PhD theses sorted after supervisor


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Exploring the central dogma from both ends. Omics integration of Hi-C sequencing and Raman...
Vipin KumarSUPERVISOR: Albin Sandelin 15-10-2018

On Gene Regulation in Eukaryotes. Computational approaches to decipher transcriptional reg...
Xiaobei ZhaoSUPERVISOR: Albin Sandelin 01-02-2012

Computational approaches to understand transcriptional regulation and alternative promoter...
Mette JørgensenSUPERVISOR: Albin Sandelin 22-04-2014

Investigation of acid adaptation in the tumor microenvironment at gene, promoter and enhan...
Jiayi YaoSUPERVISOR: Albin Sandelin 30-04-2023

Organism- and disease-specific atlases of transcription start sites using Cap Analysis of ...
Malte ThodbergSUPERVISOR: Albin Sandelin 14-03-2018

Characterization of industrially-produced Lacticaseibacillus rhamnosus GG and Lactobacillu...
Marianne Stage StrickertssonSUPERVISOR: Albin Sandelin 16-08-2021

Investigation of the Impact of the RNA Exosome on Cellular Transcriptome and Function
Mengjun WuSUPERVISOR: Albin Sandelin 07-03-2021

Transcriptional diversity and regulation across time and states
Kristoffer Vitting-SeerupSUPERVISOR: Albin Sandelin 30-09-2016

Between inflammation, homeostasis and adaptation: Systemic and tissue-specific responses t...
Signe Schmidt Kjølner HansenSUPERVISOR: Albin Sandelin & Karin Sørig Hougaard 13-02-2023

Investigation of transcriptional output and regulation in plants using Cap Analysis of Gen...
Axel ThieffrySUPERVISOR: Albin Sandelin & Peter Brodersen 15-01-2020

Deciphering Transcriptional Regulation
Eivind ValenSUPERVISOR: Albin Sandelin and Anders Krogh 15-12-2009

The traditional diet and genetic architecture of the Greenlandic Inuit and their cardiovas...
Ninna Karsbæk SenftleberSUPERVISOR: Anders Albrechtsen 15-02-2020

Method Development for Next-Generation Sequencing Data in Population Genetics
Jonas MeisnerSUPERVISOR: Anders Albrechtsen 15-12-2020

Probabilistic methods for the analysis of genome-wide data for admixed populations includi...
Emil JørsboeSUPERVISOR: Anders Albrechtsen 15-09-2019

Demographic inferences from large-scale NGS data
Casper-Emil Tingskov PedersenSUPERVISOR: Anders Albrechtsen 31-08-2017

Unraveling the genetic basis of neurological diseases and thalassemia: the clinical utilit...
Wenqian ZhangSUPERVISOR: Anders Albrechtsen 16-06-2022

Statistical approaches accommodating uncertainty in modern genomic data
Line SkotteSUPERVISOR: Anders Albrechtsen 15-02-2015

Efficient statistical and computational methods for large scale sequencing data
Zilong LiSUPERVISOR: Anders Albrechtsen 03-11-2023

Clinical application of high-throughput sequencing technology in prenatal screening and di...
Fanwei ZengSUPERVISOR: Anders Albrechtsen 30-05-2022

Probabilistic modelling in genomics
Malthe Sebro RasmussenSUPERVISOR: Anders Albrechtsen & Carsten Wiuf 15-09-2023

Exploring antidepressant treatment response using biological and clinical measurements
Anne Krogh NøhrSUPERVISOR: Anders Albrechtsen, Ida Moltke & Morana Vitezic 01-04-2022

Computational Investigations of Post-transcriptional Regulation
Simon Horskjær RasmussenSUPERVISOR: Anders Krogh 05-09-2016

Probabilistic methods for processing high-throughput sequencing signals
Lasse MarettySUPERVISOR: Anders Krogh 07-07-2016

Blastocystis in a gut microbiota context and aspects of Blastocystis genomic...
Lee Poul O’Brien AndersenSUPERVISOR: Anders Krogh 29-01-2016

Convergent and divergent adaptations of subterranean rodents
Xiaodong FangSUPERVISOR: Anders Krogh 30-03-2015

Aberrant Gene Expression in Acute Myeloid Leukaemia
Frederik Otzen BaggerSUPERVISOR: Anders Krogh 01-10-2014

The prognostic, diagnostic, and therapeutic potential of tumor antigens
Lars Rønn OlsenSUPERVISOR: Anders Krogh 21-11-2013

Probabilistic transcriptome assembly and variant graph genotyping
Jonas Andreas SibbesenSUPERVISOR: Anders Krogh 08-06-2016

Analysing human genomes at different scales
Siyang LiuSUPERVISOR: Anders Krogh & Anders Albrechtsen 27-09-2017

MHC region and its related disease study
Hongzhi CaoSUPERVISOR: Anders Krogh & Jun Wang 23-03-2015

Sequence Analysis
Søren Kaae SønderbySUPERVISOR: Anders Krogh & Ole Winther 21-12-2017

Computational Cancer Biology: From Carcinogenesis to Metastasis
Bogumil KaczkowskiSUPERVISOR: Anders Krogh and Ole Winther 15-04-2012

Bioinformatical approaches to RNA structure prediction & Sequencing of an ancient human ge...
Stinus LindgreenSUPERVISOR: Anders Krogh and Paul P. Gardner 29-01-2010

Predicting peptide-MHC stability and immunogenicity with deep learning
Marek PracharSUPERVISOR: Frederik O. Bagger, Sune Justesen & Ole Winther 02-01-2024

Chimpanzee history and evolution
Christina HvilsomSUPERVISOR: Hans R. Siegismund 15-12-2011

Demographic History and Phylogeography of Large African Mammals
Rasmus HellerSUPERVISOR: Hans R. Siegismund 15-12-2011

Adaptive Evolution and Demographic History of African Great Apes
Peter FrandsenSUPERVISOR: Hans R. Siegismund & Anders Albrechtsen 13-08-2016

Relatedness, admixture and the genetic history of Greenland-European contact
Ryan Kele WaplesSUPERVISOR: Ida Moltke & Anders Albrechtsen 15-04-2019

Methods for RNA analysis - Functional investigation of RNA by interaction proteomics and h...
Signe OlivariusSUPERVISOR: Jan Christiansen & Jeppe Vinther 17-02-2014

High-throughput sequencing based methods of RNA structure investigation
Lukasz KielpinskiSUPERVISOR: Jeppe Vinther & Jan Christiansen 14-02-2014

Application of Microarray technology in research and diagnostics: differential expression ...
Rehannah Borup Helweg-LarsenSUPERVISOR: Ole Winther 23-06-2015

Inference and Learning in Deep Generative Models
Casper Kaae SønderbySUPERVISOR: Ole Winther & Anders Krogh 03-09-2018

Functional Analysis of Structural Elements of ARGONAUTE1 in Arabidopsis thaliana
Ida Marie Zobbe SjøgaardSUPERVISOR: Peter Brodersen 02-01-2023

Investigating membrane-bound Argonaute functions in Arabidopsis
Andrea BarghettiSUPERVISOR: Peter Brodersen 15-05-2017

Post-transcriptional gene regulation mediated by small RNAs and ARGONAUTE1 in Arabidops...
Laura Arribas-HernandezSUPERVISOR: Peter Brodersen 17-07-2015

Non-coding RNAs in Arabidopsis
Miranda van WonterhgemSUPERVISOR: Peter Brodersen 02-11-2015

Investigation the possible function of DCL2 as a viral RNA sensor in Arabidopsis
Lijuan HanSUPERVISOR: Peter Brodersen 18-12-2019

Requirement of a deeply conserved ARGONAUTE phospho-cluster for target-mediated microRNA d...
Fangyue GuoSUPERVISOR: Peter Brodersen 30-09-2021

Regulated proteolysis of Arabidopsis ARGONAUTE1
Swathi Pranavi KausikaSUPERVISOR: Peter Brodersen 15-08-2015

Mechanisms Underlying siRNA Amplification in Arabidopsis thaliana
Maria Louisa VighSUPERVISOR: Peter Brodersen 20-02-2022

Functions of m6A-YTH modules in plants Lessons from high-throughput sequencing analyses
Carlotta PorcelliSUPERVISOR: Peter Brodersen & Robin Andersson 18-04-2023

Application of whole genome sequencing data in population genetics: identifying sex-linked...
Casia NursyifaSUPERVISOR: Rasmus Heller 01-08-2023

Regulation and maintenance of transcriptional specificity
Maria DalbySUPERVISOR: Robin Andersson 15-06-2018

On the origin of regulatory elements - Computational analyses of transposable elements in ...
Stylianos BakoulisSUPERVISOR: Robin Andersson 22-04-2022

Regulation and impact of transcriptional variation
Hjörleifur EinarssonSUPERVISOR: Robin Andersson 29-12-2021

Deciphering regulatory mechanisms underlying gene co-activity
Lucas van DuinSUPERVISOR: Robin Andersson 13-10-2022

Inference problems in structural biology: protein structures and protein structure ensembl...
Simon OlssonSUPERVISOR: Thomas Hamelryck 26-03-2013

Probabilistic equilibrium sampling of protein structures from SAXS data and a coarse grain...
Christian AndreettaSUPERVISOR: Thomas Hamelryck 15-11-2013

Probabilistic methods inmacromolecular structure prediction
Jes FrellsenSUPERVISOR: Thomas Hamelryck 07-03-2011

Inferential Determination of Protein Structure from Small-Angle X-ray Scattering Data
Kasper StovgaardSUPERVISOR: Thomas Hamelryck & Anders Krogh 01-03-2012