The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis

Research output: Contribution to journal › Journal article › Research › peer-review

Standard

The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis. / Lin, Senjie; Cheng, Shifeng; Song, Bo; Zhong, Xiao; Lin, Xin; Li, Wujiao; Li, Ling; Zhang, Yaqun; Zhang, Huan; Ji, Zhiliang; Cai, Meichun; Zhuang, Yunyun; Shi, Xinguo; Lin, Lingxiao; Wang, Lu; Wang, Zhaobao; Liu, Xin; Yu, Sheng; Zeng, Peng; Hao, Han; Zou, Quan; Chen, Chengxuan; Li, Yanjun; Wang, Ying; Xu, Chunyan; Meng, Shanshan; Xu, Xun; Wang, Jun; Yang, Huanming; Campbell, David A.; Sturm, Nancy R.; Dagenais-Bellefeuille, Steve; Morse, David.

In: Science, Vol. 350, No. 6261, 2015, p. 691-694.

Research output: Contribution to journal › Journal article › Research › peer-review

Harvard

Lin, S, Cheng, S, Song, B, Zhong, X, Lin, X, Li, W, Li, L, Zhang, Y, Zhang, H, Ji, Z, Cai, M, Zhuang, Y, Shi, X, Lin, L, Wang, L, Wang, Z, Liu, X, Yu, S, Zeng, P, Hao, H, Zou, Q, Chen, C, Li, Y, Wang, Y, Xu, C, Meng, S, Xu, X, Wang, J, Yang, H, Campbell, DA, Sturm, NR, Dagenais-Bellefeuille, S & Morse, D 2015, 'The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis', Science, vol. 350, no. 6261, pp. 691-694. https://doi.org/10.1126/science.aad0408

APA

Lin, S., Cheng, S., Song, B., Zhong, X., Lin, X., Li, W., Li, L., Zhang, Y., Zhang, H., Ji, Z., Cai, M., Zhuang, Y., Shi, X., Lin, L., Wang, L., Wang, Z., Liu, X., Yu, S., Zeng, P., ... Morse, D. (2015). The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis. Science, 350(6261), 691-694. https://doi.org/10.1126/science.aad0408

Vancouver

Lin S, Cheng S, Song B, Zhong X, Lin X, Li W et al. The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis. Science. 2015;350(6261):691-694. https://doi.org/10.1126/science.aad0408

Author

Lin, Senjie ; Cheng, Shifeng ; Song, Bo ; Zhong, Xiao ; Lin, Xin ; Li, Wujiao ; Li, Ling ; Zhang, Yaqun ; Zhang, Huan ; Ji, Zhiliang ; Cai, Meichun ; Zhuang, Yunyun ; Shi, Xinguo ; Lin, Lingxiao ; Wang, Lu ; Wang, Zhaobao ; Liu, Xin ; Yu, Sheng ; Zeng, Peng ; Hao, Han ; Zou, Quan ; Chen, Chengxuan ; Li, Yanjun ; Wang, Ying ; Xu, Chunyan ; Meng, Shanshan ; Xu, Xun ; Wang, Jun ; Yang, Huanming ; Campbell, David A. ; Sturm, Nancy R. ; Dagenais-Bellefeuille, Steve ; Morse, David. / The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis. In: Science. 2015 ; Vol. 350, No. 6261. pp. 691-694.

Bibtex

@article{67e7b2bda93149af88d5e0b628d235de,
title = "The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis",
abstract = "Dinoflagellates are important components of marine ecosystems and essential coral symbionts, yet little is known about their genomes. We report here on the analysis of a high-quality assembly from the 1180-megabase genome of Symbiodinium kawagutii. We annotated protein-coding genes and identified Symbiodinium-specific gene families. No whole-genome duplication was observed, but instead we found active (retro) transposition and gene family expansion, especially in processes important for successful symbiosis with corals. We also documented genes potentially governing sexual reproduction and cyst formation, novel promoter elements, and a microRNA system potentially regulating gene expression in both symbiont and coral.We found biochemical complementarity between genomes of S. kawagutii and the anthozoan Acropora, indicative of host-symbiont coevolution, providing a resource for studying the molecular basis and evolution of coral symbiosis.",
author = "Senjie Lin and Shifeng Cheng and Bo Song and Xiao Zhong and Xin Lin and Wujiao Li and Ling Li and Yaqun Zhang and Huan Zhang and Zhiliang Ji and Meichun Cai and Yunyun Zhuang and Xinguo Shi and Lingxiao Lin and Lu Wang and Zhaobao Wang and Xin Liu and Sheng Yu and Peng Zeng and Han Hao and Quan Zou and Chengxuan Chen and Yanjun Li and Ying Wang and Chunyan Xu and Shanshan Meng and Xun Xu and Jun Wang and Huanming Yang and Campbell, {David A.} and Sturm, {Nancy R.} and Steve Dagenais-Bellefeuille and David Morse",
year = "2015",
doi = "10.1126/science.aad0408",
language = "English",
volume = "350",
pages = "691--694",
journal = "Science",
issn = "0036-8075",
publisher = "American Association for the Advancement of Science",
number = "6261",

}

RIS

TY - JOUR

T1 - The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis

AU - Lin, Senjie

AU - Cheng, Shifeng

AU - Song, Bo

AU - Zhong, Xiao

AU - Lin, Xin

AU - Li, Wujiao

AU - Li, Ling

AU - Zhang, Yaqun

AU - Zhang, Huan

AU - Ji, Zhiliang

AU - Cai, Meichun

AU - Zhuang, Yunyun

AU - Shi, Xinguo

AU - Lin, Lingxiao

AU - Wang, Lu

AU - Wang, Zhaobao

AU - Liu, Xin

AU - Yu, Sheng

AU - Zeng, Peng

AU - Hao, Han

AU - Zou, Quan

AU - Chen, Chengxuan

AU - Li, Yanjun

AU - Wang, Ying

AU - Xu, Chunyan

AU - Meng, Shanshan

AU - Xu, Xun

AU - Wang, Jun

AU - Yang, Huanming

AU - Campbell, David A.

AU - Sturm, Nancy R.

AU - Dagenais-Bellefeuille, Steve

AU - Morse, David

PY - 2015

Y1 - 2015

N2 - Dinoflagellates are important components of marine ecosystems and essential coral symbionts, yet little is known about their genomes. We report here on the analysis of a high-quality assembly from the 1180-megabase genome of Symbiodinium kawagutii. We annotated protein-coding genes and identified Symbiodinium-specific gene families. No whole-genome duplication was observed, but instead we found active (retro) transposition and gene family expansion, especially in processes important for successful symbiosis with corals. We also documented genes potentially governing sexual reproduction and cyst formation, novel promoter elements, and a microRNA system potentially regulating gene expression in both symbiont and coral.We found biochemical complementarity between genomes of S. kawagutii and the anthozoan Acropora, indicative of host-symbiont coevolution, providing a resource for studying the molecular basis and evolution of coral symbiosis.

AB - Dinoflagellates are important components of marine ecosystems and essential coral symbionts, yet little is known about their genomes. We report here on the analysis of a high-quality assembly from the 1180-megabase genome of Symbiodinium kawagutii. We annotated protein-coding genes and identified Symbiodinium-specific gene families. No whole-genome duplication was observed, but instead we found active (retro) transposition and gene family expansion, especially in processes important for successful symbiosis with corals. We also documented genes potentially governing sexual reproduction and cyst formation, novel promoter elements, and a microRNA system potentially regulating gene expression in both symbiont and coral.We found biochemical complementarity between genomes of S. kawagutii and the anthozoan Acropora, indicative of host-symbiont coevolution, providing a resource for studying the molecular basis and evolution of coral symbiosis.

U2 - 10.1126/science.aad0408

DO - 10.1126/science.aad0408

M3 - Journal article

C2 - 26542574

AN - SCOPUS:84947432405

VL - 350

SP - 691

EP - 694

JO - Science

JF - Science

SN - 0036-8075

IS - 6261

ER -

ID: 154369366