- 2023
- Published
Comparative molecular and morphological species delineation of Halammohydra Remane, 1927 (Hydrozoa): with the description of four new species
Tödter, L., Worsaae, Katrine & Schmidt-Rhaesa, A., 2023, In: Organisms Diversity and Evolution. 23, p. 455-476 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparison of In-Frame Deletion, Homology-Directed Repair, and Prime Editing-Based Correction of Duchenne Muscular Dystrophy Mutations
Zhao, X., Qu, Kunli, Curci, B., Yang, H., Bolund, L., Lin, L. & Luo, Y., 2023, In: Biomolecules. 13, 5, 15 p., 870.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Composition and distribution of diazotrophs in the Baltic Sea
Salamon Slater, E. R., Turk-kubo, K. A., Hallstrøm, S., Kesy, K., Laas, P., Magasin, J., Zehr, J. P., Labrenz, M. & Riemann, Lasse, 2023, In: Estuarine, Coastal and Shelf Science. 294, 12 p., 108527.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Compositional breakpoints of freshwater plant communities across continents
García-Girón, J., Heino, J., Båstrup-Spohr, Lars, Clayton, J., Winton, M. D., Feldmann, T., Fernández-Aláez, C., Ecke, F., Grillas, P., Hoyer, M. V., Kolada, A., Kosten, S., Lukács, B. A., Mjelde, M., Mormul, R. P., Rhazi, L., Rhazi, M., Sass, L., Xu, J. & Alahuhta, J., 2023, In: Limnetica. 42, 2, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Compromised junctional integrity phenocopies age-dependent renal dysfunction in Drosophila Snakeskin mutants
Dornan, A. J., Halberg, Kenneth Veland, Beuter, L. K., Davies, S. A. & Dow, J. A. T., 2023, In: Journal of Cell Science. 136, 19, 15 p., jcs261118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational and oligomeric states of SPOP from small-angle X-ray scattering and molecular dynamics simulations
Thomasen, Emil, Cuneo, M. J., Mittag, T. & Lindorff-Larsen, Kresten, 2023, In: eLife. 12, 23 p., e84147.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational entropy in molecular recognition of intrinsically disordered proteins
Skriver, Karen, Theisen, Frederik Friis & Kragelund, Birthe Brandt, 2023, In: Current Opinion in Structural Biology. 83, 8 p., 102697.Research output: Contribution to journal › Review › Research › peer-review
- Published
Confusion will be my epitaph: genome-scale discordance stifles phylogenetic resolution of Holothuroidea
Koch, N. M., Tilic, E., Miller, A. K., Stiller, Josefin & Rouse, G. W., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2002, 11 p., 20230988.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Congeneric temperate orchids recruit similar—yet differentially abundant—endophytic bacterial communities that are uncoupled from soil, but linked to host phenology and population size
Kaur, J., Harder, Christoffer Bugge & Sharma, J., 2023, In: American Journal of Botany. 110, 5, 16 p., e16168.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conjugative plasmids inhibit extracellular electron transfer in Geobacter sulfurreducens
Fessler, M., Madsen, Jonas Stenløkke & Zhang, Y., 2023, In: Frontiers in Microbiology. 14, 12 p., 1150091.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole-genome sequencing
Hernández-Alonso, G., Ramos-Madrigal, J., Sun, X., Scharff-Olsen, C. H., Sinding, M. H. S., Martins, N. F., Ciucani, M. M., Mak, S. S. T., Lanigan, L. T., Clausen, C. G., Bhak, J., Jeon, S., Kim, C., Eo, K. Y., Cho, S. H., Boldgiv, B., Gantulga, G., Unudbayasgalan, Z., Kosintsev, P. A., Stenøien, H. K. & 2 others, , 2023, In: Ecology and Evolution. 13, 8, 15 p., e10404.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Convergent molecular evolution of thermogenesis and circadian rhythm in Arctic ruminants
Li, M., Li, X., Wu, Z., Zhang, G., Wang, N., Dou, M., Liu, S., Yang, C., Meng, G., Sun, H., Hvilsom, C., Xie, G., Li, Y., Li, Z. H., Wang, W., Jiang, Y., Heller, Rasmus & Wang, Y., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 1999, 10 p., 20230538.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cooperative antibiotic resistance facilitates horizontal gene transfer
Wang, Q., Wei, S., Silva, A. F. & Madsen, Jonas Stenløkke, 2023, In: ISME Journal. 17, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cooperative microbial interactions drive spatial segregation in porous environments
Wu, Y., Fu, C., Peacock, C. L., Sørensen, Søren Johannes, Redmile-Gordon, M. A., Xiao, K. Q., Gao, C., Liu, J., Huang, Q., Li, Z., Song, P., Zhu, Y., Zhou, J. & Cai, P., 2023, In: Nature Communications. 14, 1, 14 p., 4226.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Crosstalk between tumor acidosis, p53 and extracellular matrix regulates pancreatic cancer aggressiveness
Czaplinska, D., Ialchina, Renata, Andersen, Henriette Berg, Yao, Jiayi, Stigliani, Arnaud, Dannesboe, Johs, Flinck, M., Chen, X., Mitrega, J., Gnosa, S. P., Dmytriyeva, O., Alves, F., Napp, J., Sandelin, Albin Gustav & Pedersen, Stine Helene Falsig, 2023, In: International Journal of Cancer. 152, 6, p. 1210-1225 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cultivation and sequencing of commensal bacteria of the human gut through culture-based and metagenomics analyses
ZOU, Y., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 154 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
DNA metabarcoding illuminates the contribution of small and very small prey taxa to the diet of lions
Groen, K., Beekenkamp, S., de Iongh, H. H., Lesilau, F., Chege, M., Narisha, L., Veldhuis, M., Bertola, Laura, van Bodegom, P. M. & Trimbos, K. B., 2023, In: Environmental DNA. 5, 6, p. 1321-1331 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deciphering regulatory mechanisms underlying gene co-activity
van Duin, Lucas, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 131 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Decoupled phylogenetic and functional diversity in European grasslands
Večeřa, M., Axmanová, I., Chytrý, M., Divíšek, J., Ndiribe, C., Mones, G. V., Čeplová, N., Aćić, S., Bahn, M., Bergamini, A., Boenisch, G., Biurrun, I., Bruun, H. H., Byun, C., Catford, J. A., Cerabolini, B. E. L., Cornelissen, J. H. C., Dengler, J., Jansen, F., Jansen, S. & 17 others, , 2023, In: Preslia. 95, 4, p. 413-445 33 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep integrative models for large-scale human genomics
Sigurdsson, Arnór Ingi, Louloudis, Ioannis, Banasik, Karina, Westergaard, David, Winther, Ole, Lund, O., Ostrowski, Sisse Rye, Erikstrup, C., Pedersen, Ole Birger Vesterager, Nyegaard, Mette, Brunak, Søren, Vilhjálmsson, B. & Rasmussen, Simon, 2023, In: Nucleic Acids Symposium Series. 51, 12, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem
Brodnicke, O. B., Meyer, H. K., Busch, K., Xavier, J. R., Knudsen, Steen Wilhelm, Møller, Peter Rask, Hentschel, U. H. & Sweet, M. J., 2023, In: Environmental DNA. 5, 6, p. 1405-1417 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deep-sequencing of viral genomes from a large and diverse cohort of treatment-naive HIV-infected persons shows associations between intrahost genetic diversity and viral load
INSIGHT START Study Group, I. S. S. G., 2023, In: PLOS Computational Biology. 19, 1, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DeepPeptide predicts cleaved peptides in proteins using conditional random fields
Teufel, Felix Georg, Refsgaard, J. C., Madsen, C. T., Stahlhut, C., Grønborg, M., Winther, Ole & Madsen, D., 2023, In: Bioinformatics (Oxford, England). 39, 10, 6 p., btad616.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deepened snow in combination with summer warming increases growing season nitrous oxide emissions in dry tundra, but not in wet tundra
Xu, W., Frendrup, L. L., Michelsen, Anders, Elberling, Bo & Ambus, Per Lennart, 2023, In: Soil Biology and Biochemistry. 180, 12 p., 109013.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Delayed benefits for fallow bucks: more fights decrease same day mating success, but increase matings the next day
Bateman-Neubert, A., Briefer, Elodie & McElligott, A. G., 2023, In: Animal Behaviour. 200, p. 37-48 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Den danske checkliste over bier er blevet opdateret
Madsen, Henning Bang, Calabuig, Isabel & Rasmussen, C., 2023Research output: Other contribution › Net publication - Internet publication › Communication
- Published
Deorphanizing Peptides Using Structure Prediction
Teufel, Felix Georg, Refsgaard, J. C., Kasimova, M. A., Deibler, K., Madsen, C. T., Stahlhut, C., Grønborg, M., Winther, Ole & Madsen, D., 2023, In: Journal of Chemical Information and Modeling. 63, 9, 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DermX: An end-to-end framework for explainable automated dermatological diagnosis
Jalaboi, R., Faye, F., Orbes-Arteaga, M., Jørgensen, D., Winther, Ole & Galimzianova, A., 2023, In: Medical Image Analysis. 83, 12 p., 102647.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Destabilization and degradation of Parkin and FLCN protein variants in hereditary disease
Bjørnkjær, Lene, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 188 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Detecting host responses to microbial stimulation using primary epithelial organoids
Lange, Jette Bornholdt, Müller, C. V., Nielsen, M. J., Strickertsson, J., Rago, D., Chen, Y., Maciag, Grzegorz Jerzy, Skov, Jonathan, Wellejus, A., Schweiger, P. J., Hansen, Stine Lind, Broholm, C., Gögenur, Ismail, Maimets, Martti, Sloth, S., Hendel, J., Baker, A., Sandelin, Albin Gustav & Jensen, Kim Bak, 2023, In: Gut Microbes. 15, 2, 16 p., 2281012.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Determination of heavy metals (Pb, Cr, As, Hg, and Cd) into the body organs of selected fish, water, sediment, and soil samples from Head Punjnad and Head Taunsa, Punjab, Pakistan
Iqbal, K. J., Khan, N., Fatima, M., Lashari, M. H., Asad, M., Ashraf, A., Fatima, H., Majeed, H., Baboo, I., Iqbal, K. J., Asghar, M., Saeed, Usama, Ali, W., Nazir, S., Bano, S. & Tanveer, A., 2023, In: PLoS ONE. 18, 9, 10 p., e0288163.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Development and application of new bioinformatic tools for large-scale population genomic study
ZHANG, YONG, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 103 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Development and validation of a minimally invasive and image-guided tape stripping method to sample atopic skin in children
Yélamos, O., Andersen, D., Pont, M., Iglesias, P., Potrony, M., Domínguez, M., Herrero, A., Alejo, B., Mateu, J., Røpke, Mads Almose, Danneskiold-Samsøe, Niels Banhos, Malvehy, J., Guy, R. H., Brix, S. & Puig, S., 2023, In: Clinical and Experimental Dermatology. 48, 2, p. 80-88 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Development of a novel SRAP-SCAR marker for rapid identification of lager and ale types in brewer's yeast
Liu, J., Cai, G., Li, X. & Lu, J., 2023, In: Molecular Biology Reports. 50, 6 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Did circular DNA shape the evolution of mammalian genomes?
Holt, Sylvester, Arrey Tané, Gerard & Regenberg, Birgitte, 2023, In: Trends in Biochemical Sciences. 48, 4, 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dietary diversity, sociality, and the evolution of ant gustation
Smith, E. J., Vizueta Moraga, Joel, Younger, M. A. A., Mullen, S. P. P. & Traniello, J. F. A., 2023, In: Frontiers in Ecology and Evolution. 11, 9 p., 1175719.Research output: Contribution to journal › Review › Research › peer-review
- Published
Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults
Li, Xuan Ji, Brejnrod, A., Thorsen, J., Zachariasen, Trine, Trivedi, Urvish, Russel, J., Vestergaard, G. A., Stokholm, Jakob, Rasmussen, Morten Arendt & Sørensen, Søren Johannes, 2023, In: Nature Communications. 14, 1, 16 p., 8526.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discordant upslope range shifts shuffle parasitoid-host species interactions
Colwell, R. K., 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 51, e2318022120.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Discovering functionally important sites in proteins
Cagiada, Matteo, Bottaro, S., Lindemose, Søren, Schenstrøm, S. M., Stein, Amelie, Hartmann-Petersen, Rasmus & Lindorff-Larsen, Kresten, 2023, In: Nature Communications. 14, 1, 13 p., 4175.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dissecting aneuploidy phenotypes by constructing Sc2.0 chromosome VII and SCRaMbLEing synthetic disomic yeast
Shen, Y., Gao, F., Wang, Y., Wang, Y., Zheng, J., Gong, J., Zhang, J., Luo, Z., Schindler, D., Deng, Y., Ding, W., Lin, T., Swidah, R., Zhao, H., Jiang, S., Zeng, C., Chen, S., Chen, T., Wang, Y., Luo, Y. & 11 others, , 2023, In: Cell Genomics. 3, 11, 19 p., 100364.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distribution patterns of selenium and its fractions in penguin and seal colony soil profiles in response to their population dynamics in maritime Antarctica
Shui, Y., Ye, W., Zhang, W., Yuan, L., Jiao, Yi, Sun, B., Zang, H., Yin, X. & Zhu, R., 2023, In: Polar Biology. 46, 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Do Nitrogen and Phosphorus Additions Affect Nitrogen Fixation Associated with Tropical Mosses?
Avila Clasen, Lina, Permin, Aya Tora Foged, Horwath, A. B., Metcalfe, D. B. & Rousk, Kathrin, 2023, In: Plants. 12, 7, 13 p., 1443.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DoxoDB: A Database for the Expression Analysis of Doxorubicin-Induced lncRNA Genes
Distefano, R., Ilieva, M., Madsen, J. H., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 4, 24 p., 39.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Draft genomes of seven isolates from Danish wastewater facilities belonging to Pseudomonas, Bacillus, Pseudochrobactrum, Brevundimonas, and Pandoraea
Maccario, Lorrie, Silva, A. F., Nesme, Joseph, Amador Hierro, Cristina Isabel, Sørensen, Søren Johannes, Cooper, V. S. & Røder, Henriette Lyng, 2023, In: Microbiology resource announcements. 12, 12, 4 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Drivers and ecology of Ceratium furcoides invasion of a Brazilian subtropical reservoir and its interaction with the phytoplankton community
Rojas-Castillo, O. A., Pereira, L., Buffon, P. & de Souza Cardoso, L., 2023, In: Limnologica. 101, 13 p., 126080.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Drying of Springs in the Himalayan Region of Nepal: Perspectives of Local Government Leaders on Causes, Consequences, and Conservation Efforts
Thapa, B., Bhattarai, C., Dahal, N., Tiwari, S. & Jacobsen, Dean, 2023, In: Mountain Research and Development. 43, 4, p. R9-R15 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic localization of the Na+-HCO3- co-transporter NBCn1 to the plasma membrane, centrosomes, spindle and primary cilia
Severin, M., Pedersen, E. L., Borre, M. T., Axholm, I., Christiansen, F. B., Ponniah, M., Czaplinska, D., Larsen, T., Pardo, L. A. & Pedersen, Stine Helene Falsig, 2023, In: Journal of Cell Science. 136, 7, 20 p., jcs260687.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic social interactions and keystone species shape the diversity and stability of mixed-species biofilms – an example from dairy isolates
Sadiq, F. A., De Reu, K., Steenackers, H., Van De Walle, A., Burmølle, Mette & Heyndrickx, M., 2023, In: ISME communications. 3, 1, 12 p., 118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
ERK and USP5 govern PD-1 homeostasis via deubiquitination to modulate tumor immunotherapy
Xiao, X., Shi, J., He, C., Bu, X., Sun, Y., Gao, M., Xiang, B., Xiong, W., Dai, P., Mao, Q., Xing, X., Yao, Y., Yu, H., Xu, G., Li, S., Ren, Y., Chen, B., Jiang, C., Meng, G., Lee, Y. R. & 4 others, , 2023, In: Nature Communications. 14, 1, 19 p., 2859.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ecological Indicator Values for Europe (EIVE) 1.0
Dengler, J., Jansen, F., Chusova, O., Hüllbusch, E., Nobis, M. P., Van Meerbeek, K., Axmanová, I., Bruun, H. H., Chytrý, M., Guarino, R., Karrer, G., Moeys, K., Raus, T., Steinbauer, M. J., Tichý, L., Tyler, T., Batsatsashvili, K., Bita-Nicolae, C., Didukh, Y., Diekmann, M. & 14 others, , 2023, In: Vegetation Classification and Survey. 4, p. 7-29 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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8970
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Published -
7454
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research
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Complexity of avian evolution revealed by family-level genomes
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A region of suppressed recombination misleads neoavian phylogenomics
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