- 2021
- Published
Carbon cycling in freshwater ecosystems — from pond to stream network
Martinsen, K. T., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 120 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Cardiovascular autonomic neuropathy and the impact on progression of diabetic kidney disease in type 1 diabetes
Bjerre-Christensen, T., Winther, S. A., Tofte, N., Theilade, S., Ahluwalia, Tarun Veer Singh, Lajer, M., Hansen, T. W., Rossing, Peter & Hansen, C. S., 2021, In: B M J Open Diabetes Research & Care. 9, 1, 9 p., e002289.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Caste-specific recognition patterns in a fungus-growing termite
Bos, N. & van Zweden, J. S., 2021, In: Animal Behaviour. 182, p. 125-133 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Catalogue of lichens (and some related fungi) of Navarino Island, Cape Horn Biosphere Reserve, Chile
Etayo, J., Sancho, L. G., Gómez-Bolea, A., Søchting, Ulrik, Aguirre, F. & Rozzi, R., 2021, In: Anales del Instituto de la Patagonia. 49, p. 1-110Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Century-long records reveal shifting challenges to seagrass recovery
Krause-Jensen, D., Duarte, C. M., Sand-Jensen, Kaj & Carstensen, J., 2021, In: Global Change Biology. 27, 3, p. 563-575 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cervicovaginal microbiome dynamics after taking oral probiotics
Chen, Chen, Hao, L., Zhang, Z., Tian, L., Zhang, X., Zhu, J., Jie, Zhuye, Tong, X., Xiao, L., Zhang, T., Jin, X., Xu, X., Yang, H., Wang, J., Kristiansen, Karsten & Jia, H., 2021, In: Journal of Genetics and Genomics. 48, 8, p. 716-726 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization and description of Faecalibacterium butyricigenerans sp. nov. and F. longum sp. nov., isolated from human faeces
Zou, Y., Lin, X., Xue, W., Tuo, L., Chen, M., Chen, X., Sun, C., Li, F., Liu, S., Dai, Y., Kristiansen, Karsten & Xiao, L., 2021, In: Scientific Reports. 11, 13 p., 11340.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of an archaeal virus replication initiator protein and first insights into virus assembly of spindle-shaped virus SMV1
Zhang, W., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 140 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Characterization of genomic clones by targeted deep sequencing of ctDNA to monitor liver cancer
Sun, Y., Kong, X., Yu, J., Zheng, X., Lin, M., Cheng, Z., Wang, H., An, N., Xie, Y., Zeng, S., Xue, S., Xia, M., Wei, X., Song, L., Liu, F., Fan, C., Fang, Z., Gao, L., Yang, Y., Zhu, S. & 1 others, , 2021, In: Translational Cancer Research. 10, 10, p. 4387-4402 24 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patients
Zhong, H., Wang, Y., Shi, Z., Zhang, L., Ren, H., He, W., Zhang, Z., Zhu, A., Zhao, J., Xiao, F., Yang, F., Liang, T., Ye, F., Zhong, B., Ruan, S., Gan, M., Zhu, J., Li, F., Li, F., Wang, D. & 13 others, , 2021, In: Cell Discovery. 7, 14 p., 23.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of the human skin resistome and identification of two microbiota cutotypes
Li, Z., Xia, J., Jiang, L., Tan, Y., An, Y., Zhu, X., Ruan, J., Chen, Z., Zhen, H., Ma, Y., Jie, Z., Xiao, L., Yang, H., Wang, J., Kristiansen, K., Xu, X., Jin, L., Nie, C., Krutmann, J., Liu, X. & 1 others, , 2021, In: Microbiome. 9, 18 p., 47.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterizing Conformational Changes of ASIC1a During Gating and Peptide Modulation
Heusser, Stephanie, Sheikh, Zeshan Pervez, Borg, C. B., Galleano, I. & Pless, Stephan, 2021, p. 337A-337A.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Charge Engineering Reveals the Roles of Ionizable Side Chains in Electrospray Ionization Mass Spectrometry
Abramsson, M. L., Sahin, C., Hopper, J. T. S., Branca, R. M. M., Danielsson, J., Xu, M., Chandler, S. A., Österlund, N., Ilag, L. L., Leppert, A., Costeira-Paulo, J., Lang, L., Teilum, K., Laganowsky, A., Benesch, J. L. P., Oliveberg, M., Robinson, C. V., Marklund, E. G., Allison, T. M., Winther, J. R. & 1 others, , 2021, In: JACS Au. 1, 12, p. 2385-2393 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Charge Interactions in a Highly Charge-Depleted Protein
Hervø-Hansen, S., Højgaard, C., Johansson, Kristoffer Enøe, Wang, Y., Wahni, K., Young, D., Messens, J., Teilum, Kaare, Lindorff-Larsen, Kresten & Winther, Jakob R., 2021, In: Journal of the American Chemical Society. 143, 6, p. 2500-2508 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chlorophyll-a concentrations in 82 large alpine lakes on the Tibetan Plateau during 2003–2017: temporal–spatial variations and influencing factors
Pi, X., Feng, L., Li, W., Liu, J., Kuang, X., Shi, K., Qi, W., Chen, D. & Tang, Jing, 2021, In: International Journal of Digital Earth. 14, 6, p. 714-735 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale genomes provide new insights into subspecies divergence and evolutionary characteristics of the giant panda
Guang, X., Lan, T., Wan, Q. H., Huang, Y., Li, H., Zhang, M., Li, R., Zhang, Z., Lei, Y., Zhang, L., Zhang, H., Li, D., Li, X., Li, H., Xu, Y., Qiao, M., Wu, D., Tang, K., Zhao, P., Lin, J-Q. & 11 others, , 2021, In: Science Bulletin. 66, 19, p. 2002-2013 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circulating Free Fatty Acid and Phospholipid Signature Predicts Early Rapid Kidney Function Decline in Patients With Type 1 Diabetes
Afshinnia, F., Rajendiran, T. M., He, C., Byun, J., Montemayor, D., Darshi, M., Tumova, J., Kim, J., Limonte, C. P., Miller, R. G., Costacou, T., Orchard, T. J., Ahluwalia, Tarun Veer Singh, Rossing, Peter, Snell-Bergeon, J. K., de Boer, I. H., Natarajan, L., Michailidis, G., Sharma, K. & Pennathur, S., 2021, In: Diabetes Care. 44, 9, p. 2098-2106 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Co-occurrence of contaminants in marine fish from the North East Atlantic Ocean: Implications for human risk assessment
Ho, Q. T., Bank, M. S., Azad, A. M., Nilsen, B. M., Frantzen, S., Boitsov, S., Maage, A., Kögel, T., Sanden, M., Frøyland, L., Hannisdal, R., Hove, H., Lundebye, A. K., Nøstbakken, O. J. & Madsen, L., 2021, In: Environment International. 157, 13 p., 106858.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Co-option of immune effectors by the hormonal signalling system triggering metamorphosis in Drosophila melanogaster
Nunes, C., Koyama, Takashi & Sucena, É., 2021, In: PLOS Genetics. 17, 11, 24 p., e1009916.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Co-selection of antibiotic resistance genes, and mobile genetic elements in the presence of heavy metals in poultry farm environments
Mazhar, S. H., Li, Xuan Ji, Rashid, A., Su, J., Xu, J., Brejnrod, A. D., Su, J., Wu, Y., Zhu, Y., Zhou, S. G., Feng, R. & Rensing, C., 2021, In: Science of the Total Environment. 755, Part 2, 10 p., 142702.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combining Bayesian age models and genetics to investigate population dynamics and extinction of the last mammoths in northern Siberia
Dehasque, M., Chrzanová Pecnerová, Patrícia, Muller, H., Tikhonov, A., Nikolskiy, P., Tsigankova, V. I., Danilov, G. K., Díez-del-Molino, D., Vartanyan, S., Dalén, L. & Lister, A. M., 2021, In: Quaternary Science Reviews. 259, 10 p., 106913.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Commercially available kelp and seaweed products – valuable iodine source or risk of excess intake?
Aakre, I., Solli, D. D., Markhus, M. W., Mæhre, H. K., Dahl, L., Henjum, S., Alexander, J., Korneliussen, P., Madsen, L. & Kjellevold, M., 2021, In: Food & Nutrition Research. 65, 17 p., 7584.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Community-wide changes reflecting bacterial interspecific interactions in multispecies biofilms
Sadiq, F. A., Burmølle, Mette, Heyndrickx, M., Flint, S., Lu, W., Chen, W., Zhao, J. & Zhang, H., 2021, In: Critical Reviews in Microbiology. 47, 3, p. 338-358 21 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Comparative Genomic Analyses of Flavobacterium psychrophilum Isolates Reveals New Putative Genetic Determinants of Virulence Traits
Castillo, D., Donati, V. L., Jørgensen, J., Sundell, K., Dalsgaard, I., Madsen, L., Wiklund, T. & Middelboe, Mathias, 2021, In: Microorganisms. 9, 8, 15 p., 1658.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Genomic and Metabolic Analysis of Streptomyces sp. RB110 Morphotypes Illuminates Genomic Rearrangements and Formation of a New 46-Membered Antimicrobial Macrolide
Um, S., Guo, H., Thiengmag, S., Benndorf, R., Murphy, Rob, Rischer, M., Braga, D., Poulsen, Michael, de Beer, Z. W., Lackner, G. & Beemelmanns, C., 2021, In: ACS chemical biology. 16, 8, p. 1482-1492Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Genomics Analysis of Keratin-Degrading Chryseobacterium Species Reveals Their Keratinolytic Potential for Secondary Metabolite Production
Kang, D., Shoaie, S., Jacquiod, S., Sørensen, Søren Johannes & Ledesma-Amaro, R., 2021, In: Microorganisms. 9, 5, 15 p., 1042.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Genomics of Novel Agrobacterium G3 Strains Isolated From the International Space Station and Description of Agrobacterium tomkonis sp. nov.
Singh, N. K., Lavire, C., Nesme, Joseph, Vial, L., Nesme, X., Mason, C. E., Lassalle, F. & Venkateswaran, K., 2021, In: Frontiers in Microbiology. 12, 15 p., 765943.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative analysis of the alveolar microbiome in COPD, ECOPD, Sarcoidosis, and ILD patients to identify respiratory illnesses specific microbial signatures
Gupta, S., Shariff, M., Chaturvedi, G., Sharma, A., Goel, N., Yadav, M., Mortensen, M. S., Sørensen, Søren Johannes, Mukerji, M. & Chauhan, N. S., 2021, In: Scientific Reports. 11, 11 p., 3963.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative bioacoustics: a roadmap for quantifying and comparing animal sounds across diverse taxa
Odom, K. J., Araya-Salas, M., Morano, J. L., Ligon, R. A., Leighton, G. M., Taff, C. C., Dalziell, A. H., Billings, A. C., Germain, Ryan Ross, Pardo, M., de Andrade, L. G., Hedwig, D., Keen, S. C., Shiu, Y., Charif, R. A., Webster, M. S. & Rice, A. N., 2021, In: Biological Reviews. 96, 4, p. 1135-1159 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative transcriptome analysis reveals key epigenetic targets in SARS-CoV-2 infection
Salgado-Albarrán, M., Navarro-Delgado, E. I., Del Moral-Morales, A., Alcaraz, N., Baumbach, J., González-Barrios, R. & Soto-Reyes, E., 2021, In: n p j Systems Biology and Applications. 7, 14 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparison of Delivery Methods in Phage Therapy against Flavobacterium columnare Infections in Rainbow Trout
Kunttu, H. M. T., Runtuvuori-Salmela, A., Middelboe, Mathias, Clark, J. & Sundberg, L. R., 2021, In: Antibiotics. 10, 8, 19 p., 914.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Competition-based screening helps to secure the evolutionary stability of a defensive microbiome
Worsley, S. F., Innocent, T. M., Holmes, N. A., Al-Bassam, M. M., Schiøtt, M., Wilkinson, B., Murrell, J. C., Boomsma, Jacobus J., Yu, D. W. & Hutchings, M. I., 2021, In: BMC Biology. 19, 20 p., 205.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comprehensive analysis of genetic and clinical characteristics of 30 patients with X-linked juvenile retinoschisis in China
Gao, F., Dong, J., Wang, D., Chen, F., Hu, F., Chang, Q., Xu, P., Liu, W., Li, J., Huang, Y., Wu, J. & Xu, G., 2021, In: Acta Ophthalmologica. 99, 4, p. e470-e479 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational and Experimental Assessment of Backbone Templates for Computational Redesign of the Thioredoxin Fold
Marin, Frederikke Isa, Johansson, Kristoffer Enøe, O'Shea, Charlotte, Lindorff-Larsen, Kresten & Winther, Jakob R., 2021, In: The Journal of Physical Chemistry B. 125, 40, p. 11141-11149Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Computational methods for chromosome-scale haplotype reconstruction
Garg, S., 2021, In: Genome Biology. 22, 24 p., 101.Research output: Contribution to journal › Review › Research › peer-review
- Published
Conformational Ensembles of Noncoding Elements in the SARS-CoV-2 Genome from Molecular Dynamics Simulations
Bottaro, S., Bussi, G. & Lindorff-Larsen, Kresten, 2021, In: Journal of the American Chemical Society. 143, 22, p. 8333-8343Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Connecting the αα-hubs: same fold, disordered ligands, new functions
Staby, L., Bugge, K., Falbe-Hansen, R. G., Salladini, Edoardo, Skriver, Karen & Kragelund, Birthe Brandt, 2021, In: Cell Communication and Signaling. 19, 5 p., 2.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Conservation of Long-tailed Macaques: Implications of the Updated IUCN Status and the CoVID-19 Pandemic
Hansen, Malene Friis, Gill, M., Nawangsari, V. A., Sanchez, K. L., Cheyne, S. M., Nijman, V. & Fuentes, A., 2021, In: Primate Conservation. 35, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conservative route to genome compaction in a miniature annelid
Martín-Durán, J. M., Vellutini, B. C., Marlétaz, F., Cetrangolo, V., Cvetesic, N., Thiel, D., Henriet, S., Grau-Bové, X., Carrillo-Baltodano, A. M., Gu, W., Kerbl, A., Marquez, Y., Bekkouche, N., Chourrout, D., Gómez-Skarmeta, J. L., Irimia, M., Lenhard, B., Worsaae, Katrine & Hejnol, A., 2021, In: Nature Ecology and Evolution. 5, 2, p. 231-242Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contingency and determinism in the evolution of bird song sound frequency
Friis, J. I., Dabelsteen, Torben & Cardoso, G. C., 2021, In: Scientific Reports. 11, 9 p., 11600.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contrasting responses of major and minor volatile compounds to warming and gall-infestation in the Arctic willow Salix myrsinites
Swanson, L., Li, Tao & Rinnan, Riikka, 2021, In: Science of the Total Environment. 793, 10 p., 148516.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contrasting use of space by two migratory Afro-Palearctic warblers on their African non-breeding grounds
Mostafa, D. A. A., Willemoes, M., Salewski, V., Ortvad, T. E., Dabelsteen, Torben & Thorup, Kasper, 2021, In: Journal of Ornithology. 162, 3, p. 813-821 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contributions to OH reactivity from unexplored volatile organic compounds measured by PTR-ToF-MS – a case study in a suburban forest of the Seoul metropolitan area during the Korea–United States Air Quality Study (KORUS-AQ) 2016
Sanchez, D., Seco, Roger, Gu, D., Guenther, A., Mak, J., Lee, Y., Kim, D., Ahn, J., Blake, D., Herndon, S., Jeong, D., Sullivan, J. T., Mcgee, T., Park, R. & Kim, S., 2021, In: Atmospheric Chemistry and Physics. 21, 8, p. 6331-6345 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Correlated transcriptional responses provide insights into the synergy mechanisms of the furazolidone, vancomycin, and sodium deoxycholate triple combination in escherichia coli
Olivera, Catrina Diane Peralta, Cox, M. P., Rowlands, G. J. & Rakonjac, J., 2021, In: mSphere. 6, 5, 14 p., e00627-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cruise Report EUROFLEETS2 ESAW-2 ‘Evolution and spreading of the Southern Adriatic Waters'(ESAW) ESAW-2
Kovacevic, V., Bensi, M., Giani, M., Dellisanti, Walter, Urbini, L., Pacciaroni, M., Muslim, S., Mihanovic, H., Pavlovic, M. & Karthauser, C., 2021, Relazione Interna OGS 2021/50 OCE 21.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication
- Published
Crustacean Fauna of the Aral Sea and its Relation to Ichthyofauna During the Modern Regression Crisis and Efforts at Restoration
Plotnikov, I. S., Aladin, N. V., Mossin, J. & Høeg, Jens Thorvald, 2021, In: Zoological Studies. 60, 24 p., 25.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding
Wang, Kaituo, Dagil, Robert, Lavstsen, Thomas, Misra, S. K., Spliid, C. B., Wang, Y., Gustavsson, Tobias, Sandoval, D. R., Vidal-Calvo, E. E., Choudhary, Swati, Agerbæk, Mette Ørskov, Lindorff-Larsen, Kresten, Nielsen, Morten Agertoug, Theander, Thor Grundtvig, Sharp, J. S., Clausen, Thomas Mandel, Gourdon, Pontus Emanuel & Salanti, Ali, 2021, In: Nature Communications. 12, 1, 10 p., 2956.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DEER-PREdict: Software for efficient calculation of spin-labeling EPR and NMR data from conformational ensembles
Tesei, Giulio, Martins, J. M., Kunze, M. B. A., Wang, Y., Crehuet, R. & Lindorff-Larsen, Kresten, 2021, In: PLOS Computational Biology. 17, 1, 18 p., e1008551.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA Double-Strand Break-Induced Gene Amplification in Yeast
Strucko, T., Lisby, Michael & Mortensen, U. H., 2021, Homologous Recombination: Methods and Protocols. Aguilera, A. & Carreira, A. (eds.). Humana Press, p. 239-252 14 p. (Methods in Molecular Biology, Vol. 2153).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
Most downloads
-
32525
downloads
Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
Research output: Contribution to conference › Conference abstract for conference › Research
Published -
8970
downloads
Long-term survival of dinoflagellate cysts in anoxic marine sediments.
Research output: Contribution to conference › Conference abstract for conference › Research
Published -
7454
downloads
Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research
Published
Latest publications
Complexity of avian evolution revealed by family-level genomes
Research output: Contribution to journal › Journal article › Research › peer-review
A region of suppressed recombination misleads neoavian phylogenomics
Research output: Contribution to journal › Journal article › Research › peer-review
Næste niveau for dansk life science er verdenstoppen – vi har fagligheden til at være der: Danske forskere, talenter og virksomheder har både bredden og niveauet til at gøre København til det næste Kendall Square. Biologisk Institut står på spring i startklodserne.
Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication