Microbiology

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  1. Published

    The infant gut resistome associates with E. coli, environmental exposures, gut microbiome maturity, and asthma-associated bacterial composition

    Li, Xuan Ji, Stokholm, Jakob, Brejnrod, A., Vestergaard, G. A., Russel, J., Trivedi, Urvish, Thorsen, Jonathan Jan Ilve, Gupta, S., Hjelmsø, M. H., Shah, S. A., Rasmussen, Morten Arendt, Bisgaard, H. & Sørensen, Søren Johannes, 2021, In: Cell Host & Microbe. 29, 6, p. 975–987.e4 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    The impact of the conjugative IncP-1 plasmid pKJK5 on multispecies biofilm formation is dependent on the plasmid host

    Røder, Henriette Lyng, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Burmølle, Mette, 2013, In: F E M S Microbiology Letters. 344, 2, p. 186-192 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    The impact of founder events on chromosomal variability in multiply mating species

    Pool, J. E. & Nielsen, Rasmus, 2008, In: Molecular Biology and Evolution. 25, 8, p. 1728-36 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The impact of exercise training and resveratrol supplementation on gut microbiota composition in high-fat diet fed mice

    Brandt, N., Kotowska, D., Kristensen, C. M., Olesen, J., Lützhøft, Ditte Olsen, Halling, Jens Frey, Hansen, M., Al-Soud, W. A., Hansen, Lars Hestbjerg, Kiilerich, P. & Pilegaard, Henriette, 2018, In: Physiological Reports. 6, 20, p. 1-11 e13881.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    The human milk microbiota is modulated by maternal diet

    Padilha, M., Danneskiold-Samsøe, Niels Banhos, Brejnrod, A., Hoffmann, C., Cabral, V. P., Iaucci, J. D. M., Sales, C. H., Fisberg, R. M., Cortez, R. V., Brix, S., Taddei, C. R., Kristiansen, Karsten & Saad, S. M. I., 2019, In: Microorganisms. 7, 11, 18 p., 502.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    The human microbiome: one step forward

    Gupta, S., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 120 p.

    Research output: Book/Report › Ph.D. thesis › Research

  7. Published

    The gynostemium of the neottiod orchids

    Rasmussen, Finn N., 1982, In: Opera Botanica. 65, p. 1-96 96 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    The gynostemium of Bulbophyllum ecornutum (J. J. Smith) J. J. Smith (Orchidaceae)

    Rasmussen, Finn N., 1985, In: Botanical Journal of the Linnean Society. 91, p. 447-456 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults

    Nielsen, Dennis Sandris, Larsen, Nadja, Vogensen, Finn Kvist, van den Berg, F. W. J., Andreasen, A. S., Pedersen, B. K., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  10. Published

    The giraffe (Giraffa camelopardalis) rumen microbiome

    Roggenbuck, M., Sauer, C., Poulsen, M., Bertelsen, M. F. & Sørensen, Søren Johannes, 2014, In: F E M S Microbiology Ecology. 90, 1, p. 237-246 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    The genus Corymborkis Thou. (Orchidaceae) a taxonomic revision

    Rasmussen, Finn N., 1977, In: Botanisk Tidsskrift. 71, p. 161-192 32 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The genome sequence of the lactic acid bacterium, Carnobacterium maltaromaticum ATCC 35586 encodes potential virulence factors

    Leisner, Jørgen, Hansen, M. A., Larsen, M. H., Hansen, L., Ingmer, Hanne & Sørensen, Søren Johannes, 2012, In: International Journal of Food Microbiology. 152, 3, p. 107-115 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    The genome of the social amoeba Dictyostelium discoideum.

    Eichinger, L., Pachebat, J. A., Glöckner, G., Rajandream, M-A., Sucgang, R., Berriman, M., Song, J., Olsen, R., Szafranski, K., Xu, Q., Tunggal, B., Kummerfeld, S., Madera, M., Konfortov, B. A., Rivero, F., Bankier, A. T., Lehmann, R., Hamlin, N., Davies, R., Gaudet, P. & 77 others, Fey, P., Pilcher, K., Chen, G., Saunders, D., Sodergren, E., Davis, P., Kerhornou, A., Nie, X., Hall, N., Anjard, C., Hemphill, L., Bason, N., Farbrother, P., Desany, B., Just, E., Morio, T., Rost, R., Churcher, C., Cooper, J., Haydock, S., van Driessche, N., Cronin, A., Goodhead, I., Muzny, D., Mourier, T., Pain, A., Lu, M., Harper, D., Lindsay, R., Hauser, H., James, K., Quiles, M., Madan Babu, M., Saito, T., Buchrieser, C., Wardroper, A., Felder, M., Thangavelu, M., Johnson, D., Knights, A., Loulseged, H., Mungall, K., Oliver, K., Price, C., Quail, M. A., Urushihara, H., Hernandez, J., Rabbinowitsch, E., Steffen, D., Sanders, M., Ma, J., Kohara, Y., Sharp, S., Simmonds, M., Spiegler, S., Tivey, A., Sugano, S., White, B., Walker, D., Woodward, J., Winckler, T., Tanaka, Y., Shaulsky, G., Schleicher, M., Weinstock, G., Rosenthal, A., Cox, E. C., Chisholm, R. L., Gibbs, R., Loomis, W. F., Platzer, M., Kay, R. R., Williams, J., Dear, P. H., Noegel, A. A., Barrell, B. & Kuspa, A., 2005, In: Nature. 435, 7038, p. 43-57 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The genome of the simian and human malaria parasite Plasmodium knowlesi

    Pain, A., Böhme, U., Berry, A. E., Mungall, K., Finn, R. D., Jackson, A. P., Mourier, T., Mistry, J., Pasini, E. M., Aslett, M. A., Balasubrammaniam, S., Borgwardt, K., Brooks, K., Carret, C., Carver, T. J., Cherevach, I., Chillingworth, T., Clark, T. G., Galinski, M. R., Hall, N. & 34 others, Harper, D., Harris, D., Hauser, H., Ivens, A., Janssen, C. S., Keane, T., Larke, N., Lapp, S., Marti, M., Moule, S., Meyer, I. M., Ormond, D., Peters, N., Sanders, M., Sanders, S., Sargeant, T. J., Simmonds, M., Smith, F., Squares, R., Thurston, S., Tivey, A. R., Walker, D., White, B., Zuiderwijk, E., Churcher, C., Quail, M. A., Cowman, A. F., Turner, C. M. R., Rajandream, M. A., Kocken, C. H. M., Thomas, A. W., Newbold, C. I., Barrell, B. G. & Berriman, M., 2008, In: Nature. 455, 7214, p. 799-803 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The genome of Hyperthermus butylicus: a sulfur-reducing, peptide fermenting, neutrophilic Crenarchaeote growing up to 108 degrees C

    Brügger, K., Chen, L., Stark, M., Zibat, A., Redder, P., Ruepp, A., Awayez, M., She, Q., Garrett, Roger Antony & Klenk, H., 2007, In: Archaea. 2, 2, p. 127-35 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The genetic origins of the Andaman Islanders

    Endicott, P., Gilbert, M Thomas P, Stringer, C., Lalueza-Fox, C., Willerslev, Eske, Hansen, Anders Johannes & Cooper, A., 2002, In: American Journal of Human Genetics. 72, 1, p. 178-84 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The first record of "spelaeoid" bears in Arctic Siberia

    Sher, A. V., Weinstock Arenovitz, J., Baryshnikov, G. F., Davydov, S. P., Boeskorov, G. G., Zazhigin, V. S. & Nikolskiy, P. A., 2011, In: Quaternary Science Reviews. 30, 17-18, p. 2238-2249 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The feather moss Hylocomium splendens affects the transcriptional profile of a symbiotic cyanobacterium in relation to acquisition and turnover of key nutrients

    Alvarenga, Danillo Oliveira, Priemé, Anders & Rousk, Kathrin, 2024, In: Microbial Ecology. 87, 11 p., 49.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The fate of mercury in Arctic terrestrial and aquatic ecosystems, a review

    Douglas, T. A., Loseto, L. L., Macdonald, R. W., Outridge, P., Dommergue, A., Poulain, A., Amyot, M., Barkay, T., Berg, T., Chételat, J., Constant, P., Evans, M., Ferrari, C., Gantner, N., Johnson, M. S., Kirk, J., Kroer, N., Larose, C., Lean, D., Nielsen, T. G. & 7 others, Poissant, L., Rognerud, S., Skov, H., Sørensen, Søren Johannes, Wang, F., Wilson, S. & Zdanowicz, C. M., 2012, In: Environmental Chemistry (Online). 9, 4, p. 321-355 35 p.

    Research output: Contribution to journal › Review › Research › peer-review

  20. Published

    The fate of indigenous microbiota, starter cultures, Escherichia coli, Listeria innocua and Staphylococcus aureus in Danish raw milk and cheeses determined by pyrosequencing and quantitative real time (qRT)-PCR

    Masoud, W. M. H., Vogensen, Finn Kvist, Lillevang, S., Abu Al-Soud, W., Sørensen, Søren Johannes & Jakobsen, M., 2012, In: International Journal of Food Microbiology. 153, 1-2, p. 192-202 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    The evolution, phylogeny, and diversity of the monocotyledons - A Danish research project.

    Ågesen, L., Asmussen, C., Frederiksen, S. E., Pedersen, L. B., Rasmussen, Finn N., Johansen, B. B. & Seberg, Ole, 1998. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  22. Published

    The evolution of virulence in Pseudomonas aeruginosa during chronic wound infection

    Vanderwoude, J., Fleming, D., Azimi, S., Trivedi, Urvish, Rumbaugh, K. P. & Diggle, S. P., 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1937, 10 p., 20202272.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    The environmental contribution to the dissemination of carbapenem and (fluoro)quinolone resistance genes by discharged and reused wastewater effluents: The role of cellular and extracellular DNA

    Oliveira, M., Nunes, M., Barreto Crespo, M. T. & Silva, A. F., 2020, In: Water Research. 182, 13 p., 116011.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    The emergence of HIV/AIDS in the Americas and beyond.

    Gilbert, M Thomas P, Rambaut, A., Wlasiuk, G., Spira, T. J., Pitchenik, A. E. & Worobey, M., 2007, In: Proceedings of the National Academy of Science of the United States of America. 104, 47, p. 18566-70 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The effect of L. acidophilus NCFM intake on insulin sensitivity and gut microbiota: a randomized placebo-controlled trial

    Larsen, Nadja, Andreasen, A. S., Pedersen-Skovsgaard, T., Møller, K., van den Berg, F. W. J., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Pedersen, Bente Klarlund & Jakobsen, M., Sep 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research

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