Department of Biology

 

 
  1. Published

    The genome of the fire ant Solenopsis invicta

    Wurm, Y., Wang, J., Riba-Grognuz, O., Corona, M., Nygaard, S., Hunt, B. G., Ingram, K. K., Falquet, L., Nipitwattanaphon, M., Gotzek, D., Dijkstra, M. B., Oettler, J., Comtesse, F., Shih, C-J., Wu, W-J., Yang, C-C., Thomas, J., Beaudoing, E., Pradervand, S., Flegel, V. & 18 others, Cook, E. D., Fabbretti, R., Stockinger, H., Long, L., Farmerie, W. G., Oakey, J., Boomsma, Jacobus J., Pamilo, P., Yi, S. V., Heinze, J., Goodisman, M. A. D., Farinelli, L., Harshman, K., Hulo, N., Cerutti, L., Xenarios, I., Shoemaker, D. & Keller, L., 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 14, p. 5679-84 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    The genome of the largest bony fish, ocean sunfish (Mola mola), provides insights into its fast growth rate

    Pan, H., Yu, H., Ravi, V., Li, C., Lee, A. P., Lian, M. M., Tay, B., Brenner, S., Wang, J., Yang, H., KU, thw266 & Venkatesh, B., 2016, In: GigaScience. 5, 12 p., 36.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming

    Nygaard, S., Zhang, G., Schiøtt, M., Li, C., Wurm, Y., Hu, H., Zhou, J., Ji, L., Qiu, F., Rasmussen, M., Pan, H., Hauser, Frank, Krogh, Anders, Grimmelikhuijzen, Cornelis (Cok), Wang, J. & Boomsma, Jacobus J., 2011, In: Genome Research. 21, 8, p. 1339-1348 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    The genome of the mesopolyploid crop species Brassica rapa

    Wang, X., Wang, H., Wang, J., Sun, R., Wu, J., Liu, S., Bai, Y., Mun, J-H., Bancroft, I., Cheng, F., Huang, S., Li, X., Hua, W., Wang, J., Wang, X., Freeling, M., Pires, J. C., Paterson, A., Chalhoub, B., Wang, B. & 79 others, Hayward, A., Sharpe, A., Park, B., Weisshaar, B., Liu, B., Li, B., Liu, B., Tong, C., Song, C., Duran, C., Peng, C., Geng, C., Koh, C., Lin, C., Edwards, D., Mu, D., Shen, D., Soumpourou, E., Li, F., Fraser, F., Conant, G., Lassalle, G., King, G., Bonnema, G., Tang, H., Wang, H., Belcram, H., Zhou, H., Hirakawa, H., Abe, H., Guo, H., Wang, H., Jin, H., Parkin, I., Batley, J., Kim, J., Just, J., Li, J., Xu, J., Deng, J., Kim, J. H., Li, J., Yu, J., Meng, J., Wang, J., Min, J., Poulain, J., Hatakeyama, K., Wu, K., Wang, L., Fang, L., Trick, M., Links, M., Zhao, M., Jin, M., Ramchiary, N., Drou, N., Berkman, P., Cai, Q., Huang, Q., Li, R., Tabata, S., Cheng, S., Zhang, S., Zhang, S., Huang, S., Sato, S., Sun, S., Kwon, S., Choi, S., Lee, T., Fan, W., Zhao, X., Tan, X., Xu, X., Wang, Y., Qiu, Y., Yin, Y. & Li, Y., 2011, In: Nature Genetics. 43, 10, p. 1035-1039 5 p.

    Research output: Contribution to journalLetterResearchpeer-review

  5. Published

    The genome of the model beetle and pest Tribolium castaneum.

    Richards, S., Principal investigators, Gibbs, R. A., Weinstock, G. M., White paper, Brown, S. J., Denell, R., Beeman, R. W., Gibbs, R., Analysis leaders, Beeman, R. W., Brown, S. J., Bucher, G., Friedrich, M., Grimmelikhuijzen, C. J. P., Klingler, M., Lorenzen, M., Richards, S., Roth, S., Schröder, R. & 56 others, Tautz, D., Zdobnov, E. M., DNA sequence and global analysis: DNA sequencing, D. S. A. G. A. D. S., Muzny, D., Gibbs, R. A., Weinstock, G. M., Attaway, T., Bell, S., Buhay, C. J., Chandrabose, M. N., Chavez, D., Clerk-Blankenburg, K. P., Cree, A., Dao, M., Davis, C., Chacko, J., Dinh, H., Dugan-Rocha, S., Fowler, G., Garner, T. T., Garnes, J., Gnirke, A., Hawes, A., Hernandez, J., Hines, S., Holder, M., Hume, J., Jhangiani, S. N., Joshi, V., Khan, Z. M., EST sequencing, E. S., genome assembly, G. A., G+C content, G. C., repetitive DNA, transposons and telomeres, R. D. T. A. T., gene prediction and consensus gene set, G. P. A. C. G. S., global gene content analysis, G. G. C. A., Developmental processes and signalling pathways, D. P. A. S. P., Pest biology, senses, Medea and RNAi: ligand gated ion channels, P. B. S. M. A. R. L. G. I. C., oxidative phosphorylation, O. P., P450 genes, P. G., chitin and cuticular proteins, C. A. C. P., digestive proteinases, D. P., immunity, I., neurohormones and GPCRs, N. A. G., Grimmelikhuijzen, Cornelis (Cok), Hauser, Frank, Cazzamali, G., Williamson, M., Tribolium Genome Sequencing Consortium, T. G. S. C., Project leader, P. L., neuropeptide processing enzymes, N. P. E., opsins, O., odorant receptors and gustatory receptors, O. R. A. G. R., odorant binding and chemosensory proteins, O. B. A. C. P., Medea, M. & systemic RNAi, S. R., 2008, In: Nature. 452, 7190, p. 949-955 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    The genome of the pear (Pyrus bretschneideri Rehd.)

    Wu, J., Wang, Z., Shi, Z., Zhang, S., Ming, R., Zhu, S., Khan, M. A., Tao, S., Korban, S. S., Wang, H., Chen, N. J., Nishio, T., Xu, X., Cong, L., Qi, K., Huang, X., Wang, Y., Zhao, X., Wu, J., Deng, C. & 40 others, Gou, C., Zhou, W., Yin, H., Qin, G., Sha, Y., Tao, Y., Chen, H., Yang, Y., Song, Y., Zhan, D., Wang, J., Li, L., Dai, M., Gu, C., Wang, Y., Shi, D., Wang, X., Zhang, H., Zeng, L., Zheng, D., Wang, C., Chen, M., Wang, G., Xie, L., Sovero, V., Sha, S., Huang, W., Zhang, S., Zhang, M., Sun, J., Xu, L., Li, Y., Liu, X., Li, Q., Shen, J., Wang, J., Paull, R., Bennetzen, J., Wang, J. & Zhang, S., 2013, In: Genome Research. 23, 2, p. 396-408 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    The genome of the simian and human malaria parasite Plasmodium knowlesi

    Pain, A., Böhme, U., Berry, A. E., Mungall, K., Finn, R. D., Jackson, A. P., Mourier, T., Mistry, J., Pasini, E. M., Aslett, M. A., Balasubrammaniam, S., Borgwardt, K., Brooks, K., Carret, C., Carver, T. J., Cherevach, I., Chillingworth, T., Clark, T. G., Galinski, M. R., Hall, N. & 34 others, Harper, D., Harris, D., Hauser, H., Ivens, A., Janssen, C. S., Keane, T., Larke, N., Lapp, S., Marti, M., Moule, S., Meyer, I. M., Ormond, D., Peters, N., Sanders, M., Sanders, S., Sargeant, T. J., Simmonds, M., Smith, F., Squares, R., Thurston, S., Tivey, A. R., Walker, D., White, B., Zuiderwijk, E., Churcher, C., Quail, M. A., Cowman, A. F., Turner, C. M. R., Rajandream, M. A., Kocken, C. H. M., Thomas, A. W., Newbold, C. I., Barrell, B. G. & Berriman, M., 2008, In: Nature. 455, 7214, p. 799-803 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    The genome of the social amoeba Dictyostelium discoideum.

    Eichinger, L., Pachebat, J. A., Glöckner, G., Rajandream, M-A., Sucgang, R., Berriman, M., Song, J., Olsen, R., Szafranski, K., Xu, Q., Tunggal, B., Kummerfeld, S., Madera, M., Konfortov, B. A., Rivero, F., Bankier, A. T., Lehmann, R., Hamlin, N., Davies, R., Gaudet, P. & 77 others, Fey, P., Pilcher, K., Chen, G., Saunders, D., Sodergren, E., Davis, P., Kerhornou, A., Nie, X., Hall, N., Anjard, C., Hemphill, L., Bason, N., Farbrother, P., Desany, B., Just, E., Morio, T., Rost, R., Churcher, C., Cooper, J., Haydock, S., van Driessche, N., Cronin, A., Goodhead, I., Muzny, D., Mourier, T., Pain, A., Lu, M., Harper, D., Lindsay, R., Hauser, H., James, K., Quiles, M., Madan Babu, M., Saito, T., Buchrieser, C., Wardroper, A., Felder, M., Thangavelu, M., Johnson, D., Knights, A., Loulseged, H., Mungall, K., Oliver, K., Price, C., Quail, M. A., Urushihara, H., Hernandez, J., Rabbinowitsch, E., Steffen, D., Sanders, M., Ma, J., Kohara, Y., Sharp, S., Simmonds, M., Spiegler, S., Tivey, A., Sugano, S., White, B., Walker, D., Woodward, J., Winckler, T., Tanaka, Y., Shaulsky, G., Schleicher, M., Weinstock, G., Rosenthal, A., Cox, E. C., Chisholm, R. L., Gibbs, R., Loomis, W. F., Platzer, M., Kay, R. R., Williams, J., Dear, P. H., Noegel, A. A., Barrell, B. & Kuspa, A., 2005, In: Nature. 435, 7038, p. 43-57 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    The genome sequence of the lactic acid bacterium, Carnobacterium maltaromaticum ATCC 35586 encodes potential virulence factors

    Leisner, Jørgen, Hansen, M. A., Larsen, M. H., Hansen, L., Ingmer, Hanne & Sørensen, Søren Johannes, 2012, In: International Journal of Food Microbiology. 152, 3, p. 107-115 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    The genomes of two key bumblebee species with primitive eusocial organization

    Sadd, B. M., Barribeau, S. M., Bloch, G., de Graaf, D. C., Dearden, P., Elsik, C. G., Gadau, J., Grimmelikhuijzen, C., Hasselmann, M., Lozier, J. D., Robertson, H. M., Smagghe, G., Stolle, E., Van Vaerenbergh, M., Waterhouse, R. M., Bornberg-Bauer, E., Klasberg, S., Bennett, A. K., Câmara, F., Guigó, R. & 124 others, Hoff, K., Mariotti, M., Munoz-Torres, M., Murphy, T., Santesmasses, D., Amdam, G. V., Beckers, M., Beye, M., Biewer, M., Bitondi, M. M., Blaxter, M. L., Bourke, A. F., Brown, M. J., Buechel, S. D., Cameron, R., Cappelle, K., Carolan, J. C., Christiaens, O., Ciborowski, K. L., Clarke, D. F., Colgan, T. J., Collins, D. H., Cridge, A. G., Dalmay, T., Dreier, S., du Plessis, L., Duncan, E., Erler, S., Evans, J., Falcon, T., Flores, K., Freitas, F. C., Fuchikawa, T., Gempe, T., Hartfelder, K., Hauser, Frank, Helbing, S., Humann, F. C., Irvine, F., Jermiin, L. S., Johnson, C. E., Johnson, R. M., Jones, A. K., Kadowaki, T., Kidner, J. H., Koch, V., Köhler, A., Kraus, F. B., Lattorff, H. M. G., Leask, M., Lockett, G. A., Mallon, E. B., Antonio, D. S. M., Marxer, M., Meeus, I., Moritz, R. F., Nair, A., Näpflin, K., Nissen, I., Niu, J., Nunes, F. M., Oakeshott, J. G., Osborne, A., Otte, M., Pinheiro, D. G., Rossié, N., Rueppell, O., Santos, C. G., Schmid-Hempel, R., Schmitt, B. D., Schulte, C., Simões, Z. L., Soares, M. P., Swevers, L., Winnebeck, E. C., Wolschin, F., Yu, N., Zdobnov, E. M., Aqrawi, P. K., Blankenburg, K. P., Coyle, M., Francisco, L., Hernandez, A. G., Holder, M., Hudson, M. E., Jackson, L., Jayaseelan, J., Joshi, V., Kovar, C., Lee, S. L., Mata, R., Mathew, T., Newsham, I. F., Ngo, R., Okwuonu, G., Pham, C., Pu, L., Saada, N., Santibanez, J., Simmons, D., Thornton, R., Venkat, A., Walden, K. K., Wu, Y., Debyser, G., Devreese, B., Asher, C., Blommaert, J., Chipman, A. D., Chittka, L., Fouks, B., Liu, J., O'Neill, M. P., Sumner, S., Puiu, D., Qu, J., Salzberg, S. L., Scherer, S. E., Muzny, D. M., Richards, S., Robinson, G. E., Gibbs, R. A., Schmid-Hempel, P. & Worley, K. C., 2015, In: Genome Biology (Online Edition). 16, 31 p., 76.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    The genomic and phenotypic diversity of Schizosaccharomyces pombe

    Jeffares, D. C., Rallis, C., Rieux, A., Speed, D., Převorovský, M., Mourier, T., Marsellach, F. X., Iqbal, Z., Lau, W., Cheng, T. M. K., Pracana, R., Mülleder, M., Lawson, J. L. D., Chessel, A., Bala, S., Hellenthal, G., O'Fallon, B., Keane, T., Simpson, J. T., Bischof, L. & 22 others, Tomiczek, B., Bitton, D. A., Sideri, T., Codlin, S., Hellberg, J. E. E. U., van Trigt, L., Jeffery, L., Li, J., Atkinson, S., Thodberg, Malte, Febrer, M., McLay, K., Drou, N., Brown, W., Hayles, J., Salas, R. E. C., Ralser, M., Maniatis, N., Balding, D. J., Balloux, F., Durbin, R. & Bähler, J., 2015, In: Nature Genetics. 47, 3, p. 235-241 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    The genomic basis of the plant island syndrome in Darwin’s giant daisies

    Cerca, J., Petersen, B., Lazaro-Guevara, J. M., Rivera-Colón, A., Birkeland, S., Vizueta, J., Li, S., Li, Q., Loureiro, J., Kosawang, C., Díaz, P. J., Rivas-Torres, G., Fernández-Mazuecos, M., Vargas, P., McCauley, R. A., Petersen, G., Santos-Bay, L., Wales, N., Catchen, J. M., Machado, D. & 9 others, Nowak, M. D., Suh, A., Sinha, N. R., Nielsen, Lene Rostgaard, Seberg, Ole, Gilbert, M Thomas P, Leebens-Mack, J. H., Rieseberg, L. H. & Martin, M. D., 2022, In: Nature Communications. 13, 13 p., 3729.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    The genomic impact of 100 million years of social evolution in seven ant species

    Gadau, J., Helmkampf, M., Nygaard, S., Roux, J., Simola, D. F., Smith, C. R., Suen, G., Wurm, Y. & Smith, C. D., 2012, In: Trends in Genetics. 28, 1, p. 14-21 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    The genomic landscape of reference genomes of cultivated human gut bacteria

    Lin, X., Hu, T., Chen, J., Liang, H., Zhou, J., Wu, Z., Ye, C., Jin, X., Xu, X., Zhang, W., Jing, X., Yang, T., Wang, J., Yang, H., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: Nature Communications. 14, 1, 11 p., 1663.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    The genomic sequence of the chinese hamster ovary (CHO)-K1 cell line

    Xu, X., Nagarajan, H., Lewis, N. E., Pan, S., Cai, Z., Liu, X., Chen, W., Xie, M., Wang, W., Hammond, S., Andersen, M. R., Neff, N., Passarelli, B., Koh, W., Fan, H. C., Wang, J., Gui, Y., Lee, K. H., Betenbaugh, M., Quake, S. R. & 3 others, Famili, I., Palsson, B. O. & Wang, J., 2011, In: Nature Biotechnology. 29, 8, p. 735-741 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    The genus Corymborkis Thou. (Orchidaceae) a taxonomic revision

    Rasmussen, Finn N., 1977, In: Botanisk Tidsskrift. 71, p. 161-192 32 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    The genus Gymnospermium (Berberidaceae) in the Balkans

    Tan, K., Shuka, L., Siljak-Yakovlev, S., Malo, S. & Pustahija, F., 2011, In: Phytotaxa. 25, p. 1-17 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    The genus Nemania s.l. (Xylariaceae) in Norway

    Granmo, A., Læssøe, Thomas & Schumacher, T., 1999, In: Sommerfeltia. 27, p. 1-96

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    The genus Pyrenomyxa and its affinities to other cleistocarpous Hypoxyloideae as inferred from morphological and chemical traits

    Stadler, M., Læssøe, Thomas & Vassilyeva, L., 2005, In: Mycologia. 97, 5, p. 1129-1139

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    The genus Elaphomyces (Ascomycota, Eurotiales): a ribosomal DNA-based phylogeny and revised systematics of European 'deer truffles'

    Paz, A., Bellanger, J. -., Lavoise, C., Molia, A., Ławrynowicz, M., Larsson, E., Ibarguren, I. O., Jeppson, M., Læssøe, Thomas, Sauve, M., Richard, F. & Moreau, P. -., Jun 2017, In: Persoonia. 38, p. 197-239 43 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    The genus Gymnospermium (Berberidaceae) in Italy: identity and relationships of the populations at the western limit of the genus range

    Rosati, L., Coppi, A., Farris, E., Fascetti, S., Becca, G., Peregrym, M., Tan, K. & Selvi, F., 2019, In: Plant Biosystems. 153, 6, p. 796-808

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    The genus Chaetoceros (Bacillariophyceae) in inner Danish coastal waters

    Jensen, K. G. & Moestrup, Øjvind, 1998, In: Opera Botanica. 133, p. 1-68

    Research output: Contribution to journalJournal articleResearch

  23. Published

    The genus Draba L.

    Tan, K. & Steranovic, V., 2002, Flora Hellenica Volume 2. Tyskland: Koeltz Scientific Books, Koenigstein, p. 237-242

    Research output: Chapter in Book/Report/Conference proceedingReport chapterResearch

  24. Published

    The genus Dryas on Svalbard: morphological and genetic evidence for a single species, Dryas octopetala

    Siegismund, Hans Redlef & Philipp, M., 1999, In: Det Norske Videnskaps-Akademi I. Mat.-Naturv. Klasse Skrifter. Ny Serie no.. 38, p. 269-279

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    The genus Karlodinium : morphology, ultrastructure, species concept, and phylogeny.

    Bergholtz, T., Daugbjerg, Niels & Moestrup, Øjvind, 2004. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch