- 2022
- Published
Beta2-agonist increases skeletal muscle interleukin 6 production and release in response to resistance exercise in men
Hostrup, Morten, Knudsen, Jakob Grunnet, Maag Kristensen, C., Jessen, Søren Kaare, Pilegaard, Henriette & Bangsbo, Jens, 2022, In: Scandinavian Journal of Medicine & Science in Sports. 32, 7, p. 1099-1108 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bidirectional Exchange of Biogenic Volatile Organic Compounds in Subarctic Heath Mesocosms During Autumn Climate Scenarios
Baggesen, N. S., Davie-Martin, Cleo Lisa, Seco, Roger, Holst, T. & Rinnan, Riikka, 2022, In: Journal of Geophysical Research: Biogeosciences. 127, 6, 20 p., e2021JG006688.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bidirectional protein–protein interactions control liquid–liquid phase separation of PSD-95 and its interaction partners
Christensen, N. R., Pedersen, Christian Parsbæk, Sereikaité, Vita, Pedersen, J. N., Vistrup-Parry, M., Sørensen, Andreas Toft, Otzen, D., Teilum, Kaare, Madsen, Kenneth Lindegaard & Strømgaard, Kristian, 2022, In: iScience. 25, 2, 26 p., 103808.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biochar application differentially affects soil micro-, meso-macro-fauna and plant productivity within a nature restoration grassland
Jeffery, S., van de Voorde, T. F. J., Harris, W. E., Mommer, L., Van Groenigen, J. W., De Deyn, G. B., Ekelund, Flemming, Briones, M. J. I. & Bezemer, T. M., 2022, In: Soil Biology and Biochemistry. 174, 11 p., 108789.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biodiversity patterns of Arctic diatom assemblages in lakes and streams: Current reference conditions and historical context for biomonitoring
Kahlert, M., Rühland, K. M., Lavoie, I., Keck, F., Saulnier-Talbot, E., Bogan, D., Brua, R. B., Campeau, S., Christoffersen, Kirsten Seestern, Culp, J. M., Karjalainen, S. M., Lento, J., Schneider, S. C., Shaftel, R. & Smol, J. P., 2022, In: Freshwater Biology. 67, 1, p. 116-140 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biofilm cultivation facilitates coexistence and adaptive evolution in an industrial bacterial community
Henriksen, N. N. S. E., Hansen, Mads Frederik, Kiesewalter, Heiko T., Russel, J., Nesme, Joseph, Foster, K. R., Svensson, B., Øregaard, G., Herschend, J. & Burmølle, Mette, 2022, In: npj Biofilms and Microbiomes. 8, 8 p., 59.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bioinformatics of transcription factor binding prediction
Navarro-Delgado, E. I., Salgado-Albarrán, M., Torres-Arciga, K., Alcaraz, N., Soto-Reyes, E., Herrera, L. A. & González-Barrios, R., 2022, Bioinformatics and Human Genomics Research. CRC Press, p. 203-221 19 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Biophysical properties at patch scale shape the metabolism of biofilm landscapes
Depetris, A., Tagliavini, G., Peter, H., Kühl, Michael, Holzner, M. & Battin, T. J., 2022, In: npj Biofilms and Microbiomes. 8, 12 p., 5.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biosolids for safe land application: does wastewater treatment plant size matters when considering antibiotics, pollutants, microbiome, mobile genetic elements and associated resistance genes?
Wolters, B., Hauschild, K., Blau, K., Mulder, I., Heyde, B. J., Sørensen, Søren Johannes, Siemens, J., Jechalke, S., Smalla, K. & Nesme, Joseph, 2022, In: Environmental Microbiology. 24, 3, p. 1573-1589 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biosynthesis of Guanitoxin Enables Global Environmental Detection in Freshwater Cyanobacteria
Lima, S. T., Fallon, T. R., Cordoza, J. L., Chekan, J. R., Delbaje, E., Hopiavuori, A. R., Alvarenga, Danillo Oliveira, Wood, S. M., Luhavaya, H., Baumgartner, J. T., Dörr, F. A., Etchegaray, A., Pinto, E., McKinnie, S. M. K., Fiore, M. F. & Moore, B. S., 2022, In: Journal of the American Chemical Society. 144, 21, p. 9372-9379Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biotic and abiotic controls of nitrogen fixation in cyanobacteria-moss associations
Rousk, Kathrin, 2022, In: New Phytologist. 235, 4, p. 1330-1335 6 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Bland James Finlay (March 16, 1952-December 24, 2021)
Fenchel, Tom, 2022, In: Protist. 173, 5, 4 p., 125906.Research output: Contribution to journal › Comment/debate › Research
- Published
Bryophyte species differ widely in their growth and N2-fixation responses to temperature
Rzepczynska, A. M., Michelsen, Anders, Olsen, M. A. N. & Lett, Signe, 2022, In: Arctic Science. 8, 4, 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CO2 i Skandinaviens vandløb analyseret med maskinlæring
Martinsen, Kenneth Thorø & Sand-Jensen, Kaj, 2022, In: Vand & Jord. 5, p. 207-210Research output: Contribution to journal › Journal article › Communication
- Published
CRISPR-Cas systems are widespread accessory elements across bacterial and archaeal plasmids
Pinilla Redondo, Rafael, Russel, J., Mayo-Muñoz, D., Shah, S. A., Garrett, Roger Antony, Nesme, Joseph, Madsen, Jonas Stenløkke, Fineran, P. C. & Sørensen, Søren Johannes, 2022, In: Nucleic Acids Research. 50, 8, p. 4315-4328Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR-Cas12a targeting of ssDNA plays no detectable role in immunity
Marino, N. D., Pinilla Redondo, Rafael & Bondy-Denomy, J., 2022, In: Nucleic acids symposium series. 50, 11, p. 6414-6422 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CRISPR/Cas9 gRNA activity depends on free energy changes and on the target PAM context
Corsi, G. I., Qu, Kunli, Alkan, F., Pan, Xiaoguang, Luo, Y. & Gorodkin, Jan, 2022, In: Nature Communications. 13, 14 p., 3006.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CReSIL: accurate identification of extrachromosomal circular DNA from long-read sequences
Wanchai, V., Jenjaroenpun, P., Leangapichart, T., Arrey Tané, Gerard, Burnham, C. M., Tümmler, M. C., Delgado-Calle, J., Regenberg, Birgitte & Nookaew, I., 2022, In: Briefings in Bioinformatics. 23, 6, 11 p., bbac422.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Calibrated uncertainty for molecular property prediction using ensembles of message passing neural networks
Busk, J., Jørgensen, P. B., Bhowmik, A., Schmidt, M. N., Winther, Ole & Vegge, T., 2022, In: Machine Learning: Science and Technology. 3, 1, 12 p., 015012.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Can bryophyte groups increase functional resolution in tundra ecosystems?
Lett, S., Jónsdóttir, I. S., Becker-Scarpitta, A., Christiansen, C. T., During, H., Ekelund, F., Henry, G. H. R., Lang, S. I., Michelsen, A., Rousk, K., Alatalo, J. M., Betway, K. R., Rui, S. B., Callaghan, T., Carbognani, M., Cooper, E. J., Cornelissen, J. H. C., Dorrepaal, E., Egelkraut, D., Elumeeva, T. G. & 20 others, , 2022, In: Arctic Science. 8, 3, 29 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Can multi-species biofilms defeat antimicrobial surfaces on medical devices?
Ramstedt, M. & Burmølle, Mette, 2022, In: Current Opinion in Biomedical Engineering. 22, 8 p., 100370.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Canalized gene expression during development mediates caste differentiation in ants
Qiu, Bitao, Dai, X., Li, P., Larsen, Rasmus Stenbak, Li, Ruyan, Price, A. L., Ding, G., Texada, Michael James, Zhang, X., Zuo, D., Gao, Q., Jiang, W., Wen, T., Pontieri, L., Guo, C., Rewitz, Kim, Li, Q., Liu, W., Boomsma, Jacobus J. & KU, thw266, 2022, In: Nature Ecology and Evolution. 6, 11, p. 1753-1765Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Candidemia among Hospitalized Pediatric Patients Caused by Several Clonal Lineages of Candida parapsilosis
Hare, R. K., Arastehfar, A., Rosendahl, Søren, Charsizadeh, A., Daneshnia, F., Eshaghi, H., Mirhendi, H., Boekhout, T., Hagen, F. & Arendrup, Maiken Cavling, 2022, In: Journal of Fungi. 8, 2, 11 p., 183.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cardiovascular Autonomic Neuropathy in Type 1 Diabetes Is Associated With Disturbances in TCA, Lipid, and Glucose Metabolism
Hansen, C. S., Suvitaival, T., Theilade, Karen Simone, Mattila, I., Lajer, M., Trošt, K., Ahonen, L., Hansen, T. W., Legido-Quigley, C., Rossing, Peter & Ahluwalia, Tarun Veer Singh, 2022, In: Frontiers in Endocrinology. 13, 831793.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Casein and red meat proteins differentially affect the composition of the gut microbiota in weaning rats
Zhao, Fan, Wang, Chong, Song, S., Fang, C., Zhou, G., Li, C. & Kristiansen, Karsten, 2022, In: Food Chemistry. 397, 11 p., 133769.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cell fine structure and phylogeny of Parvodinium: towards an ultrastructural characterization of the Peridiniopsidaceae (Dinophyceae)
Pandeirada, M. S., Craveiro, S. C., Daugbjerg, Niels, Moestrup, Øjvind & Calado, A. J., 2022, In: European Journal of Phycology. 58, 2, 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cell size matters: Nano- and micro-plastics preferentially drive declines of large marine phytoplankton due to co-aggregation
Dedman, C. J., Christie-Oleza, J. A., Fernandez Juarez, Victor & Echeveste, P., 2022, In: Journal of Hazardous Materials. 424, Part B, 13 p., 127488.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cell transcriptomic atlas of the non-human primate Macaca fascicularis
Han, L., Wei, X., Liu, C., Volpe, G., Zhuang, Z., Zou, X., Wang, Z., Pan, T., Yuan, Y., Zhang, X., Fan, P., Guo, P., Lai, Y., Lei, Y., Liu, X., Yu, F., Shangguan, S., Lai, G., Deng, Q., Liu, Y. & 57 others, , 2022, In: Nature. 604, p. 723-731Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Changes in the foliar fungal community between oak leaf flushes along a latitudinal gradient in Europe
Gaytán, Á., Abdelfattah, A., Faticov, M., Moreira, X., Castagneyrol, B., Van Halder, I., De Frenne, P., Meeussen, C., Timmermans, B. G. H., Ten Hoopen, J. P. J. G., Rasmussen, P. U., Bos, N., Jaatinen, R., Pulkkinen, P., Söderlund, S., Gotthard, K., Pawlowski, K. & Tack, A. J. M., 2022, In: Journal of Biogeography. 49, 12, 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of Divalent Cation Interactions with AASTY Nanodiscs
Timcenko, Milena, Autzen, A. A. A. & Autzen, Henriette Elisabeth, 2022, In: ACS Applied Polymer Materials. 4, 2, p. 1071-1083Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of erenumab and rimegepant on calcitonin gene-related peptide induced responses in Xenopus Laevis oocytes expressing the calcitonin gene-related peptide receptor and the amylin-1 receptor
La Cour, S. H., Juhler, K., Kogelman, L. J. A., Olesen, Jes, Klærke, Dan Arne, Kristensen, D. M. & Jansen-Olesen, I., 2022, In: Journal of Headache and Pain. 23, 12 p., 59.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chemotaxis may assist marine heterotrophic bacterial diazotrophs to find microzones suitable for N2 fixation in the pelagic ocean
Hallstrøm, S., Raina, J., Ostrowski, M., Parks, D. H., Tyson, G. W., Hugenholtz, P., Stocker, R., Seymour, J. R. & Riemann, Lasse, 2022, In: ISME Journal. 16, 11, p. 2525-2534 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data
Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromatin modifier HUSH co-operates with RNA decay factor NEXT to restrict transposable element expression
Garland, W., Müller, I., Wu, M., Schmid, M., Imamura, K., Rib, Leonor, Sandelin, Albin Gustav, Helin, K. & Jensen, T. H., 2022, In: Molecular Cell. 82, 9, p. 1691-1707.e8Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome evolution and the genetic basis of agronomically important traits in greater yam
Bredeson, J. V., Lyons, J. B., Oniyinde, I. O., Okereke, N. R., Kolade, O., Nnabue, I., Nwadili, C. O., Hřibová, E., Parker, M., Nwogha, J., Shu, S., Carlson, J., Kariba, R., Muthemba, S., Knop, K., Barton, G. J., Sherwood, A. V., Lopez-Montes, A., Asiedu, R., Jamnadass, R. & 13 others, , 2022, In: Nature Communications. 13, 16 p., 2001.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets
Han, L., Lan, T., Li, D., Li, H., Deng, L., Peng, Z., He, S., Zhou, Y., Han, R., Li, L., Lu, Y., Lu, H., Wang, Q., Yang, S., Zhu, Y., Huang, Y., Cheng, X., Yu, J., Wang, Y., Sun, H. & 8 others, , 2022, In: Molecular Ecology Resources. 22, 2, p. 768-785 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale haplotype-resolved pangenomics
Garg, S., Balboa, Renzo Fidel Ferdinando & Kuja, J., 2022, In: Trends in Genetics. 38, 11, p. 1103-1107 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ciliary flows in corals ventilate target areas of high photosynthetic oxygen production
Pacherres, Cesar, Ahmerkamp, S., Koren, K., Richter, C. & Holtappels, M., 2022, In: Current Biology. 32, 19, p. 4150-4158.e3 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circle-Seq reveals genomic and disease-specific hallmarks in urinary cell-free extrachromosomal circular DNAs
Lv, W., Pan, X., Han, P., Wang, Z., Feng, W., Xing, X., Wang, Q., Qu, K., Zeng, Y., Zhang, C., Xu, Z., Li, Y., Zheng, T., Lin, L., Liu, C., Liu, X., Li, H., Henriksen, R. A., Bolund, L., Lin, L. & 7 others, , 2022, In: Clinical and Translational Medicine. 12, 4, 16 p., e817.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circular DNA in the human germline and its association with recombination
Henriksen, Rasmus Henrik Amund, Jenjaroenpun, P., Sjøstrøm, I. B., Jensen, Kristian HR, Prada Luengo, Inigo, Wongsurawat, T., Nookaew, I. & Regenberg, Birgitte, 2022, In: Molecular Cell. 82, 1, p. 209-217.e7Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circumpolar patterns of Arctic freshwater fish biodiversity: A baseline for monitoring
Laske, S. M., Amundsen, P., Christoffersen, Kirsten Seestern, Erkinaro, J., Guðbergsson, G., Hayden, B., Heino, J., Holmgren, K., Kahilainen, K. K., Lento, J., Orell, P., Östergren, J., Power, M., Rafikov, R., Romakkaniemi, A., Svenning, M., Swanson, H., Whitman, M. & Zimmerman, C. E., 2022, In: Freshwater Biology. 67, 1, p. 176-193 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Classification of pig calls produced from birth to slaughter according to their emotional valence and context of production
Briefer, Elodie, Sypherd, C. C., Linhart, P., Leliveld, L. M. C., de la Torre, M. P., Read, E. R., Guérin, C., Deiss, V., Monestier, C., Rasmussen, J. H., Špinka, M., Düpjan, S., Boissy, A., Janczak, A. M., Hillmann, E. & Tallet, C., 2022, In: Scientific Reports. 12, 10 p., 3409.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clinical application of high-throughput sequencing technology in prenatal screening and diagnosis of birth defects
ZENG, F., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 118 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Co-evolution of drug resistance and broadened substrate recognition in HIV protease variants isolated from an Escherichia coli genetic selection system
Koivisto, J. M., Poulsen, N. R., Larsen, B. S., Weibull, M. G. M., Stein, Amelie, Doro, F., Winther, Jakob R., Lindorff-Larsen, Kresten & Willemoës, Martin, 2022, In: The Biochemical journal. 479, 4, p. 479-501Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combined berberine and probiotic treatment as an effective regimen for improving postprandial hyperlipidemia in type 2 diabetes patients: a double blinded placebo controlled randomized study
Wang, S., Ren, H., Zhong, H., Zhao, X., Li, C., Ma, J., Gu, X., Xue, Y., Huang, S., Yang, J., Chen, L., Chen, G., Qu, S., Liang, J., Qin, L., Huang, Q., Peng, Y., Li, Q., Wang, X., Zou, Y. & 10 others, , 2022, In: Gut Microbes. 14, 1, 18 p., 2003176.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combining reverse osmosis and microbial degradation for remediation of drinking water contaminated with recalcitrant pesticide residue
Schostag, M. D., Gobbi, Alex, Fini, M. N., Ellegaard-Jensen, L., Aamand, J., Hansen, Lars Hestbjerg, Muff, J. & Albers, C. N., 2022, In: Water Research. 216, 12 p., 118352.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Analyses of 3,654 Plastid Genomes Unravel Insights Into Evolutionary Dynamics and Phylogenetic Discordance of Green Plants
Yang, T., Sahu, S. K., Yang, L., Liu, Y., Mu, W., Liu, X., Strube, M. L., Liu, Huan & Zhong, B., 2022, In: Frontiers in Plant Science. 13, 13 p., 808156.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Genomic and Metabolomic Analysis of Termitomyces Species Provides Insights into the Terpenome of the Fungal Cultivar and the Characteristic Odor of the Fungus Garden of Macrotermes natalensis Termites
Kreuzenbeck, N. B., Seibel, E., Schwitalla, J. W., Fricke, J., Conlon, B. H., Schmidt, Suzanne, Hammerbacher, A., Köllner, T. G., Poulsen, Michael, Hoffmeister, D., Beemelmanns, C. & Pupo, M. T. (ed.), 2022, In: mSystems. 7, 1, 16 p., e01214-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative phylogeography study reveals introgression and incomplete lineage sorting during rapid diversification of Rhodiola
You, J., Lougheed, S. C., Zhao, Y., KU, thw266, Liu, W., Lu, F., Wang, Y., Zhang, W., Yang, J., Qiong, L. & Song, Z., 2022, In: Annals of Botany. 129, 2, p. 185-200 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative proteomics and secretomics revealed virulence, and coresistance-related factors in non O1/O139 Vibrio cholerae recovered from 16 species of consumable aquatic animals
Shan, X., Fu, J., Li, X., Peng, Xu & Chen, L., 2022, In: Journal of Proteomics. 251, 15 p., 104408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational identification of signals predictive for nuclear RNA exosome degradation pathway targeting
Wu, M., Schmid, M., Jensen, T. H. & Sandelin, Albin Gustav, 2022, In: NAR Genomics and Bioinformatics. 4, 3, 18 p., lqac071.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conflicts between large carnivores and local pastoralists around Niokolo Koba National Park, Senegal
Gueye, M., Van Cauteren, D., Mengual, L., Pellaton, R., Leirs, H., Bertola, Laura & de Iongh, H., 2022, In: European Journal of Wildlife Research. 68, 1, 11 p., 9.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational ensembles of intrinsically disordered proteins and flexible multidomain proteins
Thomasen, Emil & Lindorff-Larsen, Kresten, 2022, In: Biochemical Society Transactions. 50, 1, p. 541-554 14 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Conformational heterogeneity of UCAAUC RNA oligonucleotide from molecular dynamics simulations, SAXS, and NMR experiments
Bergonzo, C., Grishaev, A. & Bottaro, S., 2022, In: RNA. 28, 7, p. 937-946 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Confusion will be my epitaph: Genome-scale discordance stifles phylogenetic resolution of Holothuroidea
Koch, N. M., Tilic, E., Miller, A. K., Stiller, Josefin & Rouse, G. W., 2022, bioRxiv, 42 p.Research output: Working paper › Preprint › Research
- Published
Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird
Cavill, Emily Louisa, Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conserved conformational dynamics determine enzyme activity
Torgeson, K. R., Clarkson, M. W., Granata, D., Lindorff-Larsen, Kresten, Page, R. & Peti, W., 2022, In: Science Advances. 8, 31, 10 p., eabo5546.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conserved degronome features governing quality control associated proteolysis
Mashahreh, B., Armony, S., Johansson, Kristoffer Enøe, Chappleboim, A., Friedman, N., Gardner, R. G., Hartmann-Petersen, Rasmus, Lindorff-Larsen, Kresten & Ravid, T., 2022, In: Nature Communications. 13, 1, 13 p., 7588.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conserved signalling components coordinate epidermal patterning and cuticle deposition in barley
Liu, L., Jose, S. B., Campoli, C., Bayer, M. M., Sánchez-Diaz, M. A., McAllister, T., Zhou, Y., Eskan, M., Milne, L., Schreiber, M., Batstone, T., Bull, I. D., Ramsay, L., von Wettstein, Penny, Waugh, R., Hetherington, A. M. & McKim, S. M., 2022, In: Nature Communications. 13, 18 p., 6050.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Context dependency of nucleotide probabilities and variants in human DNA
Liang, Yuhu, Grønbæk, Christian, Fariselli, P. & Krogh, Anders, 2022, In: BMC Genomics. 23, 1, 15 p., 87.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Context dependent prediction in DNA sequence using neural networks
Grønbæk, Christian, Liang, Yuhu, Elliott, Desmond & Krogh, Anders, 2022, In: PeerJ. 10, 22 p., e13666.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contrasting Roles of DOP as a Source of Phosphorus and Energy for Marine Diazotrophs: [Correction]
Filella, A., Riemann, Lasse, Van Wambeke, F., Pulido-Villena, E., Vogts, A., Bonnet, S., Grosso, O., Diaz, J. M., Duhamel, S. & Benavides, M., 2022, In: Frontiers in Marine Science. 9, 10 p., 923765.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contrasting phenology responses to climate warming across the northern extra-tropics
Geng, X., Zhang, Y., Fu, Y. H., Hao, F., Janssens, I. A., Peñuelas, J., Piao, S., Tang, Jing, Wu, Z., Zhang, J., Zhang, X. & Stenseth, N. C., 2022, In: Fundamental Research. 2, 5, p. 708-715 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contrastive learning enables rapid mapping to multimodal single-cell atlas of multimillion scale
YANG, Meng, Yang, Y., Xie, C., Ni, M., Liu, J., Yang, H., Mu, F. & Wang, J., 2022, In: Nature Machine Intelligence. 4, 8, p. 696-709 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Convergent genomic signals of tail length reduction in multiple macaque lineages
DENG, Y., 2022, Section for Ecology and Evolution, Department of Biology, University of Copenhagen. 164 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Could Experimental Inflammation Provide Better Understanding of Migraines?
Reducha, Philip Victor, Edvinsson, L. & Haanes, Kristian Agmund, 2022, In: Cells. 11, 15, 17 p., 2444.Research output: Contribution to journal › Review › Research › peer-review
- Published
Coupling plant litter quantity to a novel metric for litter quality explains C storage changes in a thawing permafrost peatland
Hough, M., Mccabe, S., Vining, S. R., Pickering Pedersen, E., Wilson, R. M., Lawrence, R., Chang, KY., Bohrer, G., Riley, W. J., Crill, P. M., Varner, R. K., Blazewicz, S. J., Dorrepaal, E., Tfaily, M. M., Saleska, S. R., Rich, V. I., Frolking, S., Hodgkins, S. B., Mccalley, C. K., Cooper, W. T. & 6 others, , 2022, In: Global Change Biology. 28, 3, p. 950-968Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Critical Assessment of Metagenome Interpretation: the second round of challenges
Meyer, F., Fritz, A., Deng, Z. L., Koslicki, D., Lesker, T. R., Gurevich, A., Robertson, G., Alser, M., Antipov, D., Beghini, F., Bertrand, D., Brito, J. J., Brown, C. T., Buchmann, J., Buluç, A., Chen, B., Chikhi, R., Clausen, P. T. L. C., Cristian, A., Dabrowski, P. W. & 83 others, , 2022, In: Nature Methods. 19, 4, p. 429-440Research output: Contribution to journal › Journal article › Research › peer-review
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Cross-species discrimination of vocal expression of emotional valence by Equidae and Suidae
Maigrot, A., Hillmann, E. & Briefer, Elodie, 2022, In: BMC Biology. 20, 14 p., 106.Research output: Contribution to journal › Journal article › Research › peer-review
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Cryo-EM structure of the human NKCC1 transporter reveals mechanisms of ion coupling and specificity
Neumann, C., Rosenbæk, L. L., Flygaard, R. K., Habeck, M., Karlsen, J. L., Wang, Yong, Lindorff-Larsen, Kresten, Gad, H. H., Hartmann, R., Lyons, J. A., Fenton, R. A. & Nissen, P., 2022, In: EMBO Journal. 41, 23, 15 p., e110169.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Current challenges in understanding the role of enhancers in disease
Zaugg, J. B., Sahlén, P., Andersson, Robin, Alberich-Jorda, M., de Laat, W., Deplancke, B., Ferrer, J., Mandrup, S., Natoli, G., Plewczynski, D., Rada-Iglesias, A. & Spicuglia, S., 2022, In: Nature Structural and Molecular Biology. 29, 12, p. 1148-1158 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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DNA Motifs and an Accessory CRISPR Factor Determine Cas1 Binding and Integration Activity in Sulfolobus islandicus
Liu, T., Xu, Y., Wang, X., Ye, Q., Liu, Z., Zhang, Z., Liu, J., Yang, Y., Peng, Xu & Peng, N., 2022, In: International Journal of Molecular Sciences . 23, 17, 15 p., 10178.Research output: Contribution to journal › Journal article › Research › peer-review
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Danmarks Biodiversitet: før, nu og I morgen
Sand-Jensen, Kaj & Schou, J. C., 2022, 1 ed. København: Gad. 240 p.Research output: Book/Report › Book › Communication
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De Novo Assembly of 20 Chicken Genomes Reveals the Undetectable Phenomenon for Thousands of Core Genes on Microchromosomes and Subtelomeric Regions
Li, M., Sun, C., Xu, N., Bian, P., Tian, X., Wang, X., Wang, Y., Jia, X., Heller, R., Wang, M., Wang, F., Dai, X., Luo, R., Guo, Y., Wang, X., Yang, P., Hu, D., Liu, Z., Fu, W., Zhang, S. & 10 others, , 2022, In: Molecular Biology and Evolution. 39, 4, 16 p., msac066.Research output: Contribution to journal › Journal article › Research › peer-review
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De novo transcriptome sequencing of the northern fowl mite, Ornithonyssus sylviarum, shed light on parasitiform poultry mites evolution and its chemoreceptor repertoires
Bhowmick, B., Chen, H., Lozano-Fernandez, J., Vizueta Moraga, Joel, Ignell, R. & Han, Q., 2022, In: Parasitology Research. 121, 2, p. 521-535 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Deciphering bacteria associated with a pre-parasitic stage of the root-knot nematode Meloidogyne hapla in nemato-suppressive and nemato-conducive soils
Topalović, O., Santos, S. S., Heuer, H., Nesme, Joseph, Kanfra, X., Hallmann, J., Sørensen, Søren Johannes & Vestergård, M., 2022, In: Applied Soil Ecology. 172, 9 p., 104344.Research output: Contribution to journal › Journal article › Research › peer-review
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Deciphering horizontal transfer of plasmids and β-lactamase protection in microbial communities
Olesen, Asmus Kalckar, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 180 p.Research output: Book/Report › Ph.D. thesis › Research
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Deciphering the Alphabet of Disorder-Glu and Asp Act Differently on Local but Not Global Properties
Roesgaard, M. A., Lundsgaard, J. E., Newcombe, Estella Anne, Jacobsen, Nina Louise, Pesce, Francesco, Tranchant, E. E., Lindemose, Søren, Prestel, Andreas, Hartmann-Petersen, Rasmus, Lindorff-Larsen, Kresten & Kragelund, Birthe Brandt, 2022, In: Biomolecules. 12, 10, 19 p., 1426.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DeepLoc 2.0: multi-label subcellular localization prediction using protein language models
Thumuluri, V., Almagro Armenteros, J. J., Johansen, A. R., Nielsen, H. & Winther, Ole, 2022, In: Nucleic Acids Research. 50, W1, p. W228-W234Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deoxygenation lowers the thermal threshold of coral bleaching: [Inkl. Correction]
Alderdice, R., Perna, G., Cárdenas, A., Hume, B. C. C., Wolf, M., Kühl, Michael, Pernice, M., Suggett, D. J. & Voolstra, C. R., 2022, In: Scientific Reports. 12, 14 p., 18273.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Development and Optimization of a Silica Column-Based Extraction Protocol for Ancient DNA
Dehasque, M., Chrzanová Pecnerová, Patrícia, Kempe Lagerholm, V., Ersmark, E., Danilov, G. K., Mortensen, P., Vartanyan, S. & Dalén, L., 2022, In: Genes. 13, 4, 16 p., 687.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diet and food selection by fish larvae in turbid and clear water shallow temperate lakes
Trochine, C., Risholt, C., Schou, M. O., Lauridsen, T. L., Jacobsen, L., Skov, C., Søndergaard, M., Berg, S., Christoffersen, Kirsten Seestern & Jeppesen, E., 2022, In: Science of the Total Environment. 804, 12 p., 150050.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dietary Selenomethionine Reduce Mercury Tissue Levels and Modulate Methylmercury Induced Proteomic and Transcriptomic Alterations in Hippocampi of Adolescent BALB/c Mice
Mellingen, R. M., Myrmel, L. S., Rasinger, J. D., Lie, K. K., Bernhard, A., Madsen, L. & Nostbakken, O. J., 2022, In: International Journal of Molecular Sciences. 23, 20, 19 p., 12242.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differential expression of the three independent CaM genes coding for an identical protein: Potential relevance of distinct mRNA stability by different codon usage
Munk, M., Villalobo, E., Villalobo, A. & Berchtold, Martin Werner, 2022, In: Cell Calcium. 107, 20 p., 102656.Research output: Contribution to journal › Review › Research › peer-review
- Published
Differential expression profiling of heat stressed tardigrades reveals major shift in the transcriptome
Neves, R. C., Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 267, 7 p., 111169.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Direct and indirect effects of warming on moss abundance and associated nitrogen fixation in subarctic ecosystems
Permin, Aya Tora Foged, Michelsen, Anders & Rousk, Kathrin, 2022, In: Plant and Soil. 471, 1-2, p. 343-358 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disease-linked mutations cause exposure of a protein quality control degron
Kampmeyer, Caroline, Larsen-Ledet, Sven, Wagnkilde, M. R., Michelsen, M., Iversen, Henriette Kring Mangor, Nielsen, S. V., Lindemose, Søren, Caregnato, A., Ravid, T., Stein, Amelie, Teilum, Kaare, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2022, In: Structure. 30, 9, p. 1245-1253.e5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disentangling compartment functions in sessile marine invertebrates
Hughes, D. J., Raina, J., Nielsen, D. A., Suggett, D. J. & Kühl, Michael, 2022, In: Trends in Ecology & Evolution. 37, 9, p. 740-748 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disparate Inventories of Hypoxia Gene Sets Across Corals Align With Inferred Environmental Resilience
Alderdice, R., Hume, B. C. C., Kühl, Michael, Pernice, M., Suggett, D. J. & Voolstra, C. R., 2022, In: Frontiers in Marine Science. 9, 14 p., 834332.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dissection of Functional Domains of Orc1-2, the Archaeal Global DNA Damage-Responsive Regulator
Liu, X., Sun, M., Xu, R., Shen, Y., Huang, Q., Feng, X. & She, Q., 2022, In: International Journal of Molecular Sciences. 23, 23, 16 p., 14609.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distance decay 2.0 – A global synthesis of taxonomic and functional turnover in ecological communities
Graco-Roza, C., Aarnio, S., Abrego, N., Acosta, A. T. R., Alahuhta, J., Altman, J., Angiolini, C., Aroviita, J., Attorre, F., Baastrup-Spohr, L., Barrera-Alba, J. J., Belmaker, J., Biurrun, I., Bonari, G., Bruelheide, H., Burrascano, S., Carboni, M., Cardoso, P., Carvalho, J. C., Castaldelli, G. & 72 others, , 2022, In: Global Ecology and Biogeography. 31, 7, p. 1399-1421 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distinct Functional Metagenomic Markers Predict the Responsiveness to Anti-PD-1 Therapy in Chinese Non-Small Cell Lung Cancer Patients
Fang, C., Fang, W., Xu, L., Gao, F., Hou, Y., Zou, H., Ma, Y., Moll, J. M., Yang, Y., Wang, D., Huang, Y., Ren, H., Zhao, H., Qin, S., Zhong, H., Li, J., Liu, S., Yang, H., Wang, J., Brix, S. & 2 others, , 2022, In: Frontiers in Oncology. 12, 13 p., 837525.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distribution of protoporphyrin IX in erythrocytes in a case of acquired erythropoietic protoporphyria
Heerfordt, I. M., Fontenete, S., Lerche, Catharina Margrethe & Wulf, H. C., 2022, In: Photodiagnosis and Photodynamic Therapy. 37, 3 p., 102629.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diverse Aquatic Animal Matrices Play a Key Role in Survival and Potential Virulence of Non-O1/O139 Vibrio cholerae Isolates
Yan, L., Jin, Y., Zhang, B., Xu, Y., Peng, Xu, Qin, S. & Chen, L., 2022, In: Frontiers in Microbiology. 13, 21 p., 896767.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Does childhood exposure to biodiverse greenspace reduce the risk of developing asthma?
Winnicki, M. H., Dunn, R. R., Winther-Jensen, M., Jess, T., Allin, K. H. & Bruun, Hans Henrik, 2022, In: Science of the Total Environment. 850, 11 p., 157853.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Domains and Major Transitions of Social Evolution
Boomsma, Jacobus J., 2022, Oxford University Press. 296 p.Research output: Book/Report › Book › Research › peer-review
- Published
Donor-dependent fecal microbiota transplantation efficacy against necrotizing enterocolitis in preterm pigs
Hui, Y., Vestergaard, G., Deng, Ling, Kot, Witold, Thymann, Thomas, Brunse, Anders & Nielsen, Dennis Sandris, 2022, In: npj Biofilms and Microbiomes. 8, 1, 12 p., 48.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Double Mutant of Chymotrypsin Inhibitor 2 Stabilized through Increased Conformational Entropy
Gavrilov, Y., Kümmerer, Felix, Orioli, S., Prestel, Andreas, Lindorff-Larsen, Kresten & Teilum, Kaare, 2022, In: Biochemistry. 61, 3, p. 160-170 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Draft genome assemblies of four manakins
Li, X., Gao, R., Chen, G., Price, A. L., Øksnebjerg, Daniel Bilyeli, Hosner, Peter Andrew, Zhou, Y., KU, thw266 & Feng, S., 2022, In: Scientific Data. 9, 11 p., 564.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dual action of the cannabinoid receptor 1 ligand arachidonyl-2′-chloroethylamide on calcitonin gene-related peptide release
Christiansen, I. M., Edvinsson, J. C. A., Reducha, Philip Victor, Edvinsson, L. & Haanes, Kristian Agmund, 2022, In: Journal of Headache and Pain. 23, 11 p., 30.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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Complexity of avian evolution revealed by family-level genomes
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A region of suppressed recombination misleads neoavian phylogenomics
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Næste niveau for dansk life science er verdenstoppen – vi har fagligheden til at være der: Danske forskere, talenter og virksomheder har både bredden og niveauet til at gøre København til det næste Kendall Square. Biologisk Institut står på spring i startklodserne.
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