Microbiology

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  1. Published

    Whole-genome shotgun sequencing of mitochondria from ancient hair shafts.

    Gilbert, M. T. P., Tomsho, L. P., Rendulic, S., Packard, M., Drautz, D. I., Sher, A., Tikhonov, A., Dalén, L., Kuznetsova, T., Kosintsev, P., Campos, P. F., Higham, T., Collins, M. J., Wilson, A. S., Shidlovskiy, F., Buigues, B., Ericson, P. G. P., Germonpré, M., Götherström, A., Iacumin, P. & 11 others, Nikolaev, V., Nowak-Kemp, M., Willerslev, Eske, Knight, J. R., Irzyk, G. P., Perbost, C. S., Fredrikson, K. M., Harkins, T. T., Sheridan, S., Miller, W. & Schuster, S. C., 2007, In: Science. 317, 5846, p. 1927-30 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    DNA extraction from dry museum beetles without conferring external morphological damage.

    Gilbert, M Thomas P, Moore, W., Melchior, L. & Worobey, M., 2007, In: PLoS ONE. 2, 3, p. e272

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Ancient mito-chondria DNA from hair

    Gilbert, M Thomas P, Wilson, A. S., Bunce, M., Hansen, Anders Johannes, Willerslev, Eske, Shapiro, B., Higham, T. F. G., Richards, M. P., O'Connell, T. C., Tobin, D. J., Janaway, R. C. & Cooper, A., 2004, In: Current Biology. 14, 12

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when?

    Gilbert, M Thomas P, Haselkorn, T., Bunce, M., Sanchez, J. J., Lucas, S. B., Jewell, L. D., Van Marck, E. & Worobey, M., 2007, In: PLoS ONE. 2, 6, p. e537

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    The emergence of HIV/AIDS in the Americas and beyond.

    Gilbert, M Thomas P, Rambaut, A., Wlasiuk, G., Spira, T. J., Pitchenik, A. E. & Worobey, M., 2007, In: Proceedings of the National Academy of Science of the United States of America. 104, 47, p. 18566-70 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Authenticity in ancient DNA studies.

    Gilbert, M Thomas P & Willerslev, Eske, 2006, In: Medicina nei Secoli. 18, 3, p. 701-23 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    DNA from Pre-Clovis Human Coprolites in Oregon, North America.

    Gilbert, M Thomas P, Jenkins, D. L., Götherstrom, A., Naveran, N., Sanchez, J. J., Hofreiter, M., Thomsen, P. F., Binladen, J., Higham, T. F. G., Yohe, R. M., Parr, R., Cummings, L. S. & Willerslev, Eske, 2008, In: Science. 320, 5877, p. 786 - 789

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Characterization of genetic miscoding lesions caused by postmortem damage

    Gilbert, M Thomas P, Hansen, Anders Johannes, Willerslev, Eske, Rudbeck, L., Barnes, I., Cooper, A. & Lynnerup, Niels, 2002, In: American Journal of Human Genetics. 72, 1, p. 48-61 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes

    Gilbert, M. T. P., Drautz, D. I., Lesk, A. M., Ho, S. Y. W., Qi, J., Ratan, A., Hsu, C-H., Sher, A., Dalén, L., Götherström, A., Tomsho, L. P., Rendulic, S., Packard, M., Campos, P. F., Kuznetsova, T. V., Shidlovskiy, F., Tikhonov, A., Willerslev, E., Iacumin, P., Buigues, B. & 13 others, Ericson, P. G. P., Germonpré, M., Kosintsev, P., Nikolaev, V., Nowak-Kemp, M., Knight, J. R., Irzyk, G. P., Perbost, C. S., Fredrikson, K. M., Harkins, T. T., Sheridan, S., Miller, W. & Schuster, S. C., 2008, In: Proceedings of the National Academy of Science of the United States of America. 105, 24, p. 8327-32 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis.

    Gilbert, M Thomas P, Binladen, J., Miller, W., Wiuf, C., Willerslev, Eske, Poinar, H., Carlson, J. E., Leebens-Mack, J. H. & Schuster, S. C., 2007, In: Nucleic Acids Research. 35, 1, p. 1-10 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Insights into the processes behind the contamination of degraded human teeth and bone samples with exogenous sources of DNA

    Gilbert, M Thomas P, Hansen, Anders Johannes, Willerslev, Eske, Turner-Walker, G. & Collins, M., 2006, In: International Journal of Osteoarchaeology. 16, 2, p. 156-164

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Biochemical and physical correlates of DNA contamination in archaeological human bones and teeth excavated at Matera, Italy

    Gilbert, M Thomas P, Rudbeck, L., Willerslev, Eske, Hansen, Anders Johannes, Smith, C., Penkman, K. E. H., Prangenberg, K., Nielsen-Marsh, C. M., Jans, M. E., Arthur, P., Lynnerup, Niels, Turner-Walker, G., Biddle, M., Kjolbye-Biddle, B. & Collins, M. J., 2005, In: Journal of Archaeological Science. 32, 5, p. 785-793

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Multiplex PCR with minisequencing as an effective high-throughput SNP typing method for formalin-fixed tissue.

    Gilbert, M Thomas P, Sanchez, J. J., Haselkorn, T., Jewell, L. D., Lucas, S. B., Van Marck, E., Børsting, Claus, Morling, Niels & Worobey, M., 2007, In: Electrophoresis. 28, 14, p. 2361-7 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Paleo-eskimo mtDNA genome reveals matrilineal discontinuity in Greenland

    Gilbert, M. T. P., Kivisild, T., Grønnow, B., Andersen, P. K., Metspalu, E., Reidla, M., Tamm, E., Axelsson, E., Götherström, A., Campos, P. F., Rasmussen, M., Metspalu, M., Higham, T. F. G., Schwenninger, J-L., Nathan, R., De Hoog, C-J., Koch, A., Møller, L. N., Andreasen, C., Meldgaard, M. & 3 others, Villems, R., Bendixen, C. & Willerslev, Eske, 2008, In: Science. 320, 5884, p. 1787-1789 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Response to Comment on "Whole-Genome Shotgun Sequencing of Mitochondria from Ancient Hair Shafts"

    Gilbert, M Thomas P, Miller, W. & Schuster, S. C., 2008, In: Science. 322, 5903, p. 857

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Microbial diversity in a permanently cold and alkaline environment in Greenland

    Glaring, M. A., Vester, J. K., Lylloff, J. E., Abu Al-Soud, W., Sørensen, Søren Johannes & Stougaard, P., 2015, In: PLoS ONE. 10, 4, 22 p., e0124863.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Cypris metamorphosis, injection and earliest internal development of theRrizocephalan Loxothylacus panopaei (Gissler). Crustacea: Cirripedia: Rhizocephala: Sacculinidae

    Glenner, Henrik, 2001, In: Journal of Morphology. 249, 1, p. 43-75 32 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The Phylogeny of Rhizocephalan Parasites of the Genus Heterosaccus Using Molecular and Larval Data (Cirripedia: Rhizocephala; Sacculinidae)

    Glenner, Henrik, Thomsen, P. F., Rybakov, A. V., Galil, B. S. & Høeg, Jens Thorvald, 2008, In: Israel Journal of Ecology and Evolution. 54, 2, p. 223-238 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Bayesian inference of the metazoan phylogeny: a combined molecular and morphological approach

    Glenner, Henrik, Hansen, Anders Johannes, Sørensen, Martin Vinther, Ronquist, F., Huelsenbeck, J. P. & Willerslev, Eske, 2004, In: Current Biology. 14, 18, p. 1644-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Induced metamorphosis in crustacean y-larvae: towards a solution to a 100-year-old riddle

    Glenner, Henrik, Høeg, Jens Thorvald, Grygier, M. J. & Fujita, Y., 2008, In: BMC Biology. 6, 21, p. 1-6 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Associational Resistance to Predation by Protists in a Mixed Species Biofilm

    Goh, Y. F., Røder, Henriette Lyng, Chan, S. H., Ismail, M. H., Madsen, Jonas Stenløkke, Lee, K. W. K., Sørensen, Søren Johannes, Givskov, Michael, Burmølle, Mette, Rice, S. A. & McDougald, D., 2023, In: Applied and Environmental Microbiology. 89, 2, 16 p., e0174122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Azo dying of α-keratin material improves microbial keratinase screening and standardization

    Gonzalo, M., Espersen, R., Al-Soud, W. A., Cristiano Falco, F., Hägglund, Per Mårten, Sørensen, Søren Johannes, Svensson, B. & Jacquiod, S., 2020, In: Microbial Biotechnology. 13, 4, p. 984-996

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    High frequencies of antibiotic resistance genes in infants' meconium and early fecal samples

    Gosalbes, M. J., Vallès, Y., Jiménez-Hernández, N., Balle, C., Riva, P., Miravet-Verde, S., de Vries, Lisbeth Elvira, Llop, S., Agersø, Y., Sørensen, Søren Johannes, Ballester, F. & Francino, M. P., 2016, In: Journal of Developmental Origins of Health and Disease. 7, 01, p. 35-44 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    I Skjoldungen spiste de især fisk og sæler

    Gotfredsen, Anne Birgitte, Nielsen, P. G. & Rosenlund, Knud, 1994, In: Tusaat. 1994, 1-2, p. 46-49

    Research output: Contribution to journal › Journal article › Research

  25. Published

    Pingaartumik aalisakkat puisillu nerisarsimavaat

    Gotfredsen, Anne Birgitte, Nielsen, P. G. & Rosenlund, Knud, 1994, In: Tusaat. 1994, 1-2, p. 50-55

    Research output: Contribution to journal › Journal article › Research

  26. Published

    Getting the best out of long-wavelength X-rays: de novo chlorine/sulfur SAD phasing of a structural protein from ATV

    Goulet, A., Vestergaard, G. A., Felisberto-Rodrigues, C., Campanacci, V., Garrett, Roger Antony, Cambillau, C. & Ortiz-Lombardía, M., 2010, In: Acta Crystallographica. Section D: Biological Crystallography. 66, Pt 3, p. 304-308 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicus

    Greve, B., Jensen, S., Phan, H., Brügger, K., Zillig, W., She, Q. & Garrett, Roger Antony, 2005, In: Archaea. 1, 5, p. 319-325

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Ecosystem response of pasture soil communities to fumigation-induced microbial diversity reductions: an examination of the biodiversity-ecosystem function relationship

    Griffiths, B. S., Ritz, K., Bardgett, R. D., Cook, R., Christensen, Søren, Ekelund, Flemming, Sørensen, Søren Johannes, Bååth, E., Bloem, J., De Ruiter, P. C., Dolfing, J. & Nicolardot, B., 2000, In: Oikos. 90, 2, p. 279-294

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Declare how you are limiting your environmental impact

    Grogan, P., Buckeridge, K. M. & Priemé, Anders, 2021, In: Nature. 596, 7870, p. 35 1 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  30. Published

    Comparative analysis of the alveolar microbiome in COPD, ECOPD, Sarcoidosis, and ILD patients to identify respiratory illnesses specific microbial signatures

    Gupta, S., Shariff, M., Chaturvedi, G., Sharma, A., Goel, N., Yadav, M., Mortensen, M. S., Sørensen, Søren Johannes, Mukerji, M. & Chauhan, N. S., 2021, In: Scientific Reports. 11, 11 p., 3963.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    The human microbiome: one step forward

    Gupta, S., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 120 p.

    Research output: Book/Report › Ph.D. thesis › Research

  32. Published

    Amplicon sequencing provides more accurate microbiome information in healthy children compared to culturing

    Gupta, S., Mortensen, M. S., Schjørring, S., Trivedi, Urvish, Vestergaard, G., Stokholm, Jakob, Bisgaard, H., Krogfelt, K. A. & Sørensen, Søren Johannes, 2019, In: Communications Biology. 2, p. 1-7 7 p., 291.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Environmental shaping of the bacterial and fungal community in infant bed dust and correlations with the airway microbiota

    Gupta, S., Hjelmsø, M. H., Lehtimäki, J., Li, Xuan Ji, Mortensen, M. S., Russel, J., Trivedi, Urvish, Rasmussen, Morten Arendt, Stokholm, Jakob, Bisgaard, H. & Sørensen, Søren Johannes, 2020, In: Microbiome. 8, 16 p., 115.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters

    Gülay, A., Musovic, S., Albrechtsen, H., Abu Al-Soud, W., Sørensen, Søren Johannes & Smets, B. F., 2016, In: The ISME Journal. 10, 9, p. 2209-2222 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    DNA-and RNA-SIP Reveal Nitrospira spp. as Key Drivers of Nitrification in Groundwater-Fed Biofilters

    Gülay, A., Fowler, S. J., Tatari, K., Thamdrup, B., Albrechtsen, H., Abu Al-Soud, W., Sørensen, Søren Johannes & Smets, B. F., 2019, In: mBio. 10, 6, 14 p., e01870-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Neonatal metabolome of caesarean section and risk of childhood asthma

    Gürdeniz, G., Ernst, M., Rago, D., Kim, M., Courraud, J., Stokholm, Jakob, Bønnelykke, Klaus, Björkbom, A., Trivedi, Urvish, Sørensen, Søren Johannes, Brix, Susanne, Hougaard, D., Rasmussen, Morten Arendt, Cohen, A. S., Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2022, In: The European Respiratory Journal. 59, 6, 11 p., 2102406.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Vaginal dysbiosis in pregnancy associates with risk of emergency caesarean section: a prospective cohort study

    Haahr, T., Clausen, Tine Dalsgaard, Thorsen, J., Rasmussen, Morten Arendt, Mortensen, M. S., Lehtimäki, J., Shah, S. A., Hjelmsø, M. H., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Vestergaard, G., Jacobsson, B., Larsson, P., Brix, S., Sørensen, Søren Johannes, Bisgaard, H. & Stokholm, Jakob, 2022, In: Clinical Microbiology and Infection. 28, 4, p. Pages 588-595

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Whole-genome sequence of Pseudomonas fluorescens EK007-RG4, a promising biocontrol agent against a broad range of bacteria, including the fire blight bacterium Erwinia amylovora

    Habibi, R., Tarighi, S., Behravan, J., Taheri, P., Kjøller, Annelise Helene, Brejnrod, A. D., Madsen, Jonas Stenløkke & Sørensen, Søren Johannes, 2017, In: Genome Announcements. 5, 13, 2 p., e00026-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Do environmental pharmaceuticals affect the composition of bacterial communities in a freshwater stream? A case study of the Knivsta river in the south of Sweden

    Hagberg, A., Gupta, S., Rzhepishevska, O., Fick, J., Burmølle, Mette & Ramstedt, M., 2021, In: Science of the Total Environment. 763, 10 p., 142991.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Ancient DNA reveals late survival of mammoth and horse in interior Alaska

    Haile, James Seymour, Froese, D. G., Macphee, R. D. E., Roberts, R. G., Arnold, L. J., Reyes, A. V., Rasmussen, M., Nielsen, Rasmus, Brook, B. W., Robinson, S., Demuro, M., Gilbert, M Thomas P, Munch, K., Austin, J. J., Cooper, A., Barnes, I., Möller, P. & Willerslev, Eske, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 52, p. 22352-7 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Interacting coherence resonance oscillators

    Han, S., Yim, T., Postnov, D. & Sosnovtseva, Olga, 30 Aug 1999, In: Physical Review Letters. 83, 9, p. 1771-1774

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Design of growth-dependent biosensors based on destabilized GFP for the detection of physiological behavior of Escherichia coli in heterogeneous bioreactors

    Han, S., Delvigne, F., Brognaux, A., Charbon, G. E. & Sørensen, Søren Johannes, 2013, In: Biotechnology Progress. 29, 2, p. 553-563 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Response of Escherichia coli to nutrient availability during cultivation at single cell level

    Han, S., 2013, Department of Biology, Faculty of Science, University of Copenhagen. 157 p.

    Research output: Book/Report › Ph.D. thesis › Research

  44. Published

    All equal, all different?

    Han, S., Lundin, L. & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  45. Published

    Construction of biosensors to investigate physiological diversity in fermentation processes

    Han, S., Lundin, L. & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  46. Published

    The serine protease Esperase HPF inhibits the formation of multispecies biofilm

    Hangler, M., Burmølle, Mette, Schneider, I., Allermann, K. & Jensen, B., 2009, In: Biofouling. 25, 7, p. 667-674 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Statistical evidence for miscoding lesions in ancient DNA templates

    Hansen, Anders Johannes, Willerslev, Eske, Wiuf, C., Mourier, T. & Arctander, P., 2001, In: Molecular Biology and Evolution. 18, 2, p. 262-65 4 p.

    Research output: Contribution to journal › Letter › Research

  48. Published

    Perspectives for DNA studies on polar ice cores

    Hansen, Anders Johannes & Willerslev, Eske, 2002, Patagonian Ice Fields: A Unique Natural Laboratory for Environmental and Climate Change Studies. Casassa, G., Sepúlveda, F. V. . & Sinclair, R. M. (eds.). New York: Kluwer Academic Publishers, (Series of the Centro de Estudios Científicos de Santiago).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  49. Published

    JAWS: Just Add Water System - A device for detection of nucleic acids in Martian ice caps: In: Proceedings of the First European Workshop on Exo-Astrobiology, 16 - 19 September 2002, Graz, Austria. Ed.: Huguette Lacoste. ESA SP-518, Noordwijk, Netherlands: ESA Publications Division, ISBN , 2002, p. 309 - 312

    Hansen, Anders Johannes, Willerslev, Eske, Mørk, S., Hedegaard, M. M., Rønn, R. & Jeffares, D. C., 2002, Proceedings of the Second European Workshop on Exo-Astrobiology. ESA Publications Division, Vol. SP-518.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  50. Published

    A maternal gluten-free diet reduces inflammation and diabetes incidence in the offspring of NOD mice

    Hansen, Camilla Hartmann Friis, Krych, Lukasz, Buschard, K., Metzdorff, S. B., Nellemann, C. L., Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Frøkiær, Hanne, Skov, Søren & Hansen, Axel Kornerup, 2014, In: Diabetes. 63, 8, p. 2821-2832 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Mode of delivery shapes gut colonization pattern and modulates regulatory immunity in mice

    Hansen, Camilla Hartmann Friis, Andersen, L. S. F., Krych, Lukasz, Metzdorff, S. B., Hasselby, Jane Preuss, Skov, Søren, Nielsen, Dennis Sandris, Buschard, K., Hansen, Lars Hestbjerg & Hansen, Axel Kornerup, 2014, In: Journal of Immunology. 193, 3, p. 1213-1222 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse

    Hansen, Camilla Hartmann Friis, Krych, Lukasz, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Buschard, K. & Hansen, Axel Kornerup, 2012, In: Diabetologia. 55, 8, p. 2285-2294 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    The role of GH receptor tyrosine phosphorylation in Stat5 activation

    Hansen, J. A., Hansen, Lars Hestbjerg, Wang, X., Kopchick, J. J., Gouilleux, F., Groner, B., Møldrup, A., Galsgaard, E. D., Nielsen, Jens Høiriis & Billestrup, Nils, Jun 1997, In: Journal of Molecular Endocrinology. 18, 3, p. 213-21 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Zackenberg Basic: The BioBasic programme

    Hansen, J., Hansen, Lars Hestbjerg, Tamstrof, M., Christoffersen, Kirsten Seestern, Jeppesen, E. & Schmidt, N. M., 2008, Zackenberg Ecological Research Operations, 13th Annual Report 2007: Danish Polar Center 2008, Danish Agency for Science, Technology and Innovation, Ministry of Science, Technology and Innovation. Klitgaard, A. B. & Rasch, M. (eds.). Copenhagen: Danish Polar Center, p. 57-69

    Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Communication

  55. Published

    Progressive introgression between Brassica napus (oilseed rape) and B. rapa

    Hansen, L. B., Siegismund, Hans Redlef & Jørgensen, R. B., 2003, In: Heredity. 91, 3, p. 276-83 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    The use of whole-cell biosensors to detect and quantify compounds or conditions affecting biological systems

    Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2001, In: Microbial Ecology. 42, 4, p. 483-494

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Introgression between oilseed rape (Brassica napus L.) and its weedy relative B. rapa L. in a natural population

    Hansen, L. B., Siegismund, Hans Redlef & Jørgensen, R. B., 2001, In: Genetic Resources and Crop Evolution. 48, 6, p. 621–627

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Design and Synthesis of a Quintessential Self-Transmissible IncX1 Plasmid, pX1.0

    Hansen, Lars Hestbjerg, Bentzon-Tilia, M., Bentzon-Tilia, S., Norman, A., Rafty, L. & Sørensen, Søren Johannes, May 2011, In: P L o S One. 6, 5, 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Chromosomal insertion of the entire Escherichia coli lactose operon, into two strains of Pseudomonas, using a modified mini-Tn5 delivery system

    Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Jensen, L. B., 1997, In: Gene. 186, 2, p. 167-173

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    The effect of the lacY gene on the induction of IPTG inducible promoters, studied in Escherichia coli and Pseudomonas fluorescens

    Hansen, Lars Hestbjerg, Knudsen, S. & Sørensen, Søren Johannes, 1998, In: Current Microbiology. 36, 6, p. 341-347

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Plasmid Encoded Multidrug Efflux Pump Conferring Resistance to Olaquindox in Escherichia coli

    Hansen, Lars Hestbjerg, Johannesen, E., Burmølle, Mette, Sørensen, A. H. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 9, p. 3332-3337

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Versatile biosensor vectors for detection and quantification of mercury

    Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2000, In: FEMS Microbiology Letters. 193, 1, p. 123-127

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Detection of Oxytetracycline production by Streptomyces rimosus in soil microcosms by combining whole-cell biosensors and flow cytometry

    Hansen, Lars Hestbjerg, Ferrari, B., Sørensen, A. H., Veal, D. & Sørensen, Søren Johannes, 2001, In: Applied and Environmental Microbiology. 67, 1, p. 239-244

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Detection and quantification of tetracyclines by whole cell biosensors

    Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2000, In: FEMS Microbiology Letters. 190, 2, p. 273-278

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Distinct gene expression profile of Xanthomonas retroflexus engaged in synergistic multispecies biofilm formation

    Hansen, L. B. S., Ren, D., Burmølle, Mette & Sørensen, Søren Johannes, 2017, In: The ISME Journal. 11, 1, p. 300-303 4 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  66. Published

    Exploring Microbial Communities; Composition, Interactions and Application: Bioinformatical Analysis of RNA and DNA

    Hansen, L. B. S., 2014, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  67. Published

    Fluidic resistance control enables high-throughput establishment of mixed-species biofilms

    Hansen, Mads Frederik, Meyer Torp, A., Madsen, Jonas Stenløkke, Røder, Henriette Lyng & Burmølle, Mette, 2019, In: BioTechniques. 66, 5, p. 235-239

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Big Impact of the Tiny: Bacteriophage–Bacteria Interactions in Biofilms

    Hansen, Mads Frederik, Svenningsen, Sine Lo, Røder, Henriette Lyng, Middelboe, Mathias & Burmølle, Mette, 2019, In: Trends in Microbiology. 27, 9, p. 739-752 14 p.

    Research output: Contribution to journal › Review › Research › peer-review

  69. Published

    Bacterial resistance to arsenic protects against protist killing

    Hao, X., Li, Xuan Ji, Pal, C., Hobman, J., Larsson, D. G. J., Saquib, Q., Alwathnani, H. A., Rosen, B. P., Zhu, Y. & Rensing, C., Apr 2017, In: BioMetals. 30, 2, p. 307-311 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    A role for copper in protozoan grazing - two billion years selecting for bacterial copper resistance

    Hao, X., Lüthje, F. L., Rønn, Regin, German, N. A., Li, Xuan Ji, Huang, F., Kisaka, J., Huffman, D., Alwathnani, H. A., Zhu, Y. & Rensing, C., 2016, In: Molecular Microbiology. 102, 4, p. 628-641 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Development of methane emission from lambs fed milk replacer and cream for a prolonged period

    Haque, M. N., Roggenbuck, M., Khanal, P., Nielsen, M. O. & Madsen, J., 2014, In: Animal Feed Science and Technology. 198, p. 38-48 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Local diversity of heathland Cercozoa explored by in-depth sequencing

    Harder, Christoffer Bugge, Rønn, Regin, Brejnrod, A. D., Bass, D., Abu Al-Soud, W. & Ekelund, Flemming, 2016, In: The ISME Journal. 10, 10, p. 2488-2497 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Transfusion-transmitted human immunodeficiency virus infection by a Danish blood donor with a very low viral load in the preseroconversion window phase

    Harritshøj, Lene Holm, Dickmeiss, E., Hansen, M. B., Ullum, H., Jørgensen, L. B. & Gerstoft, Jan, 2008, In: Transfusion. 48, 9, p. 2026-2028 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    EMBRACE-WATERS statement: Recommendations for reporting of studies on antimicrobial resistance in wastewater and related aquatic environments

    Hassoun-Kheir, N., Stabholz, Y., Kreft, J-U., de la Cruz, R., Dechesne, A., Smets, B. F., Romalde, J. L., Lema, A., Balboa, S., García-Riestra, C., Torres-Sangiao, E., Neuberger, A., Graham, D., Quintela-Baluja, M., Stekel, D. J., Graham, J., Pruden, A., Nesme, J., Sørensen, S. J., Hough, R. & 1 others, Paul, M., 2021, In: One Health. 13, 9 p., 100339.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Comparison of antibiotic-resistant bacteria and antibiotic resistance genes abundance in hospital and community wastewater: A systematic review

    Hassoun-Kheir, N., Stabholz, Y., Kreft, J., de la Cruz, R., Romalde, J. L., Nesme, Joseph, Sørensen, Søren Johannes, Smets, B. F., Graham, D. & Paul, M., 2020, In: Science of the Total Environment. 743, 11 p., 140804.

    Research output: Contribution to journal › Review › Research › peer-review

  76. Published

    Tolerance of Serpula lacrymans to copper-based wood preservatives

    Hastrup, A. C. S., Green, F., Clausen, C. A. & Jensen, B., 2005, In: International Biodeterioration & Biodegradation. 56, p. 173-177

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Biomimetic studies of wood decay: Simulating the effect of low molecular weight compounds and fungal enzymes

    Hastrup, A. C. S., Howell, C. & Jellison, J., 2007. 16 p.

    Research output: Contribution to conference › Poster › Research

  78. Published

    Hvor blev mit hus af? Historien om Ægte Hussvamp

    Hastrup, A. C. S., 2005, In: Svampe. p. 47-51 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Enzymatic oxalic acid regulation correlated with wood degradation in four brown-rot fungi

    Hastrup, A. C. S., Green, F., Lebow, P. K. & Jensen, B., 2012, In: International Biodeterioration and Biodegradation. 75, p. 109-114 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Serpula lacrymans, The Dry Rot Fungus and Tolerance Towards Copper-Based Wood Preservatives

    Hastrup, A. C. S., Jensen, B., Clausen, C. & Green III, F., 2005, Ikke angivet: 36th Annual Meeting. U. S. Forest Service. Tree Search; Washington, D.C., Vol. IRG/WP 05. p. 1-7

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  81. Published

    Non-enzymatic depolymerization of cotton cellulose by fungal mimicking metabolites

    Hastrup, A. C. S., Howell, C., Jensen, B. & Green, F., 2011, In: International Biodeterioration and Biodegradation. 65, 3, p. 553-559 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Camillea (Xylariaceae, Ascomycota), including two new species, along a trans-Andean altitude gradient in Ecuador

    Hastrup, A. C. S. & Læssøe, Thomas, 2009, In: Mycological Progress. 8, 4, p. 305-316 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Hussvamp og Skimmelsvamp: En uønsket gæst

    Hastrup, A. C. S., 2006, København, Denmark: KAB Fonden. 11 p.

    Research output: Book/Report › Report › Communication

  84. Published

    Detection of iron-chelating and iron-reducing compounds in four brown rot fungi

    Hastrup, A. C. S., Jensen, T. Ø. & Jensen, B., 2013, In: Holzforschung. 67, p. 99-106 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Fungal accumulation of metals from building materials during brown rot wood decay

    Hastrup, A. C. S., Jensen, B. & Jellison, J., 2014, In: Archives of Microbiology. 196, 8, p. 565-574 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Soil fungal community responses to global changes

    Haugwitz, M. S., 2013, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  87. Published

    The legacy of climate change effects: previous drought increases short-term litter decomposition rates in a temperate mixed grass- and shrubland

    Haugwitz, M. S., Michelsen, Anders & Priemé, Anders, 2016, In: Plant and Soil. 408, 1, p. 183-193 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Soil microorganisms respond to five years of climate change manipulations and elevated atmospheric CO2 in a temperate heath ecosystem

    Haugwitz, M. S., Bergmark, L., Priemé, Anders, Christensen, Søren, Beier, Claus & Michelsen, Anders, 2014, In: Plant and Soil. 374, 1-2, p. 211-222 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Long-term addition of fertilizer, labile carbon, and fungicide alters the biomass of plant functional groups in a subarctic-alpine community

    Haugwitz-Hardenberg-Reventlow, M. S. & Michelsen, Anders, 2011, In: Plant Ecology. 212, 4, p. 715-726 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Long-term microbial control of nutrient availability and plant biomass in a subarctic-alpine heath after addition of carbon, fertilizer and fungicide

    Haugwitz-Hardenberg-Reventlow, M. S., Michelsen, Anders & Schmidt, Inger Kappel, 2011, In: Soil Biology & Biochemistry. 43, 1, p. 179-187 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Draft genome sequence of the psychrophilic and alkaliphilic Rhodonellum psychrophilum strain GCM71T

    Hauptmann, A. L., Glaring, M. A., Hallin, P. F., Priemé, Anders & Stougaard, P., 2013, In: Genome Announcements. 1, 6, 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Soil bacterial community response to long-term land use conversion in Yellow River Delta

    He, H., Miao, Y., Gan, Y., Wei, S., Tan, S., Rask, K. A., Wang, L., Dai, J., Chen, W. & Ekelund, Flemming, 2020, In: Applied Soil Ecology. 156, 14 p., 103709.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Plasmids metagenomic: insight into their cryptic ecology

    He, Wanli, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 139 p.

    Research output: Book/Report › Ph.D. thesis › Research

  94. Published

    Quantification and fate of plasmid-specific bacteriophages in wastewater: Beyond the F-coliphages

    He, Z., Parra, B., Nesme, Joseph, Smets, B. F. & Dechesne, A., 2022, In: Water Research. 227, 8 p., 119320.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Evaluating Neanderthal genetics and phylogeny.

    Hebsgaard, M. B., Wiuf, C., Gilbert, M Thomas P, Glenner, Henrik & Willerslev, Eske, 2007, In: Journal of Molecular Evolution. 64, 1, p. 50-60 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Phylogeny of the true water bugs (Nepomorpha: Hemiptera–Heteroptera) based on 16S and 28S rDNA and morphology

    Hebsgaard, M. B., Andersen, N. M. & Damgaard, J., 2004, In: Systematic Entomology. 29, 4, p. 488-508

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Ancient DNA- Practical and theoretical issues

    Hebsgaard, M. B., 2008

    Research output: Book/Report › Ph.D. thesis › Research

  98. Published

    Very Old DNA

    Hebsgaard, M. B. & Willerslev, Eske, 2009, Permafrost Soils. Margesin, R. (ed.). Springer, Vol. 16. p. 47-59 (Soil Biology, Vol. 16).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  99. Published

    Geologically ancient DNA: fact or artefact?

    Hebsgaard, M. B., Phillips, M. J. & Willerslev, Eske, 2005, In: Trends in Microbiology. 13, 5, p. 212-220

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Phylogeny of the true water bugs (Nepomorpha: Hemiptera-Heteroptera) based on 16S and 28S and morphology

    Hebsgaard, M. B., Møller Andersen, N. & Damgaard, J., 2004, In: Systematic Entomology. 29, p. 488-508 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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