Department of Biology

 

 
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  1. Published

    Self- and mutual shading and competition effect on competing algae distributions: Biological implications of the model

    Timm, U., Klinck, J. M. & Okubo, A., 1992, In: Ecol. Modelling. 59, p. 11-36

    Research output: Contribution to journal › Journal article › Research

  2. Published

    Vertical phytoplankton distributions: patterns and analytical solutions

    Timm, U., 1994, In: J.Biol.Syst.. 2 (2), p. 137-163

    Research output: Contribution to journal › Journal article › Research

  3. Published

    Linking Arenicola marina irrigation behavior to oxygen transport and dynamics in sandy sediments

    Timmermann, K., Banta, G. T. & Glud, R. N., 2007, In: Journal of Marine Research. 64, p. 915-938

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Genetic dissection of mammalian ERAD through comparative haploid and CRISPR forward genetic screens

    Timms, R. T., Menzies, S. A., Tchasovnikarova, I. A., Christensen, L. C., Williamson, J. C., Antrobus, R., Dougan, G., Ellgaard, Lars & Lehner, P. J., 2016, In: Nature Communications. 7, 10 p., 11786.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Distribution of protozoa in scots pine mycorrhizospheres

    Timonen, S., Christensen, Søren & Ekelund, Flemming, 2004, In: Soil Biology & Biochemistry. 36, p. 1987-1993

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Purification and characterization of 26S proteasomes from human and mouse spermatozoa

    Tipler, C. P., Hutchon, S. P., Hendil, K. A. B., Tanaka, K., Fishel, S. & Mayer, R. J., 1998, In: Molecular Human Reproduction. Vol. 3 nr. 12, p. 1053-1060

    Research output: Contribution to journal › Journal article › Research

  7. Published

    Effects of temperature on specific dynamic action in Atlantic cod Gadus morhua

    Tirsgård, B., Svendsen, J. C. & Steffensen, John Fleng, 2015, In: Fish Physiology & Biochemistry. 41, 1, p. 41-50 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    The effect of temperature and body size on metabolic scope of activity in juvenile Atlantic cod Gadus morhua L.

    Tirsgård, B., Behrens, J. W. & Steffensen, John Fleng, 2015, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 179, p. 89-94 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The Effects of Temperature, Hypoxia and Hypercapnia on the Metabolism of Atlantic Cod Gadus morhua

    Tirsgård, B., 2013, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  10. Published

    Prolonged SDA and reduced digestive efficiency under elevated CO2 may explain reduced growth in Atlantic cod (Gadus morhua)

    Tirsgård, B., Moran, D. & Steffensen, John Fleng, 2015, In: Aquatic Toxicology. 158, p. 171-180 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    High reproduction, but low biomass: mortality estimates of the copepod Acartia tonsa in a hyper-eutrophic estuary

    Tiselius, P., Borg, C. M. A., Hansen, B. W., Hansen, Per Juel, Nielsen, T. G. & Vismann, Bent, 2008, In: Aquatic Biology. 2, p. 93-103

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Metal concentrations in Danish arable soils

    Tjell, J. C. & Hovmand, Mads Frederik, 1978, In: Acta Agriculturae Scandinavica. 28, 1, p. 81-89 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Impact of roots and rhizomes on wetland archaeology: a review

    Tjelldén, A. K. E., Kristiansen, S. M., Matthiesen, H. & Pedersen, Ole, 2015, In: Conservation and Management of Archaeological Sites. 17, 4, p. 370-391 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Successful treatment of psoriasis with adalimumab induced no changes in the gut microbiota

    Todberg, T., Egeberg, Alexander, Zachariae, Claus, Sørensen, N., Pedersen, Oluf Borbye & Skov, Lone, 2022, In: Journal of the European Academy of Dermatology and Venereology. 36, 6, p. e464-e467 4 p.

    Research output: Contribution to journal › Comment/debate › Research

  15. Published

    The nervous system of the basal mollusk Wirenia argentea (Solenogastres): a study employing immunocytochemical and 3D reconstruction techniques

    Todt, C., Bchinger, T. & Wanninger, A. W. G., 2008, In: Marine Biology Research. 4, 4, p. 290-303

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Of tests, trochs, shells, and spicules: Development of the basal mollusk Wirenia argentea (Solenogastres) and its bearing on the evolution of trochozoan larval key features

    Todt, C. & Wanninger, A., 2010, In: Frontiers in Zoology. 7, 1, p. 6

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The threatened plant intermediate wintergreen (Pyrola media) associates with a wide range of biotrophic fungi in native Scottish pine woods

    Toftegaard, T., Iason, G. R., Alexander, I. J., Rosendahl, Søren & Taylor, A. F. S., 2010, In: Biodiversity and Conservation. 19, 14, p. 3963-3971 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    A haplotype-resolved genome assembly of the Nile rat facilitates exploration of the genetic basis of diabetes

    Toh, H., Yang, C., Formenti, G., Raja, K., Yan, L., Tracey, A., Chow, W., Howe, K., Bergeron, L. A., Zhang, G., Haase, B., Mountcastle, J., Fedrigo, O., Fogg, J., Kirilenko, B., Munegowda, C., Hiller, M., Jain, A., Kihara, D., Rhie, A. & 9 others, Phillippy, A. M., Swanson, S. A., Jiang, P., Clegg, D. O., Jarvis, E. D., Thomson, J. A., Stewart, R., Chaisson, M. J. P. & Bukhman, Y. V., 2022, In: BMC Biology. 20, 21 p., 245.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Quenching of bacteriochlorophyll fluorescence in chlorosomes from Chloroflexus aurantiacus by exogenous quinones

    Tokita, S., Frigaard, Niels-Ulrik, Hirota, M., Shimada, K. & Matsuura, K., 2000, In: Photochemistry and Photobiology. 72, 3, p. 345-350 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Pheophytinization of bacteriochlorophyll c and energy transfer in cells of Chlorobium tepidum

    Tokita, S., Hirota, M., Frigaard, Niels-Ulrik, Shimada, K. & Matsuura, K., 1999, In: Archives of Microbiology. 172, 1, p. 40-44 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Structure of Leptin Receptor Related with Obesity

    Toleikis, Z., 2014, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  22. Published

    Wolbachia Horizontal Transmission Events in Ants: What Do We Know and What Can We Learn?

    Tolley, S. J. A., Nonacs, P. & Sapountzis, P., 2019, In: Frontiers in Microbiology. 10, p. 1-9 296.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Phantom midge-based models for inferring past fish abundances

    Tolonen, K. T., Brodersen, K. P., Kleisborg, T. A., Holmgren, K., Dahlberg, M., Hamerlik, L. & Hämäläinen, H., 2012, In: Journal of Paleolimnology. 47, 4, p. 531-547 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Respiratory levels and adaption in four freshwater species of Gammaarus (Crustacea Amphipoda)

    Toman, M. J. & Dall, P. C., 1998, In: Internat. Rev. Hydrobiol.. 83, p. 251-263

    Research output: Contribution to journal › Journal article › Research

  25. Published

    The diet of Erpobdella octoculata (Herudinea: Erpobdellidae) in two Danish lowland streams

    Toman, M. & Dall, P. C., 1997, In: Polskie Archiwum Hydrobiologii. 140, p. 549-563

    Research output: Contribution to journal › Journal article › Research

  26. Published

    A- or C-chromosomes, does it matter for the transfer of transgenes from Brassica napus

    Tomiuk, J., Hauser, T. P. & Jørgensen, R. B., 2000, In: Theoretical and Applied Genetics. 100, 5, p. 750-754

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    A rapid and non-destructive method to assess leaf injury caused by the cassava green mite, Mononychellus tanajoa (Bondar) (Acarina: Tetranychidae)

    Tomkiewicz, J., Skovgård, H., Nachman, Gøsta Støger & Münster-Swendsen, M., 1993, In: Experimental & Applied Acarology. 17, 1-2, p. 29-40

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Assessment of testis development during induced spermatogenesis in the European eel Anguilla anguilla

    Tomkiewicz, J., Kofoed, T. M. N. & Pedersen, Jes Søe, 3 May 2011, In: Marine and Coastal Fisheries. 3, 1, p. 106-118

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Reconstructing colonization dynamics to establish how human activities transformed island biodiversity

    Tomlinson, S., Lomolino, M. V., Anderson, A., Austin, J. J., Brown, S. C., Haythorne, S., Perry, G. L. W., Wilmshurst, J. M., Wood, J. R. & Fordham, D. A., 2024, In: Scientific Reports. 14, 1, 13 p., 5261.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Use of Probiotics to Control Biofilm Formation in Food Industries

    Tomé, A. R., Carvalho, F. M., Teixeira-Santos, R., Burmølle, Mette, Mergulhão, F. J. M. & Gomes, L. C., 2023, In: Antibiotics. 12, 4, 17 p., 754.

    Research output: Contribution to journal › Review › Research › peer-review

  31. Published

    Responses of key root traits in the genus Oryza to soil flooding mimicked by stagnant, deoxygenated nutrient solution

    Tong, Shuai, Kjær, Johan Emil, Peralta Ogorek, Lucas León, Pellegrini, Elisa, Song, Zhiwei, Pedersen, Ole & Herzog, Max, 2023, In: Journal of Experimental Botany. 74, 6, 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Can the Wild Perennial, Rhizomatous Rice Species Oryza longistaminata be a Candidate for De Novo Domestication?

    Tong, Shuai, Ashikari, M., Nagai, K. & Pedersen, Ole, 2023, In: Rice. 16, 1, 20 p., 13.

    Research output: Contribution to journal › Review › Research › peer-review

  33. Published

    The resilience journey of rice: Root traits, genome editing and silicon-mediated strategies for enhanced abiotic stress tolerance in rice

    Tong, Shuai, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 139 p.

    Research output: Book/Report › Ph.D. thesis › Research

  34. Published

    Assessment of the Representativeness of MODIS Aerosol Optical Depth Products at Different Temporal Scales Using Global AERONET Measurements

    Tong, Y., Feng, L., Sun, K. & Tang, Jing, 2020, In: Remote Sensing. 12, 14, 26 p., 2330.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Lake Cadagno: microbial life in crenogenic meromixis

    Tonolla, M., Storelli, N., Danza, F., Gulati, R. D. (ed.), Ravasi, D., Peduzzi, S., Posth, Nicole Rita Elisabeth, Cox, R. P., Jørgensen, M. F., Gregersen, Lea Haarup, Daugbjerg, Niels & Frigaard, Niels-Ulrik, 2017, Ecology of Meromictic Lakes. Gulati, R. D., Zadereev, E. S. & Degermendzhi, A. G. (eds.). Springer, p. 155-186 32 p. (Ecological Studies, Vol. 228).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  36. Published

    Nematodes as suppressors and facilitators of plant performance

    Topalovic, Olivera & Geisen, S., 2023, In: New Phytologist. 238, 6, p. 2305-2312

    Research output: Contribution to journal › Review › Research › peer-review

  37. Published

    Deciphering bacteria associated with a pre-parasitic stage of the root-knot nematode Meloidogyne hapla in nemato-suppressive and nemato-conducive soils

    Topalović, O., Santos, S. S., Heuer, H., Nesme, Joseph, Kanfra, X., Hallmann, J., Sørensen, Søren Johannes & Vestergård, M., 2022, In: Applied Soil Ecology. 172, 9 p., 104344.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Activity of root-knot nematodes associated with composition of a nematode-attached microbiome and the surrounding soil microbiota

    Topalovic, Olivera, Bak, Frederik, Santos, S., Sikder, M. M., Sapkota, R., Ekelund, Flemming, Nicolaisen, Mette Haubjerg & Vestergård, M., 2023, In: FEMS Microbiology Ecology. 99, 9, 11 p., fiad091.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Investigations on Microbes Attached to the Cuticle of Phytonematodes

    Topalovic, Olivera, Radaković, Z. S., Elhady, A., Bredenbruch, S. & Heuer, H., 2024, Plant-Nematode Interactions. Molinari, S. (ed.). Vol. 2756. p. 257-270 14 p. (Methods in molecular biology (Clifton, N.J.)).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  40. Published

    Editorial: Drivers of host-microbiome interactions in the rhizosphere

    Topalovic, Olivera, Koorem, K. & Wilschut, R. A., 2023, In: Frontiers in Plant Science. 14, 3 p., 1294388.

    Research output: Contribution to journal › Editorial › Research › peer-review

  41. Published

    Amino acid transporter genes are essential for FLO11-dependent and FLO11-independent biofilm formation and invasive growth in Saccharomyces cerevisiae

    Torbensen, R., Møller, H. D., Gresham, D., Alizadeh, S., Ochmann, D., Boles, E. & Regenberg, Birgitte, 2012, In: P L o S One. 7, 7, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Rhizocephalan Barnacles

    Torchin, M. E. & Høeg, Jens Thorvald, 2008, Encyclopedia of Tidepools and Rocky Shores. Denny, M. W. & Gaines, S. D. (eds.). Berkeley, C. A.: University of California Press, p. 465-468 4 p. (Encyclopedias of the natural world, Vol. 1).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  43. Published

    Variants in the 5' region of the neuropeptide Y receptor Y2 gene (NPY2R) are associated with obesity in 5,971 white subjects

    Torekov, Signe Sørensen, Larsen, L. H., Andersen, G., Albrechtsen, Anders, Glümer, C., Borch-Johnsen, K., Jørgensen, Tina, Hansen, Teis Schjals & Pedersen, Oluf Borbye, 2006, In: Diabetologia. 49, 11, p. 2653-8 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Conserved conformational dynamics determine enzyme activity

    Torgeson, K. R., Clarkson, M. W., Granata, D., Lindorff-Larsen, Kresten, Page, R. & Peti, W., 2022, In: Science Advances. 8, 31, 10 p., eabo5546.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    The in vitro blood-brain barrier model under OGD condition

    Tornabene, E., Helms, H. C. C., Berndt, P., Blasig, I., Pedersen, Stine Helene Falsig & Larsen, Birger Brodin, 2 Nov 2015.

    Research output: Contribution to conference › Conference abstract for conference › Communication

  46. Published

    Modeling the ischemic blood-brain barrier; the effects of oxygen-glucose deprivation (OGD) on endothelial cells in culture

    Tornabene, E., Helms, H. C. C., Berndt, P., Blasig, I., Pedersen, Stine Helene Falsig, Waagepetersen, Helle S. & Larsen, Birger Brodin, 19 Jun 2016.

    Research output: Contribution to conference › Conference abstract for conference › Communication

  47. Published

    Changes in barrier properties and protein expression levels of bovine brain endothelial cells during oxygen-glucose deprivation (OGD)

    Tornabene, E., Helms, H. C. C., Berndt, P., Blasig, I., Pedersen, Stine Helene Falsig & Larsen, Birger Brodin, 27 Aug 2015.

    Research output: Contribution to conference › Conference abstract for conference › Communication

  48. Published

    Changes in protein expression levels, Claudin-5 localization and barrier function in bovine brain endothelial cells during oxygen-glucose deprivation (OGD)

    Tornabene, E., Helms, H. C. C., Berndt, P., Blasig, I., Pedersen, Stine Helene Falsig & Larsen, Birger Brodin, 4 Jul 2015.

    Research output: Contribution to conference › Conference abstract for conference › Communication

  49. Published

    Effects of oxygen-glucose deprivation (OGD) on barrier properties and mRNA transcript levels of selected marker proteins in brain endothelial cells/astrocyte co-cultures

    Tornabene, E., Helms, H. C. C., Pedersen, Stine Helene Falsig & Larsen, Birger Brodin, 2019, In: PLoS ONE. 14, 8, 20 p., e0221103.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    A bovine in vitro blood-brain barrier model under oxygenglucose deprivation (OGD) condition

    Tornabene, E., Helms, H. C. C., Berndt, P., Blasig, I., Pedersen, Stine Helene Falsig, Waagepetersen, Helle S. & Larsen, Birger Brodin, 2016.

    Research output: Contribution to conference › Poster › Research

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