrain using deep learning

    Martinsen, Kenneth Thorø, Sand-Jensen, Kaj & Selvan, Raghav, 2023, In: Limnology and Oceanography: Methods. 21, 10, p. 625-636

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Plant YTHDF proteins are direct effectors of antiviral immunity against an N6-methyladenosine-containing RNA virus

    Martínez-Pérez, M., Aparicio, F., Arribas Hernandez, Laura, Tankmar, Mathias Due, Rennie, Sarah, von Bülow, Sören, Lindorff-Larsen, Kresten, Brodersen, Peter & Pallas, V., 2023, In: EMBO Journal. 42, 18, 17 p., e113378.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Effects of Glacial Flour on Marine Micro-plankton: Evidences from Natural Communities of Greenlandic Fjords and Experimental Studies

    Maselli, Maira, Meire, L., Meire, P. & Hansen, Per Juel, 2023, In: Protist. 174, 1, 17 p., 125928.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Redox state and altered pyruvate metabolism contribute to a dose-dependent metformin-induced lactate production of human myotubes

    Maurer, J., Zhao, X., Irmler, M., Gudiksen, Anders, Pilmark, N. S., Li, Q., Goj, T., Beckers, J., Hrabě De Angelis, M., Birkenfeld, A. L., Peter, A., Lehmann, R., Pilegaard, Henriette, Karstoft, Kristian, Xu, G. & Weigert, C., 2023, In: American Journal of Physiology: Cell Physiology. 325, 4, p. C1131-C1143 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Strain-specific quorum-sensing responses determine virulence properties in Vibrio anguillarum

    Mauritzen, Jesper Juel, Søndberg, E., Kalatzis, Panagiotis, Roager, L., Gram, L., Svenningsen, Sine Lo & Middelboe, Mathias, 2023, In: Environmental Microbiology. 25, 7, 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    A host of armor: Prokaryotic immune strategies against mobile genetic elements

    Mayo-Muñoz, D., Pinilla Redondo, Rafael, Birkholz, N. & Fineran, P. C., 2023, In: Cell Reports. 42, 7, 14 p., 112672.

    Research output: Contribution to journalReviewResearchpeer-review

  34. Published

    The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics

    Mc Cartney, A. M., Formenti, G., Mouton, A., Panis, D. D., Marins, L. S., Leitão, H. G., Diedericks, G., Kirangwa, J., Morselli, M., Salces-Ortiz, J., Escudero, N., Iannucci, A., Natali, C., Svardal, H., Fernández, R., Pooter, T. D., Joris, G., Strazisar, M., Wood, J., Herron, K. E. & 30 others, Seehausen, O., Watts, P. C., Shaw, F., Davey, R. P., Minotto, A., Fernández, J. M., Böhne, A., Alegria, C., Alioto, T., Alves, P. C., Amorim, I. R., Aury, J., Backstrom, N., Baldrian, P., Baltrunaite, L., Barta, E., Bed’Hom, B., Belser, C., Bergsten, J., Bertrand, L., Bilandžija, H., Binzer-Panchal, M., Bista, I., Blaxter, M., Borges, P. A., Dias, G. B., Bosse, M., Garg, S., Madsen, O. & Stiller, Josefin, 2023, 51 p. (bioRxiv).

    Research output: Working paperPreprintResearch

  35. Published

    Pooled analysis of frontal lobe transcriptomic data identifies key mitophagy gene changes in Alzheimer's disease brain

    Mei, T., Li, Yuan, Orduña Dolado, A., Li, Zhiquan, Andersson, Robin, Berliocchi, Laura & Rasmussen, Lene Juel, 2023, In: Frontiers in Aging Neuroscience. 15, 14 p., 1101216.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    When gluttony strikes: how high-fat diet impairs hepatic Ca2+ signalling

    Merrild, C. & Johansen, Valdemar Brimnes Ingemann, 2023, In: Journal of Physiology. 601, 12, p. 2245-2247

    Research output: Contribution to journalComment/debateResearchpeer-review

  37. Published

    Primary cilia as dynamic and diverse signalling hubs in development and disease

    Mill, P., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2023, In: Nature Reviews. Genetics. 24, 21 p.

    Research output: Contribution to journalReviewResearchpeer-review

  38. Published

    The Mixoplankton Database (MDB): Diversity of photo‐phago‐trophic plankton in form, function, and distribution across the global ocean

    Mitra, A., Caron, D. A., Faure, E., Flynn, K. J., Leles, S. G., Hansen, Per Juel, McManus, G. B., Not, F., Rosario Gomes, H. D., Santoferrara, L. F., Stoecker, D. K. & Tillmann, U., 2023, In: Journal of Eukaryotic Microbiology. 70, 4, 25 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    High nutrient loads hinder successful restoration of natural habitats in freshwater wetlands

    Moeslund, J. E., Andersen, D. K., Brunbjerg, A. K., Bruun, Hans Henrik, Fløjgaard, C., McQueen, S. N., Nygaard, B. & Ejrnæs, R., 2023, In: Restoration Ecology. 31, 7, 13 p., e13796.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Microplastic pollution associated with reduced respiration in seagrass (Zostera marina L.) and associated epiphytes

    Molin, J. M., Groth-Andersen, W. E., Hansen, Per Juel, Kühl, Michael & Brodersen, Kasper Elgetti, 2023, In: Frontiers in Marine Science. 10, 14 p., 1216299.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Plasmid permissiveness of wastewater microbiomes can be predicted from 16S rRNA sequences by machine learning

    Moradigaravand, D., Li, L., Dechesne, A., Nesme, Joseph, de la Cruz, R., Ahmad, H., Banzhaf, M., Sørensen, Søren Johannes, Smets, B. F. & Kreft, J. U., 2023, In: Bioinformatics (Oxford, England). 39, 7, 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Benchmarking RNA Editing Detection Tools

    Morales, D. R., Rennie, Sarah & Uchida, S., 2023, In: BioTech. 12, 3, 18 p., 56.

    Research output: Contribution to journalReviewResearchpeer-review

  43. Published

    The genetic background of hydrocephalus in a population-based cohort: implication of ciliary involvement

    Munch, Tina Nørgaard, Hedley, P. L., Hagen, C. M., Baekvad-Hansen, M., Geller, F., Bybjerg-Grauholm, J., Nordentoft, Merete, Borglum, A. D., Werge, Thomas, Melbye, M., Hougaard, D. M., Larsen, Lars Allan, Christensen, Søren Tvorup & Christiansen, M., 2023, In: Brain Communications. 5, 1, 14 p., fcad004.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Impact of Microbial Symbionts on Fungus-Farming Termites and Their Derived Ecosystem Functions

    Murphy, Rob, Sinotte, Veronica Marie, Schmidt, Suzanne, Li, Guangshuo, Hamilton Renalias, J., Koné, N. A. & Poulsen, Michael, 2023, Assessing the Microbiological Health of Ecosystems. Hurst, C. J. (ed.). Wiley, p. 185-203

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  45. Published

    RibDif2: expanding amplicon analysis to full genomes

    Murphy, Rob & Strube, M. L., 2023, In: Bioinformatics Advances. 3, 1, 5 p., vbad111.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Modeling the radiative, thermal and chemical microenvironment of 3D scanned corals

    Murthy, Swathi, Picioreanu, C. & Kühl, Michael, 2023, In: Frontiers in Marine Science. 10, 17 p., 1160208.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Molecular Characterization and Morpho-Taxonomy of Gambierdiscus caribaeus Vandersea, Litaker, M.A.Faust, Kibler, W.C.Holland & P.A.Tester (Dinophyceae) from Mauritius Island, South-West Indian Ocean

    Mussai, P., Larsen, Jacob & Jeewon, R., 2023, In: Cryptogamie, Algologie. 44, 1, p. 1-11 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Ribosomal DNA Sequence-Based Taxonomy and Antimicrobial Activity of Prorocentrum spp. (Dinophyceae) from Mauritius Coastal Waters, South-West Indian Ocean

    Mussai, P., Larsen, Jacob, Alrefaei, A. F. & Jeewon, R., 2023, In: Marine Drugs. 21, 4, 16 p., 216.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Flood-tolerant rice for enhanced production and livelihood of smallholder farmers of Africa

    Mwakyusa, L., Dixit, S., Herzog, Max, Heredia, M. C., Madege, R. R. & Kilasi, N. L., 2023, In: Frontiers in Sustainable Food Systems. 7, 13 p., 1244460.

    Research output: Contribution to journalReviewResearchpeer-review

  50. Published

    Screening of potential donors for anaerobic stress tolerance during germination in rice

    Mwakyusa, L., Heredia, M. C., Kilasi, N. L., Madege, R. R., Herzog, Max & Dixit, S., 2023, In: Frontiers in Plant Science. 14, 13 p., 1261101.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    High-resolution crystal structure of the Mu8.1 conotoxin from Conus mucronatus

    Müller, E., Hackney, Celeste Menuet, Ellgaard, Lars & Morth, J. P., 2023, In: Acta crystallographica. Section F, Structural biology communications. 79, 9, p. 240-246 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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