Department of Biology

 

 
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  1. Published

    Structural basis for kinase inhibition in the tripartite E. coli HipBST toxin-antitoxin system

    Bærentsen, R. L., Nielsen, S. V., Skjerning, R. B., Lyngsø, J., Bisiak, F., Pedersen, J. S., Gerdes, K., Sørensen, Michael Askvad & Brodersen, D. E., 2023, In: eLife. 12, 20 p., RP90400.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Single-cell Analysis of Lambda Immunity Regulation

    Bæk, K. T., Svenningsen, Sine Lo, Eisen, H., Sneppen, Kim & Brown, Stanley, 2003, In: Journal of Molecular Biology. 334, 3, p. 363-372 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Overfladefilm på søer : et ekstremt miljø

    Båstrup-Spohr, Lars & Stæhr, P. A., 2008, In: Vand og Jord. 4, p. 151-154

    Research output: Contribution to journal › Journal article › Research

  4. Published

    Økologisk restaurering af Øle Å med afsæt i forskningsmål og effektmålinger

    Båstrup-Spohr, Lars, Sand-Jensen, Kaj, Morsing, J., Martinsen, K. T., Larsen, Jørgen Bo & Raulund-Rasmussen, Karsten, 2015, In: Vand & Jord. 22, 3, p. 105-109 5 p.

    Research output: Contribution to journal › Journal article › Communication

  5. Published

    Seventy years of changes in the abundance of Danish charophytes

    Båstrup-Spohr, Lars, Iversen, L. L., Dahl-Nielsen, J. & Sand-Jensen, Kaj, 2013, In: Freshwater Biology. 58, 8, p. 1682-1693 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Distribution and functional traits of charophytes and vascular plants: biodiversity in aquatic systems and along flooding gradients

    Båstrup-Spohr, Lars, 2013, Department of Biology, Faculty of Science, University of Copenhagen. 131 p.

    Research output: Book/Report › Ph.D. thesis › Research

  7. Published

    Vandplanternes artsrigdom og udbredelse i nye søer

    Båstrup-Spohr, Lars, Sø, Jonas Stage, Martinsen, K. T., Zak, N. B., Kristensen, E., Kragh, T., Søndergaard, M., Borum, Jens & Sand-Jensen, Kaj, 2020, In: Vand & Jord. 27, 4, p. 151-155 5 p.

    Research output: Contribution to journal › Journal article › Communication

  8. Published

    Remarkable richness of aquatic macrophytes in 3-years old re-established Lake Fil, Denmark

    Båstrup-Spohr, Lars, Kragh, T., Petersen, K., Moeslund, B., Schou, J. C. & Sand-Jensen, Kaj, 2016, In: Ecological Engineering. 95, p. 375-383 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Phenylpropanoid Metabolism Induced by Wounding and Insect Herbivory

    Båstrup-Spohr, Lars, 2008, Induced plant resistance to herbivory.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  10. Published

    Water-level fluctuations affect sediment properties, carbon flux and growth of the isoetid Littorella uniflora in oligotrophic lakes

    Båstrup-Spohr, Lars, Møller, C. L. & Sand-Jensen, Kaj, 2016, In: Freshwater Biology. 61, 3, p. 301-315 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Miraklerne fortsætter i Filsø

    Båstrup-Spohr, Lars, Kragh, T., Moeslund, B., Schou, J. C., Aaby, B. & Sand-Jensen, Kaj, 2015, In: URT. 39, 4, p. 128-133 6 p.

    Research output: Contribution to journal › Journal article › Communication

  12. Published

    From soaking wet to bone dry: predicting plant community composition along a steep hydrological gradient

    Båstrup-Spohr, Lars, Sand-Jensen, Kaj, Nicolajsen, S. V. & Bruun, Hans Henrik, 2015, In: Journal of Vegetation Science. 26, 4, p. 619-630 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Recovery of lake vegetation following reduced eutrophication and acidification

    Båstrup-Spohr, Lars, Sand-Jensen, Kaj, Olesen, S. C. H. & Bruun, Hans Henrik, Nov 2017, In: Freshwater Biology. 62, 11, p. 1847-1857 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Kransnålalger rummer mange truede arter

    Båstrup-Spohr, Lars, Dahl-Nielsen, J. & Sand-Jensen, Kaj, 2013, In: URT. 37, 2, p. 66-70 5 p.

    Research output: Contribution to journal › Journal article › Communication

  15. Published

    Niche specialization and functional traits regulate the rarity of charophytes in the Nordic countries

    Båstrup-Spohr, Lars, Iversen, L. L., Borum, Jens & Sand-Jensen, Kaj, 2015, In: Aquatic Conservation: Marine and Freshwater Ecosystems. 25, 5, p. 609-621 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Surface microlayers on temperate lowland lakes

    Båstrup-Spohr, Lars & Stæhr, P. A., 2009, In: Hydrobiologia. 625, 1, p. 43-59

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Guidelines for mitochondrial DNA typing. DNA Commission of the International Society for Forensic Genetics

    Bär, W., Brinkmann, B., Budowle, B., Carracedo, A., Gill, P., Holland, M., Lincoln, P. J., Mayr, W., Morling, Niels, Olaisen, B., Schneider, P. M., Tully, G. & Wilson, M., 2000, In: Vox Sanguinis. 79, 2, p. 121-5 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Dynamics and stabilization of the human gut microbiome during the first year of life

    Bäckhed, G. F., Roswall, J., Peng, Y., Feng, Q., Jia, H., Kovatcheva-Datchary, P., Li, Y., Xia, Y., Xie, H., Zhong, H., Khan, M. T., Zhang, J., Li, J., Xiao, L., Al-Aama, J., Zhang, D., Lee, Y. S., Kotowska, D. E., Colding, C. S., Tremaroli, V. & 7 others, Yin, Y., Bergman, S., Xu, X., Madsen, L., Kristiansen, Karsten, Dahlgren, J. & Wang, J., 2015, In: Cell Host & Microbe. 17, 5, p. 690-703 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The dynamic landscape of peptide activity prediction

    Bárcenas, O., Pintado-Grima, C., Sidorczuk, K., Teufel, Felix Georg, Nielsen, H., Ventura, S. & Burdukiewicz, M., 2022, In: Computational and Structural Biotechnology Journal. 20, p. 6526-6533 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  20. Published

    Conversion of cropland to forest increases soil CH4 oxidation and abundance of CH4 oxidizing bacteria with stand age

    Bárcena, T. G., D'Imperio, Ludovica, Gundersen, Per, Vesterdal, Lars, Priemé, Anders & Christiansen, Jesper Riis, 2014, In: Applied Soil Ecology. 79, p. 49-58 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Barley Rhizosphere Microbiome Transplantation: A Strategy to Decrease Susceptibility of Barley Grown in Soils With Low Microbial Diversity to Powdery Mildew

    Bziuk, N., Maccario, Lorrie, Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2022, In: Frontiers in Microbiology. 13, 14 p., 830905.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Tillage shapes the soil and rhizosphere microbiome of barley - but not its susceptibility towards Blumeria graminis f. sp. hordei

    Bziuk, N., Maccario, Lorrie, Douchkov, D., Lueck, S., Babin, D., Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    The treasure inside barley seeds: microbial diversity and plant beneficial bacteria

    Bziuk, N., Maccario, Lorrie, Straube, B., Wehner, G., Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2021, In: Environmental Microbiomes. 16, 21 p., 20.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Hidden Markov models for prediction of protein features.

    Bystroff, C. & Krogh, Anders, 2008, In: Methods in Molecular Biology. 413, p. 173-98 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    No evidence for the presence of oogonia in the human ovary after their final clearance during the first two years of life

    Byskov, A. G., Høyer, P. E., tcg964, tcg964, Kristensen, S. G., Jespersen, Å. & Møllgård, Kjeld, 2011, In: Human Reproduction. 26, 8, p. 2129-2139 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Insekter i farver

    Bygebjerg, R., Calabuig, I., Damgaard, J., Gønget, H., Hansen, H. I. Ø., Jensen, F., Madsen, Henning Bang, Munk, T., Nielsen, O. F., Pape, T., Petersen, H., Schmidt, J. B., Simonsen, T. J., Torp-Petersen, F., Wiberg-Larsen, P. & Sangild, S. (ed.), 2007, Politikens Forlag. 232 p.

    Research output: Book/Report › Book › Communication

  27. Published

    Specific proliferative response of human lymphocytes to purified soluble antigens from Plasmodium falciparum in vitro cultures and to antigens from malaria patients' sera

    Bygbjerg, Ib Christian, Jepsen, S., Theander, Thor Grundtvig & Ødum, Niels, 1985, In: Clinical and Experimental Immunology. 59, 2, p. 421-6 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Effect of pyrimethamine and sulphadoxine on human lymphocyte proliferation

    Bygbjerg, Ib Christian, Ødum, Niels & Theander, Thor Grundtvig, 1986, In: Transactions of the Royal Society of Tropical Medicine and Hygiene. 80, 2, p. 295-300 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Opposite risk patterns for autism and schizophrenia are associated with normal variation in birth size: phenotypic support for hypothesized diametric gene-dosage effects

    Byars, Sean Geoffrey, Stearns, S. C. & Boomsma, Jacobus J., 2014, In: Proceedings of the Royal Society B: Biological Sciences. 281, 1794, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Commentary: Haldanes and trends in phenotypic change in humans

    Byars, Sean Geoffrey, 2013, In: International Journal of Epidemiology. 42, 1, p. 295-297 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  31. Published

    Association of Long-term Risk of Respiratory, Allergic, and Infectious Diseases With Removal of Adenoids and Tonsils in Childhood

    Byars, Sean Geoffrey, Stearns, S. C. & Boomsma, Jacobus J., Jul 2018, In: J A M A Otolaryngology. Head & Neck Surgery. 144, 7, p. 594-603 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Limitations to the Association of Risk of Airway Disease with Removal of Adenoids and Tonsils in Children - Reply

    Byars, Sean Geoffrey, Stearns, S. C. & Boomsma, Jacobus J., 2018, In: JAMA Otolaryngology - Head and Neck Surgery. 144, 12, p. 1188-1189

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  33. Published

    Perianth development in the basal monocot Triglochin maritima (Juncaginaceae)

    Buzgo, M., Soltis, D. E., Soltis, P. S., Kim, S., Ma, H., Hauser, B. A., Leebens-Mack, J. & Johansen, B., 2006, In: Aliso. 22, p. 107-125

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Searching for Podaxis on the trails of early explorers in southern Africa

    Buys, M., Conlon, B., de Fine Licht, Henrik Hjarvard, Aanen, D. K., Poulsen, Michael & De Beer, Z. W., 2018, In: South African Journal of Botany. 115, p. 317 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Collecting the neclected kingdom: Guidelines for the field mycologist with emphasis on the larger fungi: Chapter 12.

    Buyck, B., Læssøe, Thomas, Meyer, M. & Hoffstetter, V., 2010, In: Abc Taxa. 8, p. 308-330

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Bekæmpelse af blåtop på heder

    Buttenschøn, Rita M., Degn, H. J., Naturconsult, D., Jørgensen, S. & skovdistrikt, R., 2004, In: Videnblade Park og Landskab. 6.1-14, 2 p.

    Research output: Contribution to journal › Journal article › Communication

  37. Published

    Regulering af lysesiv

    Buttenschøn, Rita M., Nielsen, L. & Landbrug, N. &., 2004, In: Videnblade Park og Landskab. 6.2-13, 2 p.

    Research output: Contribution to journal › Journal article › Communication

  38. Published

    Husdyr og vildt som naturplejere - er de lige gode naturplejere, og holder husdyr vildtet væk?

    Buttenschøn, Rita M., Madsen, T. L., Madsen, P. & Olesen, C. R., 2009, Vildt & landskab: resultater af 6 års integreret forskning i Danmark 2003-2008. Kanstrup, N., Asferg, T., Flinterup, M., Thorsen, B. J. & Jensen, T. S. (eds.). Miljøministeriet, Skov- og Naturstyrelsen, p. 88-91 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

  39. Published

    Amternes naturpleje: - rapport fra en erfaringsopsamling

    Buttenschøn, Rita M. & Hansen, B., 1998, Forskningscentret for Skov & Landskab. 103 p. (Park- og Landskabsserien; No. 21).

    Research output: Book/Report › Report › Research

  40. Published

    Kvæggræsning og rådyr

    Buttenschøn, Rita M. & Madsen, T. L., 2006, In: Videnblade Park og Landskab. 6.0-24

    Research output: Contribution to journal › Journal article › Communication

  41. Published

    Effekten af græsning på skovbryn, skov og skovetablering

    Buttenschøn, Rita M., Madsen, T. L., Madsen, P. & Olesen, C. R., 2009, Vildt & landskab: resultater af 6 års integreret forskning i Danmark 2003-2008. Kanstrup, N., Asferg, T., Flinterup, M., Thorsen, B. J. & Jensen, T. S. (eds.). Miljøministeriet, Skov- og Naturstyrelsen, p. 92-95 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

  42. Published

    Sharing future conservation costs - response

    Butchart, S. H. M., Mccarthy, D. P., Balmford, A., Bennun, L. A., Buchanan, G. M., Burgess, Neil David, Donald, P. F., Fishpool, L. D. C., Garnett, S. T., Leonard, D. L., Maloney, R. F., Schaefer, H. M., Scharlemann, J. P. W., Symes, A. & Wiedenfeld, D. A., 2013, In: Science. 339, 6117, p. 271-272 2 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  43. Published

    Protecting important sites for biodiversity contributes to meeting global conservation targets

    Butchart, S. H. M., Scharlemann, J. P. W., Evans, M. I., Quader, S., Aricó, S., Arinaitwe, J., Balman, M., Bennun, L. A., Bertzky, B., Besancon, C., Boucher, T. M., Brooks, T. M., Burfield, I. J., Burgess, N. D., Chan, S., Clay, R. P., Crosby, M. J., Davidson, N. C., De Silva, N., Devenish, C. & 23 others, Dutson, G. C. L., Fernández, D. F. D. Z., Fishpool, L. D. C., Fitzgerald, C., Foster, M., Heath, M. F., Hockings, M., Hoffmann, M., Knox, D., Larsen, F. W., Lamoreux, J. F., Loucks, C., May, I., Millett, J., Molloy, D., Morling, P., Parr, M., Ricketts, T. H., Seddon, N., Skolnik, B., Stuart, S. N., Upgren, A. & Woodley, S., 2012, In: PLOS ONE. 7, 3, 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Natural selection on protein-coding genes in the human genome

    Bustamente, C. D., Fledel-Alon, A., Williamson, S., Nielsen, Rasmus, Hubisz, M., Glanowski, S., Tanenbaum, D. M., White, T. J., Sninsky, J. J., Hernandez, R. D., Civello, D., Adams, M. D., Cargill, M. & Clark, A. G., 2005, In: Nature. 437, 7062, p. 1153-1157

    Research output: Contribution to journal › Letter › Research

  45. Published

    Phylogenetic analysis of Thai oyster (Ostreidae) based on partial sequences of the mitochondrial 16S rDNA gene

    Bussarawit, S., Gravlund, P., Glenner, Henrik & Rasmussen, A. R., 2006, In: Phuket Marine Biological Center. Research Bulletin. 67, 1-9, p. 1-9

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Acid-base regulation in tadpoles of Rana catesbeiana exposed to environmental hypercapnia

    Busk, M., Larsen, Erik Hviid & Jensen, F. B., 1997, In: Journal of Experimental Biology. 200, 19, p. 2507-2512

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Graph neural network interatomic potential ensembles with calibrated aleatoric and epistemic uncertainty on energy and forces

    Busk, J., Schmidt, M. N., Winther, Ole, Vegge, T. & Jørgensen, P. B., 2023, In: Physical Chemistry Chemical Physics. 25, p. 25828-25837 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Forecasting Mood in Bipolar Disorder From Smartphone Self-assessments: Hierarchical Bayesian Approach

    Busk, J., Faurholt-Jepsen, M., Frost, M., Bardram, J. E., Kessing, Lars Vedel & Winther, Ole, 1 Apr 2020, In: JMIR mHealth and uHealth. 8, 4, 14 p., e15028.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Calibrated uncertainty for molecular property prediction using ensembles of message passing neural networks

    Busk, J., Jørgensen, P. B., Bhowmik, A., Schmidt, M. N., Winther, Ole & Vegge, T., 2022, In: Machine Learning: Science and Technology. 3, 1, 12 p., 015012.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Daily estimates of clinical severity of symptoms in bipolar disorder from smartphone-based self-assessments

    Busk, J., Faurholt-Jepsen, M., Frost, M., Bardram, J. E., Kessing, Lars Vedel & Winther, Ole, 2020, In: Translational Psychiatry. 10, 12 p., 194.

    Research output: Contribution to journal › Journal article › Research › peer-review

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