Welcome to the Brodersen Lab
Small RNAs in plants:
fundamental regulators of gene expression
Small silencing RNAs are the hallmark of a collection of gene regulatory mechanisms known as RNA silencing. In RNA silencing, the small (20-30 nucleotide long) RNAs act as specificity determinants that use base pairing to guide repressive protein complexes to complementary RNA molecules. This simple, versatile mehanism is of tremendous importance in regulation of mRNAs important for plant and animal development and stress responses, particularly via a specific class of small RNAs called microRNAs (miRNAs).
In plants and animals, small RNA based mechanisms are also at the heart of epigenetic silencing mechanisms that act to limit transposon activity and thereby contribute to the maintenance of genome stability. In a related process, RNA silencing is also being employed as an RNA based immune system to combat infections by RNA viruses in plants and insects. It is an important objective of our research to understand how the RNA silencing mechanism is coupled to protein-based sensing of pathogens via immune receptors. This project is starting January 2014, and is supported by a Sapere Aude grant from the Danish Council for Independent Research.
Our group also maintains a strong focus on understanding the mechanistic basis of miRNA function in plants. We make extensive use of genetic screens coupled to next-generation DNA sequencing to identify new components involved in discrete steps of the pathway. We also employ biochemical methods to study protein complexes with important functions in the pathway. We have previously shown that a miRNA effector complex is associated with a membrane compartment, and are studying how the membrane association occurs and what its functional role is. We are also interested in elucidating how miRNAs bring about translational repression of mRNA in plants, and understanding the relation of this mode of regulation to mRNA degradation.
Novo Nordisk Foundation
European Research Council
Villum Foundation
Lundbeck Foundation
Nordforsk
Danish Council for Independent Research (DFF)
Carlsbergfondet
Augustinusfonden
Brdr Hartmann Fonden
Group photo, December 2016
Group photo, November 2013
Group photo, November 2012
Group photo, March 2012
Past team members
Alec Michels | MSc Student |
Alexander Holmegaard Andersen | Research Assistant |
Alexander Virklund Nielsen | BSc Student |
Anca Stoica | Research Assistant |
Anders Olsen | MSc Student |
Andrea Barghetti | PhD student |
Anja Branscheid | Postdoc |
Anna Offensgaard | BSc student |
Aske Normann Biener | Technician Student |
Barbara Brandao | Project student |
Bruno Palhais | MSc Student |
Cathrine Nordgaard | Undergraduate student helper |
Céline Drouvroy | IUT project student |
Christian Poulsen | Postdoc |
Denice Fleur Krøger Hansen | BSc student |
Kamilla Kristiansen | Technician Student |
Krista Warming Weiss | Technician Student |
Kristine Frøsig Moseholm | Undergraduate student helper |
Lariska Bagger | Technician Student |
Lars Sjögren | Postdoc |
Maïna Floris | Postdoc |
Mathias Henning Hansen | Research Assistant |
Meriem Senissar | Research Assistant |
Michaela Oplova | Erasmus Student |
Miranda van Wonterghem | PhD Student |
Nina Sibbesen | Undergraduate student helper |
Nynne Nielsen | BSc Student |
Rikke Brandstrup Larsen | Undergraduate student helper |
Sotirios Tasigiorgos | MSc Student |
Swathi Kausika | PhD Student |
Tabatha Emilia de Araujo Constantini | Technician Student |
Theis Hjalte Thorn Jakobsen | BSc Student |
Contact
Professor Peter Brodersen
Computational and RNA Biology
Ole Maaløesvej 5, 3.1.13
2200 Copenhagen N
PBrodersen@bio.ku.dk
Phone: +45 35 32 20 31