Dissection of Functional Domains of Orc1-2, the Archaeal Global DNA Damage-Responsive Regulator

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  • Xiaotong Liu
  • Mengmeng Sun
  • Ruyi Xu
  • Yulong Shen
  • Qihong Huang
  • Xu Feng
  • Qunxin She
Orc1-2 is a non-initiator ortholog of archaeal/eukaryotic Orc1 proteins, which functions as a global regulator in DNA damage-responsive (DDR) expression. As for Orc1 initiators, the DDR regulator harbors an AAA+ ATPase domain, an Initiator-Specific Motif (ISM) and a winged-helix (wH) DNA-binding domain, which are also organized in a similar fashion. To investigate how Orc1-2 mediates the DDR regulation, the orc1-2 mutants inactivating each of these functional domains were constructed with Saccharolobus islandicus and genetically characterized. We found that disruption of each functional domain completely abolished the DDR regulation in these orc1-2 mutants. Strikingly, inactivation of ATP hydrolysis of Orc1-2 rendered an inviable mutant. However, the cell lethality can be suppressed by the deficiency of the DNA binding in the same protein, and it occurs independent of any DNA damage signal. Mutant Orc1-2 proteins were then obtained and investigated for DNA-binding in vitro. This revealed that both the AAA+ ATPase and the wH domains are involved in DNA-binding, where ISM and R381R383 in wH are responsible for specific DNA binding. We further show that Orc1-2 regulation occurs in two distinct steps: (a) eliciting cell division inhibition at a low Orc1-2 content, and this regulation is switched on by ATP binding and turned off by ATP hydrolysis; any failure in turning off the regulation leads to growth inhibition and cell death; (b) activation of the expression of DDR gene encoding DNA repair proteins at an elevated level of Orc1-2.
OriginalsprogEngelsk
Artikelnummer14609
TidsskriftInternational Journal of Molecular Sciences
Vol/bind23
Udgave nummer23
Antal sider16
ISSN1661-6596
DOI
StatusUdgivet - 2022

Bibliografisk note

Funding Information:
This research was funded by National Key R & D Program of China, grant number 2020YFA0906800 to Q.S.; Danish Council for Independent Research (DFF-4181-00274) to Q.S.; and National Natural Science Foundation of China (32270040 to Q.S., 32001022 to X.F., and 31900055 to Q.H.). The APC was funded by National Key R & D Program of China, grant number 2020YFA0906800.

Publisher Copyright:
© 2022 by the authors.

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