Microbiology

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  1. Published

    Snow microbiome functional analyses reveal novel aspects of microbial metabolism of complex organic compounds

    Zhu, C., Miller, M., Lusskin, N., Bergk Pinto, B., Maccario, Lorrie, Häggblom, M., Vogel, T., Larose, C. & Bromberg, Y., 2020, In: MicrobiologyOpen. 9, 9, e1100.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Simultaneous pyrosequencing of the 16S rRNA, IncP-1 trfA, and merA genes

    Holmsgaard, P. N., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2013, In: Journal of Microbiological Methods. 95, 2, p. 280-284 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Similar sponge-associated bacteria can be acquired via both vertical and horizontal transmission

    Sipkema, D., de Caralt, S., Morillo, J. A., Abu Al-Soud, W., Sørensen, Søren Johannes, Smidt, H. & Uriz, M. J., 2015, In: Environmental Microbiology. 17, 10, p. 3807-3821 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Short- and longterm impacts of Acacia longifolia invasion on belowground processes of a Mediterranean coastal dune ecosystem

    Marchante, E., Kjøller, A., Struwe, Sten & Freitas, H., 2008, In: Agriculture, Ecosystems & Environment. Applied Soil Ecology. 40, 2, p. 210-217 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: a double-blind, randomized, placebo-controlled trial

    Wei, S., Mortensen, M. S., Stokholm, Jakob, Brejnrod, A. D., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Trivedi, Urvish, Bisgaard, H. & Sørensen, Søren Johannes, 2018, In: EBioMedicine. 38, p. 265-272

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Short and Long-Term Controls on Active Layer and Permafrost Carbon Turnover Across the Arctic

    Faucherre, S., Jørgensen, C. J., Blok, D., Weiss, N., Siewert, M. B., Bang-Andreasen, T., Hugelius, G., Kuhry, P. & Elberling, Bo, 2018, In: Journal of Geophysical Research: Biogeosciences. 123, 2, p. 372-390 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Shifts in the microbial community structure explain the response of soil respiration to land-use change but not to climate warming

    Nazaries, L., Tottey, W., Robinson, L., Khachane, A., Abu Al-Soud, W., Sørensen, Søren Johannes & Singh, B. K., 2015, In: Soil Biology & Biochemistry. 89, p. 123-134 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year

    Dealtry, S., Holmsgaard, P. N., Dunon, V., Jechalke, S., Ding, G., Kroegerrecklenfort, E., Heuer, H., Hansen, Lars Hestbjerg, Springael, D., Zuehlke, S., Sørensen, Søren Johannes & Smalla, K., 2014, In: Applied and Environmental Microbiology. 80, 13, p. 4012-4020 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Sequentially aerated membrane biofilm reactors for autotrophic nitrogen removal: microbial community composition and dynamics

    Pellicer i Nàcher, C., Franck, S., Gülay, A., Ruscalleda, M., Terada, A., Abu Al-Soud, W., Hansen, M. A., Sørensen, Søren Johannes & Smets, B. F., 2014, In: Microbial Biotechnology. 7, 1, p. 32-43 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Sequencing of IncX-plasmids suggests ubiquity of mobile forms of a biofilm-promoting gene cassette recruited from Klebsiella pneumoniae

    Burmølle, Mette, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012, In: PLOS ONE. 7, 7, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Sequence of a SCCmec type VII (former VT) found in Danish ST8-t024-PVLneg CA-MRSA

    Boye, K., Pulis, S., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Westh, Henrik T., Apr 2011.

    Research output: Contribution to conference › Poster › Research

  12. Published

    Sequence and comparative analysis of Lactococcus lactis c2 dairy bacteriphages with different thermal inactivation

    Vogensen, Finn Kvist, Nielsen, C. L. M., Bashir, A., Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Heller, K. J., Sørensen, Søren Johannes & Knoechel, Susanne, Aug 2011.

    Research output: Contribution to conference › Poster › Research

  13. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Jacobsen, S., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2014, In: International Journal of Food Microbiology. 176, p. 29-37 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  15. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  16. Published

    Selection for Cu-tolerant bacterial communities with altered composition, but unaltered richness, via long-term Cu exposure

    Berg, J., Brandt, Kristian Koefoed, Abu Al-Soud, W., Holm, Peter Engelund, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Nybroe, O., 2012, In: Applied and Environmental Microbiology. 78, 20, p. 7438-7446 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Selection and propagation of IncP conjugative plasmids following long-term anthropogenic metal pollution in river sediments

    Cyriaque, V., Jacquiod, S. J. A., Riber, Leise, Abu Al-Soud, W., Gillan, D. C., Sørensen, Søren Johannes & Wattiez, R., 2020, In: Journal of Hazardous Materials. 382, 10 p., 121173.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Second generation sequencing for elucidating the diversity of bacteria and plasmids in soil

    Holmsgaard, P. N., 2013, Department of Biology, Faculty of Science, University of Copenhagen. 160 p.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    Seasonality of denitrification in water-logged alder stands

    Struwe, Sten & Kjøller, Annelise Helene, Oct 1990, In: Plant and Soil. 128, 1, p. 109-113 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Rose replant disease: detailed analyses of plant reactions, root endophytes and rhizosphere microbial communities

    Baumann, A., Yim, B., Grunewaldt-Stöcker, G., Liu, B., Beerhues, L., Sapp, M., Nesme, Joseph, Sørensen, Søren Johannes, Smalla, K. & Winkelmann, T., 2020, In: Acta Horticulturae. 1283, p. 97-104 8 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  21. Published

    Root exposure to apple replant disease soil triggers local defense response and rhizoplane microbiome dysbiosis

    Balbín-Suárez, A., Jacquiod, S., Rohr, A. D., Liu, B., Flachowsky, H., Winkelmann, T., Beerhues, L., Nesme, Joseph, Sørensen, Søren Johannes, Vetterlein, D. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 4, 14 p., fiab031.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Rodskud hos orkideer

    Andersen, T. F. & Johansen, B. B., 1986, In: Orkideer. p. 161-163

    Research output: Contribution to journal › Journal article › Communication

  23. Published

    Risk factors for and pregnancy outcomes after SARS-CoV-2 in pregnancy according to disease severity: A nationwide cohort study with validation of the SARS-CoV-2 diagnosis

    Aabakke, A. J. M., Petersen, T. G., Wøjdemann, K., Ibsen, M. H., Jonsdottir, F., Rønneberg, E., Andersen, C. S., Hammer, A., Clausen, T. D., Milbak, J., Burmester, L., Zethner, R., Lindved, B., Thorsen-Meyer, A., Khalil, M. R., Henriksen, B., Jønsson, L., Andersen, L. L. T., Karlsen, K. K., Pedersen, M. L. & 19 others, Hedermann, G., Vestgaard, M., Thisted, D., Fallesen, A. N., Johansson, J. N., Møller, D. C., Dubietyte, G., Andersson, C. B., Farlie, R., Skaarup Knudsen, A., Hansen, L., Hvidman, L., Sørensen, A. N., Rathcke, S. L., Rubin, K. H., Petersen, L. K., Jørgensen, J. S., Krebs, Lone & Bliddal, M., 2023, In: Acta Obstetricia et Gynecologica Scandinavica. 102, 3, p. 282–293 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Rise and fall of the Beringian steppe bison

    Shapiro, B., Drummond, A. J., Rambaut, A., Wilson, M. C., Matheus, P. E., Sher, A. V., Pybus, O. G., Gilbert, M. T. P., Barnes, I., Binladen, J., Willerslev, E., Hansen, A. J., Baryshnikov, G. F., Burns, J. A., Davydov, S., Driver, J. C., Froese, D. G., Harington, C. R., Keddie, G., Kosintsev, P. & 7 others, Kunz, M. L., Martin, L. D., Stephenson, R. O., Storer, J., Tedford, R., Zimov, S. & Cooper, A., 2004, In: Science. 306, 5701, p. 1561-5

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Ringbærerne, en ny dyrerække

    Willerslev, Eske, Sørensen, Martin Vinther & Hansen, A. J., 1998, In: Naturens Verden. 1, p. 15-25

    Research output: Contribution to journal › Journal article › Research

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