Department of Biology

 

 
  1. 2023
  2. Published

    Social calls of the little auk (Alle alle) reflect body size and possibly partnership, but not sex

    Osiecka, A. N., Briefer, Elodie, Kidawa, D. & Wojczulanis-jakubas, K., 2023, In: Royal Society Open Science. 10, 9, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Soil aggregates affect the legacy effect of copper pollution on the microbial communities

    Lv, Z., Rønn, Regin, Liao, H., Rensing, C., Chen, W., Huang, Q. & Hao, X., 2023, In: Soil Biology and Biochemistry. 182, 10 p., 109048.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Soil uptake of VOCs exceeds production when VOCs are readily available

    Jiao, Yi, Kramshøj, M., Davie-Martin, Cleo Lisa, Albers, C. N. & Rinnan, Riikka, 2023, In: Soil Biology and Biochemistry. 185, 12 p., 109153.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Spatial transcriptome unveils a discontinuous inflammatory pattern in proficient mismatch repair colorectal adenocarcinoma

    Zhang, R., Feng, Y., Ma, W., Guo, Y., Luo, M., Li, Y., Zang, Y., Dong, X., Lu, S., Guo, Q., Xu, Q., Chen, H., Li, Y., Liu, L., CHEN, Ao, Chen, G. & Xu, X., 2023, In: Fundamental Research. 3, 4, 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Spatial-temporal variations of nitrous oxide emissions in coffee agroforestry systems in Costa Rica

    Bentzon-Tarp, A., Helgadóttir, D., Van den Meersche, K., Gay, F., Priemé, Anders, Roupsard, O., Mages, C. & Elberling, Bo, 2023, In: Agriculture, Ecosystems and Environment. 343, 11 p., 108257.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Species-specific traits mediate avian demographic responses under past climate change

    Germain, Ryan Ross, Feng, S., Chen, G., Graves, G. R., Tobias, J. A., Rahbek, Carsten, Lei, F., Fjeldså, Jon, Hosner, Peter Andrew, Gilbert, M Thomas P, KU, thw266 & Nogues, David Bravo, 2023, In: Nature Ecology and Evolution. 7, 6, p. 862-872 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Specific gut pathobionts escape antibody coating and are enriched during flares in patients with severe Crohn's disease

    Eriksen, C., Danneskiold-Samsøe, Niels Banhos, Moll, J. M., Myers, P. N., Bondegaard, P. W., Vejrum, S., Hansen, T. B., Rosholm, L. B., Rausch, P., Allin, K. H., Jess, T., Kristiansen, Karsten, Penders, J., Jonkers, D. & Brix, S., 2023, In: Gut. 73, 3, p. 448-458 11 p., e330677.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Staying below the Radar: Unraveling a New Family of Ubiquitous “Cryptic” Non-Tailed Temperate Vibriophages and Implications for Their Bacterial Hosts

    Kalatzis, P. G., Mauritzen, Jesper Juel, Winther-Have, Caroline Sophie W, Michniewski, S., Millard, A., Tsertou, M. I., Katharios, P. & Middelboe, Mathias, 2023, In: International Journal of Molecular Sciences. 24, 4, 23 p., 3937.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Strain-specific quorum-sensing responses determine virulence properties in Vibrio anguillarum

    Mauritzen, Jesper Juel, Søndberg, E., Kalatzis, Panagiotis, Roager, L., Gram, L., Svenningsen, Sine Lo & Middelboe, Mathias, 2023, In: Environmental Microbiology. 25, 7, 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Structural basis for kinase inhibition in the tripartite E. coli HipBST toxin-antitoxin system

    Bærentsen, R. L., Nielsen, S. V., Skjerning, R. B., Lyngsø, J., Bisiak, F., Pedersen, J. S., Gerdes, K., Sørensen, Michael Askvad & Brodersen, D. E., 2023, In: eLife. 12, 20 p., RP90400.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Structural characterization of human tryptophan hydroxylase 2 reveals that L-Phe is superior to L-Trp as the regulatory domain ligand

    Vedel, I. M., Prestel, Andreas, Zhang, Z., Skawinska, N. T., Stark, H., Harris, Pernille, Kragelund, Birthe Brandt & Peters, G. H. J., 2023, In: Structure (London, England : 1993). 31, 6, p. 689-699e6 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Studies on the complex Warnowiaceae (Dinophyceae) I. Lohmann’s Pouchetia parva refound and renamed Nematodinium parvum comb. nov. (= Warnowia parva)

    García Portela, M., Moestrup, Øjvind, Daugbjerg, Niels, Altenburger, A. & Lundholm, Nina, 2023, In: Phycologia. 62, 5, p. 421-435 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Surprising leopard restoration in fragmented ecosystems reveals connections as the secret to conservation success

    Yanwen, F., Guojing, Z., Wenqian, D., Yue, W., Jiawei, L., Mengyu, T., Yan, L., Haoran, L., Bing, X., Xiao, J., Enyu, F., Lulu, Z., Jian, C., Lei, Y., Chenghao, W., Yongfeng, C., Guoqiang, C., Yong, Z., Kezi, L., Haitao, Y. & 4 others, Xuemei, H., Jianping, G., Jun, Z. & Limin, F., 2023, In: Science of the Total Environment. 858, 8 p., 159790.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Symmetric inheritance of parental histones governs epigenome maintenance and embryonic stem cell identity

    Wenger, Alice, Biran, Alva Ada, Alcaraz, N., Riveiro, Alba, Sell, Annika Charlotte, Krautz, Robert, Flury, Valentin, Reveron-Gomez, Nazaret, Solis-Mezarino, V., Völker-Albert, M., Imhof, A., Andersson, Robin, Brickman, Joshua Mark & Groth, Anja, 2023, In: Nature Genetics. 55, 9, p. 1567-1578 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Synergistic effects of agonists and two-pore-domain potassium channels on secretory responses of human pancreatic duct cells Capan-1

    Sørensen, Christiane Elisabeth, Trauzold, A., Christensen, Nynne, Tawfik, D., Szczepanowski, M. & Novak, Ivana, 2023, In: Pflügers Archiv - European Journal of Physiology. 475, 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Synergistic interactions in multispecies biofilm combinations of bacterial isolates recovered from diverse food processing industries

    Sadiq, F. A., De Reu, K., Burmølle, Mette, Maes, S. & Heyndrickx, M., 2023, In: Frontiers in Microbiology. 14, 13 p., 1159434.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Systematic Analysis of Long Non-Coding RNAs in Inflammasome Activation in Monocytes/Macrophages

    Qian, N., Distefano, R., Ilieva, M., Madsen, J. H., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 5, 16 p., 50.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    T2DB: A Web Database for Long Non-Coding RNA Genes in Type II Diabetes

    Distefano, R., Ilieva, M., Madsen, J. H., Ishii, H., Aikawa, M., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 3, 20 p., 30.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published
  21. Published

    Targeted imaging of uPAR expression in vivo with cyclic AE105 variants

    Leth, Julie Maja, Newcombe, Estella Anne, Grønnemose, A. L., Jørgensen, Jesper Tranekjær, Qvist, K., Clausen, Anne Skovsbo, Knudsen, Line Bruhn Schneider, Kjær, Andreas, Kragelund, Birthe Brandt, Jørgensen, Thomas Jørgen Dyreborg & Ploug, Michael, 2023, In: Scientific Reports. 13, 17 p., 17248.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Temporal phosphoproteomics reveals WEE1-dependent control of 53BP1 pathway

    Petrosius, V., Benada, Jan, Nielsen, Olaf, Schoof, E. M. & Sørensen, Claus Storgaard, 2023, In: iScience. 26, 1, 24 p., 105806.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    The ABA/LANCL1/2 Hormone/Receptor System Controls Adipocyte Browning and Energy Expenditure

    Spinelli, S., Cossu, V., Passalacqua, M., Hansen, Jacob B., Guida, L., Magnone, M., Sambuceti, G., Marini, C., Sturla, L. & Zocchi, E., 2023, In: International Journal of Molecular Sciences. 24, 4, 27 p., 3489.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    The Biology and Life Cycle of Enigmatic Crustacean Y-Larvae: A Review

    Dreyer, N., Olesen, Jørgen, Grygier, M. J., Eibye-Jacobsen, Danny, Høeg, Jens Thorvald, Kerbl, A., Fujita, Y., Kolbasov, G. A., Savchenko, A. S., Worsaae, Katrine, Palero, F. & Chan, B. K. K., 2023, Oceanography and Marine Biology: An Annual Review, Volume 61. Hawkins, S. J., Todd, P. A. & Russell, B. D. (eds.). CRC Press, p. 81-126 46 p. (Oceanography and Marine Biology, Vol. 61).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  25. Published

    The C:N: P stoichiometry in bryophytes: relationships with habitat, climate and growth form

    Liu, X., Wang, Z., Li, X., Bao, W. & Rousk, Kathrin, 2023, In: National Science Review. 10, 4, 3 p., nwad060.

    Research output: Contribution to journalLetterResearchpeer-review

  26. Published

    The Chemical Ecology and Defence of the Fungus-Farming Termite Symbiosis

    Schmidt, Suzanne, 2023, Section for Ecology and Evolution, Department of Biology, University of Copenhagen. 252 p.

    Research output: Book/ReportPh.D. thesisResearch

  27. Published

    The Discovery of Anti-defense Genes in Archaea

    Xu, Shuanshuan, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 117 p.

    Research output: Book/ReportPh.D. thesisResearch

  28. Published

    The Drosophila tumor necrosis factor receptor, Wengen, couples energy expenditure with gut immunity

    Loudhaief, Rihab, Jneid, Rouba, Christensen, Christian Fokdal, Mackay, Duncan John, Andersen, Ditte Skovaa & Colombani, Julien, 2023, In: Science Advances. 9, 23, 15 p., eadd4977.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics

    Mc Cartney, A. M., Formenti, G., Mouton, A., Panis, D. D., Marins, L. S., Leitão, H. G., Diedericks, G., Kirangwa, J., Morselli, M., Salces-Ortiz, J., Escudero, N., Iannucci, A., Natali, C., Svardal, H., Fernández, R., Pooter, T. D., Joris, G., Strazisar, M., Wood, J., Herron, K. E. & 30 others, Seehausen, O., Watts, P. C., Shaw, F., Davey, R. P., Minotto, A., Fernández, J. M., Böhne, A., Alegria, C., Alioto, T., Alves, P. C., Amorim, I. R., Aury, J., Backstrom, N., Baldrian, P., Baltrunaite, L., Barta, E., Bed’Hom, B., Belser, C., Bergsten, J., Bertrand, L., Bilandžija, H., Binzer-Panchal, M., Bista, I., Blaxter, M., Borges, P. A., Dias, G. B., Bosse, M., Garg, S., Madsen, O. & Stiller, Josefin, 2023, 51 p. (bioRxiv).

    Research output: Working paperPreprintResearch

  30. Published

    The GPCR adaptor protein Norbin regulates S1PR1 trafficking and the morphology, cell cycle and survival of PC12 cells

    Johansen, Valdemar Brimnes Ingemann, Hampson, E., Tsonou, E., Pantarelli, C., Chu, J. Y., Crossland, L., Okkenhaug, H., Massey, A. J., Hornigold, D. C., Welch, H. C. E. & Chetwynd, S. A., 2023, In: Scientific Reports. 13, 1, 13 p., 18237.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    The Impact of Dietary Factors during Pregnancy on the Development of Islet Autoimmunity and Type 1 Diabetes: A Systematic Literature Review

    Johansen, Valdemar Brimnes Ingemann, Josefsen, K. & Antvorskov, J. C., 2023, In: Nutrients. 15, 20, 24 p., 4333.

    Research output: Contribution to journalReviewResearchpeer-review

  32. Published

    The Influence of Body Size on Behavioral Thermal Preference in Atlantic Cod (Gadus morhua): Larger Fish Favor Colder Waters

    Schakmann, M., Christensen, E. A. F., Steffensen, John Fleng & Svendsen, M. B. S., 2023, In: Fishes. 8, 12, 11 p., 596.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    The Mixoplankton Database (MDB): Diversity of photo‐phago‐trophic plankton in form, function, and distribution across the global ocean

    Mitra, A., Caron, D. A., Faure, E., Flynn, K. J., Leles, S. G., Hansen, Per Juel, McManus, G. B., Not, F., Rosario Gomes, H. D., Santoferrara, L. F., Stoecker, D. K. & Tillmann, U., 2023, In: Journal of Eukaryotic Microbiology. 70, 4, 25 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    The N-coil and the globular N-terminal domain of plant ARGONAUTE1 are interaction hubs for regulatory factors

    Bressendorff, Simon, Kausika, S., Sjøgaard, Ida Marie Zobbe, Oksbjerg, Emilie Duus, Michels, A., Poulsen, C. & Brodersen, Peter, 2023, In: Biochemical Journal. 480, 13, p. 957-974 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    The Origin of Recent Climate: Drifting into the ice ages

    Houmark-Nielsen, Michael, 2023, The Origins of All Things. Harper, D. A. T. & Seberg, O. (eds.). 1 ed. København: Munksgaard , Vol. 1. p. 357-371 15 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterEducation

  36. Published

    The Origins of All Things

    A.T. Harper, D. (ed.) & Seberg, Ole (ed.), 2023, 1 ed. Copnhagen: Munksgaard . 447 p.

    Research output: Book/ReportBookEducation

  37. Published

    The Role of ZGRF1 in Recombinational Repair and Telomere Stability Maintenance

    Bagge, Keerthana Stine Viswalingam, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 179 p.

    Research output: Book/ReportPh.D. thesisResearch

  38. Published

    The Sea Aster mining bee Colletes halophilus Verhoeff, 1944 (Hymenoptera: Colletidae) widely distributed at the Baltic Sea coast of Denmark and Germany

    Drews, A., Adam, K., Gräper, J., Herrmann, H., Koppitz, C., Kornmilch, J., Madsen, Henning Bang, Rasmussen, C., Török, M. & Kuhlmann, M. (ed.), 2023, In: Faunistisch-Ökologische Mitteilungen. 12, p. 13-21 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria

    Thorsen, Jonathan Jan Ilve, Li, Xuan Ji, Peng, Shuang, Sunde, R. B., Shah, S. A., Bhattacharyya, M., Poulsen, C. S., Poulsen, Christina Egeø, Leal Rodriguez, C., Widdowson, Michael Lawrence, Neumann, A. U., Trivedi, Urvish, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Nature Communications. 14, 12 p., 6668.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    The barrier to radial oxygen loss protects roots against hydrogen sulphide intrusion and its toxic effect

    Peralta Ogorek, Lucas León, Takahashi, H., Nakazono, M. & Pedersen, Ole, 2023, In: New Phytologist. 238, 5, p. 1825-1837 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    The cellular 3D printer of a marine bristle worm—chaetogenesis in Platynereis dumerilii (Audouin & Milne Edwards, 1834) (Annelida)

    Tilic, E., Herkenrath, T., Kirfel, G. & Bartolomaeus, T., 2023, In: Cell and Tissue Research. 391, p. 305-322

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    The combined effect of pH and dissolved inorganic carbon concentrations on the physiology of plastidic ciliate Mesodinium rubrum and its cryptophyte prey

    Yde Eriksen, C. S., Desmaret Walli, M., Van de Waal, D. B., Helmsing, N. R., Dahl, E. O., Sørensen, Helle & Hansen, Per Juel, 2023, In: Harmful Algae. 129, 11 p., 102509.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    The effect of experimental warming on fine root functional traits of woody plants: Data synthesis

    Zhao, X., Tian, Q., Michelsen, Anders, Lu, M., Ren, B., Huang, L. & Zhao, R., 2023, In: Science of the Total Environment. 894, 9 p., 165003.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    The effect of linker conformation on performance and stability of a two-domain lytic polysaccharide monooxygenase

    Forsberg, Z., Stepnov, A. A., Tesei, Giulio, Wang, Yong, Buchinger, E., Kristiansen, S. K., Aachmann, F. L., Arleth, Lise, Eijsink, V. G. H., Lindorff-Larsen, Kresten & Courtade, G., 2023, In: Journal of Biological Chemistry. 299, 11, 17 p., 105262.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    The effects of mycorrhizal associations on fine root decomposition in temperate and (sub)tropical forests

    Zhao, X., Tian, Q., Michelsen, Anders, Lin, Q., Zhao, R., Yuan, X., Chen, L., Zuo, J. & Liu, F., 2023, In: Plant and Soil. 487, 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights

    Shao, C., Sun, S., Liu, K., Wang, J., Li, S., Liu, Q., Deagle, B. E., Seim, I., Biscontin, A., Wang, Q., Liu, X., Kawaguchi, S., Liu, Y., Jarman, S., Wang, Y., Wang, H. Y., Huang, G., Hu, J., Feng, B., De Pittà, C. & 29 others, Liu, S., Wang, R., Ma, K., Ying, Y., Sales, G., Sun, T., Wang, X., Zhang, Y., Zhao, Y., Pan, S., Hao, X., Wang, Y., Xu, J., Yue, B., Sun, Y., Zhang, H., Xu, M., Liu, Y., Jia, X., Zhu, J., Liu, S., Ruan, J., KU, thw266, Yang, H., Xu, X., Wang, J., Zhao, X., Meyer, B. & Fan, G., 2023, In: Cell. 186, 6, p. 1279-1294.e19 36 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs

    Ciucani, M. M., Ramos-Madrigal, J., Hernández-Alonso, G., Carmagnini, A., Aninta, S. G., Sun, X., Scharff-Olsen, C. H., Lanigan, L. T., Fracasso, I., Clausen, C. G., Aspi, J., Kojola, I., Baltrūnaitė, L., Balčiauskas, L., Moore, J., Åkesson, M., Saarma, U., Hindrikson, M., Hulva, P., Bolfíková, B. Č. & 19 others, Nowak, C., Godinho, R., Smith, S., Paule, L., Nowak, S., Mysłajek, R. W., Lo Brutto, S., Ciucci, P., Boitani, L., Vernesi, C., Stenøien, H. K., Smith, O., Frantz, L., Rossi, L., Angelici, F. M., Cilli, E., Sinding, Mikkel Holger Strander, Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2023, In: iScience. 26, 8, 22 p., 107307.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    The genetic background of hydrocephalus in a population-based cohort: implication of ciliary involvement

    Munch, Tina Nørgaard, Hedley, P. L., Hagen, C. M., Baekvad-Hansen, M., Geller, F., Bybjerg-Grauholm, J., Nordentoft, Merete, Borglum, A. D., Werge, Thomas, Melbye, M., Hougaard, D. M., Larsen, Lars Allan, Christensen, Søren Tvorup & Christiansen, M., 2023, In: Brain Communications. 5, 1, 14 p., fcad004.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    The genomic landscape of reference genomes of cultivated human gut bacteria

    Lin, X., Hu, T., Chen, J., Liang, H., Zhou, J., Wu, Z., Ye, C., Jin, X., Xu, X., Zhang, W., Jing, X., Yang, T., Wang, J., Yang, H., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: Nature Communications. 14, 1, 11 p., 1663.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    The global EPTO database: Worldwide occurrences of aquatic insects

    Grigoropoulou, A., Hamid, S. A., Acosta, R., Akindele, E. O., Al‐shami, S. A., Altermatt, F., Amatulli, G., Angeler, D. G., Arimoro, F. O., Aroviita, J., Astorga‐roine, A., Bastos, R. C., Bonada, N., Boukas, N., Brand, C., Bremerich, V., Bush, A., Cai, Q., Callisto, M., Chen, K. & 73 others, Cruz, P. V., Dangles, O., Death, R., Deng, X., Domínguez, E., Dudgeon, D., Eriksen, T. E., Faria, A. P. J., Feio, M. J., Fernández‐aláez, C., Floury, M., García‐criado, F., García‐girón, J., Graf, W., Grönroos, M., Haase, P., Hamada, N., He, F., Heino, J., Holzenthal, R., Huttunen, K., Jacobsen, Dean, Jähnig, S. C., Jetz, W., Johnson, R. K., Juen, L., Kalkman, V., Kati, V., Keke, U. N., Koroiva, R., Kuemmerlen, M., Langhans, S. D., Ligeiro, R., Van looy, K., Maasri, A., Marchant, R., Garcia marquez, J. R., Martins, R. T., Melo, A. S., Metzeling, L., Miserendino, M. L., Moe, S. J., Molineri, C., Muotka, T., Mustonen, K., Mykrä, H., Cavalcante do nascimento, J. M., Valente‐neto, F., Neu, P. J., Nieto, C., Pauls, S. U., Paulson, D. R., Rios‐touma, B., Rodrigues, M. E., De Oliveira roque, F., Salazar Salina, J., Schmera, D., Schmidt‐kloiber, A., Shah, D., Simaika, J. P., Siqueira, T., Tachamo‐shah, R. D., Theischinger, G., Thompson, R., Tonkin, J. D., Torres‐cambas, Y., Townsend, C., Turak, E., Twardochleb, L., Wang, B., Yanygina, L., Zamora‐muñoz, C. & Domisch, S., 2023, In: Global Ecology and Biogeography. 32, 5, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    The histone demethylase KDM5C functions as a tumor suppressor in AML by repression of bivalently marked immature genes

    Trempenau, M. L., Schuster, Mikkel Bruhn, Pundhir, Sachin, Araújo Pereira, Mafalda, Kalvisa, A., Tapia, Marta Cecylia, Su, Jinyu, Ge, Y., de Boer, Bauke, Balhuizen, Alexander, Bagger, F. O., Shliaha, P., Sroczynska, P., Walfridsson, J., Grønbæk, Kirsten, Theilgaard-Mønch, Kim, Jensen, O. N., Helin, K. & Porse, Bo Torben, 2023, In: Leukemia. 37, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    The history of Coast Salish “woolly dogs” revealed by ancient genomics and Indigenous Knowledge

    Lin, A. T., Hammond-Kaarremaa, L., Liu, H-L., Stantis, C., McKechnie, I., Pavel, M., Pavel, S. S. M., Wyss, S. S., Sparrow, D. Q., Carr, K., Aninta, S. G., Perri, A., Hartt, J., Bergström, A., Carmagnini, A., Charlton, S., Dalén, L., Feuerborn, T. R., France, C. A. M., Gopalakrishnan, S. & 13 others, Grimes, V., Harris, A., Kavich, G., Sacks, B. N., Sinding, Mikkel Holger Strander, Skoglund, P., Stanton, D. W. G., Ostrander, E. A., Larson, G., Armstrong, C. G., Frantz, L. A. F., Hawkins, M. T. R. & Kistler, L., 2023, In: Science. 382, 6676, p. 1303-1309 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. Published

    The impacts of the oil palm expansion on freshwater biodiversity and ecosystem functioning: The role of riparian buffers in mitigating stream biodiversity loss

    Rojas, Oscar, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 171 p.

    Research output: Book/ReportPh.D. thesisResearch

  54. Published

    The infant gut virome is associated with preschool asthma risk independently of bacteria

    Rodríguez, C. L., Shah, S. A., Rasmussen, Morten Arendt, Thorsen, J., Boulund, U., Pedersen, C. T., Castro-Mejía, J. L., Poulsen, Christina Egeø, Poulsen, C. S., Deng, Ling, Larsen, Frej Andreas Nøhr, Widdowson, Michael Lawrence, Zhang, Yichang, Sørensen, Søren Johannes, Moineau, S., Petit, M. A., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Nielsen, Dennis Sandris & Stokholm, Jakob, 2023, In: Nature Medicine. 30, p. 138-148 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    The insect cryptonephridial complex

    Beaven, R., Halberg, Kenneth Veland & Denholm, B., 2023, In: Current Biology. 33, 14, p. R748-R749 2 p.

    Research output: Contribution to journalComment/debateResearchpeer-review

  56. Published

    The landscape of tolerated genetic variation in humans and primates

    Gao, H., Hamp, T., Ede, J., Schraiber, J. G., McRae, J., Singer-Berk, M., Yang, Y., Dietrich, A. S. D., Fiziev, P. P., Kuderna, L. F. K., Sundaram, L., Wu, Y., Adhikari, A., Field, Y., Chen, C., Batzoglou, S., Aguet, F., Lemire, G., Reimers, R., Balick, D. & 77 others, Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A., Chuma, I. S., Horvath, J. E., Hvilsom, C., Juan, D., Frandsen, P., de Melo, F. R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., do Amaral, J. V., Messias, M., da Silva, M. N. F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C. J., Zaramody, A., Jolly, C. J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J. H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., KU, thw266, Keyyu, J. D., Knauf, S., Le, M. D., Lizano, E., Merker, S., Navarro, A., Bataillon, T., Nadler, T., Khor, C. C., Lee, J., Tan, P., Lim, W. K., Kitchener, A. C., Zinner, D., Gut, I., Melin, A., Guschanski, K., Schierup, M. H., Beck, R. M. D., Umapathy, G., Roos, C., Boubli, J. P., Lek, M., Sunyaev, S., O'Donnell-Luria, A., Rehm, H. L., Xu, J., Rogers, J., Marques-Bonet, T. & Farh, K. K. H., 2023, In: Science (New York, N.Y.). 380, 6648, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    The mRNA decapping machinery targets LBD3/ASL9 to mediate apical hook and lateral root development

    Zuo, Zhangli Thomsen, Roux, M. E., Chevalier, J. R., Dagdas, Y. F., Yamashino, T., Højgaard, S. D., Knight, E., Østergaard, L., Rodriguez, Eleazar & Petersen, Morten, 2023, In: Life Science Alliance. 6, 9, 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. Published

    The mesoglea buffers the physico-chemical microenvironment of photosymbionts in the upside-down jellyfish Cassiopea sp.

    Lyndby, N. H., Murray, M. C., Trampe, Erik, Meibom, A. & Kühl, Michael, 2023, In: Frontiers in Ecology and Evolution. 11, 12 p., 1112742.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    The moonlighting of RAD23 in DNA repair and protein degradation

    Grønbæk-Thygesen, Martin, Kampmeyer, Caroline, Hofmann, K. & Hartmann-Petersen, Rasmus, 2023, In: Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1866, 2, 16 p., 194925.

    Research output: Contribution to journalReviewResearchpeer-review

  60. Published

    The prolactin receptor scaffolds Janus kinase 2 via co-structure formation with phosphoinositide-4,5-bisphosphate

    Araya-Secchi, R., Bugge, K., Seiffert, P., Petry, A., Haxholm, G. W., Lindorff-Larsen, Kresten, Pedersen, Stine Helene Falsig, Arleth, Lise & Kragelund, Birthe Brandt, 2023, In: eLife. 12, 27 p., e84645.

    Research output: Contribution to journalJournal articleResearchpeer-review

  61. Published

    The promoters of OsGLP genes exhibited differentially methylated sites under drought and salt stress in rice cultivars

    Anum, J., O’Shea, C., Skriver, Karen, Saeed, M., Hyder, M. Z., Farrakh, S. & Yasmin, T., 2023, In: Euphytica. 219, 4, 15 p., 42.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    The quantitative importance of key root traits for radial water loss under low water potential

    Song, Zhiwei, Zonta, F., Peralta Ogorek, Lucas León, Bastegaard, V. K., Herzog, Max, Pellegrini, Elisa & Pedersen, Ole, 2023, In: Plant and Soil. 482, 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  63. Published

    The recovery of European freshwater biodiversity has come to a halt

    Haase, P., Bowler, D. E., Baker, N. J., Bonada, N., Domisch, S., Garcia Marquez, J. R., Heino, J., Hering, D., Jähnig, S. C., Schmidt-Kloiber, A., Stubbington, R., Altermatt, F., Álvarez-Cabria, M., Amatulli, G., Angeler, D. G., Archambaud-Suard, G., Jorrín, I. A., Aspin, T., Azpiroz, I., Bañares, I. & 76 others, Ortiz, J. B., Bodin, C. L., Bonacina, L., Bottarin, R., Cañedo-Argüelles, M., Csabai, Z., Datry, T., de Eyto, E., Dohet, A., Dörflinger, G., Drohan, E., Eikland, K. A., England, J., Eriksen, T. E., Evtimova, V., Feio, M. J., Ferréol, M., Floury, M., Forcellini, M., Forio, M. A. E., Fornaroli, R., Friberg, N., Fruget, J. F., Georgieva, G., Goethals, P., Graça, M. A. S., Graf, W., House, A., Huttunen, K. L., Jensen, T. C., Johnson, R. K., Jones, J. I., Kiesel, J., Kuglerová, L., Larrañaga, A., Leitner, P., L’Hoste, L., Lizée, M. H., Lorenz, A. W., Maire, A., Arnaiz, J. A. M., McKie, B. G., Millán, A., Monteith, D., Muotka, T., Murphy, J. F., Ozolins, D., Paavola, R., Paril, P., Peñas, F. J., Pilotto, F., Polášek, M., Rasmussen, J. J., Rubio, M., Sánchez-Fernández, D., Sandin, L., Schäfer, R. B., Scotti, A., Shen, L. Q., Skuja, A., Stoll, S., Straka, M., Timm, H., Tyufekchieva, V. G., Tziortzis, I., Uzunov, Y., van der Lee, G. H., Vannevel, R., Varadinova, E., Várbíró, G., Velle, G., Verdonschot, P. F. M., Verdonschot, R. C. M., Vidinova, Y., Wiberg-Larsen, P. & Welti, E. A. R., 2023, In: Nature. 620, 7974, p. 582-588 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. Published

    The resilience journey of rice: Root traits, genome editing and silicon-mediated strategies for enhanced abiotic stress tolerance in rice

    Tong, Shuai, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 139 p.

    Research output: Book/ReportPh.D. thesisResearch

  65. Published

    The role of host pigments in coral photobiology

    Ferreira, G., Bollati, Elena & Kühl, Michael, 2023, In: Frontiers in Marine Science. 10, 14 p., 1204843.

    Research output: Contribution to journalReviewResearchpeer-review

  66. Published

    The snowball Earth Hyphotesis - a Planet in the Fridge

    Houmark-Nielsen, Michael & Stouge, Svend, 2023, The Origins of All Things. Harper, D. A. T. & Seberg, O. (eds.). 1 ed. Copenhagen: Munksgaard , Vol. 1. p. 129-155 26 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterEducation

  67. Published

    Too late for regulatory management on Pacific oysters in European coastal waters?

    Hansen, B. W., Dolmer, P. & Vismann, Bent, 2023, In: Journal of Sea Research. 191, 13 p., 102331.

    Research output: Contribution to journalReviewResearchpeer-review

  68. Published

    Towards a standardisation of morphological measurements in the phylum Kinorhyncha

    González-Casarrubios, A., Cepeda, D., Pardos, F., Neuhaus, B., Yamasaki, H., Herranz, Maria, Grzelak, K., Maiorova, A., Adrianov, A., Dal Zotto, M., Di Domenico, M., Landers, S. C. & Sánchez, N., 2023, In: Zoologischer Anzeiger. 302, p. 217-223 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    Towards in silico CLIP-seq: predicting protein-RNA interaction via sequence-to-signal learning

    Horlacher, M., Wagner, N., Moyon, L., Kuret, K., Goedert, N., Salvatore, Marco, Ule, J., Gagneur, J., Winther, Ole & Marsico, A., 2023, In: Genome Biology. 24, 1, 37 p., 180.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    Towards routine chromosome-scale haplotype-resolved reconstruction in cancer genomics

    Garg, S., 2023, In: Nature Communications. 14, 1, 11 p., 1358.

    Research output: Contribution to journalJournal articleResearchpeer-review

  71. Published

    Transcription factor expression is the main determinant of variability in gene co-activity

    van Duin, Lucas, Krautz, Robert, Rennie, Sarah & Andersson, Robin, 2023, In: Molecular Systems Biology. 19, 7, 17 p., e11392.

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Published
  73. Published

    Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibility

    Salvatore, Marco, Horlacher, M., Marsico, A., Winther, Ole & Andersson, Robin, 2023, In: NAR Genomics and Bioinformatics. 5, 2, 10 p., 026.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    Treated like dirt: Robust forensic and ecological inferences from soil eDNA after challenging sample storage

    Frøslev, Tobias Guldberg, Ejrnæs, R., Hansen, Anders Johannes, Bruun, Hans Henrik, Nielsen, Ida Broman, Ekelund, Flemming, Vestergård, M. & Kjøller, Rasmus, 2023, In: Environmental DNA. 5, 1, p. 158-174 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Published

    Tree species traits and mycorrhizal association shape soil microbial communities via litter quality and species mediated soil properties

    Heděnec, P., Zheng, H., Siqueira, D. P., Lin, Q., Peng, Y., Schmidt, Inger Kappel, Frøslev, Tobias Guldberg, Kjøller, Rasmus, Rousk, J. & Vesterdal, Lars, 2023, In: Forest Ecology and Management. 527, 15 p., 120608.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Two Novel α-Thalassemia Mutations CD 39 -C [Thr > Pro] and CD 109 ACC > CCC [Thr > Pro] Identified in Two Chinese Families: A Case Report

    Zhang, W., Han, X., Deng, J., Zhou, R., Du, X., Wu, C. & Li, M., 2023, In: Hemoglobin. 47, 4, 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. Published

    Tyrosine kinases compete for growth hormone receptor binding and regulate receptor mobility and degradation

    Chhabra, Y., Seiffert, P., Gormal, R. S., Vullings, M., Lee, C. M. M., Wallis, T. P., Dehkhoda, F., Indrakumar, S., Jacobsen, Nina Louise, Lindorff-Larsen, Kresten, Durisic, N., Waters, M. J., Meunier, F. A., Kragelund, Birthe Brandt & Brooks, A. J., 2023, In: Cell Reports. 42, 5, 26 p., 112490.

    Research output: Contribution to journalJournal articleResearchpeer-review

  78. Published

    Ultrastructure and molecular phylogeny of Phalansterium foulumis sp. nov. (Amoebozoa Variosea)

    Karpov, S. A., Smakova, L. A., Malavin, S. A., Ekelund, Flemming & Smirnov, A. V., 2023, In: Protistology. 17, 3, p. 129-141 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. Published

    Uncertainty-aware and explainable machine learning for early prediction of battery degradation trajectory

    Rieger, L. H., Flores, E., Nielsen, K. F., Norby, P., Ayerbe, E., Winther, Ole, Vegge, T. & Bhowmik, A., 2023, In: Digital Discovery. 2, 1, p. 112-122 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  80. Published

    Uncovering spatiotemporal pattern of floods with Sentinel-1 synthetic aperture radar in major rice-growing river basins of Tanzania

    Sulle Michael, P., G. Sanga, H., J. Shitindi, M., Herzog, Max, L. Meliyo, J. & Massawe, B. H. J., 2023, In: Frontiers in Earth Science. 11, 15 p., 1183834.

    Research output: Contribution to journalJournal articleResearchpeer-review

  81. Published

    Underestimated Interannual Variability of Terrestrial Vegetation Production by Terrestrial Ecosystem Models

    Lin, S., Hu, Z., Wang, Y., Chen, X., He, B., Song, Z., Sun, S., Wu, C., Zheng, Y., Xia, X., Liu, L., Tang, Jing, Sun, Q., Joos, F. & Yuan, W., 2023, In: Global Biogeochemical Cycles. 37, 4, 15 p., e2023GB007696.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    Understanding intrinsically disordered proteins: from integrative modelling to design

    Pesce, Francesco, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 156 p.

    Research output: Book/ReportPh.D. thesisResearch

  83. Published

    Understanding the Role of Individual Residues in Proteins: a Study of Missense Variants and their Impact on Function

    Cagiada, Matteo, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 155 p.

    Research output: Book/ReportPh.D. thesisResearch

  84. Published

    Understory functional groups and fire history but not experimental warming drive tree seedling performance in unmanaged boreal forests

    Jessen, M. T., Krab, E. J., Lett, Signe, Nilsson, M., Teuber, L., Wardle, D. A. & Dorrepaal, E., 2023, In: Frontiers in Forests and Global Change. 6, 10 p., 1130532.

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. Published

    Unique horizontal gaze control in the box jellyfish, Tripedalia cystophora

    Wiisbye, S. H. & Garm, Anders Lydik, 2023, In: Vision Research. 203, 8 p., 108159.

    Research output: Contribution to journalJournal articleResearchpeer-review

  86. Published

    Unlocking environmental archives in the Arctic—insights from modern diatom-environment relationships in lakes and ponds across Greenland

    Weckström, K., Weckström, J., Wischnewski, J., Davidson, T. A., Lauridsen, T. L., Landkildehus, F., Christoffersen, Kirsten Seestern & Jeppesen, E., 2023, In: Frontiers in Ecology and Evolution. 11, 15 p., 1177638.

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Unraveling the genetic basis of neurological diseases and thalassemia: the clinical utility of high throughput sequencing

    ZHANG, W., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 117 p.

    Research output: Book/ReportPh.D. thesisResearch

  88. Published

    Unravelling animal–microbiota evolution on a chip

    Aizpurua Arrieta, Ostaizka, Blijleven, Kees, Trivedi, Urvish, Gilbert, M Thomas P & Alberdi, Antton, 2023, In: Trends in Microbiology. 31, 10, p. 995-1002 8 p.

    Research output: Contribution to journalReviewResearchpeer-review

  89. Published

    Unravelling the intricate interplay between the membrane, kinases and the intracellular domains of class 1 cytokine receptors

    Seiffert, P., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 248 p.

    Research output: Book/ReportPh.D. thesisResearch

  90. Published

    Unwrapping NPT Simulations to Calculate Diffusion Coefficients

    Bullerjahn, J. T., von Bülow, Sören, Heidari, M., Hénin, J. & Hummer, G., 2023, In: Journal of Chemical Theory and Computation. 19, 11, p. 3406-3417 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    Urbanization and the gut microbiota: A cross-sectional study in ethnicities living in southwest China

    Han, Mo, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 82 p.

    Research output: Book/ReportPh.D. thesisResearch

  92. Published

    Use and detection of a vitamin B1 degradation product yields new views of the marine B1 cycle and plankton metabolite exchange

    Paerl, R. W., Curtis, N. P., Bittner, Meriel Jennifer, Cohn, M. R., Gifford, S. M., Bannon, C. C., Rowland, E. & Bertrand, E. M., 2023, In: mBio. 14, 4, 21 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Published

    Use of Probiotics to Control Biofilm Formation in Food Industries

    Tomé, A. R., Carvalho, F. M., Teixeira-Santos, R., Burmølle, Mette, Mergulhão, F. J. M. & Gomes, L. C., 2023, In: Antibiotics. 12, 4, 17 p., 754.

    Research output: Contribution to journalReviewResearchpeer-review

  94. Published

    Using eDNA to find Micrognathozoa

    Giribet, G., Wangensteen, O. S., Garcés-Pastor, S., Møller, Peter Rask & Worsaae, Katrine, 2023, In: Current Biology. 33, 14, p. R756-R757

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. Published

    Vandkraft Versus Vandmiljø: Et opløftende eksempel fra De italienske Alper

    Scotti, A., Bottarin, R. & Jacobsen, Dean, 2023, In: Aktuel Naturvidenskab. 4, p. 38-42 5 p.

    Research output: Contribution to journalJournal articleCommunication

  96. Published

    Variation of extrachromosomal circular DNA in cancer cell lines

    dos Santos, Carl Henrik Rung, Hansen, Lasse Bøllehuus, Rojas Triana, Monica, Johansen, A. Z., Perez-Moreno, Mirna & Regenberg, Birgitte, 2023, In: Computational and Structural Biotechnology Journal. 21, p. 4207-4214 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Variational Open-Domain Question Answering

    Liévin, V., Motzfeldt, A. G., Jensen, I. R. & Winther, Ole, 2023, In: Proceedings of Machine Learning Research. 202, p. 20950-20977 28 p.

    Research output: Contribution to journalConference articleResearchpeer-review

  98. Published

    Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria

    Sahu, N., Indic, B., Wong-Bajracharya, J., Merényi, Z., Ke, H. M., Ahrendt, S., Monk, T. L., Kocsubé, S., Drula, E., Lipzen, A., Bálint, B., Henrissat, B., Andreopoulos, B., Martin, F. M., Bugge Harder, C., Rigling, D., Ford, K. L., Foster, G. D., Pangilinan, J., Papanicolaou, A. & 14 others, Barry, K., LaButti, K., Virágh, M., Koriabine, M., Yan, M., Riley, R., Champramary, S., Plett, K. L., Grigoriev, I. V., Tsai, I. J., Slot, J., Sipos, G., Plett, J. & Nagy, L. G., 2023, In: Nature Microbiology. 8, 27 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    Vitamin B1 Dynamics in Coastal Waters

    Bittner, Meriel Jennifer, 2023, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  100. Published

    Vocal interactivity in-and-between humans, animals and robots

    Chetouani, M., Briefer, Elodie, Dassow, A., Marxer, R., Moore, R. K., Obin, N. & Stowell, D., 2023, In: Interaction Studies. 24, 1, p. 1-4 4 p.

    Research output: Contribution to journalEditorialResearchpeer-review

  101. Published

    Volatile organic compound release across a permafrost-affected peatland

    Jiao, Yi, Davie-Martin, Cleo Lisa, Kramshøj, M., Christiansen, C. T., Lee, H., Althuizen, I. H. J. & Rinnan, Riikka, 2023, In: Geoderma. 430, 10 p., 116355.

    Research output: Contribution to journalJournal articleResearchpeer-review

Previous 1...3 4 5 6 7 8 9 10 ...168 Next