Department of Biology

 

 
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  1. Published

    Complex pattern formation of marine gradient bacteria explained by a simple computer model

    Thar, R. & Fenchel, Tom, 2005, In: FEMS Microbiology Letters. 246, p. 75-59

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Survey of Motile Microaerophilic Bacterial Morphotypes in the Oxygen Gradient above a Marine Sulfidic Sediment

    Thar, R. & Fenchel, Tom, 2005, In: Applied and Environmental Microbiology. 71(7), p. 3682-3691

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Bacteria are not too small for spatial sensing of chemical gradients: An experimental evidence

    Thar, R. & Kühl, Michael, 2003, In: Proceedings of the National Academy of Science of the United States of America. 100, 10, p. 5748-5753

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Propagation of electromagnetic radiation in mitochondria?

    Thar, R. & Kühl, Michael, 2004, In: Journal of Theoretical Biology. 230, p. 261-270

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Fiber-optic fluorometer for microscale mapping of photosynthetic pigments in microbial communities

    Thar, R. M., Kühl, Michael & Holst, G., 2001, In: Applied and Environmental Microbiology. 67, 6, p. 2823-2828

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    True Chemotaxis in Oxygen Gradients of the Sulfur-Oxidizing Bacterium Thiovulum majus

    Thar, R. M. & Fenchel, Tom, 2001, In: Applied and Environmental Microbiology. 67(7), p. 3299-3303

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Conspicuous veils formed by vibrioid bacteria on sulfidic marine sediment

    Thar, R. M. & Kühl, Michael, 2002, In: Applied and Environmental Microbiology. 68, 12, p. 6310-6320

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    A new system for three-dimensional tracking of motile microorganisms

    Thar, R. M., Blackburn, N. & Kühl, Michael, 2000, In: Applied and Environmental Microbiology. 66, p. 2238-2242

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Motility of Marichromatium gracile in Response to Light, Oxygen, and Sulfide

    Thar, R. M. & Kühl, Michael, 2001, In: Applied and Environmental Microbiology. 67, 12, p. 5410-5419

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Suppression of parasite-specific response in Plasmodium falciparum malaria. A longitudinal study of blood mononuclear cell proliferation and subset composition

    Theander, Thor Grundtvig, Bygbjerg, Ib Christian, Andersen, B. J., Jepsen, S., Kharazmi, A. & Ødum, Niels, 1986, In: Scandinavian Journal of Immunology. 24, 1, p. 73-81 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Inhibition of human lymphocyte proliferation and cleavage of interleukin-2 by Pseudomonas aeruginosa proteases

    Theander, Thor Grundtvig, Kharazmi, A., Pedersen, Bente Klarlund, Christensen, L. D., Tvede, N., Poulsen, Lars K., Ødum, Niels, Svenson, M. & Bendtzen, K., 1988, In: Infection and Immunity. 56, 7, p. 1673-7 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Bacterial carbon biomass calculated from biovolumes

    Theil-Nielsen, J. & Søndergaard, M., 1998, In: Archiv fuer Hydrobiologie. Supplement Volumes, Monographic Studies. 141.2, p. 195-207

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Transcription factor-driven coordination of cell cycle exit and lineage-specification in vivo during granulocytic differentiation: In memoriam Professor Niels Borregaard

    Theilgaard-Mønch, Kim, Pundhir, Sachin, Reckzeh, K., Su, Jinyu, Tapia, Marta Cecylia, Furtwängler, Benjamin, Jendholm, J., Jakobsen, J. S., Hasemann, M. S., Knudsen, K. J., Cowland, J. B., Fossum, A., Schoof, E., Schuster, Mikkel Bruhn & Porse, Bo Torben, 2022, In: Nature Communications. 13, 1, 17 p., 3595.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Genetic variation in six species of sacoglossan opisthobranchs

    Theisen, B. F. & Jensen, K. R., 1991, In: Journal of Molluscan Studies. 57(2), p. 267-75

    Research output: Contribution to journal › Journal article › Research

  15. Published

    Origin of clonal diversity in triploid parthenohenetic trichoniscus Pusillus pusillus (Isopoda, Crustecea) based upon allozyme and nucleotide sequence data

    Theisen, B. F., Christensen, B. & Arctander, P., 1995, In: Journal of Evolutionary Biology. 8, p. 71-80

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Morphological and physiological studies on the olfactory organ of the striped eel catfish, PLOTOSUS LINEATUS

    Theisen, B., Zeiske, E., Silver, W., Marui, T. & Caprio, J., 1991, In: Marine Biology. Vol 110, p. 127-135

    Research output: Contribution to journal › Journal article › Research

  17. Published

    αα-hub coregulator structure and flexibility determine transcription factor binding and selection in regulatory interactomes

    Theisen, Frederik Friis, Salladini, Edoardo, Davidsen, R., Rasmussen, C. J., Staby, L., Kragelund, Birthe Brandt & Skriver, Karen, 2022, In: Journal of Biological Chemistry. 298, 6, 16 p., 101963.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The Behaviour of Short Linear Motifs in the DREB2A Transcription Factor and the Effect of Molecular Context

    Theisen, Frederik Friis, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 160 p.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    Molecular switching in transcription through splicing and proline-isomerization regulates stress responses in plants

    Theisen, Frederik Friis, Prestel, Andreas, Elkjær, Steffie Martina H, Leurs, Y. H. A., Morffy, N., Strader, L. C., O'Shea, Charlotte, Teilum, Kaare, Kragelund, Birthe Brandt & Skriver, Karen, 2024, In: Nature Communications. 15, 1, 13 p., 592.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Quantification of Conformational Entropy Unravels Effect of Disordered Flanking Region in Coupled Folding and Binding

    Theisen, Frederik Friis, Staby, L., Tidemand, Frederik Grønbæk, O'Shea, Charlotte, Prestel, Andreas, Willemoës, Martin, Kragelund, Birthe Brandt & Skriver, Karen, 2021, In: Journal of the American Chemical Society. 143, 36, p. 14540-14550 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    How genomics can help biodiversity conservation

    The European Reference Genome Atlas Consortium, T. E. R. G. A. C., 2023, In: Trends in Genetics. 39, 7, 15 p.

    Research output: Contribution to journal › Review › Research › peer-review

  22. Published

    Phylogeny of Himantormia - an Antarctic genus in the Parmeliaceae (lichenized ascomycetes).

    Thell, A., Søchting, Ulrik, Kärnefelt, I., Elix, J. E. & Sancho, L. G., 2007, In: Bibliotheca Lichenologica. 95, p. 531-541 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Xanthoparmelia lineola sensu lato in Australia and North America

    Thell, A., Elix, J. A. & Søchting, Ulrik, 2009, In: Bibliotheca Lichenologica. 99, p. 393-404

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Declining genetic diversity of European honeybees along the twentieth century

    Themudo, G. E., Rey de la Iglesia, Alba, Tascón, L. R., Jensen, Annette Bruun, Rodrigues da Fonseca, Rute Andreia & Campos, P. F., 29 Jun 2020, In: Scientific Reports. 10, 12 p., 10520.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Large effective population size and temporal genetic stability in Atlantic cod (Gadus morhua) in the southern Gulf of St. Lawrence

    Therkildsen, N. O., Nielsen, E. E., Swain, D. P. & Pedersen, Jes Søe, Oct 2010, In: Canadian Journal of Fisheries and Aquatic Sciences. 67, 10, p. 1585–1595

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Lidar-derived variables as a proxy for fungal species richness and composition in temperate Northern Europe

    Thers, H., Brunbjerg, A. K., Læssøe, Thomas, Ejrnæs, R., Bøcher, P. K. & Svenning, J., Oct 2017, In: Remote Sensing of Environment. 200, p. 102-113 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Investigation of transcriptional output and regulation in plants using Cap Analysis of Gene Expression (CAGE)

    Thieffry, A., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 128 p.

    Research output: Book/Report › Ph.D. thesis › Research

  28. Published

    PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave

    Thieffry, A., López Márquez, Diego, Lange, Jette Bornholdt, Gholami Malekroudi, M., Bressendorff, Simon, Barghetti, A., Sandelin, Albin Gustav & Brodersen, Peter, 2022, In: The Plant Cell. 34, 7, 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways

    Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Genetic variation of inbreeding depression among floral and fitness traits in Silene nutans

    Thiele, J., Hansen, T. M., Siegismund, Hans Redlef & Hauser, T. P., 2010, In: Heredity. 104, 1, p. 52-60 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Range size patterns in European freshwater trematodes

    Thieltges, D., Hof, C., Borregaard, Michael Krabbe, Dehling, M., Brändle, M., Brandl, R. & Poulin, R., 2011, In: Ecography. 34, 6, p. 982-989 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Host diversity and latitude drive the trematode diversity patterns in the European freshwater fauna

    Thieltges, D. W., Hof, C., Dehling, D. M., Brändle, M., Brandl, R. & Poulin, R., 2011, In: Global Ecology and Biogeography. 20, 5, p. 675-682 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Reconstruction of annual growth in relation to summer temperatures and translocation of nutrients in the aquatic moss Drepanocladus trifarius from West Greenland

    Thiemer, K., Christiansen, D. M., Petersen, N. S., Mortensen, S. M. & Christoffersen, Kirsten Seestern, 2018, In: Polar Biology. 41, 11, p. 2311-2321

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Sulphide tolerance of the marine nematode Oncholaimus campylocercoides - a result of internal sulphur formation?

    Thiermann, F., Vismann, Bent & Giere, O., 2000, In: Marine Ecology - Progress Series. 193, p. 251-259

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    The γ-hydroxybutyric acid (GHB) analogue NCS-382 is a substrate for both monocarboxylate transporters subtypes 1 and 4

    Thiesen, L., Belew, Zeinu Mussa, Griem-Krey, Nane, Pedersen, Stine Helene Falsig, Crocoll, C., Nour-Eldin, Hussam Hassan & Wellendorph, Petrine, 15 Feb 2020, In: European Journal of Pharmaceutical Sciences. 143, p. 1-9 105203.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Escherichia coli belonging to ST131 rarely transfers blactx-m-15 to fecal Escherichia coli

    Thingholm, K. R., Hertz, F. B., Løbner-Olesen, Anders, Frimodt-Møller, N. & Nielsen, K. L., 2019, In: Infection and Drug Resistance. 12, p. 2429-2435

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Ecology impacts the decrease of Spirochaetes and Prevotella in the fecal gut microbiota of urban humans

    Thingholm, L. B., Bang, C., Rühlemann, M. C., Starke, A., Sicks, F., Kaspari, V., Jandowsky, A., Froelich, K., Ismer, G., Bernhard, A., Bombis, C., Struve, B., Rausch, P. & Franke, A., 2021, In: BMC Microbiology. 21, 20 p., 276.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Preliminary distribution maps of bryophytes in Denmark, vol. 3 (musci j-z) in: Söderström, L. Preliminary distribution maps of bryophytes in northwestern Europe vol. 3 (musci j-z)

    Thingsgaard, K. & Damsholt, K., 1998, Trondheim, Norge: Mossornas Vänner. 69 p.

    Research output: Book/Report › Book › Research

  39. Published

    Ability of a "minimum" microbial food web model to reproduce response patterns observed in mesocosms manipulated with N and P, glucose, and Si

    Thingstad, T. F., Havskum, H., Zweifel, U. L., Berdalet, E., Sala, M. M., Peters, F., Alcaraz, M., Scharek, R., Perez, M., Jacquet, S., Flaten, G. A. F., Dolan, J. R., Marrasé, C., Rassoulzadegan, F., Hagstrøm, Å. & Vaulot, D., 2007, In: Journal of Marine Systems 64. 64, p. 15-34

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Control of bacterial production in cold waters. A theoretical analysis of mechanisms relating bacterial production and zooplankton biomass in Disco Bay, Western Greenland

    Thingstad, T. F., Nielsen, T. G., Hansen, A. S. & Levinsen, H., 2002, In: Marine Ecology - Progress Series. 228, p. 15-24

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Quantification of fungal activity in arbuscular mycorrhizal symbiosis by polyacrylamide gel electrophoresis and densitometry of malate dehydrogenase

    Thingstrup, I. & Rosendahl, Søren, 1994, In: Soil. Biol. Biochem.. 26, p. 1483-1489

    Research output: Contribution to journal › Journal article › Research

  42. Published

    Assessment of fungicide side effects on vesicular-arbuscular mycorrhiza

    Thingstrup, I., Ravnskov, S. & Rosendahl, Søren, 1992, Proceedings of the International Symposium on Environmental Aspects of Pesticide Microbiology. Sverige, p. 37-41

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  43. Published

    Detection of the arbuscular mycorrhizal fungus Scutellospora heterogama within roots using polyclonal antibodies

    Thingstrup, I., Dodd, J. C., Rozycka, M., Jeffries, P. & Rosendahl, Søren, 1995, In: Mycological Research. 99, p. 1225-1232

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Hyperosmotic stress induces Rho/Rho kinase/LIM kinase-mediated cofilin phosphorylation in tubular cells: key role in the osmotically triggered F-actin response

    Thirone, A. C. P., Speight, P., Zulys, M., Rotstein, O. D., Szaszi, K., Pedersen, Stine Helene Falsig & Kapus, A., 2009, In: American Journal of Physiology: Cell Physiology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Population dynamics of the fast-growing sub-populations of Pseudomonas and total bacteria, and their protozoan grazers, revealed by fenpropimorph treatment

    Thirup, L., Ekelund, Flemming, Johnsen, K. E. & Jacobsen, C. S., 2000, In: Soil Biology & Biochemistry. 32, 11-12, p. 1615-1623

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    CAGEfightR: Cap Analysis of Gene Expression (CAGE) in R/Bioconductor

    Thodberg, Malte, Thieffry, A., Vitting-Seerup, K., Andersson, Robin & Sandelin, Albin Gustav, Apr 2018

    Research output: Other contribution › Research

  47. Published

    Comprehensive profiling of the fission yeast transcription start site activity during stress and media response

    Thodberg, Malte, Thieffry, A., Lange, Jette Bornholdt, Boyd, M., Holmberg, Christian, Azad, A., Workman, C. T., Chen, Y., Ekwall, K., Nielsen, Olaf & Sandelin, Albin Gustav, 28 Feb 2019, In: Nucleic Acids Research. 47, 4, p. 1671-1691 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Organism- and disease-specific atlases of transcription start sites using Cap Analysis of Gene Expression (CAGE)

    Thodberg, Malte, 2018, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  49. Published

    A step-by-step guide to analyzing CAGE data using R/Bioconductor

    Thodberg, Malte & Sandelin, Albin Gustav, 18 Jun 2019, In: F1000Research. 8, 49 p., 886.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    CAGEfightR: analysis of 5'-end data using R/Bioconductor

    Thodberg, Malte, Thieffry, A., Vitting-Seerup, K., Andersson, Robin & Sandelin, Albin Gustav, 2019, In: BMC Bioinformatics. 20, 13 p., 487.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Effect of acidification on an Arctic phytoplankton community from Disko Bay, West Greenland

    Thoisen, C., Riisgaard, K., Lundholm, Nina, Nielsen, T. G. & Hansen, Per Juel, 2015, In: Marine Ecology - Progress Series. 520, p. 21-34 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Traditional plant functional groups explain variation in economic but not size-related traits across the tundra biome

    Thomas, H. J. D., Myers-Smith, I. H., Bjorkman, A. D., Elmendorf, S. C., Blok, D., Cornelissen, J. H. C., Forbes, B. C., Hollister, R. D., Normand, S., Prevéy, J. S., Rixen, C., Schaepman-Strub, G., Wilmking, M., Wipf, S., Cornwell, W. K., Kattge, J., Goetz, S. J., Guay, K. C., Alatalo, J. M., Anadon-Rosell, A. & 69 others, Angers-Blondin, S., Berner, L. T., Björk, R. G., Buchwal, A., Buras, A., Carbognani, M., Christie, K., Collier, L. S., Cooper, E. J., Eskelinen, A., Frei, E. R., Grau, O., Grogan, P., Hallinger, M., Heijmans, M. M. P. D., Hermanutz, L., Hudson, J. M. G., Hülber, K., Iturrate-Garcia, M., Iversen, C. M., Jaroszynska, F., Johnstone, J. F., Kaarlejärvi, E., Kulonen, A., Lamarque, L. J., Lévesque, E., Little, C. J., Michelsen, Anders, Milbau, A., Nabe-Nielsen, J., Nielsen, S. S., Ninot, J. M., Oberbauer, S. F., Olofsson, J., Onipchenko, V. G., Petraglia, A., Rumpf, S. B., Semenchuk, P. R., Soudzilovskaia, N. A., Spasojevic, M. J., Speed, J. D. M., Tape, K. D., te Beest, M., Tomaselli, M., Trant, A., Treier, U. A., Venn, S., Vowles, T., Weijers, S., Zamin, T., Atkin, O. K., Bahn, M., Blonder, B., Campetella, G., Cerabolini, B. E. L., Chapin, F. S., Dainese, M., de Vries, F. T., Díaz, S., Green, W., Jackson, R. B., Manning, P., Niinemets, Ü., Ozinga, W. A., Peñuelas, J., Reich, P. B., Schamp, B., Sheremetev, S. & van Bodegom, P. M., 2019, In: Global Ecology and Biogeography. 28, 2, p. 78-95

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Global plant trait relationships extend to the climatic extremes of the tundra biome

    Thomas, H. J. D., Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Kattge, J., Diaz, S., Vellend, M., Blok, D., Cornelissen, J. H. C., Forbes, B. C., Henry, G. H. R., Hollister, R. D., Normand, S., Prevéy, J. S., Rixen, C., Schaepman-Strub, G., Wilmking, M., Wipf, S., Cornwell, W. K., Beck, P. S. A. & 85 others, Georges, D., Goetz, S. J., Guay, K. C., Rüger, N., Soudzilovskaia, N. A., Spasojevic, M. J., Alatalo, J. M., Alexander, H. D., Anadon-Rosell, A., Angers-Blondin, S., te Beest, M., Berner, L. T., Björk, R. G., Buchwal, A., Buras, A., Carbognani, M., Christie, K. S., Collier, L. S., Cooper, E. J., Elberling, Bo, Eskelinen, A., Frei, E. R., Grau, O., Grogan, P., Hallinger, M., Heijmans, M. M. P. D., Hermanutz, L., Hudson, J. M. G., Johnstone, J. F., Hülber, K., Iturrate-Garcia, M., Iversen, C. M., Jaroszynska, F., Kaarlejarvi, E., Kulonen, A., Lamarque, L. J., Lantz, T. C., Lévesque, E., Little, C. J., Michelsen, Anders, Milbau, A., Nabe-Nielsen, J., Nielsen, S. S., Ninot, J. M., Oberbauer, S. F., Olofsson, J., Onipchenko, V. G., Petraglia, A., Rumpf, S. B., Shetti, R., Speed, J. D. M., Suding, K. N., Tape, K. D., Tomaselli, M., Trant, A. J., Treier, U. A., Tremblay, M., Venn, S. E., Vowles, T., Weijers, S., Wookey, P. A., Zamin, T. J., Bahn, M., Blonder, B., van Bodegom, P. M., Bond-Lamberty, B., Campetella, G., Cerabolini, B. E. L., Chapin, F. S., Craine, J. M., Dainese, M., Green, W. A., Jansen, S., Kleyer, M., Manning, P., Niinemets, Onoda, Y., Ozinga, W. A., Peñuelas, J., Poschlod, P., Reich, P. B., Sandel, B., Schamp, B. S., Sheremetiev, S. N. & de Vries, F. T., 2020, In: Nature Communications. 11, 1, 12 p., 1351.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Towards an integrated understanding of the consequences of fungus domestication on the fungus-growing termite gut microbiota

    Poulsen, Michael, 2015, In: Environmental Microbiology. 17, 8, p. 2562-2572 11 p.

    Research output: Contribution to journal › Review › Research › peer-review

  55. Published

    The role of symbiont genetic distance and potential adaptability in host preference towards Pseudonocardia symbionts in Acromyrmex leaf-cutting ants

    Poulsen, Michael, Maynard, J., Roland, D. L. & Currie, C. R., 2011, In: Journal of Insect Science. 11, 1, p. 1-12

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Complementary symbiont contributions to plant decomposition in a fungus-farming termite

    Thomas-Poulsen, M., Hu, H., Li, C., Chen, Z., Xu, L., Otani, S., Nygaard, S., Nobre, T., Klaubauf, S., Schindler, P. M., Hauser, F., Pan, H., Yang, Z., Sonnenberg, A. S. M., de Beer, Z. W., Zhang, Y., Wingfield, M. J., Grimmelikhuijzen, C., de Vries, R. P., Korb, J. & 4 others, Aanen, D. K., Wang, J., Boomsma, Jacobus J. & KU, thw266, 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 40, 6 p., 14500-14505.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Integrating coarse-grained molecular dynamics simulations with small-angle X-ray scattering data to characterize multidomain proteins and their assemblies

    Thomasen, Emil, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 205 p.

    Research output: Book/Report › Ph.D. thesis › Research

  58. Published

    Conformational ensembles of intrinsically disordered proteins and flexible multidomain proteins

    Thomasen, Emil & Lindorff-Larsen, Kresten, 2022, In: Biochemical Society Transactions. 50, 1, p. 541-554 14 p.

    Research output: Contribution to journal › Review › Research › peer-review

  59. Published

    Improving Martini 3 for Disordered and Multidomain Proteins

    Thomasen, Emil, Pesce, Francesco, Roesgaard, M. A., Tesei, Giulio & Lindorff-Larsen, Kresten, 2022, In: Journal of Chemical Theory and Computation. 18, 4, p. 2033-2041 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Conformational and oligomeric states of SPOP from small-angle X-ray scattering and molecular dynamics simulations

    Thomasen, Emil, Cuneo, M. J., Mittag, T. & Lindorff-Larsen, Kresten, 2023, In: eLife. 12, 23 p., e84147.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Fremme af spontan vegetation efter gran

    Thomasen, J. M., Kepfer Rojas, Sebastian, Båstrup-Spohr, Lars & Raulund-Rasmussen, Karsten, 22 Apr 2024, 6 p. Institut for Geovidenskab og Naturforvaltning, Københavns Universitet.

    Research output: Other contribution › Net publication - Internet publication › Communication

  62. Published

    Effects of Lifetime Exposures to Environmental Contaminants on the Adult Gut Microbiome

    Thompson, K. N., Oulhote, Y., Weihe, P., Wilkinson, J. E., Ma, S., Zhong, H., Li, J., Kristiansen, Karsten, Huttenhower, C. & Grandjean, P., 2022, In: Environmental Science & Technology. 56, 23, p. 16985-16995 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Identification of BLNK and BTK as mediators of rituximab-induced programmed cell death by CRISPR screens in GCB-subtype diffuse large B-cell lymphoma

    Thomsen, E. A., Rovsing, A. B., Anderson, M. V., Due, H., Huang, J., Luo, Y., Dybkær, K. & Mikkelsen, J. G., 2020, In: Molecular Oncology. 14, 9, p. 1978-1997 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Fytoplankton og heterotroft nanoplankton

    Thomsen, H. A., Hansen, Gert, Larsen, Jacob, Moestrup, Øjvind & Vørs, N., 1992, Planktondynamik og stofomsætning i Kattegat. Fenchel, T. (ed.). Miljøstyrelsen, Vol. 10. p. 31-59 29 p. (Havforskning fra Miljøstyrelsen, Vol. 10).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  65. Published

    Follow the leader? Orange-fronted conures eavesdrop on conspecific vocal performance and utilise it in social decisions

    Thomsen, Heidi Maria, Balsby, T. J. S. & Dabelsteen, Torben, 2021, In: PLoS ONE. 16, 6, 22 p., e0252374.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Individual variation in the contact calls of the monomorphic Peach-fronted Conure, Aratinga aurea, and its potential role in communication

    Thomsen, Heidi Maria, Balsby, T. J. S. & Dabelsteen, Torben, 2013, In: Bioacoustics - the International Journal of Animal Sound and its Recording. 22, 3, p. 215-227 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    The imitation dilemma: can parrots maintain their vocal individuality when imitating conspecifics?

    Thomsen, Heidi Maria, Balsby, T. J. S. & Dabelsteen, Torben, 2019, In: Behaviour. 156, 5-8, p. 787-814 28 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Flock social behaviour and vocal communication in Eupsittula conures

    Thomsen, Heidi Maria, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 195 p.

    Research output: Book/Report › Ph.D. thesis › Research

  69. Published

    Loricate choanoflagellates from West Greenland (August 1988) including the description of Spinoeca buckii gen. et sp. nov.

    Thomsen, H. A., Østergaard, J. B. & Hansen, L. E., 1995, In: European Journal of Protistology. 31, p. 38-44

    Research output: Contribution to journal › Journal article › Research

  70. Published

    Loricabærende Choanoflagellater (Kraveflagellater)

    Thomsen, H. A., 1992, Plankton i de indre danske farvande. Havforskning fra Miljøstyrelsen. Danmark, p. 157-194

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  71. Published

    Lennoxia faveolata gen. et sp. nov. (Diatomophyceae) from South America, California, West Greenland and Denmark

    Thomsen, H. A., Buck, K. R., Marino, D., Sarno, D., Hansen, L. E., Østergaard, J. B. & Krupp, J., 1993, In: Phycologia. 32 (4), p. 278-283

    Research output: Contribution to journal › Journal article › Research

  72. Published

    Three new species of Thaumatomastix (Thaumatomastigidae, Protista incertae sedis), a ubiquitous genus from the Antarctic Ice Biota

    Thomsen, H. A., Kosman, C. & Ikävalko, J., 1995, In: European Journal of Protistology. 312, p. 174-181

    Research output: Contribution to journal › Journal article › Research

  73. Published

    Choanoflagellate diversity with particular emphasis on the Acanthoecidae

    Thomsen, H. A. & Buck, K. R., 1991, The Biology of Free-living Heterotrophic Flagellates, 45. Storbritannien, p. 259-284

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  74. Published

    Heteromorphic life histories in arctic coccolithophorids (Prymnesiophyceae)

    Thomsen, H. A., Buch Østergaard, J. & Evald Hansen, L., 1991, In: Journal of Phycology. 27, p. 634-642

    Research output: Contribution to journal › Journal article › Research

  75. Published

    Loricate choanoflagellates (Acanthoecidae, Choanoflagellida) from the Weddell Sea, Antarctica

    Thomsen, H. A., Buck, K. R., Coale, S. L., Garrison, D. L. & Gowing, M. M., 1990, In: Zoologica Scripta. vol.19, no.4, p. 367-387

    Research output: Contribution to journal › Journal article › Research

  76. Published

    Haptophytes as components of marine phytoplankton

    Thomsen, H. A., Buck, K. R. & Chavez, F. P., 1994, The Haptophyte Algae. Systematics Association Special Volume nr. 51. Oxford, UK: Clarendon Press, p. 187-208

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  77. Published

    New observations on the heterotrophic protist genus Thaumatomastix (Thaumatomastigaceae, Protista incerta sedis), with particular emphasis on material from the Baltic Sea

    Thomsen, H. A., Hällfors, G., Hällfors, S. & Ikävalko, J., 1993, In: Ann. Bot. Fennici. 30, p. 87-108

    Research output: Contribution to journal › Journal article › Research

  78. Published

    Loricate choanoflagellates of the Southern Ocean with new observations on cell division in Bicosta spinifera (Throndsen, 1970) from Antarctica and Saroeca attenuata Thomsen, 1979, from the Baltic Sea

    Thomsen, H. A. & Larsen, J., 1992, In: Polar Biology. 12, p. 53-63

    Research output: Contribution to journal › Journal article › Research

  79. Published

    Plankton i de indre danske farvande

    Thomsen, H. A., 1992, Danmark: Miljøministeriet. 331 p.

    Research output: Book/Report › Book › Research

  80. Published

    The ultrastructure of Commation gen. nov. (Stramenopiles Incertae Sedis), a genus of heterotrophic nanoplanktonic flagellates from Antarctic waters

    Thomsen, H. A. & Larsen, J., 1993, In: European Journal of Protistology. 29, p. 462-477

    Research output: Contribution to journal › Journal article › Research

  81. Published

    Fine structure and biology of Cryothecomonas gen.nov. (Protista incertae sedis) from the ice biota

    Thomsen, H. A., Buck, K. R., Bolt, P. A. & Garrison, D. L., 1991, In: Can. J. Zool.. 69, p. 1048-1070

    Research output: Contribution to journal › Journal article › Research

  82. Published

    Choanoflagellates of the Central California waters: taxonomy, morphology and species assemblages

    Thomsen, H. A., Buck, K. R. & Chavez, F. P., 1991, In: Marine Biology Research. 33, p. 131-164

    Research output: Contribution to journal › Journal article › Research

  83. Published

    Mikroorganismer i havis

    Thomsen, H. A., 1995, In: Naturens Verden. 10, p. 371-379

    Research output: Contribution to journal › Journal article › Research

  84. Published

    Ericiolus gen. nov. (Prymnesiophyceae), a new coccolithophorid genus from polar and temperate regions

    Thomsen, H. A., Bjørn, P. P., Højlund, L., Olesen, J. & Pedersen, J. B., 1995, In: European Journal of Phycology. 30, p. 29-34

    Research output: Contribution to journal › Journal article › Research

  85. Published

    Species of Thaumatomastix (Thaumatomastigidae, Protista Incertae Sedis) from the Arctic Sea ice biota (North East Water Polynya, North East Greenland)

    Thomsen, H. A., 1997, In: Journal of Marine Systems. 10, p. 263-277

    Research output: Contribution to journal › Journal article › Research

  86. Published

    Choano flagellates (Acanthoecidae, Choanoflagellida) from the Weddell Sea, Antarctica, taxonomy and community structure with particular emphasis on the ice biota, with preliminary remarks on ch.......

    Thomsen, H. A., Garrison, D. L. & Kosman, C., 1997, In: Archiw für Prolistenkunde. 148, p. 77-114

    Research output: Contribution to journal › Journal article › Research

  87. Published

    Svampe, mos og lav som mikrohabitater

    Thomsen, Iben Margrete, Skov, Simon & Bergstedt, C. E., 2019, In: Videnblade Park og Landskab. November 2019, 06.08-08, 2 p.

    Research output: Contribution to journal › Journal article › Communication

  88. Published

    Prolonged administration of recombinant human erythropoietin increases submaximal performance more than maximal aerobic capacity.

    Thomsen, J. J., Rentsch, R. L., Robach, P., Calbet, J. A. L., Boushel, R., Rasmussen, P., Juel, C. & Lundby, C., 2007, In: European Journal of Applied Physiology. 101, 4, p. 481-6 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Transient intermediary states with high and low folding probabilities in the apparent two-state folding equilibrium of ACBP at low pH

    Thomsen, J. K., Kragelund, Birthe Brandt, Teilum, Kaare, Knudsen, J. & Poulsen, F. M., 2002, In: Journal of Molecular Biology. 318, 3, p. 805-14 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Deep Learning for Diagnostic Binary Classification of Multiple-Lesion Skin Diseases

    Thomsen, K., Christensen, A. L., Iversen, L., Lomholt, H. B. & Winther, Ole, 2020, In: Frontiers in Medicine. 7, 7 p., 574329.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Systematic review of machine learning for diagnosis and prognosis in dermatology

    Thomsen, K., Iversen, L., Titlestad, T. L. & Winther, Ole, 2020, In: Journal of Dermatological Treatment. 31, 5, p. 496-510

    Research output: Contribution to journal › Review › Research › peer-review

  92. Published

    Effect of cell shrinkage on apical and basolateral sodium permeability of isolated frog skin

    Thomsen, L. & Nielsen, R., 1991, In: Acta Physiologica (Print Edition). 143, p. 6A

    Research output: Contribution to journal › Journal article › Research

  93. Published

    Advanced computer control of electrophysiological experimentation

    Thomsen, L., Pearson, G. T., Larsen, Erik Hviid & Skadhauge, E., 1996, In: Journal of Neuroscience Methods. 65, p. 19-26 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    The influence of stocking rate on helminth transmission in outdoor pigs

    Thomsen, L. E., Mejer, H., Wendt, S., Roepstorff, A. & Hindsbo, O., 1999, Ikke angivet. 17. International Conference of WAAVP, p. g.6.07

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  95. Published

    Fremmede tangarter i Danmark: Hvilke, hvornår og hvor udbredte?

    Thomsen, M., Krause-Jensen, D., Wernberg, T., Stæhr, P. A. & Risgaard-Petersen, N., 2005, In: URT. 29, p. 110-115

    Research output: Contribution to journal › Journal article › Research

  96. Published

    Spatio-temporal distribution patterns of the invasive macroalga Sargassum muticum within a Danish Sargassum-bed

    Thomsen, M. S., Wernberg, T., Stæhr, P. A. & Pedersen, M. F., 2006, In: Helgoland Marine Research. 60, 1, p. 50-58

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Introducerede dyr og planter i Danmark

    Thomsen, M. S., Stæhr, P. A., Wernberg, T., Krause-Jensen, D., Josefson, A. B. & Tendall, O. S., 2008, In: Naturens Verden. 6, p. 10-18

    Research output: Contribution to journal › Journal article › Research

  98. Published

    Alien macroalgae in Denmark - a broad-scale national perspective

    Thomsen, M. S., Wernberg, T., Stæhr, P. A., Krause-Jensen, D., Risgaard-Petersen, N. & Silliman, B. R., 2007, In: Marine Biology Research. 3, 2, p. 61-72

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Gracilaria vermiculophylla (Ohmi) Papenfuss, 1967 (Rhodophyta, Gracilariaceae) in northern Europe, with emphasis on Danish conditions, and what to expect in the future

    Thomsen, M. S., Stæhr, P. A., Nyberg, C. D., Schwærter, S., Krause-Jensen, D. & Silliman, B. R., 2007, In: Aquatic Invasions. 2, 2, p. 83-94

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Annual changes in abundance of non-indigenous marine benthos on a very large spatial scale

    Thomsen, M. S., Wernberg, T., Stæhr, P. A., Silliman, B. R., Josefson, A. B., Krause-Jensen, D. & Risgaard-Petersen, N., 2008, In: Aquatic Invasions. 3, 2, p. 133-140

    Research output: Contribution to journal › Journal article › Research › peer-review

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