- Published
The effect of the lacY gene on the induction of IPTG inducible promoters, studied in Escherichia coli and Pseudomonas fluorescens
Hansen, Lars Hestbjerg, Knudsen, S. & Sørensen, Søren Johannes, 1998, In: Current Microbiology. 36, 6, p. 341-347Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of early probiotic exposure on the preterm infant gut microbiome development
Hui, Y., Smith, Birgitte, Mortensen, M. S., Krych, Lukasz, Sørensen, Søren Johannes, Greisen, Gorm, Krogfelt, K. A. & Nielsen, Dennis Sandris, 2021, In: Gut Microbes. 13, 1, 15 p., 1951113.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of ancient DNA damage on inferences of demographic histories
Axelsson, E., Willerslev, Eske, Gilbert, M Thomas P & Nielsen, Rasmus, 2008, In: Molecular Biology and Evolution. 25, 10, p. 2181-7 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of acetate on population heterogeneity in different cellular characteristics of Escherichia coli in aerobic batch cultures
Heins, A., Lundin, L., Nunes, I., Gernaey, K. V., Sørensen, Søren Johannes & Eliasson Lantz, A., 2019, In: Biotechnology Progress. 35, 3, e2796.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of Lactobacillus paracasei subsp. paracasei L. casei W8® on blood levels of triacylglycerol is independent of colonisation
Bjerg, A. T., Sørensen, M. B., Krych, Lukasz, Hansen, Lars Hestbjerg, Astrup, A., Kristensen, M. B. & Nielsen, Dennis Sandris, 2015, In: Beneficial Microbes. 6, 3, p. 263-269 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The developing hypopharyngeal microbiota in early life
Mortensen, M. S., Brejnrod, A. D., Roggenbuck, M., Abu Al-Soud, W., Balle, C., Krogfelt, K. A., Stokholm, Jakob, Thorsen, Jonathan Jan Ilve, Waage, J. E., Rasmussen, Morten Arendt, Bisgaard, H. & Sørensen, Søren Johannes, 2016, In: Microbiome. 4, 12 p., 70.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The developing airway and gut microbiota in early life is influenced by age of older siblings
Christensen, E. D., Hjelmsø, M. H., Thorsen, Jonathan Jan Ilve, Shah, S., Redgwell, T., Poulsen, Christina Egeø, Trivedi, Urvish, Russel, J., Gupta, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes, Rasmussen, Morten Arendt, Bisgaard, H. & Stokholm, Jakob, 2022, In: Microbiome. 10, 15 p., 106.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The complete genome of 2,6-dichlorobenzamide (BAM) degrader Aminobacter sp. MSH1 suggests a polyploid chromosome, phylogenetic reassignment, and functions of plasmids
Nielsen, Tue Kjærgaard, Horemans, B., Lood, C., T’Syen, J., van Noort, V., Lavigne, R., Ellegaard-Jensen, L., Hylling, Ole, Aamand, J., Springael, D. & Hansen, Lars Hestbjerg, 2021, In: Scientific Reports. 11, 12 p., 18943.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The biofilm life cycle: expanding the conceptual model of biofilm formation
Sauer, K., Stoodley, P., Goeres, D. M., Hall-Stoodley, L., Burmølle, Mette, Stewart, P. S. & Bjarnsholt, Thomas, 2022, In: Nature Reviews Microbiology. 20, 10, p. 608-620 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
The bacterial microbiota in first-void urine from men with and without idiopathic urethritis
Frølund, M., Wikström, A., Lidbrink, P., Abu Al-Soud, W., Larsen, N., Harder, C. B., Sørensen, Søren Johannes, Jensen, J. S. & Ahrens, P., 2018, In: PLoS ONE. 13, 7, p. 1-19 e0201380.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria
Thorsen, Jonathan Jan Ilve, Li, Xuan Ji, Peng, Shuang, Sunde, R. B., Shah, S. A., Bhattacharyya, M., Poulsen, C. S., Poulsen, Christina Egeø, Leal Rodriguez, C., Widdowson, Michael Lawrence, Neumann, A. U., Trivedi, Urvish, Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Nature Communications. 14, 12 p., 6668.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The ability of soil bacteria to receive the conjugative IncP1 plasmid, pKJK10, is different in a mixed community compared to single strains
de la Cruz Perera, C. I., Ren, D., Blanchet, M., Dendooven, L., Marsch, R., Sørensen, Søren Johannes & Burmølle, Mette, 2013, In: F E M S Microbiology Letters. 338, 1, p. 95-100 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Wastewater Plasmidome and its Derived Resistome: Insight Into Their Dynamics in the Urban Water Systems
Yu, Z., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 196 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The T-shirt microbiome is distinct between individuals and shaped by washing and fabric type
Sterndorff, E. B., Russel, J., Jakobsen, J., Mortensen, M. S., Gori, K., Herschend, J. & Burmølle, Mette, 2020, In: Environmental Research. 185, 9 p., 109449.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Soil Mobilome: A Direct Approach to Study Plasmid Functional Responses to Long-Term Copper Contamination
Luo, W., 2015, Department of Biology, Faculty of Science, University of Copenhagen. 166 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The Phylogeny of Rhizocephalan Parasites of the Genus Heterosaccus Using Molecular and Larval Data (Cirripedia: Rhizocephala; Sacculinidae)
Glenner, Henrik, Thomsen, P. F., Rybakov, A. V., Galil, B. S. & Høeg, Jens Thorvald, 2008, In: Israel Journal of Ecology and Evolution. 54, 2, p. 223-238 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Human Microbiota in Early Life: Initial Colonization and Development
Mortensen, M. S., 2016, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
The Genome of BAM-degrading Aminobacter sp. MSH1 with Several Low Copy Plasmids
Nielsen, Tue Kjærgaard, Hylling, Ole & Ellegaard-Jensen, L., 2018, 12 p.Research output: Working paper › Preprint › Research
- Published
The Effect of Long Term Mercury Pollution on the Soil Microbial Community
Müller, A. K., Westergaard, K., Christensen, Søren & Sørensen, Søren Johannes, 2001, In: FEMS Microbiology Ecology. 36, 1, p. 11-19Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Effect of Lean-Seafood and Non-Seafood Diets on Fecal Metabolites and Gut Microbiome: Results from a Randomized Crossover Intervention Study
Schmedes, M., Brejnrod, A. D., Aadland, E. K., Kiilerich, P., Kristiansen, Karsten, Jacques, H., Lavigne, C., Graff, I. E., Eng, Ø., Holthe, A., Mellgren, G., Young, J. F., Sundekilde, U. K., Liaset, B. & Bertram, H. C., 2019, In: Molecular Nutrition and Food Research. 63, 1, p. 1-8 1700976.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Diversity of pollinium stalks in Orchidaceae
Rasmussen, Finn N., 1982. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
The Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Field Trial
Li, L., Bergmark, L., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
The DNA methylome of human peripheral blood mononuclear cells
Li, Y., Zhu, J., Tian, G., Li, N., Li, Q., Ye, M., Zheng, H., Yu, J., Wu, H., Sun, J., Zhang, H., Chen, Q., Luo, R., Chen, M., He, Y., Jin, X., Zhang, Q., Yu, C., Zhou, G., Sun, J. & 17 others, , 1 Jan 2010, In: PLoS - Biology. 8, 11, p. e1000533-e1000533Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Clades of Orchidales
Rasmussen, Finn N., 1982. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
The Characterization and Manipulation of the Reticulated Microbiome in Vertebrates
Roggenbuck, M., 2014, Department of Biology, Faculty of Science, University of Copenhagen. 192 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The Biological Time Machine - Biological responses to multiple environmental and climatic changes: Environment and Stress, Ph.d. symposium at KVL October 2006
Albert, K., Ro-Poulsen, Helge, N. Mikkelsen, T., Michelsen, Anders, Beier, C., Jonasson, S. E., Ambus, Per Lennart, Schmidt, Inger Kappel, Holmstrup, M., Priemé, Anders & Christensen, Søren, 2006.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
The Airway Microbiota Modulates Effect of Azithromycin Treatment for Episodes of Recurrent Asthma-like Symptoms in Preschool Children: A Randomized Clinical Trial
Thorsen, Jonathan Jan Ilve, Stokholm, Jakob, Rasmussen, Morten Arendt, Mortensen, M. S., Brejnrod, A. D., Hjelmsø, M., Shah, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes & Bisgaard, H., 2021, In: American Journal of Respiratory and Critical Care Medicine. 204, 2, p. 149-158Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Testing for spatial clustering of amino acid replacements within protein tertiary structure.
Yu, J. & Thorne, J. L., 2006, In: Journal of Molecular Evolution. 62, 6, p. 682-92 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temporal trends in N2O flux dynamics in a Danish wetland – effects of plant-mediated gas transport of N2O and O2 following changes in water level and soil mineral-N availability
Jørgensen, C. J., Struwe, Sten & Elberling, Bo, 2012, In: Global Change Biology. 18, 1, p. 210-222 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temporal oral microbiome changes with brushing in children with cleft lip and palate
Rodrigues, R., Chung, A. P., Mortensen, M. S., Fernandes, M. H., Monteiro, A. B., Furfuro, R., Silva, C. C., Manso, M. C., Sørensen, Søren Johannes & Morais, P. V., 2021, In: Heliyon. 7, 9 p., e06513.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temporal changes in wood crystalline cellulose during degradation by brown rot fungi
Howell, C., Hastrup, A. C. S., Goodell, B. & Jellison, J., 2009, In: International Biodeterioration and Biodegradation. 63, 4, p. 414-419Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Taxonomy and the ontogeny of orchid pollinaria
Rasmussen, Finn N., 1987. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Tailings microbial community profile and prediction of its functionality in basins of tungsten mine
Chung, A. P., Coimbra, C., Farias, P., Francisco, R., Branco, R., Simão, F. V., Gomes, E., Pereira, A., Vila, M. C., Fiúza, A., Mortensen, M. S., Sørensen, Søren Johannes & Morais, P. V., 2019, In: Scientific Reports. 9, 13 p., 19596.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic interactions in multispecies biofilm combinations of bacterial isolates recovered from diverse food processing industries
Sadiq, F. A., De Reu, K., Burmølle, Mette, Maes, S. & Heyndrickx, M., 2023, In: Frontiers in Microbiology. 14, 13 p., 1159434.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic Removal of Static and Dynamic Staphylococcus aureus Biofilms by Combined Treatment with a Bacteriophage Endolysin and a Polysaccharide Depolymerase
Olsen, N. M. C., Thiran, E., Hasler, T., Vanzieleghem, T., Belibasakis, G. N., Mahillon, J., Loessner, M. J. & Schmelcher, M., 2018, In: Viruses. 10, 8, p. 1-17 438.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic Interactions within a Multispecies Biofilm Enhance Individual Species Protection against Grazing by a Pelagic Protozoan
Raghupathi, P. K., Liu, W., Sabbe, K., Houf, K., Burmølle, Mette & Sørensen, Søren Johannes, 2018, In: Frontiers in Microbiology. 8, 11 p., 2649.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergistic Interactions in Multispecies Biofilms
Ren, D., 2014, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Synergistic Interactions in Microbial Biofilms Facilitate the Establishment of Opportunistic Pathogenic Fungi in Household Dishwashers
Zupancic, J., Raghupathi, P. K., Houf, K., Burmølle, Mette, Sørensen, Søren Johannes & Gunde-Cimerman, N., 2018, In: Frontiers in Microbiology. 9, 13 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synbiotic Lactobacillus acidophilus NCFM and cellobiose does not affect human gut bacterial diversity but increases abundance of lactobacilli, bifidobacteria and branched-chain fatty acids: a randomized, double-blinded cross-over trial
van Zanten, G. C., Krych, Lukasz, Röytiö, H., Forssten, S., Lahtinen, S. J., Abu Al-Soud, W., Sørensen, Søren Johannes, Svensson, B., Jespersen, Lene & Jakobsen, M., 2014, In: F E M S Microbiology Ecology. 90, 1, p. 225-236 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Svampe og orkideer i reagensglas
Rasmussen, Hanne Nina, Andersen, T. F. & Johansen, B. B., 1987, In: Naturens Verden. 4, p. 127-136Research output: Contribution to journal › Journal article › Communication
- Published
Supraglacial bacterial community structures vary across the Greenland ice sheet
Cameron, K. A., Stibal, M., Zarsky, J. D., Gözdereliler, E., Schostag, M. D. & Jacobsen, C. S., 2016, In: F E M S Microbiology Ecology. 92, 2, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Supplerende noter til Kormofyternes Taxonomi: Angiospermae
Dahlgren, R., Frederiksen, S., Friis, Ib & Rasmussen, Finn N., 1990, 2. ed. Botanisk Laboratorium, Københavns Universitet. 70 p.Research output: Book/Report › Compendium/lecture notes › Education
- Published
Stygiolobus rod-shaped virus and the interplay of crenarchaeal rudiviruses with the CRISPR antiviral system
Vestergaard, G. A., Shah, S. A., Bize, A., Reitberger, W., Reuter, M., Phan, H., Briegel, A., Rachel, R., Garrett, Roger Antony & Prangishvili, D., 2008, In: Journal of Bacteriology. 190, 20, p. 6837-6845 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Studying bacterial multispecies biofilms: where to start?
Røder, Henriette Lyng, Sørensen, Søren Johannes & Burmølle, Mette, 2016, In: Trends in Microbiology. 24, 6, p. 503-513 11 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Structure of the acidianus filamentous virus 3 and comparative genomics of related archaeal lipothrixviruses
Vestergaard, G. A., Aramayo, R., Basta, T., Häring, M., Peng, Xu, Brügger, K., Chen, L., Rachel, R., Boisset, N., Garrett, Roger Antony & Prangishvili, D., 2008, In: Journal of Virology. 82, 1, p. 371-381 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure of a plant-pollinator network on a pahoehoe lava desert of the Galápagos Islands
Philipp, M., Bøcher, J. J., Siegismund, Hans Redlef & Nielsen, Lene Rostgaard, 2006, In: Ecography. 29, 4, p. 531-540 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure of African elephant populations
Siegismund, Hans Redlef & Arctander, P., 1996, In: Journal of Heredity. 86, 6, p. 467-9 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures
Häring, M., Vestergaard, G. A., Brügger, K., Rachel, R., Garrett, Roger Antony & Prangishvili, D., 2005, In: Journal of Bacteriology. 187, 11, p. 3855-8 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural and genomic properties of the hyperthermophilic archaeal virus ATV with an extracellular stage of the reproductive cycle
Prangishvili, D., Vestergaard, G. A., Häring, M., Aramayo, R., Basta, T., Rachel, R. & Garrett, Roger Antony, 2006, In: Journal of Molecular Biology. 359, 5, p. 1203-1216 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Storkenæbfamilien, Geraniaceae
Rasmussen, Finn N., 2006, Dansk flora. Frederiksen, S., Rasmussen, F. N. & Seberg, O. (eds.). 1. ed. København: Gyldendal, p. 318–322 5 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education
- Published
Stochastic synchronization of coupled coherence resonance oscillators
Postnov, D. E., Sosnovtseva, Olga, Han, S. & Yim, T., Nov 2000, In: International Journal of Bifurcation and Chaos in Applied Sciences and Engineering. 10, 11, p. 2541-2550Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Statistical evidence for miscoding lesions in ancient DNA templates
Hansen, Anders Johannes, Willerslev, Eske, Wiuf, C., Mourier, T. & Arctander, P., 2001, In: Molecular Biology and Evolution. 18, 2, p. 262-65 4 p.Research output: Contribution to journal › Letter › Research
- Published
Statistical analysis of post mortem DNA damage-derived miscoding lesions in Neandertal mitochondrial DNA
Vives, S., Gilbert, M Thomas P, Arenas, C., Gigli, E., Lao, O. & Lalueza-Fox, C., 2008, In: BMC Research Notes. 1, p. 40Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stable isotope and DNA evidence for ritual sequences in Inca child sacrifice.
Wilson, A. S., Taylor, T., Ceruti, M. C., Chavez, J. A., Reinhard, J., Grimes, V., Meier-Augenstein, W., Cartmell, L., Stern, B., Richards, M. P., Worobey, M., Barnes, I. & Gilbert, M Thomas P, 2007, In: Proceedings of the National Academy of Science of the United States of America. 104, 42, p. 16456-61 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stability and resilience of the intestinal microbiota in children in daycare - a 12 month cohort study
Mortensen, M. S., Jensen, Betina Hebbelstrup, Williams, J., Brejnrod, A. D., Andersen, L. O., Röser, D., Andreassen, B. U., Petersen, Andreas Munk, Stensvold, C. R., Sørensen, Søren Johannes & Krogfelt, K. A., 2018, In: BMC Microbiology. 18, 11 p., 223.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specificity and stability of the Acromyrmex–Pseudonocardia symbiosis
Andersen, Sandra Breum, Hansen, Lars Hestbjerg, Sapountzis, P., Sørensen, Søren Johannes & Boomsma, Jacobus J., 2013, In: Molecular Ecology. 22, 16, p. 4307-4321 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specialized microbiomes facilitate natural rhizosphere microbiome interactions counteracting high salinity stress in plants
Santos, S. S., Rask, K. A., Vestergård, M., Johansen, Jesper Liengaard, Priemé, Anders, Frøslev, Tobias Guldberg, González, A. M. M., He, H. & Ekelund, Flemming, 2021, In: Environmental and Experimental Botany. 186, 12 p., 104430.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial-temporal variations of nitrous oxide emissions in coffee agroforestry systems in Costa Rica
Bentzon-Tarp, A., Helgadóttir, D., Van den Meersche, K., Gay, F., Priemé, Anders, Roupsard, O., Mages, C. & Elberling, Bo, 2023, In: Agriculture, Ecosystems and Environment. 343, 11 p., 108257.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial variability of CH4 uptake in a Danish forest soil and its relation to different measurement techniques.
Priemé, Anders, 1996, In: Atmospheric Environment. 30, p. 1375-1379 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial variability in CH4 uptake in a danish forest soil and its relation to different managements techniques
Priemé, Anders, Christensen, Søren, Galle, B., Klemedtsson, L. & Griffin, D. W. T., 1996, In: Atmospheric Environment. 30, p. 1375-1379Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial analysis of the root system coupled to microbial community inoculation shed light on rhizosphere bacterial community assembly
Wei, S., Jacquiod, S., Philippot, L., Blouin, M. & Sørensen, Søren Johannes, 2021, In: Biology and Fertility of Soils. 57, 7, p. 973-989 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil texture is a stronger driver of the maize rhizosphere microbiome and extracellular enzyme activities than soil depth or the presence of root hairs
Yim, B., Ibrahim, Z., Rüger, L., Ganther, M., Maccario, Lorrie, Sørensen, Søren Johannes, Heintz-Buschart, A., Tarkka, M. T., Vetterlein, D., Bonkowski, M., Blagodatskaya, E. & Smalla, K., 2022, In: Plant and Soil. 478, 1-2, p. 229-251 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil recovery after removal of the N2-fixing invasive Acacia longifolia: consequences for ecosystem restoration
Marchante, E., Kjøller, Annelise Helene, Struwe, Sten & Freitas, H., 2009, In: Biological Invasions. 11, 4, p. 813-823 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil microorganisms respond to five years of climate change manipulations and elevated atmospheric CO2 in a temperate heath ecosystem
Haugwitz, M. S., Bergmark, L., Priemé, Anders, Christensen, Søren, Beier, Claus & Michelsen, Anders, 2014, In: Plant and Soil. 374, 1-2, p. 211-222 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil microorganisms decrease barley biomass uniformly across contrasting nitrogen availability
Munkager, V., Altenburger, A., Priemé, Anders, Bang-Andreasen, T., Rønn, Regin, Vestergård, M. & Ekelund, Flemming, 2021, In: European Journal of Soil Biology. 104, 9 p., 103311.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil microbial legacies differ following drying-rewetting and freezing-thawing cycles
Meisner, A., Snoek, B. L., Nesme, Joseph, Dent, E., Jacquiod, S., Classen, A. T. & Priemé, Anders, 2021, In: The ISME Journal. 15, 4, p. 1207-1221 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil microbial activity in dune ecosystems in Portugal invaded by Acacia longifolia
Marchante, E., Kjøller, A., Struwe, Sten & Freitas, H., 2008, Plant invasions: Human perception, ecological impacts and management. Tokarska-Guzik, B., Brock, J. H., Brundu, G., Child, L., Daehler, C. C. & Pysec, P. (eds.). Springer Publishing Company, p. 249-259 11 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Soil fungal community responses to global changes
Haugwitz, M. S., 2013, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Soil bacterial community responses to global changes
Bergmark, L., 2013, Department of Biology, Faculty of Science, University of Copenhagen. 167 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Soil bacterial community response to long-term land use conversion in Yellow River Delta
He, H., Miao, Y., Gan, Y., Wei, S., Tan, S., Rask, K. A., Wang, L., Dai, J., Chen, W. & Ekelund, Flemming, 2020, In: Applied Soil Ecology. 156, 14 p., 103709.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil bacteria show different tolerance ranges to an unprecedented disturbance
Nunes, I. M., Jurburg, S., Jacquiod, S. J. A., Brejnrod, A. D., Falcão Salles, J., Priemé, Anders & Sørensen, Søren Johannes, Feb 2018, In: Biology and Fertility of Soils. 54, 2, p. 189–202 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil amendment with sewage sludge affects soil prokaryotic community composition, mobilome and resistome
Wolters, B., Fornefeld, E., Jechalke, S., Su, J., Zhu, Y., Sørensen, Søren Johannes, Smalla, K. & Jacquiod, S., 2019, In: F E M S Microbiology Reviews. 95, 1, p. 1-14 fiy193.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil DNA extraction procedure influences protist 18S rRNA gene community profiling outcome
Santos, S. S., Nunes, I. M., Nielsen, Tue Kjærgaard, Jacquiod, S. J. A., Hansen, L. H. & Winding, A., Jul 2017, In: Protist. 168, 3, p. 283-293 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sociomicrobiology: Bacterial Interactions and Biofilm Formation
Madsen, Jonas Stenløkke, 2014, Department of Biology, Faculty of Science, University of Copenhagen. 165 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Social dynamics & adaptive strategies of microbes
Trivedi, Urvish, 2017, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Snow microbiome functional analyses reveal novel aspects of microbial metabolism of complex organic compounds
Zhu, C., Miller, M., Lusskin, N., Bergk Pinto, B., Maccario, Lorrie, Häggblom, M., Vogel, T., Larose, C. & Bromberg, Y., 2020, In: MicrobiologyOpen. 9, 9, e1100.Research output: Contribution to journal › Journal article › Research › peer-review
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Simultaneous pyrosequencing of the 16S rRNA, IncP-1 trfA, and merA genes
Holmsgaard, P. N., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2013, In: Journal of Microbiological Methods. 95, 2, p. 280-284 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Similar sponge-associated bacteria can be acquired via both vertical and horizontal transmission
Sipkema, D., de Caralt, S., Morillo, J. A., Abu Al-Soud, W., Sørensen, Søren Johannes, Smidt, H. & Uriz, M. J., 2015, In: Environmental Microbiology. 17, 10, p. 3807-3821 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Short- and longterm impacts of Acacia longifolia invasion on belowground processes of a Mediterranean coastal dune ecosystem
Marchante, E., Kjøller, A., Struwe, Sten & Freitas, H., 2008, In: Agriculture, Ecosystems & Environment. Applied Soil Ecology. 40, 2, p. 210-217 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial
Wei, S., Mortensen, M. S., Stokholm, Jakob, Brejnrod, A. D., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Trivedi, Urvish, Bisgaard, H. & Sørensen, Søren Johannes, 2018, In: EBioMedicine. 38, p. 265-272Research output: Contribution to journal › Journal article › Research › peer-review
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Short and Long-Term Controls on Active Layer and Permafrost Carbon Turnover Across the Arctic
Faucherre, S., Jørgensen, C. J., Blok, D., Weiss, N., Siewert, M. B., Bang-Andreasen, T., Hugelius, G., Kuhry, P. & Elberling, Bo, 2018, In: Journal of Geophysical Research: Biogeosciences. 123, 2, p. 372-390 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Shifts in the microbial community structure explain the response of soil respiration to land-use change but not to climate warming
Nazaries, L., Tottey, W., Robinson, L., Khachane, A., Abu Al-Soud, W., Sørensen, Søren Johannes & Singh, B. K., 2015, In: Soil Biology & Biochemistry. 89, p. 123-134 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year
Dealtry, S., Holmsgaard, P. N., Dunon, V., Jechalke, S., Ding, G., Kroegerrecklenfort, E., Heuer, H., Hansen, Lars Hestbjerg, Springael, D., Zuehlke, S., Sørensen, Søren Johannes & Smalla, K., 2014, In: Applied and Environmental Microbiology. 80, 13, p. 4012-4020 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequentially aerated membrane biofilm reactors for autotrophic nitrogen removal: microbial community composition and dynamics
Pellicer i Nàcher, C., Franck, S., Gülay, A., Ruscalleda, M., Terada, A., Abu Al-Soud, W., Hansen, M. A., Sørensen, Søren Johannes & Smets, B. F., 2014, In: Microbial Biotechnology. 7, 1, p. 32-43 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Sequencing of IncX-plasmids suggests ubiquity of mobile forms of a biofilm-promoting gene cassette recruited from Klebsiella pneumoniae
Burmølle, Mette, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012, In: PLOS ONE. 7, 7, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Sequence and comparative analysis of Lactococcus lactis c2 dairy bacteriphages with different thermal inactivation
Vogensen, Finn Kvist, Nielsen, C. L. M., Bashir, A., Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Heller, K. J., Sørensen, Søren Johannes & Knoechel, Susanne, Aug 2011.Research output: Contribution to conference › Poster › Research
- Published
Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Jacobsen, S., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2014, In: International Journal of Food Microbiology. 176, p. 29-37 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
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Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.Research output: Contribution to conference › Poster › Research
- Published
Selection for Cu-tolerant bacterial communities with altered composition, but unaltered richness, via long-term Cu exposure
Berg, J., Brandt, Kristian Koefoed, Abu Al-Soud, W., Holm, Peter Engelund, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Nybroe, O., 2012, In: Applied and Environmental Microbiology. 78, 20, p. 7438-7446 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Selection and propagation of IncP conjugative plasmids following long-term anthropogenic metal pollution in river sediments
Cyriaque, V., Jacquiod, S. J. A., Riber, Leise, Abu Al-Soud, W., Gillan, D. C., Sørensen, Søren Johannes & Wattiez, R., 2020, In: Journal of Hazardous Materials. 382, 10 p., 121173.Research output: Contribution to journal › Journal article › Research › peer-review
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Second generation sequencing for elucidating the diversity of bacteria and plasmids in soil
Holmsgaard, P. N., 2013, Department of Biology, Faculty of Science, University of Copenhagen. 160 p.Research output: Book/Report › Ph.D. thesis › Research
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Seasonality of denitrification in water-logged alder stands
Struwe, Sten & Kjøller, Annelise Helene, Oct 1990, In: Plant and Soil. 128, 1, p. 109-113 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rose replant disease: detailed analyses of plant reactions, root endophytes and rhizosphere microbial communities
Baumann, A., Yim, B., Grunewaldt-Stöcker, G., Liu, B., Beerhues, L., Sapp, M., Nesme, Joseph, Sørensen, Søren Johannes, Smalla, K. & Winkelmann, T., 2020, In: Acta Horticulturae. 1283, p. 97-104 8 p.Research output: Contribution to journal › Conference article › Research › peer-review
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Root exposure to apple replant disease soil triggers local defense response and rhizoplane microbiome dysbiosis
Balbín-Suárez, A., Jacquiod, S., Rohr, A. D., Liu, B., Flachowsky, H., Winkelmann, T., Beerhues, L., Nesme, Joseph, Sørensen, Søren Johannes, Vetterlein, D. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 4, 14 p., fiab031.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rodskud hos orkideer
Andersen, T. F. & Johansen, B. B., 1986, In: Orkideer. p. 161-163Research output: Contribution to journal › Journal article › Communication
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Risk factors for and pregnancy outcomes after SARS-CoV-2 in pregnancy according to disease severity: A nationwide cohort study with validation of the SARS-CoV-2 diagnosis
Aabakke, A. J. M., Petersen, T. G., Wøjdemann, K., Ibsen, M. H., Jonsdottir, F., Rønneberg, E., Andersen, C. S., Hammer, A., Clausen, T. D., Milbak, J., Burmester, L., Zethner, R., Lindved, B., Thorsen-Meyer, A., Khalil, M. R., Henriksen, B., Jønsson, L., Andersen, L. L. T., Karlsen, K. K., Pedersen, M. L. & 19 others, , 2023, In: Acta Obstetricia et Gynecologica Scandinavica. 102, 3, p. 282–293 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rise and fall of the Beringian steppe bison
Shapiro, B., Drummond, A. J., Rambaut, A., Wilson, M. C., Matheus, P. E., Sher, A. V., Pybus, O. G., Gilbert, M. T. P., Barnes, I., Binladen, J., Willerslev, E., Hansen, A. J., Baryshnikov, G. F., Burns, J. A., Davydov, S., Driver, J. C., Froese, D. G., Harington, C. R., Keddie, G., Kosintsev, P. & 7 others, , 2004, In: Science. 306, 5701, p. 1561-5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ringbærerne, en ny dyrerække
Willerslev, Eske, Sørensen, Martin Vinther & Hansen, A. J., 1998, In: Naturens Verden. 1, p. 15-25Research output: Contribution to journal › Journal article › Research
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Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
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Sequence and comparative analysis of Leuconostoc dairy bacteriophages
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Extreme emission of n2o from tropical wetland soil (pantanal, South America)
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Optimizing cleaning strategies for biofouling in reverse osmosis membrane systems: A comparative study using a self-formed instrument
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Interphylum dissemination of NDM-5-positive plasmids in hospital wastewater from Fuzhou, China: a single-centre, culture-independent, plasmid transmission study
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Using Nanopore Sequencing Deciphering Antibiotic Resistance Dissemination In The Wastewater Systems
Research output: Book/Report › Ph.D. thesis › Research