- 2022
- Published
Genetic loci and prioritization of genes for kidney function decline derived from a meta-analysis of 62 longitudinal genome-wide association studies
Gorski, M., Rasheed, H., Teumer, A., Thomas, L. F., Graham, S. E., Sveinbjornsson, G., Winkler, T. W., Günther, F., Stark, K. J., Chai, J-F., Tayo, B. O., Wuttke, M., Li, Y., Tin, A., Ahluwalia, T. S., Ärnlöv, J., Åsvold, B. O., Bakker, S. J. L., Banas, B., Bansal, N. & 29 others, , 2022, In: Kidney International. 102, 3, p. 624-639 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A polygenic architecture with habitat-dependent effects underlies ecological differentiation in Silene
Gramlich, S., Liu, Xiaodong, Favre, A., Buerkle, C. A. & Karrenberg, S., 2022, In: New Phytologist. 235, 4, p. 1641-1652 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Context dependent prediction in DNA sequence using neural networks
Grønbæk, Christian, Liang, Yuhu, Elliott, Desmond & Krogh, Anders, 2022, In: PeerJ. 10, 22 p., e13666.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conflicts between large carnivores and local pastoralists around Niokolo Koba National Park, Senegal
Gueye, M., Van Cauteren, D., Mengual, L., Pellaton, R., Leirs, H., Bertola, Laura & de Iongh, H., 2022, In: European Journal of Wildlife Research. 68, 1, 11 p., 9.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Requirement of a deeply conserved ARGONAUTE phospho-cluster for target- mediated microRNA degradation in plants
Guo, F., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 118 p.Research output: Book/Report › Ph.D. thesis › Research
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Persistent Topology of Protein Space
Hamilton, W., Borgert, J. E., Hamelryck, Thomas Wim & Marron, J. S., 2022, Research in Computational Topology 2. Springer, p. 223-244 (Association for Women in Mathematics Series, Vol. 30).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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H3K9 dimethylation safeguards cancer cells against activation of the interferon pathway
Hansen, A. M., Ge, Y., Schuster, Mikkel Bruhn, Pundhir, Sachin, Jakobsen, J. S., Kalvisa, A., Tapia, Marta Cecylia, Gordon, Sandra, Ambri, F., Bagger, F. O., Pandey, D., Helin, K. & Porse, Bo Torben, 2022, In: Science Advances. 8, 11, eabf8627.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cardiovascular Autonomic Neuropathy in Type 1 Diabetes Is Associated With Disturbances in TCA, Lipid, and Glucose Metabolism
Hansen, C. S., Suvitaival, T., Theilade, Karen Simone, Mattila, I., Lajer, M., Trošt, K., Ahonen, L., Hansen, T. W., Legido-Quigley, C., Rossing, Peter & Ahluwalia, Tarun Veer Singh, 2022, In: Frontiers in Endocrinology. 13, 831793.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Non-dipping and higher nocturnal blood pressure are associated with risk of mortality and development of kidney disease in type 1 diabetes
Hjortkjær, H., Persson, F., Theilade, S., Winther, S. A., Tofte, N., Ahluwalia, Tarun Veer Singh & Rossing, Peter, 2022, In: Journal of Diabetes and its Complications. 36, 9, 6 p., 108270.Research output: Contribution to journal › Journal article › Research › peer-review
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NetSurfP-3.0: accurate and fast prediction of protein structural features by protein language models and deep learning
Høie, M. H., Kiehl, E. N., Petersen, Bent, Nielsen, M., Winther, Ole, Nielsen, H., Hallgren, J. & Marcatili, P., 2022, In: Nucleic Acids Research. 50, W1, p. W510-W515 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Semi-automated assembly of high-quality diploid human reference genomes
Jarvis, E. D., Formenti, G., Rhie, A., Guarracino, A., Yang, C., Wood, J., Tracey, A., Thibaud-Nissen, F., Vollger, M. R., Porubsky, D., Cheng, H., Asri, M., Logsdon, G. A., Carnevali, P., Chaisson, M. J. P., Chin, C. S., Cody, S., Collins, J., Ebert, P., Escalona, M. & 31 others, , 2022, In: Nature. 611, 7936, 34 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient and historical DNA in conservation policy
Jensen, E. L., Díez-del-Molino, D., Gilbert, M Thomas P, Bertola, Laura, Borges, F., Cubric-Curik, V., de Navascués, M., Frandsen, P., Heuertz, M., Hvilsom, C., Jiménez-Mena, B., Miettinen, A., Moest, M., Chrzanová Pecnerová, Patrícia, Barnes, I. & Vernesi, C., 2022, In: Trends in Ecology and Evolution. 37, 5, p. 420-429 10 p.Research output: Contribution to journal › Review › Research › peer-review
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Orthologous microsatellites, transposable elements, and DNA deletions correlate with generation time and body mass in neoavian birds
Ji, Y., Feng, S., Wu, L., Fang, Q., Brüniche-Olsen, Anna, DeWoody, J. A., Cheng, Y., Zhang, D., Hao, Y., Song, G., Qu, Y., Suh, A., KU, thw266, Hackett, S. J. & Lei, F., 2022, In: Science Advances. 8, 35, 11 p., eabo0099.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reversible mutations in gliding motility and virulence genes: A flexible and efficient phage defence mechanism in Flavobacterium psychrophilum
Jørgensen, J., Sundell, K., Castillo, D., Dramshøj, L. S., Jørgensen, N. B., Madsen, S. B., Landor, L., Wiklund, T., Donati, V. L., Madsen, L., Dalsgaard, I. & Middelboe, Mathias, 2022, In: Environmental Microbiology. 24, 10, p. 4915-4930Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An LDLR missense variant poses high risk of familial hypercholesterolemia in 30% of Greenlanders and offers potential of early cardiovascular disease intervention
Jørsboe, E., Andersen, M. K., Skotte, L., Stæger, F. F., Færgeman, N. J., Hanghøj, K., Santander, C. G., Senftleber, N. K., Diaz, L. J., Overvad, M., Waples, R. K., Geller, F., Bjerregaard, P., Melbye, M., Larsen, C. V. L., Feenstra, B., Anders Koch, K., Jørgensen, M. E., Grarup, N., Moltke, I. & 2 others, , 2022, In: Human Genetics and Genomics Advances. 3, 4, 10 p., 100118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Efficient approaches for large-scale GWAS with genotype uncertainty
Jørsboe, E. & Albrechtsen, Anders, 2022, In: G3: Genes, Genomes, Genetics (Bethesda). 12, 1, 9 p., jkab385.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disease-linked mutations cause exposure of a protein quality control degron
Kampmeyer, Caroline, Larsen-Ledet, Sven, Wagnkilde, M. R., Michelsen, M., Iversen, Henriette Kring Mangor, Nielsen, S. V., Lindemose, Søren, Caregnato, A., Ravid, T., Stein, Amelie, Teilum, Kaare, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2022, In: Structure. 30, 9, p. 1245-1253.e5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Overexpression of ATG8/LC3 enhances wound-induced somatic reprogramming in Physcomitrium patens
Kanne, J. V., Ishikawa, M., Bressendorff, Simon, Ansbøl, Jeppe, Hasebe, M., Rodriguez, Eleazar & Petersen, Morten, 2022, In: Autophagy. 18, 6, p. 1463-1466 4 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Genomic surveillance of SARS-COV-2 reveals diverse circulating variant lineages in Nairobi and Kiambu Counties, Kenya
Kuja, J. O., Kanoi, B. N., Balboa, Renzo Fidel Ferdinando, Shiluli, C., Maina, M., Waweru, H., Gathii, K., Mungai, M., Masika, M., Anzala, O., Mwau, M., Clark, T. G., Waitumbi, J. & Gitaka, J., 2022, In: BMC Genomics. 23, 1, 8 p., 627.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptional reprogramming during floral fate acquisition
Larrieu, A., Brunoud, G., Guerault, A., Laine, S., Hennet, L., Stigliani, Arnaud, Gildea, I., Just, J., Soubigou-Taconnat, L., Balzergue, S., Davies, B., Scarpella, E., Helariutta, Y., Parcy, F. & Vernoux, T., 2022, In: iScience. 25, 7, 17 p., 104683.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
De Novo Assembly of 20 Chicken Genomes Reveals the Undetectable Phenomenon for Thousands of Core Genes on Microchromosomes and Subtelomeric Regions
Li, M., Sun, C., Xu, N., Bian, P., Tian, X., Wang, X., Wang, Y., Jia, X., Heller, R., Wang, M., Wang, F., Dai, X., Luo, R., Guo, Y., Wang, X., Yang, P., Hu, D., Liu, Z., Fu, W., Zhang, S. & 10 others, , 2022, In: Molecular Biology and Evolution. 39, 4, 16 p., msac066.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Context dependency of nucleotide probabilities and variants in human DNA
Liang, Yuhu, Grønbæk, Christian, Fariselli, P. & Krogh, Anders, 2022, In: BMC Genomics. 23, 1, 15 p., 87.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Urinary Proteomics Identifies Cathepsin D as a Biomarker of Rapid eGFR Decline in Type 1 Diabetes
Limonte, C. P., Valo, E., Drel, V., Natarajan, L., Darshi, M., Forsblom, C., Henderson, C. M., Hoofnagle, A. N., Ju, W., Kretzler, M., Montemayor, D., Nair, V., Nelson, R. G., O’toole, J. F., Toto, R. D., Rosas, S. E., Ruzinski, J., Sandholm, N., Schmidt, I. M., Vaisar, T. & 12 others, , 2022, In: Diabetes Care. 45, 6, p. 1416-1427 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Origin and expansion of the world’s most widespread pinniped: Range-wide population genomics of the harbour seal (Phoca vitulina)
Liu, X., Schjøtt, S. R., Granquist, S. M., Rosing-Asvid, A., Dietz, R., Teilmann, J., Galatius, A., Cammen, K., O’Corry-Crowe, G., Harding, K., Härkönen, T., Hall, A., Carroll, E. L., Kobayashi, Y., Hammill, M., Stenson, G., Kirstine Frie, A., Lydersen, C., Kovacs, K. M., Andersen, L. W. & 6 others, , 2022, In: Molecular Ecology. 31, 6, p. 1682-1699Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circle-Seq reveals genomic and disease-specific hallmarks in urinary cell-free extrachromosomal circular DNAs
Lv, W., Pan, X., Han, P., Wang, Z., Feng, W., Xing, X., Wang, Q., Qu, K., Zeng, Y., Zhang, C., Xu, Z., Li, Y., Zheng, T., Lin, L., Liu, C., Liu, X., Li, H., Henriksen, R. A., Bolund, L., Lin, L. & 7 others, , 2022, In: Clinical and Translational Medicine. 12, 4, 16 p., e817.Research output: Contribution to journal › Journal article › Research › peer-review
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Reconstructing genome evolution in historic samples of the Irish potato famine pathogen
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Natural selection affects multiple aspects of genetic variation at putatively peutral sites across the human genome
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True single-molecule DNA sequencing of a pleistocene horse bone
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Characterizing glucokinase variant mechanisms using a multiplexed abundance assay
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Genetic diversity of lion populations in Kenya: Evaluating past management practices and recommendations for future conservation actions
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MYC activity at enhancers drives prognostic transcriptional programs through an epigenetic switch
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