Microbiology

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  1. 2003
  2. Published

    The mycorrhizal fungus (Glomus intraradices) affects microbial activity in the rhizosphere of pea plants (Pisum sativum)

    Wamberg, C., Christensen, Søren, Jakobsen, I., Müller, A. K. & Sørensen, Søren Johannes, 2003, In: Soil Biology & Biochemistry. Vol. 35, issue 10, p. 1349-1357

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. 2004
  4. Published

    In Vivo Detection and Quantification of Tetracycline by Use of a Whole-Cell Biosensor in the Rat Intestine

    Bahl, M. I., Hansen, Lars Hestbjerg, Licht, T. R. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 4, p. 1112-1117

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Ancient mito-chondria DNA from hair

    Gilbert, M Thomas P, Wilson, A. S., Bunce, M., Hansen, Anders Johannes, Willerslev, Eske, Shapiro, B., Higham, T. F. G., Richards, M. P., O'Connell, T. C., Tobin, D. J., Janaway, R. C. & Cooper, A., 2004, In: Current Biology. 14, 12

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Application of whole-cell biosensors in soil

    Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Burmølle, Mette, Oregaard, G. & Hermansen, P., 2004, Molecular Microbial Ecology Manual. Kowalchuk, G. A., de Bruijn, F. J., Head, I. M., Akkermans, A. D. L. & van Elsas, J. D. (eds.). 2. ed ed. Kluwer Academic Publishers, p. 1613-1628 8.03

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  7. Published

    Bayesian inference of the metazoan phylogeny: a combined molecular and morphological approach

    Glenner, Henrik, Hansen, Anders Johannes, Sørensen, Martin Vinther, Ronquist, F., Huelsenbeck, J. P. & Willerslev, Eske, 2004, In: Current Biology. 14, 18, p. 1644-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Effect of Tetracycline on Transfer and Establishment of the Tetracycline-Inducible Conjugative Transposon Tn916 in the Guts of Gnotobiotic Rats

    Bahl, M. I., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Licht, T. R., 2004, In: Applied and Environmental Microbiology. 70, 2, p. 758-764

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Growth and molting in epizoic pedunculate barnacles genus Octolasmis (Crustacea: Thecostraca: Cirripedia: Thoracica).

    Høeg, Jens Thorvald, Glenner, Henrik & Høeg, Jens Thorvald, 2004, In: Journal of Morphology. 260, 2, p. 154-64 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Isolation of nucleic acids and cultures from fossil ice and permafrost

    Willerslev, Eske, Hansen, Anders Johannes & Poinar, H. N., 2004, In: Trends in Ecology & Evolution. 19, 3, p. 2004 Mar;19(3):141-7

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Long-term persistence of bacterial DNA

    Willerslev, Eske, Hansen, Anders Johannes, Ronn, R., Brand, T. B., Barnes, I., Wiuf, C., Gilichinsky, D., Mitchell, D. & Cooper, A., 2004, In: Current Biology. 14, 1, p. R9-10

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Molecular identification of mycorrhizal fungi in Neuwiedia veratrifolia (Orchidaceae)

    Kristiansen, K. A., Freudenstein, J. V., Rasmussen, Finn N. & Rasmussen, Hanne Nina, 2004, In: Molecular Phylogenetics and Evolution. 33, 2, p. 251-258 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Observation of high seasonal variation in community structure of denitrifying bacteria in arable soil receiving artificial fertilizer and cattle manure by determining T-RFLP of nir gene fragments

    Priemé, Anders & Wolsing, M., 2004, In: FEMS Microbiology Ecology. 48, 2, p. 261-271 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Phylogeny of the true water bugs (Nepomorpha: Hemiptera-Heteroptera) based on 16S and 28S and morphology

    Hebsgaard, M. B., Møller Andersen, N. & Damgaard, J., 2004, In: Systematic Entomology. 29, p. 488-508 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Phylogeny of the true water bugs (Nepomorpha: Hemiptera–Heteroptera) based on 16S and 28S rDNA and morphology

    Hebsgaard, M. B., Andersen, N. M. & Damgaard, J., 2004, In: Systematic Entomology. 29, 4, p. 488-508

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Plasmid Encoded Multidrug Efflux Pump Conferring Resistance to Olaquindox in Escherichia coli

    Hansen, Lars Hestbjerg, Johannesen, E., Burmølle, Mette, Sørensen, A. H. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 9, p. 3332-3337

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Quantification of plasmid loss in Escherichia coli cells by use of flow cytometry

    Bahl, M. I., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2004, In: FEMS Microbiology Letters. 232, 1, p. 45-49

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Rise and fall of the Beringian steppe bison

    Shapiro, B., Drummond, A. J., Rambaut, A., Wilson, M. C., Matheus, P. E., Sher, A. V., Pybus, O. G., Gilbert, M. T. P., Barnes, I., Binladen, J., Willerslev, E., Hansen, A. J., Baryshnikov, G. F., Burns, J. A., Davydov, S., Driver, J. C., Froese, D. G., Harington, C. R., Keddie, G., Kosintsev, P. & 7 others, Kunz, M. L., Martin, L. D., Stephenson, R. O., Storer, J., Tedford, R., Zimov, S. & Cooper, A., 2004, In: Science. 306, 5701, p. 1561-5

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Bacterial mitotic machineries

    Gerdes, K., Møller-Jensen, J., Ebersbach, G., Kruse, T., Nordström, K. & Charbon, G. E., 6 Feb 2004, In: Cell. 116, 3, p. 359-66 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Bacterial mitosis: partitioning protein ParA oscillates in spiral-shaped structures and positions plasmids at mid-cell

    Ebersbach, G., Gerdes, K. & Charbon, G. E., 1 Apr 2004, In: Molecular Microbiology. 52, 2, p. 385-98 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Analysis of cell-type-specific gene expression during mouse spermatogenesis

    Almstrup, Kristian, Nielsen, J. E., Hansen, M. A., Tanaka, M., Skakkebæk, Niels Erik & Leffers, H., Jun 2004, In: Biology of Reproduction. 70, 6, p. 1751-1761 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Identification of genes differentially expressed in testes containing carcinoma in situ

    Høi-Hansen, Christina Engel, Nielsen, J. E., Almstrup, Kristian, Hansen, M. A., Skakkebæk, Niels Erik, Rajpert-DeMeyts, E. & Leffers, H., Jun 2004, In: Molecular Human Reproduction. 10, 6, p. 423-431 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    A phase II study of a 3-day schedule with topotecan and cisplatin every three weeks in patients with previously in treated small cell lung cancer and extensive disease: Final results.

    Lassen, Ulrik Niels, Sorensen, M., Jensen, P., Langer, Seppo W., Jensen, B., Jeppesen, N., Rytter, C., Mellemgaard, A., Hansen, Oddur & Osterlind, K., 15 Jul 2004, In: Journal of Clinical Oncology. 22, 14, p. 667S-667S 1 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  24. 2005
  25. Published

    Liparis - Synonomy, phylogenetics, taxonomic notes

    Cribb, P. & Rasmussen, Finn N., 2005, Genera Orchidacearum vol. 4 (Part one). Pridgeon, A. M., Cribb, P. J., Chase, M. W. & Rasmussen, F. N. (eds.). Oxford: Oxford University Press, Vol. 4. p. 465-471 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  26. Published

    Serpula lacrymans, The Dry Rot Fungus and Tolerance Towards Copper-Based Wood Preservatives

    Hastrup, A. C. S., Jensen, B., Clausen, C. & Green III, F., 2005, Ikke angivet: 36th Annual Meeting. U. S. Forest Service. Tree Search; Washington, D.C., Vol. IRG/WP 05. p. 1-7

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  27. Published

    Stichorkis - Synonomy, taxonomic notes

    Cribb, P. & Rasmussen, Finn N., 2005, Genera Orchidacearum vol. 4 (Part one). Pridgeon, A. M., Cribb, P. J., Chase, M. W. & Rasmussen, F. N. (eds.). Oxford: Oxford University Press, Vol. 4. p. 483–487 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  28. Published

    A novel rudivirus, ARV1, of the hyperthermophilic archaeal genus Acidianus

    Vestergaard, G. A., Häring, M., Peng, Xu, Rachel, R., Garrett, Roger Antony & Prangishvili, D., 2005, In: Virology. 336, 1, p. 83-92 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Beringian paleoecology inferred from permafrost-preserved fungal DNA

    Lydolph, M. C., Jacobsen, J., Arctander, P., Gilbert, M Thomas P, Gilichinsky, D. A., Hansen, Anders Johannes, Willerslev, Eske & Lange, L., 2005, In: Applied and Environmental Microbiology. 71, 2, p. 1012-7 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Biochemical and physical correlates of DNA contamination in archaeological human bones and teeth excavated at Matera, Italy

    Gilbert, M Thomas P, Rudbeck, L., Willerslev, Eske, Hansen, Anders Johannes, Smith, C., Penkman, K. E. H., Prangenberg, K., Nielsen-Marsh, C. M., Jans, M. E., Arthur, P., Lynnerup, Niels, Turner-Walker, G., Biddle, M., Kjolbye-Biddle, B. & Collins, M. J., 2005, In: Journal of Archaeological Science. 32, 5, p. 785-793

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Construction of a ColD cda Promoter-Based SOS-Green Fluorescent Protein Whole-Cell Biosensor with Higher Sensitivity toward Genotoxic Compounds than Constructs Based on recA, umuDC, or sulA Promoters

    Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2005, In: Applied and Environmental Microbiology. 71, 5, p. 2338-2346

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Damage and repair of ancient DNA

    Mitchell, D., Willerslev, Eske & Hansen, Anders Johannes, 2005, In: Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 571, 1-2, p. 265-76 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Differentiation-dependent activation of the human intestinal alkaline phosphatase promoter by HNF-4 in intestinal cells.

    Olsen, L., Bressendorff, Simon, Troelsen, J. T. & Olsen, Jørgen, 2005, In: American Journal of Physiology: Gastrointestinal and Liver Physiology. 289, 2, p. G220-6

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Geologically ancient DNA: fact or artefact?

    Hebsgaard, M. B., Phillips, M. J. & Willerslev, Eske, 2005, In: Trends in Microbiology. 13, 5, p. 212-220

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Glossary

    Rasmussen, Finn N., 2005, Genera Orchidacearum. Pridgeon, A. M., Cribb, P., Chase, M. W. & Rasmussen, F. N. (eds.). Oxford: Oxford University Press, Vol. 4. p. 627-628

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  36. Published

    Hvor blev mit hus af? Historien om Ægte Hussvamp

    Hastrup, A. C. S., 2005, In: Svampe. p. 47-51 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Lower level relationships in the mushroom genus Cortinarius (Basidiomycota, Agaricales): A comparison of RPB1, RPB2, and ITS phylogenies

    Frøslev, Tobias Guldberg, Matheny, P. B. & Hibbett, D. S., 2005, In: Molecular Phylogenetics and Evolution. 37, 2, p. 602-618 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicus

    Greve, B., Jensen, S., Phan, H., Brügger, K., Zillig, W., She, Q. & Garrett, Roger Antony, 2005, In: Archaea. 1, 5, p. 319-325

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures

    Häring, M., Vestergaard, G. A., Brügger, K., Rachel, R., Garrett, Roger Antony & Prangishvili, D., 2005, In: Journal of Bacteriology. 187, 11, p. 3855-8 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The genome of the social amoeba Dictyostelium discoideum.

    Eichinger, L., Pachebat, J. A., Glöckner, G., Rajandream, M-A., Sucgang, R., Berriman, M., Song, J., Olsen, R., Szafranski, K., Xu, Q., Tunggal, B., Kummerfeld, S., Madera, M., Konfortov, B. A., Rivero, F., Bankier, A. T., Lehmann, R., Hamlin, N., Davies, R., Gaudet, P. & 77 others, Fey, P., Pilcher, K., Chen, G., Saunders, D., Sodergren, E., Davis, P., Kerhornou, A., Nie, X., Hall, N., Anjard, C., Hemphill, L., Bason, N., Farbrother, P., Desany, B., Just, E., Morio, T., Rost, R., Churcher, C., Cooper, J., Haydock, S., van Driessche, N., Cronin, A., Goodhead, I., Muzny, D., Mourier, T., Pain, A., Lu, M., Harper, D., Lindsay, R., Hauser, H., James, K., Quiles, M., Madan Babu, M., Saito, T., Buchrieser, C., Wardroper, A., Felder, M., Thangavelu, M., Johnson, D., Knights, A., Loulseged, H., Mungall, K., Oliver, K., Price, C., Quail, M. A., Urushihara, H., Hernandez, J., Rabbinowitsch, E., Steffen, D., Sanders, M., Ma, J., Kohara, Y., Sharp, S., Simmonds, M., Spiegler, S., Tivey, A., Sugano, S., White, B., Walker, D., Woodward, J., Winckler, T., Tanaka, Y., Shaulsky, G., Schleicher, M., Weinstock, G., Rosenthal, A., Cox, E. C., Chisholm, R. L., Gibbs, R., Loomis, W. F., Platzer, M., Kay, R. R., Williams, J., Dear, P. H., Noegel, A. A., Barrell, B. & Kuspa, A., 2005, In: Nature. 435, 7038, p. 43-57 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Tolerance of Serpula lacrymans to copper-based wood preservatives

    Hastrup, A. C. S., Green, F., Clausen, C. A. & Jensen, B., 2005, In: International Biodeterioration & Biodegradation. 56, p. 173-177

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Pseudomonas aeruginosa tolerance to tobramycin, hydrogen peroxide and polymorphonuclear leukocytes is quorum-sensing dependent

    Bjarnsholt, Thomas, Jensen, Peter Østrup, Burmølle, Mette, Hentzer, M., Haagensen, J. A. J., Hougen, H. P., Calum, H., Madsen, K. G., Moser, Claus Ernst, Molin, S., Høiby, Niels & Givskov, Michael, Feb 2005, In: Microbiology. 151, Pt 2, p. 373-83 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Partition-associated incompatibility caused by random assortment of pure plasmid clusters

    Ebersbach, G., Sherratt, D. J., Gerdes, K. & Charbon, G. E., 1 Jun 2005, In: Molecular Microbiology. 56, 6, p. 1430-40 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. 2006
  45. Published

    Rhodonellum psychrophilum gen. nov., sp. nov., a novel psychrophilic and alkaliphilic bacterium of the phylum Bacteroidetes isolated from Greenland

    Schmidt, M., Priemé, Anders & Stougaard, P., 2006, In: International Journal of Systematic and Evolutionary Microbiology. 56, p. 2887-2892 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    A hidden Markov model approach for determining expression from genomic tiling micro arrays

    Terkelsen, K. M., Gardner, P. P., Arctander, P. & Krogh, Anders, 2006, In: BMC Bioinformatics. 7, 239

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Assessing the fidelity of ancient DNA sequences amplified from nuclear genes

    Binladen, J., Wiuf, C. H., Gilbert, M Thomas P, Bunce, M., Barnett, R., Larson, G., Greenwood, A. D., Haile, James Seymour, Ho, S. Y. W., Hansen, Anders Johannes & Willerslev, Eske, 2006, In: Genetics. 172, 2, p. 733-41

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Authenticity in ancient DNA studies.

    Gilbert, M Thomas P & Willerslev, Eske, 2006, In: Medicina nei Secoli. 18, 3, p. 701-23 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Automatic generation of gene finders for eukaryotic species

    Terkelsen, K. M. & Krogh, Anders, 2006, In: BMC Bioinformatics. 7, 263

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Bacterial diversity in permanently cold and alkaline ikaite columns from Greenland

    Schmidt, M., Priemé, Anders & Stougaard, P., 2006, In: Extremophiles. 10, 6, p. 551-562 12 p.

    Research output: Contribution to journal › Journal article › Research

  51. Published

    Balsaminaceae

    Rasmussen, Finn N., 2006, Dansk flora. Frederiksen, S., Rasmussen, F. N. & Seberg, O. (eds.). København: Gyldendal, p. 462-463 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education

  52. Published

    Cultivation-independent examination of horizontal transfer and host range of an IncP-1 plasmid among gram-positive and gram-negative bacteria indigenous to the barley rhizosphere

    Musovic, S., Oregaard, G., Kroer, Niels & Sørensen, Søren Johannes, 2006, In: Applied and Environmental Microbiology. 72, 10, p. 6687-6692 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Dansk flora

    Frederiksen, S. E. (ed.), Rasmussen, Finn N. (ed.) & Seberg, Ole (ed.), 2006, København: Gyldendal. 701 p.

    Research output: Book/Report › Book › Research

  54. Published

    Dependence among sites in RNA evolution.

    Yu, J. & Thorne, J. L., 2006, In: Molecular Biology and Evolution. 23, 8, p. 1525-37 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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