- Published
On the phylogeny of the metazoa in the light of Cycliophora and Micrognathozoa
Sorensen, M. V., Funch, P., Willerslev, Eske, Hansen, Anders Johannes & Olesen, Jørgen, 2000, In: Zoologischer Anzeiger. 239, 3-4Research output: Contribution to journal › Journal article › Research › peer-review
- Published
On "Apomorphic tendencies" and Phylogenetic Inference
Rasmussen, Finn N., 1983, In: Systematic Botany. 8, 3, p. 334-337 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Om "Punktualisme"
Rasmussen, Finn N., 1984, København, Inst. f. Syst. Botanik. 6 p.Research output: Book/Report › Compendium/lecture notes › Education
- Published
Observations on the genus Angraecopsis (Orchidaceae)
Rasmussen, Finn N., 1978, In: Norwegian Journal of Botany. 25, p. 137-144 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Observation of high seasonal variation in community structure of denitrifying bacteria in arable soil receiving artificial fertilizer and cattle manure by determining T-RFLP of nir gene fragments
Priemé, Anders & Wolsing, M., 2004, In: FEMS Microbiology Ecology. 48, 2, p. 261-271 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nældefamilien, Urticaceae
Rasmussen, Finn N., 2006, Dansk Flora. Frederiksen, S., Rasmussen, F. N. & Seberg, O. (eds.). 1. ed. København: Gyldendal, p. 419-420 2 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education
- Published
Nutrient Fortification of Human Donor Milk Affects Intestinal Function and Protein Metabolism in Preterm Pigs
Sun, Jing, Li, Yanqi, Nguyen, Duc Ninh, Mortensen, M. S., van den Akker, C. H. P., Skeath, T., Pors, S. E., Pankratova, Stanislava, Rudloff, S., Sørensen, Søren Johannes, Burrin, D. G., Thymann, Thomas & Sangild, Per Torp, 2018, In: Journal of Nutrition. 148, 3, p. 336-347 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Number of endemic and native plant species in the Galapagos Archipelago in relation to geographical parameters
Willerslev, Eske, Hansen, Anders Johannes, Nielsen, K. K. & Adsersen, Henning Emil, 2002, In: Ecography. 25, 1, p. 109-119Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from Escherichia coli which enables biofilm formation and multidrug efflux
Norman, A., Hansen, Lars Hestbjerg, She, Q. & Sørensen, Søren Johannes, 2008, In: Plasmid. 60, 1, p. 59-74 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel insight into the genetic context of the cadAB genes from a 4-chloro-2-methylphenoxyacetic acid-degrading Sphingomonas
Nielsen, Tue Kjærgaard, Xu, Z., Gozdereliler, E., Aamand, J., Hansen, Lars Hestbjerg & Sørensen, S. R., 2013, In: P L o S One. 8, 12, 9 p., e83346.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel and conserved bacterial mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine
Kroer, Niels, Møller, A., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.Research output: Contribution to conference › Poster › Research
- Published
Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicus
Greve, B., Jensen, S., Phan, H., Brügger, K., Zillig, W., She, Q. & Garrett, Roger Antony, 2005, In: Archaea. 1, 5, p. 319-325Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel Perspective on Valorization of Keratinous Materials using Microbial Consortia
Kang, D., 2019, Department of Biology, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Notes on the morphology and taxonomy of Diceratostele gabonensis (Orchidaceae)
Rasmussen, Finn N. & Rasmussen, Hanne Nina, 1979, In: Systematics and Geography of Plants. 49, p. 139-148 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nordens sjældne orkideer
Johansen, B. B., 1987, In: Illustreret Videnskab. 10, p. 44-47Research output: Contribution to journal › Journal article › Communication
- Published
Non-enzymatic depolymerization of cotton cellulose by fungal mimicking metabolites
Hastrup, A. C. S., Howell, C., Jensen, B. & Green, F., 2011, In: International Biodeterioration and Biodegradation. 65, 3, p. 553-559 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Non-destructive sampling of ancient insect DNA
Thomsen, P. F., Elias, S., Gilbert, M Thomas P, Haile, James Seymour, Munch, K., Kuzmina, S., Froese, D. G., Sher, A., Holdaway, R. N. & Willerslev, Eske, 2009, In: PLoS ONE. 4, 4, p. e5048Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Noise-induced multimode behavior in excitable systems
Postnov, D. E., Sosnovtseva, Olga, Han, S. K. & Kim, W. S., 1 Jul 2002, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 66, 1 Pt 2, p. 016203Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Noise-induced multimode behavior in excitable systems
Postnov, D. E., Sosnovtseva, Olga, Han, S. & Kim, W., Jul 2002, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 66, 1Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nitrous oxide production and consumption potential in an agricultural and a forest soil
Yu, K., Struwe, Sten, Kjøller, A. & Guanxiong, C., 2008, In: Communications in Soil Science and Plant Analysis. 39, 15 & 16, p. 2205-2220 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nitrogenase gene amplicons from global marine surface waters are dominated by genes of non-cyanobacteria
Farnelid, H., Andersson, A. F., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Steward, G. F., Hagström, Å. & Riemann, Lasse, 2011, In: P L o S One. 6, 4, p. e19223 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nitrogen and Nod factor signaling determine Lotus japonicus root exudate composition and bacterial assembly
Tao, Ke, Jensen, I. T., Zhang, S., Villa-Rodríguez, E., Blahovska, Z., Salomonsen, C. L., Martyn, A., Björgvinsdóttir, Þ. N., Kelly, S., Janss, L., Glasius, M., Waagepetersen, R. & Radutoiu, S., 2024, In: Nature Communications. 15, 1, 15 p., 3436.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
New ecological niches and habitats for Chlorophyll d- containing cyanobacteria
Behrendt, L., Chen, M., Larkum, A. W. D., Ralph, P. J., Sørensen, Søren Johannes, Trampe, E. & Kühl, Michael, 2010.Research output: Contribution to conference › Poster › Research
- Published
New Data from an Enigmatic Phylum: Evidence from molecular sequence data supports a sister group relationship between Loricifera and Nematomorpha
Sørensen, Martin Vinther, Hebsgaard, M. B., Bang-Berthelsen, I. H., Glenner, Henrik, Willerslev, Eske & Kristensen, Reinhardt Møbjerg, 2008, In: Journal of Zoological Systematics and Evolutionary Research Online. 46, p. 231-239Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Neonatal metabolome of caesarean section and risk of childhood asthma
Gürdeniz, G., Ernst, M., Rago, D., Kim, M., Courraud, J., Stokholm, Jakob, Bønnelykke, Klaus, Björkbom, A., Trivedi, Urvish, Sørensen, Søren Johannes, Brix, Susanne, Hougaard, D., Rasmussen, Morten Arendt, Cohen, A. S., Bisgaard, H. & Chawes, Bo Lund Krogsgaard, 2022, In: The European Respiratory Journal. 59, 6, 11 p., 2102406.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Naturens orden - klassifikation og udviklingshistorie
Bonde, N. & Rasmussen, Finn N., 1985, Naturens historiefortællere. Bonde, N., Hoffmeyer, J. & Stangerup, H. (eds.). 1. ed. København, Vol. 1. p. 331-364 34 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication
- Published
Natural hot spots for gain of multiple resistances: arsenic and antibiotic resistances in heterotrophic, aerobic bacteria from marine hydrothermal vent fields
Farias, P., Santo, C. E., Branco, R., Francisco, R., Santos, S., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Morais, P. V., 2015, In: Applied and Environmental Microbiology. 81, 7, p. 2534-2543 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Natural decay process affects the abundance and community structure of Bacteria and Archaea in Picea abies logs
Rinta-Kanto, J. M., Sinkko, H., Rajala, T., Abu Al-Soud, W., Sørensen, Søren Johannes, Tamminen, M. V. & Timonen, S., 2016, In: F E M S Microbiology Ecology. 92, 7, 10 p., fiw087.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nanopore-based long-read metagenomics uncover the resistome intrusion by antibiotic resistant bacteria from treated wastewater in receiving water body
Wu, Bruce, Che, Y., Dang, C., Zhang, M., Zhang, X., Sun, Y., Li, X., Zhang, T. & Xia, Y., 2022, In: Water Research. 226, 10 p., 119282.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nanofiltration as an Efficient Tertiary Wastewater Treatment: Elimination of Total Bacteria and Antibiotic Resistance Genes from the Discharged Effluent of a Full-Scale Wastewater Treatment Plant
Oliveira, M., Leonardo, I. C., Silva, A. F., Crespo, J. G., Nunes, M. & Crespo, M. T. B., 2022, In: Antibiotics. 11, 5, 12 p., 630.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mutation-selection models of codon substitution and their use to estimate selective strengths on codon usage
Yang, Z. & Nielsen, Rasmus, 2008, In: Molecular Biology and Evolution. 25, 3, p. 568-79 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiplex PCR with minisequencing as an effective high-throughput SNP typing method for formalin-fixed tissue.
Gilbert, M Thomas P, Sanchez, J. J., Haselkorn, T., Jewell, L. D., Lucas, S. B., Van Marck, E., Børsting, Claus, Morling, Niels & Worobey, M., 2007, In: Electrophoresis. 28, 14, p. 2361-7 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mother-offspring data in a study of the mating system in a natural population of Bulinus globosus (Gastropoda: Planorbidae) in Zimbabwe
Mukaratira, S., Chandiwana, S. K., Siegismund, Hans Redlef & Kristensen, T. K., 1996, In: Genetics Research. 68, 2, p. 95-100Research output: Contribution to journal › Journal article › Research › peer-review
- Published
More on contamination: the use of asymmetric molecular behavior to identify authentic ancient human DNA.
Malmström, H., Svensson, E. M., Gilbert, M Thomas P, Willerslev, Eske, Götherström, A. & Holmlund, G., 2007, In: Molecular Biology and Evolution. 24, 4, p. 998-1004 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Monocotyledon Evolution - Characters and Phylogentic Estimation
Dahlgren, R. & Rasmussen, Finn N., 1983, Evolutionary Biology. Hecht, M. K., Wallace, B. & Prance, G. T. (eds.). New York, Vol. 16. p. 255-395 141 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Monitoring plasmid-mediated horizontal gene transfer in microbiomes: recent advances and future perspectives
Pinilla Redondo, Rafael, Cyriaque, V., Jacquiod, S., Sørensen, Søren Johannes & Riber, Leise, 2018, In: Plasmid. 99, p. 56-67Research output: Contribution to journal › Review › Research › peer-review
- Published
Molekyler og morfologi som redskaber til rekonstruktion af hvalernes evolution
Steeman, M. E., 2008, In: Dansk Naturhistorisk Forenings Årsskrift. 18, p. 18-23 6 p.Research output: Contribution to journal › Journal article › Research
- Published
Molecular methods for assessing and manipulating the diversity of microbial populations and processes
Sørensen, Søren Johannes, de Lipthay, J. R., Müller, A. K., Barkay, T., Hansen, Lars Hestbjerg & Rasmussen, L. D., 2002, Enzymes in the Environment: Activity, Ecology, and Applications. Burns, R. G. & Dick, R. P. (eds.). Marcel Dekker, 363 p. (Books in soils, plants, and the environment).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Molecular identification of mycorrhizal fungi in Neuwiedia veratrifolia (Orchidaceae)
Kristiansen, K. A., Freudenstein, J. V., Rasmussen, Finn N. & Rasmussen, Hanne Nina, 2004, In: Molecular Phylogenetics and Evolution. 33, 2, p. 251-258 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling transfer of vaginal microbiota from mother to infant in early life
Mortensen, M. S., Rasmussen, Morten Arendt, Stokholm, Jakob, Brejnrod, A. D., Balle, C., Thorsen, J., Krogfelt, K. A., Bisgaard, H. & Sørensen, Søren Johannes, 2021, In: eLife. 10, 19 p., e57051.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mode of delivery shapes gut colonization pattern and modulates regulatory immunity in mice
Hansen, Camilla Hartmann Friis, Andersen, L. S. F., Krych, Lukasz, Metzdorff, S. B., Hasselby, Jane Preuss, Skov, Søren, Nielsen, Dennis Sandris, Buschard, K., Hansen, Lars Hestbjerg & Hansen, Axel Kornerup, 2014, In: Journal of Immunology. 193, 3, p. 1213-1222 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mixed-species biofilms in the food industry: current knowledge and novel control strategies
Yuan, L., Hansen, Mads Frederik, Røder, Henriette Lyng, Wang, N., Burmølle, Mette & He, G., 2020, In: Critical Reviews in Food Science and Nutrition. 60, 13, p. 2277-2293Research output: Contribution to journal › Review › Research › peer-review
- Published
Mixed-linkage (1-->3),(1-->4)-beta-D-glucan is not unique to the Poales and is an abundant component of Equisetum arvense cell walls
Sørensen, I., Pettolino, F. A., Wilson, S. M., Doblin, M. S., Johansen, B., Bacic, A. & Willats, W. G. T., 2008, In: Plant Journal. 54, 3, p. 510-21 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mitochondrial DNA diversity and population structure of a forest-dependent rodent, Praomys taitae (Rodentia: Muridae) Heller 1911, in the fragmented forest patches of Taita Hills, Kenya
Nyakaana, S., Tumusiime, C., Oguge, N., Siegismund, Hans Redlef, Arctander, P. & Muwanika, V., 2008, In: South African Journal of Science. 104, 11/12, p. 499-504Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mining of unexplored habitats for novel chitinases - chiA as a helper gene proxy in metagenomics
Cretoiu, M. S., Kielak, A. M., Abu Al-Soud, W., Sørensen, Søren Johannes & van Elsas, J. D., 2012, In: Applied Microbiology and Biotechnology. 94, 5, p. 1347-1358 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mid-Holocene decline in African buffalos inferred from Bayesian coalescence-based analyses of microsatellites and mitochondrial DNA
Heller, Rasmus, Lorenzen, Eline, Okello, J. B. A., Masembe, C. & Siegismund, Hans Redlef, 2008, In: Molecular Ecology. 17, 22, p. 4845–4858Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microsatellite analysis of the natterjack toad (Bufo calamita) in Denmark: populations are islands in a fragmented landscape
Allentoft, Morten Erik, Siegismund, Hans Redlef, Briggs, L. & Andersen, L. W., 2009, In: Conservation Genetics. 10, 1, p. 15-28Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microfungi of decomposing red alder leaves and their substrate utilization
Kjøller, Annelise Helene & Struwe, Sten, 1980, In: Soil Biology and Biochemistry. 12, 4, p. 425-431 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microfungi in ecosystems: fungal occurrence and activity in litter and soil.
Kjøller, Annelise Helene & Struwe, Sten, 1982, In: Oikos. 39, 3, p. 389-422 34 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbiomes associated with infective stages of root-knot and lesion nematodes in soil
Elhadyl, A., Giné, A., Topalovic, O., Jacquiod, S. J. A., Sørensen, Søren Johannes, Javier Sorribas, F. & Heuer, H., 4 May 2017, In: PLoS ONE. 12, 5, 17 p., e0177145.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial indicators for soil quality
Schloter, M., Nannipieri, P., Sørensen, Søren Johannes & van Elsas, J. D., Jan 2018, In: Biology and Fertility of Soils. 54, 1, p. 1-10 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella
Behrendt, L., Larkum, A. W. D., Trampe, Erik, Norman, A., Sørensen, Søren Johannes & Kühl, Michael, 2012, In: I S M E Journal. 6, p. 1222-1237 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity in a permanently cold and alkaline environment in Greenland
Glaring, M. A., Vester, J. K., Lylloff, J. E., Abu Al-Soud, W., Sørensen, Søren Johannes & Stougaard, P., 2015, In: PLoS ONE. 10, 4, 22 p., e0124863.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity and putative opportunistic pathogens in dishwasher biofilm communities
Raghupathi, P. K., Zupančič, J., Brejnrod, A. D., Jacquiod, S. J. A., Houf, K., Burmølle, Mette, Gunde-Cimerman, N. & Sørensen, Søren Johannes, 2018, In: Applied and Environmental Microbiology. 84, 5, 17 p., e02755-17.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity and dynamics throughout manufacturing and ripening of surface ripened semi-hard Danish Danbo cheeses investigated by culture-independent techniques
Ryssel, M., Johansen, P., Abu Al-Soud, W., Sørensen, Søren Johannes, Arneborg, Nils & Jespersen, Lene, 2015, In: International Journal of Food Microbiology. 215, p. 124-30 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity and PAH catabolic genes tracking spatial heterogeneity of PAH concentrations
Bengtsson, G., Törneman, N., Lipthay, J. R. D. & Sørensen, Søren Johannes, 2013, In: Microbial Ecology. 65, 1, p. 91-100 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial community analysis of soils under different soybean cropping regimes in the Argentinean south-eastern Humid Pampas
Fernandez-Gnecco, G., Smalla, K., Maccario, Lorrie, Sørensen, Søren Johannes, Barbieri, P., Consolo, V. F., Covacevich, F. & Babin, D., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p., fiab007.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial changes during oil decomposition in soil
Pinholt, Y., Struwe, Sten & Kjøller, Annelise Helene, Jul 1979, In: Ecography. 2, 3, p. 195-200 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial Interactions in Electroactive Biofilms for Environmental Engineering Applications: A Role for Nonexoelectrogens
Fessler, M., Madsen, Jonas Stenløkke & Zhang, Y., 2022, In: Environmental Science & Technology. 56, 22, p. 15273-15279 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbe-plant Interactions: Impact of bacterial interactions and multispecies biofilms on plant growth and drought tolerance
Yang, Nan, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 115 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Micro-scale intermixing: a requisite for stable and synergistic co-establishment in a four-species biofilm
Liu, W., Russel, J., Burmølle, Mette, Sørensen, Søren Johannes & Madsen, Jonas Stenløkke, 2018, In: I S M E Journal. 12, p. 1940-1951 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Methanotrophs, methanogens and microbial community structure in livestock slurry surface crusts
Duan, Y. F., Abu Al-Soud, W., Brejnrod, A. D., Sørensen, Søren Johannes, Elsgaard, L., Petersen, S. O. & Boon, N., 2014, In: Journal of Applied Microbiology. 117, 4, p. 1066-1078 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Methane uptake by a selection of soils in Ghana with different land use
Priemé, Anders & Christensen, Søren, 1999, In: Journal of Geophysical Research - Oceans. 104, 19, p. 23617-23622 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metamorphosis in balanomorphan, pedunculated, and parasitic barnacles: a video-based analysis
Høeg, Jens Thorvald, Maruzzo, D., Okano, K., Glenner, Henrik & Chan, B. K. K., 2012, In: Integrative and Comparative Biology. 52, 3, p. 337-347 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metamobilomics — expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing
Li, L., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: Clinical Microbiology and Infection. 18, Suppl. 4, p. 8-11 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metamobilomics - Expanding the environmental mobilome with high throughput sequencing
Norman, A., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
Metal-induced bacterial interactions promote diversity in river-sediment microbiomes
Cyriaque, V., Géron, A., Billon, G., Nesme, Joseph, Werner, J., Gillan, D. C., Sørensen, Søren Johannes & Wattiez, R., 2020, In: F E M S Microbiology Ecology. 96, 6, 12 p., fiaa076.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metal stressors consistently modulate bacterial conjugal plasmid uptake potential in a phylogenetically conserved manner
Klümper, U., Dechesne, A., Riber, Leise, Brandt, Kristian Koefoed, Gülay, A., Sørensen, Søren Johannes & Smets, B. F., 2017, In: The ISME Journal. 11, 1, p. 152-165 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic evidence for co-occurrence of antibiotic, biocide and metal resistance genes in pigs
Li, Xuan Ji, Rensing, C., Vestergaard, G., Arumugam, Mani, Nesme, Joseph, Gupta, S., Brejnrod, A. D. & Sørensen, Søren Johannes, 2022, In: Environment International. 158, 10 p., 106899.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic comparison of antibiotic resistance genes associated with liquid and dewatered biosolids
McCall, C. A., Bent, E., Jørgensen, T. S., Dunfield, K. E. & Habash, M. B., 2016, In: Journal of Environmental Quality. 45, 2, p. 463-470 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analysis of dairy bacteriophages: extraction method and pilot study on whey samples derived from using undefined and defined mesophilic starter cultures
Muhammed, Musemma Kedir, Kot, Witold, Neve, H., Mahony, J., Castro Mejia, J. L., Krych, Lukasz, Hansen, L. H., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Heller, K. J., van Sinderen, D. & Vogensen, Finn Kvist, 2017, In: Applied and Environmental Microbiology. 83, 19, 15 p., e00888-17.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analysis of a keratin-degrading bacterial consortium provides insight into the keratinolytic mechanisms
Kang, D., Huang, Y., Nesme, Joseph, Herschend, J., Jacquiod, S., Kot, Witold, Hansen, Lars Hestbjerg, Lange, L. & Sørensen, Søren Johannes, 2021, In: Science of the Total Environment. 761, 9 p., 143281.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analyses reveal no differences in genes involved in cellulose degradation under different tillage treatments
De Vries, M., Schöler, A., Ertl, J., Xu, Z. & Schloter, M., 2015, In: FEMS Microbiology Ecology. 91, 7, p. 1-10 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomes provide valuable comparative information on soil microeukaryotes
Jacquiod, S. J. A., Stenbæk, J., Santos, S. S., Winding, A., Sørensen, Søren Johannes & Priemé, Anders, 2016, In: Research in Microbiology. 167, 5, p. 436-450 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolism of Milk Oligosaccharides in Preterm Pigs Sensitive to Necrotizing Enterocolitis
Rudloff, S., Kuntz, S., Rasmussen, S. O., Roggenbuck, M., Sprenger, N., Kunz, C., Sangild, Per Torp & Bering, S. B., 2019, In: Frontiers in Nutrition. 6, 11 p., 23.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolic variability in bioprocessing: implications of microbial phenotypic heterogeneity
Delvigne, F., Zune, Q., Lara, A. R., Abu Al-Soud, W. & Sørensen, Søren Johannes, 2014, In: Trends in Biotechnology. 32, 12, p. 608-616 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Metabolic Profiling of Interspecies Interactions During Sessile Bacterial Cultivation Reveals Growth and Sporulation Induction in Paenibacillus amylolyticus in Response to Xanthomonas retroflexus
Herschend, J., Ernst, M., Koren, K., Melnik, A. V., da Silva, R. R., Røder, Henriette Lyng, Damholt, Z. B. V., Hägglund, Per Mårten, Svensson, B., Sørensen, Søren Johannes, Kühl, Michael, Dorrestein, P. C. & Burmølle, Mette, 2022, In: Frontiers in Cellular and Infection Microbiology. 12, 17 p., 805473.Research output: Contribution to journal › Journal article › Research › peer-review
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Mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine
Møller, A. K., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Boyd, E. S. & Kroer, Niels, 2014, In: FEMS Microbiology Ecology. 87, 1, p. 52-63 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Measurement of the length of fungal hyphae by the membrane filter technique as a method for comparing fungal occurrence in cultivated field soils
Elmholt, S. & Kjøller, Annelise Helene, 1987, In: Soil Biology and Biochemistry. 19, 6, p. 679-682 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Maximum likelihood estimation of ancestral codon usage bias parameters in Drosophila
Nielsen, Rasmus, Bauer DuMont, V. L., Hubisz, M. J. & Aquadro, C. F., 2007, In: Molecular Biology and Evolution. 24, 1, p. 228-35 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Maturation of the gut microbiome and risk of asthma in childhood
Stokholm, Jakob, Blaser, M. J., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Waage, J. E., Vinding, R. K., Schoos, A. M., Kunøe, A., Fink, N. R., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Brejnrod, A. D., Mortensen, M. S., Abu Al-Soud, W., Sørensen, Søren Johannes & Bisgaard, H., 2018, In: Nature Communications. 9, 10 p., 141.Research output: Contribution to journal › Journal article › Research › peer-review
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Mating system system estimates and effective population numbers for an isolated noble fir (Abies procera) clonal seed orchard in Denmark
Siegismund, Hans Redlef, Kjær, Erik Dahl & Nielsen, Ulrik Braüner, 1996, In: Canadian Journal of Forest Research. 26, p. 1135-1141Research output: Contribution to journal › Journal article › Research › peer-review
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Mapping of HNF4alpha target genes in intestinal epithelial cells
Boyd, M., Bressendorff, Simon, Moller, J., Olsen, Jørgen & Troelsen, J., 2009, In: BMC Gastroenterology. 9, 1, p. 68Research output: Contribution to journal › Journal article › Research › peer-review
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Manure and Doxycycline Affect the Bacterial Community and Its Resistome in Lettuce Rhizosphere and Bulk Soil
Blau, K., Jacquiod, S., Sørensen, Søren Johannes, Su, J., Zhu, Y., Smalla, K. & Jechalke, S., 2019, In: Frontiers in Microbiology. 10, p. 1-15 725.Research output: Contribution to journal › Journal article › Research › peer-review
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Maize lines with different nitrogen use efficiency select bacterial communities with different β-glucosidase-encoding genes and glucosidase activity in the rhizosphere
Pathan, S. I., Ceccherini, M. T., Hansen, M. A., Giagnoni, L., Ascher, J., Arenella, M., Sørensen, Søren Johannes, Pietramellara, G., Nannipieri, P. & Renella, G., 2015, In: Biology and Fertility of Soils. 51, 8, p. 995-1004 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Lower level relationships in the mushroom genus Cortinarius (Basidiomycota, Agaricales): A comparison of RPB1, RPB2, and ITS phylogenies
Frøslev, Tobias Guldberg, Matheny, P. B. & Hibbett, D. S., 2005, In: Molecular Phylogenetics and Evolution. 37, 2, p. 602-618 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Low-abundant species facilitates specific spatial organization that promotes multispecies biofilm formation
Liu, W., Russel, J., Røder, Henriette Lyng, Madsen, Jonas Stenløkke, Burmølle, Mette & Sørensen, Søren Johannes, 2017, In: Environmental Microbiology. 19, 7, p. 2893-2905 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Low Turnover of Soil Bacterial rRNA at Low Temperatures
Schostag, M. D., Albers, C. N., Jacobsen, C. S. & Priemé, Anders, 2020, In: Frontiers in Microbiology. 11, 5 p., 962.Research output: Contribution to journal › Journal article › Research › peer-review
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Loss of microbial diversity in soils is coincident with reductions in some specialized functions
Singh, B. K., Quince, C., Macdonald, C. A., Khachane, A., Thomas, N., Abu Al-Soud, W., Sørensen, Søren Johannes, He, Z., White, D., Sinclair, A., Crooks, B., Zhou, J. & Campbell, C. D., 2014, In: Environmental Microbiology. 16, 8, p. 2408-2420 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term soil metal exposure impaired temporal variation in microbial metatranscriptomes and enriched active phages
Jacquiod, S., Nunes, I., Brejnrod, A., Hansen, M. A., Holm, Peter Engelund, Johansen, A., Brandt, Kristian Koefoed, Priemé, Anders & Sørensen, Søren Johannes, 2018, In: Microbiome. 6, p. 1-14 223.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term persistence of bacterial DNA
Willerslev, Eske, Hansen, Anders Johannes, Ronn, R., Brand, T. B., Barnes, I., Wiuf, C., Gilichinsky, D., Mitchell, D. & Cooper, A., 2004, In: Current Biology. 14, 1, p. R9-10Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term microbial control of nutrient availability and plant biomass in a subarctic-alpine heath after addition of carbon, fertilizer and fungicide
Haugwitz-Hardenberg-Reventlow, M. S., Michelsen, Anders & Schmidt, Inger Kappel, 2011, In: Soil Biology & Biochemistry. 43, 1, p. 179-187 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term industrial metal contamination unexpectedly shaped diversity and activity response of sediment microbiome
Jacquiod, S. J. A., Cyriaque, V., Riber, Leise, Al-Soud, W. A., Gillan, D. C., Wattiez, R. & Sørensen, Søren Johannes, 15 Feb 2018, In: Journal of Hazardous Materials. 344, p. 299-307 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term immersion of compostable plastics in marine aquarium: Microbial biofilm evolution and polymer degradation
Delacuvellerie, A., Brusselman, A., Cyriaque, V., Benali, S., Moins, S., Raquez, J. M., Gobert, S. & Wattiez, R., 2023, In: Marine Pollution Bulletin. 189, 10 p., 114711.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term conservation tillage with reduced nitrogen fertilization intensity can improve winter wheat health via positive plant–microorganism feedback in the rhizosphere
Behr, J. H., Kuhl-Nagel, T., Sommermann, L., Moradtalab, N., Chowdhury, S. P., Schloter, M., Windisch, S., Schellenberg, I., Maccario, Lorrie, Sørensen, Søren Johannes, Rothballer, M., Geistlinger, J., Smalla, K., Ludewig, U., Neumann, G., Grosch, R. & Babin, D., 2024, In: FEMS Microbiology Ecology. 100, 2, 18 p., fiae003.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term and realistic global change manipulations had low impact on diversity of soil biota in temperate heathland
Holmstrup, M., Damgaard, C., Schmidt, Inger Kappel, Arndal, M. F., Beier, Claus, Mikkelsen, T. N., Ambus, Per Lennart, Larsen, Klaus Steenberg, Pilegaard, K., Michelsen, Anders, Andresen, L. C., Haugwitz, M. S., Bergmark, L., Priemé, Anders, Zaitsev, A. S., Georgieva, S., Dam, M., Vestergård, M. & Christensen, Søren, 2017, In: Scientific Reports. 7, 11 p., 41388.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-term addition of fertilizer, labile carbon, and fungicide alters the biomass of plant functional groups in a subarctic-alpine community
Haugwitz-Hardenberg-Reventlow, M. S. & Michelsen, Anders, 2011, In: Plant Ecology. 212, 4, p. 715-726 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-Term Fertilization Strategy Impacts Rhizoctonia solani–Microbe Interactions in Soil and Rhizosphere and Defense Responses in Lettuce
Sommermann, L., Babin, D., Behr, J. H., Chowdhury, S. P., Sandmann, M., Windisch, S., Neumann, G., Nesme, Joseph, Sørensen, Søren Johannes, Schellenberg, I., Rothballer, M., Geistlinger, J., Smalla, K. & Grosch, R., 2022, In: Microorganisms. 10, 9, 27 p., 1717.Research output: Contribution to journal › Journal article › Research › peer-review
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Long-Range PCR Reveals the Genetic Cargo of IncP-1 Plasmids in the Complex Microbial Community of an On-Farm Biopurification System Treating Pesticide-Contaminated Wastewater
Dunon, V., Holmsgaard, P. N., Dealtry, S., Lavigne, R., Sørensen, Søren Johannes, Smalla, K., Top, E. M. & Springael, D., 2022, In: Applied and Environmental Microbiology. 88, 3, 17 p., e01648-21.Research output: Contribution to journal › Journal article › Research › peer-review
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Localizing recent adaptive evolution in the human genome
Williamson, S. H., Hubisz, M. J., Clark, A. G., Payseur, B. A., Bustamante, C. D. & Nielsen, Rasmus, 2007, In: PLoS Genetics. 3, 6, p. e90Research output: Contribution to journal › Journal article › Research › peer-review
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Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
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Sequence and comparative analysis of Leuconostoc dairy bacteriophages
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Extreme emission of n2o from tropical wetland soil (pantanal, South America)
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Optimizing cleaning strategies for biofouling in reverse osmosis membrane systems: A comparative study using a self-formed instrument
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Interphylum dissemination of NDM-5-positive plasmids in hospital wastewater from Fuzhou, China: a single-centre, culture-independent, plasmid transmission study
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Using Nanopore Sequencing Deciphering Antibiotic Resistance Dissemination In The Wastewater Systems
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