- Published
Metagenomic analysis reveals crosstalk between gut microbiota and glucose-lowering drugs targeting the gastrointestinal tract in Chinese patients with type 2 diabetes: a 6 month, two-arm randomised trial
Zhang, X., Ren, H., Zhao, C., Shi, Z., Qiu, L., Yang, F., Zhou, X., Han, X., Wu, K., Zhong, H., Li, Y., Li, J. & Ji, L., 2022, In: Diabetologia. 65, 11, p. 1613-1626 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sex- and age-related trajectories of the adult human gut microbiota shared across populations of different ethnicities
Zhang, X., Zhong, H., Li, Y., Shi, Z., Ren, H., Zhang, Z., Zhou, X., Tang, S., Han, X., Lin, Y., Yang, F., Wang, D., Fang, C., Fu, Z., Wang, L., Zhu, S., Hou, Y., Xu, X., Yang, H., Wang, J. & 3 others, , 2021, In: Nature Aging. 1, 1, p. 87-100 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment
Zhang, X., Zhang, D., Jia, H., Feng, Q., Wang, D., Liang, D., Wu, X., Li, J., Tang, L., Li, Y., Lan, Z., Chen, B., Li, Y., Zhong, H., Xie, H., Jie, Z., Chen, W., Tang, S., Xu, X., Wang, X. & 28 others, , 2015, In: Nature Medicine. 21, 8, p. 895-905 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Life history responses of Daphnia magna feeding on toxic Microcystis aeruginosa alone and mixed with a mixotrophic Poterioochromonas species
Zhang, X., Perlt, Trine Warming, Hu, H. & Christoffersen, Kirsten Seestern, 2009, In: Water Research. 43, 20, p. 5053-62 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of Poterioochromonas abundance on production of intra- and extracellular microcystin-LR concentration
Zhang, X., Hu, H., Men, Y. & Christoffersen, Kirsten Seestern, 2010, In: Hydrobiologia. 652, 1, p. 237-246 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Feeding characteristics of a golden alga (Poterioochromonas sp.) grazing on toxic cyanobacterium Microcystis aeruginosa
Zhang, X., Hu, H., Men, Y., Yang, J. & Christoffersen, Kirsten Seestern, 2009, In: Water Research. 43, 12, p. 2953-60 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Life history response of Daphnia magna to a mixotrophic golden alga, Poterioochromonas sp., at different food levels
Zhang, X., Hu, H., Perlt, Trine Warming & Christoffersen, Kirsten Seestern, 2011, In: Bulletin of Environmental Contamination and Toxicology. 87, 2, p. 117-123 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inactivation of Target RNA Cleavage of a III-B CRISPR-Cas System Induces Robust Autoimmunity in Saccharolobus islandicus
Zhang, Y., Lin, Jinzhong, Tian, X., Wang, Y., Zhao, R., Wu, C., Wang, X., Zhao, P., Bi, X., Yu, Z., Han, W., Peng, N., Liang, Y. X. & She, Q., 2022, In: International Journal of Molecular Sciences . 23, 15, 16 p., 8515.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Upretia squamulosa, a new lichen species from the arid valley of Jinsha-Jiang river, China
Zhang, Y. Y., Wang, X. Y., Li, L. J., Søchting, Ulrik, Yin, A. C., Wang, S. Q. & Wang, L. S., 8 May 2019, In: Phytotaxa. 402, 6, p. 288-294 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel (p)ppGpp Binding and Metabolizing Proteins of Escherichia coli
ZHANG, YONG, Zbornikova, E., Rejman, D. & Gerdes, K., 2018, In: mBio. 9, 2, 20 p., e02188-17.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
SOAPTyping: an open-source and cross-platform tool for sequence-based typing for HLA class I and II alleles
Zhang, Yong, Chen, Y., Xu, H., Fang, J., Zhao, Z., Hu, W., Yang, X., Ye, J., Cheng, Y., Wang, J., Sun, W., Wang, J., Yang, H., Yan, J. & Fang, L., 2020, In: BMC Bioinformatics. 21, 9 p., 295.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A bacterial ras-like small GTP-binding protein and its cognate GAP establish a dynamic spatial polarity axis to control directed motility
ZHANG, YONG, Franco, M., Ducret, A. & Mignot, T., Jul 2010, In: PLOS Biology. 8, 7Research output: Contribution to journal › Journal article › Research › peer-review
- Published
(p)ppGpp Regulates a Bacterial Nucleosidase by an Allosteric Two-Domain Switch
ZHANG, YONG, Bærentsen, R. L., Fuhrer, T., Sauer, U., Gerdes, K. & Brodersen, D. E., 2019, In: Molecular Cell. 74, 6, p. 1239-1249, e1-e4Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Green waste and sewage sludge feeding ratio alters co-composting performance: Emphasis on the role of bacterial community during humification
Zhang, Z., Duan, C., Liu, Y., Li, A., Hu, X., Chen, J., Zhang, S., Li, X., Che, R., Li, S., Ekelund, Flemming & Cui, X., 2023, In: Bioresource Technology. 380, 10 p., 129014.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Herbivore dung deposition increases soil respiration through elevated substrate availability and microbial biomass
Zhang, Z., Zhang, S. & Rinnan, Riikka, 2024, In: Applied Soil Ecology. 194, 10 p., 105203.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A massive expansion of effector genes underlies gall-formation in the wheat pest Mayetiola destructor
Zhao, C., Escalante, L. N., Chen, H., Benatti, T. R., Qu, J., Chellapilla, S., Waterhouse, R. M., Wheeler, D., Andersson, M. N., Bao, R., Batterton, M., Behura, S. K., Blankenburg, K. P., Caragea, D., Carolan, J. C., Coyle, M., El-Bouhssini, M., Francisco, L., Friedrich, M., Gill, N. & 49 others, , 2015, In: Current biology : CB. 25, 5, p. 613-620 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Intake of a Chicken Protein-Based or Soy Protein-Based Diet Differentially Affects Growth Performance, Absorptive Capacity, and Gut Microbiota in Young Rats
Zhao, Fan, Wang, Chong, Song, S., Fang, C., Kristiansen, Karsten & Li, C., 2022, In: Molecular Nutrition and Food Research. 66, 13, 14 p., 2101124.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomics and Metabolomics Profiling of Pork Exudate Reveals Meat Spoilage during Storage
Zhao, Fan, Wei, Z., Bai, Y., Li, C., Zhou, G., Kristiansen, Karsten & Wang, Chong, 2022, In: Metabolites. 12, 7, 15 p., 570.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Casein and red meat proteins differentially affect the composition of the gut microbiota in weaning rats
Zhao, Fan, Wang, Chong, Song, S., Fang, C., Zhou, G., Li, C. & Kristiansen, Karsten, 2022, In: Food Chemistry. 397, 11 p., 133769.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dietary Protein Sources Differentially Affect the Growth of Akkermansia muciniphila and Maintenance of the Gut Mucus Barrier in Mice
Zhao, F., Zhou, G., Liu, X., Song, S., Xu, X., Hooiveld, G., Müller, M., Liu, L., Kristiansen, Karsten & Li, C., 2019, In: Molecular Nutrition & Food Research. 63, 23, 11 p., 1900589.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effects of Different Storage Temperatures on Bacterial Communities and Functional Potential in Pork Meat
Zhao, Fan, Wei, Z., Zhou, G., Kristiansen, Karsten & Wang, Chong, 2022, In: Foods. 11, 15, 12 p., 2307.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative transcriptome analysis of PBMC from HIV patients pre- and post-antiretroviral therapy
Zhao, F., Ma, J., Huang, L., Deng, Y., Li, L., Zhou, Y., Li, J., Li, S., Jiang, H., Yang, H., Gao, S., Wang, H. & Liu, Y., Jun 2017, In: Meta Gene. 12, p. 50-61 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Next generation sequencing facilitates the mining of genomic information in a clinical pathogen (Clostridium difficile) and the viromes of wildlife bats and rodents
Zhao, Hailong, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 127 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Global Landscape of Clostridioides Difficile Phylogeography, Antibiotic Susceptibility, and Toxin Polymorphisms by Post-Hoc Whole-Genome Sequencing from the MODIFY I/II Studies
Zhao, Hailong, Nickle, D. C., Zeng, Z., Law, P. Y. T., Wilcox, M. H., Chen, L., Peng, Y., Meng, J., Deng, Z., Albright, A., Zhong, H., Xu, X., Zhu, S., Shen, J., Blanchard, R. L., Dorr, M. B., Shaw, P. M. & Li, J., 2021, In: Infectious Diseases and Therapy. 10, 2, p. 853-870 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative transcriptome studies reveal mitochondrial role in lung cancer classification and mechanism in cancer-resistant species: Transcriptomics studies on cancer-resistant species
Zhao, J., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 130 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Reply to: Transformation of naked mole-rat cells
Zhao, J., Tian, X., Zhu, Y., Zhang, Z., Rydkina, E., Yuan, Y., Zhang, H., Roy, B., Cornwell, A., Nevo, E., Shang, X., Huang, R., Kristiansen, Karsten, Seluanov, A., Fang, X. & Gorbunova, V., 2020, In: Nature. 583, 7814, p. E8-E13Research output: Contribution to journal › Letter › Research › peer-review
- Published
Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma
Zhao, L-H., Liu, X., Yan, H-X., Li, W-Y., Zeng, X., Yang, Y., Zhao, J., Liu, S-P., Zhuang, X-H., Lin, C., Qin, C-J., Zhao, Y., Pan, Z-Y., Huang, G., Liu, H., Zhang, J., Wang, R-Y., Yang, Y., Wen, W., Lv, G-S. & 21 others, , 2016, In: Nature Communications. 7, 9 p., 12992.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rare inborn errors associated with chronic hepatitis B virus infection
Zhao, Q., Peng, L., Huang, W., Li, Q., Pei, Y., Yuan, P., Zheng, L., Zhang, Y., Deng, J., Zhong, C., Hu, B., Ding, H., Fang, W., Li, R., Liao, Q., Lin, C., Deng, W., Yan, H., Hou, J., Wu, Q. & 17 others, , 2012, In: Hepatology. 56, 5, p. 1661-1670 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Membrane-Associated DHH-DHHA1 Nuclease Degrades Type III CRISPR Second Messenger
Zhao, R., Yang, Y., Zheng, F., Zeng, Z., Feng, W., Jin, X., Wang, J., Yang, K., Liang, Y. X., She, Q. & Han, W., 2020, In: Cell Reports. 32, 11, 16 p., 108133.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Whole-genome sequencing of giant pandas provides insights into demographic history and local adaptation
Zhao, S., Zheng, P., Dong, S., Zhan, X., Wu, Q., Guo, X., Hu, Y., He, W., Zhang, S., Fan, W., Zhu, L., Li, D., Zhang, X., Chen, Q., Zhang, H., Zhang, Z., Jin, X., Zhang, J., Yang, H., Wang, J. & 2 others, , 2013, In: Nature Genetics. 45, 1, p. 67-71 5 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
GMD: measuring the distance between histograms with applications on high-throughput sequencing reads
Zhao, X. & Sandelin, Albin Gustav, 2012, In: Bioinformatics. 28, 8, p. 1164-1165 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
On gene regulation in eukaryotes: computational approaches to decipher transcriptional regulation at genetic and epigenetic level
Zhao, X., 2012, Department of Biology, Faculty of Science, University of Copenhagen. 170 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Systematic clustering of transcription start site landscapes
Zhao, X., Valen, E., Parker, B. J. & Sandelin, Albin Gustav, 2011, In: P L o S One. 6, 8, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fine roots and extramatrical mycelia regulate the composition of soil organic carbon and nitrogen in a subtropical montane forest
Zhao, X., Tian, Q., Michelsen, Anders, Chen, L., Yue, P., Feng, Z., Lin, Q., Zhao, R. & Liu, F., 2024, In: Forest Ecology and Management. 554, 8 p., 121661.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effects of mycorrhizal associations on fine root decomposition in temperate and (sub)tropical forests
Zhao, X., Tian, Q., Michelsen, Anders, Lin, Q., Zhao, R., Yuan, X., Chen, L., Zuo, J. & Liu, F., 2023, In: Plant and Soil. 487, 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of experimental warming on fine root functional traits of woody plants: Data synthesis
Zhao, X., Tian, Q., Michelsen, Anders, Lu, M., Ren, B., Huang, L. & Zhao, R., 2023, In: Science of the Total Environment. 894, 9 p., 165003.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Home-field advantage of litter decomposition differs among leaves, absorptive roots, and transport roots
Zhao, X., Tian, Q., Michelsen, Anders, Lin, Q., Yuan, X., Chen, L., Lu, M., Jiang, Q., Zhao, R. & Liu, F., 2024, (E-pub ahead of print) In: Plant and Soil.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparison of In-Frame Deletion, Homology-Directed Repair, and Prime Editing-Based Correction of Duchenne Muscular Dystrophy Mutations
Zhao, X., Qu, Kunli, Curci, B., Yang, H., Bolund, L., Lin, L. & Luo, Y., 2023, In: Biomolecules. 13, 5, 15 p., 870.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploration of Intratumor Heterogeneity and Tumoral Microenvironment in Non-small Cell Lung Cancer
Zhao, X., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 137 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Exome sequencing and linkage analysis identified Tenascin-C (TNC) as a novel causative gene in nonsyndromic hearing loss
Zhao, Y., Zhao, F., Zong, L., Zhang, P., Guan, L., Zhang, J., Wang, D., Wang, J., Chai, W., Lan, L., Li, Q., Han, B., Yang, L., Jin, X., Yang, W., Hu, X., Wang, X., Li, N., Li, Y., Petit, C. & 4 others, , 2013, In: P L o S One. 8, 7, 8 p., e69549.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolution of multiple cell clones over a 29-year period of a CLL patient
Zhao, Z., Goldin, L., Liu, S., Wu, L., Zhou, W., Lou, H., Yu, Q., Tsang, S. X., Jiang, M., Li, F., McMaster, M., Li, Y., Lin, X., Wang, Z., Xu, L., Marti, G., Li, G., Wu, K., Yeager, M., Yang, H. & 6 others, , 2016, In: Nature Communications. 7, 10 p., 13765.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Three novel structural variations at the major histocompatibility complex and IL12B predispose to psoriasis
Zhen, Q., Zhang, Y., Yu, Y., Yang, H., Zhang, T., Li, X., Mo, X., Li, B., Wu, J., Liang, Y., Ge, H., Xu, Q., Chen, W., Qian, W., Xu, H., Chen, G., Bai, B., Zhang, J., Lu, Y., Chen, S. & 31 others, , 2022, In: British Journal of Dermatology. 186, 2, p. 307-317 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effective noninvasive zygosity determination by maternal plasma target region sequencing
Zheng, J., Xu, C., Guo, J., Wei, Y., Ge, H., Li, X., Zhang, C., Jiang, H., Pan, L., Tang, W., Xie, W., Zhang, H., Zhao, Y., Jiang, F., Chen, S., Wang, W., Xu, X., Chen, F., Huang, H. & Jiang, H., 2013, In: P L o S One. 8, 6, 6 p., e65050.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Expression of genes and enzymes involved in ovarian steroidogenesis in relation to human follicular development
Zheng, M., tcg964, tcg964, Rasmussen, F. R., Cadenas, J., Christensen, Søren Tvorup & Mamsen, L. S., 2023, In: Frontiers in Endocrinology. 14, 17 p., 1268248.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Development of a Simvastatin Selection Marker for a Hyperthermophilic Acidophile, Sulfolobus islandicus
Zheng, T., Huang, Q., Zhang, C., Ni, J., She, Q. & Shen, Y., 2012, In: Applied and Environmental Microbiology. 78, 2, p. 568-574 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Systematical analysis reveals a strong cancer relevance of CREB1-regulated genes
Zheng, T., Huang, J., Xiang, X., Li, S., Yu, J., Qu, K., Xu, Z., Han, P., Dong, Z., Liu, Y., Xu, F., Yang, H., Jäättelä, M., Luo, Y. & Liu, B., 2021, In: Cancer Cell International. 21, 16 p., 530.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
MethylPurify: tumor purity deconvolution and differential methylation detection from single tumor DNA methylomes
Zheng, X., Zhao, Q., Wu, H., Li, W., Wang, H., Meyer, C. A., Qin, Q. A., Xu, H., Zang, C., Jiang, P., Li, F., Hou, Y., He, J., Wang, J., Wang, J., Zhang, P., Zhang, Y. & Liu, X. S., 2014, In: Genome Biology (Online Edition). 15, 8, 13 p., 419.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequencing, annotation and comparative analysis of nine BACs of giant panda (Ailuropoda melanoleuca)
Zheng, Y., Cai, J., Li, J., Li, B., Lin, R., Tian, F., Wang, X. & Wang, J., 2010, In: Science China Life Sciences. 53, 1, p. 107-111 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Engineering of phi29 DNA polymerase with elevated thermostability and replication activity
Zheng, Y., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 139 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The origin of domestication genes in goats
Zheng, Z., Wang, X., Li, M., Li, Y., Yang, Z., Wang, X., Pan, X., Gong, M., Zhang, Y., Guo, Y., Wang, Y., Liu, J., Cai, Y., Chen, Q., Okpeku, M., Colli, L., Cai, D., Wang, K., Huang, S., Sonstegard, T. S. & 16 others, , 2020, In: Science Advances. 6, 21, eaaz5216.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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