Department of Biology

 

 
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  1. Published

    Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D. M. & Fiore, M. F., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 5, 12 p., 004811.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Aminobacter MSH1-mineralisation of BAM in sand-filters depends on biological diversity

    Ekelund, Flemming, Harder, Christoffer Bugge, Knudsen, B. E. & Aamand, J., 2015, In: P L o S One. 10, 6, 14 p., e0128838.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Bacillus halodurans strain C125 encodes and synthesizes enzymes from both known pathways to form dUMP directly from Cytosine Deoxyribonucleotides

    Oehlenschlæger, C. B., Løvgreen, M. N., Reinauer, E., Lehtinen, E., Pind, M. L., Harris, P., Martinussen, J. & Willemoës, Martin, 2015, In: Applied and Environmental Microbiology. 81, 10, p. 3395-3404 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Bacillus thuringiensis toxins divert progenitor cells toward enteroendocrine fate by decreasing cell adhesion with intestinal stem cells in Drosophila

    Jneid, Rouba, Loudhaief, Rihab, Zucchini-Pascal, N., Nawrot-Esposito, M. P., Fichant, A., Rousset, R., Bonis, M., Osman, D. & Gallet, A., 2023, In: eLife. 12, 34 p., e80179.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Bacillus velezensis SQR9 inhibition to fungal denitrification responsible for decreased N2O emissions from acidic soils

    Huang, Mengyuan, Zhang, Y., Wu, J., Wang, Y., Xie, Y., Geng, Y., Zhang, N., Michelsen, Anders, Li, S., Zhang, R., Shen, Q. & Zou, J., 2023, In: Science of the Total Environment. 885, 10 p., 163789.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Baffinella frigidus gen. et sp. nov. (Baffinellaceae fam. nov., Cryptophyceae) from Baffin Bay: morphology, pigment profile, phylogeny and growth rate response to three abiotic factors

    Daugbjerg, Niels, Norlin, A. & Lovejoy, C., Oct 2018, In: Journal of Phycology. 54, 5, p. 665-680 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Baldinia droopii sp. nov. (Suessiales, Dinophyceae), a new species from a small rainwater rock pool near Tvarminne, south-western Finland

    Hansen, Gert, Daugbjerg, Niels & Moestrup, Øjvind, 2023, In: Phycologia. 62, 1, 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Blastocystis in a Gut Microbiota Context and Aspects of Blastocystis Genomics

    Andersen, L. P. O., 2016, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  9. Published

    Butyribacter intestini gen. nov., sp. nov., a butyric acid-producing bacterium of the family Lachnospiraceae isolated from human faeces, and reclassification of Acetivibrio ethanolgignens as Acetanaerobacter ethanolgignens gen. nov., comb. nov

    Zou, Y., Xue, W., Lin, X., Lv, M., Luo, G., Dai, Y., Sun, H., Liu, S., Sun, C., Hu, T. & Xiao, L., 2021, In: Systematic and Applied Microbiology. 44, 3, 8 p., 126201.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    C-locked analogs of the antimicrobial peptide BP214

    Andersen, I. K. L., Thomsen, T. T., Rashid, J., Bobak, T. R., Oddo, A., Franzyk, Henrik, Løbner-Olesen, Anders & Hansen, Paul Robert, 2022, In: Antibiotics. 11, 8, 10 p., 1080.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Callithrix jacchus (the common marmoset)

    Yang, Chentao & KU, thw266, 2021, In: Trends in Genetics. 37, 10, p. 948-949 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  12. Published

    Caloplaca andina comb. nov. (Teloschistaceae, Ascomycota), a species close to the genus Fulgensia

    Scutari, N. C., Rosato, V. G. & Søchting, Ulrik, 2002, In: Mitteilungen aus dem Institut für Allgemeine Botanik, Hamburg. 30-32, p. 213-224

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Caloplaca thuringiaca sp. nov., a species from the Caloplaca holocarpa - complex

    Søchting, Ulrik & Stordeur, R., 2001, In: Lichenologist. 33, p. 467-472

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Camponotus floridanus ants incur a trade-off between phenotypic development and pathogen susceptibility from their mutualistic endosymbiont Blochmannia

    Sinotte, Veronica Marie, Freedman, S. N., Ugelvig, Line Vej & Seid, M. A., 2018, In: Insects. 9, 2, p. 1-14 58.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Catenarina (Teloschistaceae, Ascomycota), a new Southern Hemisphere genus with 7-chlorocatenarin

    Søchting, Ulrik, Søgaard, M. Z., Elix, J. A., Arup, U., Elvebakk, A. & Sancho, L. G., 2014, In: Lichenologist. 46, 2, p. 175-187 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Charcotiana and Amundsenia, two new genera in Teloschistaceae (lichenized Ascomycota, subfamily Xanthorioideae) hosting two new species from continental Antarctica, and Austroplaca frigida, a new name for a continental Antarctic species

    Søchting, Ulrik, Garrido-Benavent, I., Seppelt, R., Castello, M., Perez-Ortega, S., de los Rios Murillo, A., Sancho, L. G., Frödén, P. & Arup, U., 2014, In: Lichenologist. 46, 6, p. 763-782 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Cheilosia fasciata (Diptera: Syrphidae) new to Denmark

    Bruun, Hans Henrik & Bygebjerg, R., 2016, In: Entomologisk Tidskrift. 137, p. 131-135 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Chloranthus genome provides insights into the early diversification of angiosperms

    Guo, X., Fang, D., Sahu, S. K., Yang, S., Guang, X., Folk, R., Smith, S. A., Chanderbali, A. S., Chen, S., Liu, M., Yang, T., Zhang, S., Liu, X., Xu, X., Soltis, P. S., Soltis, D. E. & Liu, Huan, 2021, In: Nature Communications. 12, 14 p., 6930.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Cokhicum cupanii Guss. subsp glossophyllum (Heldr.) Rouy, Datura innoxia Mill. and Eclipta prostrata (L.) L., new floristic records in Montenegro and western Balkan

    Cakovic, D., Stesevic, D., Vuksanovic, S. & Tan, K., 2014, In: Acta Botanica Croatica. 73, 1, p. 255-265 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Cortinarius stjernegaardii and C. kristinae (Basidiomycota, Agaricales), two new European species with a mainly northern distribution

    Frøslev, Tobias Guldberg, Brandrud, T. E. & Dima, B., Feb 2017, In: Mycological Progress. 16, 2, p. 145-153 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Crystallicutis gen. nov. (Irpicaceae, Basidiomycota), including C. damiettensis sp. nov., found on Phoenix dactylifera (date palm) trunks in the Nile Delta of Egypt

    El-Gharabawy, H. M., A. Leal-Dutra, Caio & Griffith, G. W., 2021, In: Fungal Biology. 125, 6, p. 447-458 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    DNAJC6 mutations associated with early-onset Parkinson's disease

    Olgiati, S., Quadri, M., Fang, M., Rood, J. P. M. A., Saute, J. A., Chien, H. F., Bouwkamp, C. G., Graafland, J., Minneboo, M., Breedveld, G. J., Zhang, J., Verheijen, F. W., Boon, A. J. W., Kievit, A. J. A., Jardim, L. B., Mandemakers, W., Barbosa, E. R., Rieder, C. R. M., Leenders, K. L., Wang, J. & 1 others, Bonifati, V., 2016, In: Annals of Neurology. 79, 2, p. 244-256 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Dactylodinium pterobelotum gen. et sp. nov., a new marine woloszynskioid dinoflagellate positioned between the two families Borghiellaceae and Suessiaceae

    Takahashi, K., Moestrup, Øjvind, Wada, M., Ishimatsu, A., Nguyen, V. N., Fukuyo, Y. & Iwataki, M., Dec 2017, In: Journal of Phycology. 53, 6, p. 1223-1240 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    De novo pathway-based biomarker identification

    Alcaraz, N., List, M., Batra, R., Vandin, F., Ditzel, H. J. & Baumbach, J., 19 Sep 2017, In: Nucleic Acids Research. 45, 16, 11 p., e151.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    De novo assembly of a haplotype-resolved human genome

    Cao, H., Wu, H., Luo, R., Huang, S., Sun, Y., Tong, X., Xie, Y., Liu, B., Yang, H., Zheng, H., Li, J., Li, B., Wang, Y., Yang, F., Sun, P., Liu, S., Gao, P., Huang, H., Sun, J., Chen, D. & 21 others, He, G., Huang, W., Huang, Z., Li, Y., Tellier, L. C. A. M., Liu, X., Feng, Q., Xu, X., Zhang, X., Bolund, L., Krogh, Anders, Kristiansen, Karsten, Drmanac, R., Drmanac, S., Nielsen, R., Li, S., Wang, J., Yang, H., Li, Y., Wong, G. K. & Wang, J., 2015, In: Nature Biotechnology. 33, 6, p. 617-626 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    De novo whole-genome assembly and resequencing resources for the roan (Hippotragus equinus), an iconic African antelope

    Gonçalves, M., Siegismund, Hans Redlef, Van Vuuren, B. J., Koepfli, K., Ferrand, N. & Godinho, R., 2021, In: G3: Genes, Genomes, Genetics. 11, 2, 9 p., jkab002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Drosophila as a Model for Neuroendocrine Control of Renal Homeostasis

    Dow, J. A. T., Halberg, Kenneth Veland, Terhzaz, S. & Davies, S. A., 2018, Model Animals in Endocrinology: From Worms to Mouse to Man. Ludwig, M. & Levkowitz, G. (eds.). Newark: Wiley, 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  28. Published

    Drosophila Imp iCLIP identifies an RNA assemblage coordinating F-actin formation

    Hansen, H. T., Rasmussen, S. H., Adolph, S. K., Plass, M., Krogh, Anders, Sanford, J., Nielsen, Finn Cilius & Christiansen, Jan, 2015, In: Genome Biology (Online Edition). 16, 16 p., 123.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Drosophila TNF/TNFRs: At the crossroad between metabolism, immunity, and tissue homeostasis

    Colombani, Julien & Andersen, Ditte Skovaa, 2023, In: FEBS Letters. 597, 19, p. 2416-2432 17 p.

    Research output: Contribution to journal › Review › Research › peer-review

  30. Published

    Drosophila cytokine GBP2 exerts immune responses and regulates GBP1 expression through GPCR receptor Mthl10

    Ono, M., Matsumura, T., Sung, E. J., Koyama, Takashi, Ochiai, M., Shears, S. B. & Hayakawa, Y., 2024, In: Insect Biochemistry and Molecular Biology. 167, 7 p., 104086.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Ducatina umbilicata gen. et sp nov., a remarkable Trapeliaceae from the subantarctic islands in the Indian Ocean

    Ertz, D., Søchting, Ulrik, Gadea, A., Charrier, M. & Poulsen, R. S., Mar 2017, In: The Lichenologist. 49, 2, p. 127-140 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Escherichia coli belonging to ST131 rarely transfers blactx-m-15 to fecal Escherichia coli

    Thingholm, K. R., Hertz, F. B., Løbner-Olesen, Anders, Frimodt-Møller, N. & Nielsen, K. L., 2019, In: Infection and Drug Resistance. 12, p. 2429-2435

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Escherichia coli protein synthesis is limited by mRNA availability rather than ribosomal capacity during phosphate starvation

    Espinosa, R., Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2022, In: Frontiers in Microbiology. 13, 13 p., 989818.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Ex vivo Release of Calcitonin Gene-Related Peptide from the Trigeminovascular System in Rodents

    Rasmussen, R. H., Jansen-Olesen, I., Kristensen, D. M. & Christensen, S. L., 2022, In: Journal of Visualized Experiments. 183, 19 p., e63723.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    FUT2–ABO epistasis increases the risk of early childhood asthma and Streptococcus pneumoniae respiratory illnesses

    Ahluwalia, T. S., Eliasen, A. U., Sevelsted, A., Pedersen, C-E. T., Stokholm, J., Chawes, B., Bork-Jensen, J., Grarup, N., Pedersen, O., Hansen, T., Linneberg, A., Sharma, A., Weiss, S. T., Evans, M. D., Jackson, D. J., Morin, A., Krogfelt, K. A., Schjørring, S., Mortensen, P. B., Hougaard, D. M. & 13 others, Bybjerg-Grauholm, J., Bækvad-Hansen, M., Mors, O., Nordentoft, Merete, Børglum, A. D., Werge, Thomas, Agerbo, E., Gern, J. E., Lemanske, R. F., Ober, C., Pedersen, A. G., Bisgaard, H. & Bønnelykke, Klaus, 2020, In: Nature Communications. 11, 12 p., 6398.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Feldmannia Hamel, 1931-1939 Streblonema Derbés et Solier, 1851

    Pedersen, P. M., 2002, NEAS keys to benthic marine algae of the northeastern coast of North America from Long Island Sound to the Strait of Belle Isles (second edition). Massachusetts, USA: Northeast Algal Society, p. 61-63

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  37. Published

    Fragilariopsis (Bacillariophyceae) of the Northern hemisphere - morphology, taxonomy, phylogeny and distribution, with a description of F. pacifica sp. nov.

    Lundholm, Nina & Hasle, G. R., 2010, In: Phycologia. 49, 5, p. 438-460 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Gambierdiscus (gonyaulacales, dinophyceae) diversity in Vietnamese waters with description of G. vietnamensis sp. nov.

    Nguyen-Ngoc, L., Larsen, Jacob, Doan-Nhu, H., Nguyen, X. V., Chomérat, N., Lundholm, Nina, Phan-Tan, L., Dao, H. V., Nguyen, N. L., Nguyen, H. H. & Van Chu, T., 2023, In: Journal of Phycology. 59, 3, p. 496-517

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Giraffa camelopardalis

    Liu, C., Gao, J., Huang, J., Wang, W., Heller, Rasmus & Qiu, Q., 2021, In: Trends in Genetics. 37, 9, p. 860-861 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  40. Published

    Gymnodinium smaydae n. sp., a new planktonic phototrophic dinoflagellate from the coastal waters of Western Korea: morphology and molecular characterization

    Kang, N. S., Jeong, H. J., Moestrup, Øjvind, Lee, S. Y., Lim, A. S., Jang, T. Y., Lee, K. H., Lee, M. J., Jang, S. H., Potvin, E., Lee, S. K. & Noh, J. H., 2014, In: Journal of Eukaryotic Microbiology. 61, 2, p. 182-203 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    HER2-encoded mir-4728 forms a receptor-independent circuit with miR-21-5p through the non-canonical poly(A) polymerase PAPD5

    Newie, I., Søkilde, R., Persson, H., Jacomasso, T., Gorbatenko, A., Borg, Å., de Hoon, M., Pedersen, Stine Helene Falsig & Rovira, C., 2016, In: Scientific Reports. 6, 10 p., 35664.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Haslea silbo, A Novel Cosmopolitan Species of Blue Diatoms

    Gastineau, R., Hansen, G., Poulin, M., Lemieux, C., Turmel, M., Bardeau, J-F., Leignel, V., Hardivillier, Y., Morançais, M., Fleurence, J., Gaudin, P., Méléder, V., Cox, E. J., Davidovich, N. A., Davidovich, O. I., Witkowski, A., Kaczmarska, I., Ehrman, J. M., Onís, E. S., Quintana, A. M. & 11 others, Mucko, M., Mordret, S., Sarno, D., Jacquette, B., Falaise, C., Séveno, J., Lindquist, N. L., Kemp, P. S., Eker-Develi, E., Konucu, M. & Mouget, J., 2021, In: Biology. 10, 4, 27 p., 328.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Hodophilus (Clavariaceae, Agaricales) species with dark dots on the stipe: more than one species in Europe

    Adamčík, S., Jančovičová, S., Looney, B. P., Adamčíková, K., Griffith, G. W., Læssøe, Thomas, Moreau, P., Vizzini, A. & Matheny, P. B., Aug 2017, In: Mycological Progress. 16, 8, p. 811-821 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Hordeum vulgare differentiates its response to beneficial bacteria

    Duan, Y., Han, M., Grimm, M., Schierstaedt, J., Imani, J., Cardinale, M., Le Jean, M., Nesme, Joseph, Sørensen, Søren Johannes & Schikora, A., 2023, In: BMC Plant Biology. 23, 1, 16 p., 460.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    In Situ Macrofaunal Respiration Rates and their Importance for Benthic Carbon Mineralization on the Northwestern Black Sea Shelf

    Wenzhöfer, F., Riess, W. & Luth, U., 2002, In: Marine Biology Research. 56(2), p. 87-100

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    In Vitro Characterization of a Threonine-Ligated Molybdenyl-Sulfide Cluster as a Putative Cyanide Poisoning Antidote: Intracellular Distribution, Effects on Organic Osmolyte Homeostasis, and Induction of Cell Death

    Gretarsdottir, J. M., Lambert, Ian Henry, Stürup, Stefan & Suman, S. G., 2022, In: ACS Pharmacology and Translational Science. 5, 10, p. 907–918

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    In Vitro Community Synergy between Bacterial Soil Isolates Can Be Facilitated by pH Stabilization of the Environment

    Herschend, J., Koren, K., Røder, Henriette Lyng, Brejnrod, A., Kühl, Michael & Burmølle, Mette, 2018, In: Applied and Environmental Microbiology. 84, 21, e01450.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    In Vitro Evolution of Specific Phages Infecting the Fish Pathogen Flavobacterium psychrophilum

    Castillo, D., Højsting, A. R., Roosvall, A., Smyrlis, G., Jørgensen, J. & Middelboe, Mathias, 2022, In: PHAGE: Therapy, Applications, and Research. 3, 1, p. 28-37 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    In silico evolution of lysis-lysogeny strategies reproduces observed lysogeny propensities in temperate bacteriophages

    Sinha, V., Goyal, A., Svenningsen, Sine Lo, Semsey, S. & Krishna, S., 26 Jul 2017, In: Frontiers in Microbiology. 8, 11 p., 1386.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    In situ Autumn ozone fumigation of mature Norway Spruce - Effects on Net Photosynthesis

    Mikkelsen, T. N. & Ro-Poulsen, Helge, 2002, In: Phyton (Austria). 42, p. 97-104

    Research output: Contribution to journal › Journal article › Research › peer-review

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