Sine Lo Svenningsen
Associate Professor, Associate Professor - Promotion Programme
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tRNAs Are Stable After All: Pitfalls in Quantification of tRNA from Starved Escherichia coli Cultures Exposed by Validation of RNA Purification Methods
Prossliner, T., Agrawal, S., Heidemann, Ditte Fogh, Sorensen, M. A. A. & Svenningsen, Sine Lo, 2023, In: mBio. 14, 1, 18 p., e02805-22.Research output: Contribution to journal › Journal article › Research › peer-review
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Valine-Induced Isoleucine Starvation in Escherichia coli K-12 Studied by Spike-In Normalized RNA Sequencing
Gummesson, Bertil, Shah, S. A., Borum, A. S., Fessler, M., Mitarai, Namiko, Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2020, In: Frontiers in Genetics. 11, 17 p., 144.Research output: Contribution to journal › Journal article › Research › peer-review
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Transfer RNA is highly unstable during early amino acid starvation in Escherichia coli
Svenningsen, Sine Lo, Kongstad, M., Stenum, T. S., Muñoz Gomez, A. J. & Sørensen, Michael Askvad, Jan 2017, In: Nucleic Acids Research. 45, 2, p. 793-804 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Transfer RNA instability as a stress response in Escherichia coli: rapid dynamics of the tRNA pool as a function of demand
Sørensen, Michael Askvad, Fehler, A. O. & Svenningsen, Sine Lo, 2018, In: RNA Biology. 15, 4/5, p. 586-593 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Three Ribosomal Operons of Escherichia coli Contain Genes Encoding Small RNAs That Interact With Hfq and CsrA in vitro
Stenum, T. S., Kongstad, M., Holmqvist, E., Kallipolitis, B., Svenningsen, Sine Lo & Sørensen, Michael Askvad, 2021, In: Frontiers in Microbiology. 12, 18 p., 625585.Research output: Contribution to journal › Journal article › Research › peer-review
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Pedersen, M., Nissen, S., Mitarai, Namiko, Svenningsen, Sine Lo, Sneppen, Kim & Pedersen, Steen, 2011, In: Journal of Molecular Biology. 407, 1, p. 35-44 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The dynamics of phage predation on a microcolony
Eriksen, R. S., Larsen, Frej Andreas Nøhr, Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 2024, In: Biophysical Journal. 123, 2, p. 147-156 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Strain-specific quorum-sensing responses determine virulence properties in Vibrio anguillarum
Mauritzen, Jesper Juel, Søndberg, E., Kalatzis, Panagiotis, Roager, L., Gram, L., Svenningsen, Sine Lo & Middelboe, Mathias, 2023, In: Environmental Microbiology. 25, 7, 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Small RNA-Based Regulation of Bacterial Quorum Sensing and Biofilm Formation
Svenningsen, Sine Lo, 2018, In: Microbiology Spectrum. 6, 4, 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Small RNA target genes and regulatory connections in the Vibrio cholerae quorum sensing system
Hammer, B. K. & Svenningsen, Sine Lo, 2011, Quorum sensing: Methods and protocols. Rumbaugh, K. P. (ed.). Humana Press, Vol. 692. p. 189-206 18 p. (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Small RNA control of cell-to-cell communication in Vibrio harveyi and Vibrio cholerae small RNA control of quorum sensing
Svenningsen, Sine Lo, 1 Dec 2008, Evolution from Cellular to Social Scales. p. 45-59 15 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
Small RNA control of cell-to-cell communication in Vibrio harveyi and Vibrio cholerae
Svenningsen, Sine Lo, 2008, Evolution from Cellular to Social Scales. Skjeltorp, A. T. & Belushkin, A. V. (eds.). Springer Publishing Company, p. 45-61 16 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
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Single-cell Analysis of Lambda Immunity Regulation
Bæk, K. T., Svenningsen, Sine Lo, Eisen, H., Sneppen, Kim & Brown, Stanley, 2003, In: Journal of Molecular Biology. 334, 3, p. 363-372 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Short-term kinetics of rRNA degradation in Escherichia coli upon starvation for carbon, amino acid, or phosphate
Fessler, M., Gummesson, Bertil, Charbon, Godefroid, Svenningsen, Sine Lo & Sørensen, Michael Askvad, 2020, In: Molecular Microbiology. 113, 5, p. 951-963 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Screening for Highly Transduced Genes in Staphylococcus aureus Revealed Both Lateral and Specialized Transduction
Bowring, Janine Zara, Su, Y., Alsaadi, Ahlam Musaibeh M, Svenningsen, Sine Lo, Parkhill, J. & Ingmer, Hanne, 2022, In: Microbiology Spectrum. 10, 1, e02423-21.Research output: Contribution to journal › Journal article › Research › peer-review
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Quorum sensing determines the choice of antiphage defense strategy in Vibrio anguillarum
Tan, D., Svenningsen, Sine Lo & Middelboe, Mathias, 2015, In: mBio. 6, 3, 10 p., e00627-15.Research output: Contribution to journal › Journal article › Research › peer-review
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Quantification of the abundance and charging levels of transfer RNAs in Escherichia coli
Stenum, T. S., Sørensen, Michael Askvad & Svenningsen, Sine Lo, 22 Aug 2017, In: Journal of Visualized Experiments. 126, e56212.Research output: Contribution to journal › Journal article › Research › peer-review
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Prevalent reliance of bacterioplankton on exogenous vitamin B1 and precursor availability
Paerl, R. W., Sundh, J., Tan, D., Svenningsen, Sine Lo, Hylander, S., Pinhassi, J., Andersson, A. F. & Riemann, Lasse, 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 44, p. E10447-E10456Research output: Contribution to journal › Journal article › Research › peer-review
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Polyamines are Required for tRNA Anticodon Modification in Escherichia coli
Winther, K. S., Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2021, In: Journal of Molecular Biology. 433, 15, 14 p., 167073.Research output: Contribution to journal › Journal article › Research › peer-review
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Phage defense mechanisms and their genomic and phenotypic implications in the fish pathogen Vibrio anguillarum
Castillo, D., Rørbo, N., Jørgensen, J., Lange, J., Tan, D., Kalatzis, Panagiotis, Svenningsen, Sine Lo & Middelboe, Mathias, 2019, In: FEMS Microbiology Ecology. 95, 3, fiz004.Research output: Contribution to journal › Journal article › Research › peer-review
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On the role of Cro in lambda prophage induction
Svenningsen, Sine Lo, Constantino, N., Court, D. L. & Adhya, S., 2005, In: Proceedings of the National Academy of Science of the United States of America. 102, 12, p. 4465-4469Research output: Contribution to journal › Journal article › Research › peer-review
Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi qourum-sensing response
Tu, K. C., Long, T., Svenningsen, Sine Lo, Wingreen, N. S. & Bassler, B. L., 26 Feb 2010, In: Molecular Cell. 37, 4, p. 567-579 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Interactions between the Prophage 919TP and Its Vibrio cholerae Host: Implications of gmd Mutation for Phage Resistance, Cell Auto-Aggregation, and Motility
Li, N., Zeng, Y., Hu, B., Zhu, T., Svenningsen, Sine Lo, Middelboe, Mathias & Tan, D., 2021, In: Viruses. 13, 12, 15 p., 2342.Research output: Contribution to journal › Journal article › Research › peer-review
How long can bacteriophage λ change its mind?
Semsey, S., Campion, C., Mohamed, A. & Svenningsen, Sine Lo, 16 Oct 2015, In: Bacteriophage. 5, 1, p. e1012930Research output: Contribution to journal › Journal article › Research › peer-review
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High cell densities favor lysogeny: induction of an H20 prophage is repressed by quorum sensing and enhances biofilm formation in Vibrio anguillarum
Tan, D., Hansen, Mads Frederik, de Carvalho, L. N., Røder, Henriette Lyng, Burmølle, Mette, Middelboe, Mathias & Svenningsen, Sine Lo, 2020, In: The ISME Journal. 14, 7, p. 1731-1742 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Gene dosage compensation calibrates four regulatory RNAs to control Vibrio cholerae quorum sensing
Svenningsen, Sine Lo, Tu, K. C. & Bassler, B. L., 2009, In: EMBO Journal. 28, 4, p. 429-39 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Existence of log-phase Escherichia coli persisters and lasting memory of a starvation pulse
Svenningsen, Mikkel Skjoldan, Svenningsen, Sine Lo, Sørensen, Michael Askvad & Mitarai, Namiko, 2022, In: Life Science Alliance. 5, 2, 9 p., e202101076.Research output: Contribution to journal › Journal article › Research › peer-review
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Effects of Four Different Regulatory Mechanisms on the Dynamics of Gene Regulatory Cascades
Hansen, S., Krishna, S., Semsey, S. & Svenningsen, Sine Lo, 17 Jul 2015, In: Scientific Reports. 5, 12186.Research output: Contribution to journal › Journal article › Research › peer-review
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Distinct Survival, Growth Lag, and rRNA Degradation Kinetics during Long-Term Starvation for Carbon or Phosphate
Himeoka, Y., Gummesson, Bertil, Sørensen, Michael Askvad, Svenningsen, Sine Lo & Mitarai, Namiko, 20 Apr 2022, In: mSphere. 7, 3, 12 p., e01006-21.Research output: Contribution to journal › Journal article › Research › peer-review
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Direct and indirect effects in the regulation of overlapping promoters
Bendtsen, K. M., Erdossy, J., Csiszovski, Z., Svenningsen, Sine Lo, Sneppen, Kim, Krishna, S. & Semsey, S., 2011, In: Nucleic Acids Research. 39, 16, p. 6879-6885 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Commitment to lysogeny is preceded by a prolonged period of sensitivity to the late lytic regulator Q in bacteriophage Λ
Svenningsen, Sine Lo & Semsey, S., 2014, In: Journal of Bacteriology. 196, 20, p. 3582-3588 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Big Impact of the Tiny: Bacteriophage–Bacteria Interactions in Biofilms
Hansen, Mads Frederik, Svenningsen, Sine Lo, Røder, Henriette Lyng, Middelboe, Mathias & Burmølle, Mette, 2019, In: Trends in Microbiology. 27, 9, p. 739-752 14 p.Research output: Contribution to journal › Review › Research › peer-review
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Beyond Cholera: Characterization of zot-Encoding Filamentous Phages in the Marine Fish Pathogen Vibrio anguillarum
Mauritzen, Jesper Juel, Castillo, D., Tan, D., Svenningsen, Sine Lo & Middelboe, Mathias, 2020, In: Viruses. 12, 7, 17 p., 730.Research output: Contribution to journal › Journal article › Research › peer-review
A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics inVibrio harveyi
Svenningsen, Sine Lo, 2008, In: Molecular Microbiology. 70, 4, p. 896-907 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics in Vibrio harveyi
Tu, K. C., Waters, C. M., Svenningsen, Sine Lo & Bassler, B. L., 2008, In: Molecular Microbiology. 70, 4, p. 896-907 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A quorum-sensing-induced bacteriophage defense mechanism
Høyland-Kroghsbo, Nina Molin, Mærkedahl, R. B. & Svenningsen, Sine Lo, 2013, In: mBio. 4, 1, p. 1-9 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
A negative feedback loop involving small RNAs accelerates Vibrio cholerae'stransition out of quorum-sensing mode
Svenningsen, Sine Lo, 2008, In: Genes & Development. 22, 2, p. 226-38 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode
Svenningsen, Sine Lo, Waters, C. M. & Bassler, B. L., 2008, In: Genes and Development. 22, 2, p. 226-238 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A growing microcolony can survive and support persistent propagation of virulent phages
Eriksen, R. S., Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 1 Jan 2018, In: Proceedings of the National Academy of Sciences USA (PNAS). 115, 2, p. 337-342Research output: Contribution to journal › Journal article › Research › peer-review
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In silico evolution of lysis-lysogeny strategies reproduces observed lysogeny propensities in temperate bacteriophages
Sinha, V., Goyal, A., Svenningsen, Sine Lo, Semsey, S. & Krishna, S., 26 Jul 2017, In: Frontiers in Microbiology. 8, 11 p., 1386.Research output: Contribution to journal › Journal article › Research › peer-review
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Escherichia coli protein synthesis is limited by mRNA availability rather than ribosomal capacity during phosphate starvation
Espinosa, R., Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2022, In: Frontiers in Microbiology. 13, 13 p., 989818.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 11223840
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Direct and indirect effects in the regulation of overlapping promoters
Research output: Contribution to journal › Journal article › Research › peer-review
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2145
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Single-cell Analysis of Lambda Immunity Regulation
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1918
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Research output: Contribution to journal › Journal article › Research › peer-review
Published