- Published
Risk factors for and pregnancy outcomes after SARS-CoV-2 in pregnancy according to disease severity: A nationwide cohort study with validation of the SARS-CoV-2 diagnosis
Aabakke, A. J. M., Petersen, T. G., Wøjdemann, K., Ibsen, M. H., Jonsdottir, F., Rønneberg, E., Andersen, C. S., Hammer, A., Clausen, T. D., Milbak, J., Burmester, L., Zethner, R., Lindved, B., Thorsen-Meyer, A., Khalil, M. R., Henriksen, B., Jønsson, L., Andersen, L. L. T., Karlsen, K. K., Pedersen, M. L. & 19 others, , 2023, In: Acta Obstetricia et Gynecologica Scandinavica. 102, 3, p. 282–293 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparison of aerobic and anaerobic [3H]leucine incorporation assays for determining pollution-induced bacterial community tolerance in copper-polluted, irrigated soils
Aaen, K. N., Holm, Peter Engelund, Priemé, Anders, Hung, N. N. & Brandt, Kristian Koefoed, 2011, In: Environmental Toxicology and Chemistry. 30, 3, p. 588-595 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oropharyngeal Microbiota Clusters in Children with Asthma or Wheeze Associate with Allergy, Blood Transcriptomic Immune Pathways, and Exacerbation Risk
U-BIOPRED Study Group, U. S. G., 2023, In: American Journal of Respiratory and Critical Care Medicine. 208, 2, p. 142-154 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A novel and affordable bioaugmentation strategy with microbial extracts to accelerate the biodegradation of emerging contaminants in different media
Aguilar-Romero, I., van Dillewijn, P., Nesme, Joseph, Sørensen, Søren Johannes, Nogales, R., Delgado-Moreno, L. & Romero, E., 2022, In: Science of the Total Environment. 834, 10 p., 155234.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacteria in the first void urine of urethritis patients and healthy controls analysed by 454 high throughput senquencing
Ahrens, P., Frølund, M., Abu Al-Soud, W., Wikström, A., Lidbrink, P., Cullberg, M., Sørensen, Søren Johannes & Jensen, J. S., 2012.Research output: Contribution to conference › Poster › Research
- Published
- Published
The Biological Time Machine - Biological responses to multiple environmental and climatic changes: Environment and Stress, Ph.d. symposium at KVL October 2006
Albert, K., Ro-Poulsen, Helge, N. Mikkelsen, T., Michelsen, Anders, Beier, C., Jonasson, S. E., Ambus, Per Lennart, Schmidt, Inger Kappel, Holmstrup, M., Priemé, Anders & Christensen, Søren, 2006.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Ambient UV-B radiation reduces PSII performance and net photosynthesis in high Arctic Salix arctica
Albert, K. R., Mikkelsen, T. N., Ro-Poulsen, Helge, Arndal, M. F. & Michelsen, Anders, 2011, In: Environmental and Experimental Botany. 73, p. 10-18 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Relatedness mapping and tracts of relatedness for genome-wide data in the presence of linkage disequilibrium
Albrechtsen, Anders, Korneliussen, Thorfinn Sand, Moltke, Ida, van Overseem Hansen, T., Nielsen, Finn Cilius & Nielsen, Rasmus, 2009, In: Genetic Epidemiology. 33, 3, p. 266-274Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Bayesian multilocus association method: allowing for higher-order interaction in association studies
Albrechtsen, Anders, Castella, S., Andersen, G., Hansen, T., Pedersen, O. & Nielsen, Rasmus, 2007, In: Genetics. 176, 2, p. 1197-208 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microsatellite analysis of the natterjack toad (Bufo calamita) in Denmark: populations are islands in a fragmented landscape
Allentoft, Morten Erik, Siegismund, Hans Redlef, Briggs, L. & Andersen, L. W., 2009, In: Conservation Genetics. 10, 1, p. 15-28Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analysis of cell-type-specific gene expression during mouse spermatogenesis
Almstrup, Kristian, Nielsen, J. E., Hansen, M. A., Tanaka, M., Skakkebæk, Niels Erik & Leffers, H., Jun 2004, In: Biology of Reproduction. 70, 6, p. 1751-1761 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The feather moss Hylocomium splendens affects the transcriptional profile of a symbiotic cyanobacterium in relation to acquisition and turnover of key nutrients
Alvarenga, Danillo Oliveira, Priemé, Anders & Rousk, Kathrin, 2024, In: Microbial Ecology. 87, 11 p., 49.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combined use of Bacteriophage K and a novel Bacteriophage to reduce Staphylococcus aureus biofilm formation
Alves, D. R., Gaudion, A., Bean, J. E., Esteban, P. P., Arnot, T. C., Harper, D. R., Kot, Witold, Hansen, Lars Hestbjerg, Enright, M. C. & Jenkins, A. T. A., 2014, In: Applied and Environmental Microbiology. 80, 21, p. 6694-6703 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-throughput screening alternative to crystal violet biofilm assay combining fluorescence quantification and imaging
Amador Hierro, Cristina Isabel, Stannius, R. O., Røder, Henriette Lyng & Burmølle, Mette, 2021, In: Journal of Microbiological Methods. 190, 5 p., 106343.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Combined effects of drought, temperature and CO2 on GHG emissions from temperate shrub-land
Ambus, Per Lennart, Priemé, Anders, S. Carter, M., Albert, K., S. Larsen, K., Andersson, M. & Beier, C., 2007.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Denitrification and N2O losses in a heath-land under changing climate conditions
Ambus, Per Lennart, Priemé, Anders, S. Carter, M., Albert, K., S. Larsen, K., Andersson, M. & Beier, C., 2007.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Assessment of CH4 and N2O fluxes in a Danish beech (Fagus sylvatica) forest and an adjacent N-fertilised barley (Hordeum vulgare) field: effects of sewage sludge amendments
Ambus, Per Lennart, Jensen, J. M., Priemé, Anders, Pilegaard, K. & Kjøller, A., 2001, In: Nutrient Cycling in Agroecosystems. 60, 1-3, p. 15-21 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A combined DNA-microsatellite and isozyme analysis of the population structure of the harbour porpoise in Danish waters and west Greenland
Andersen, L. W., Holm, L. E., Siegismund, Hans Redlef, Clausen, B., Kinze, C. C. & Loeschcke, V., 1997, In: Heredity. 78, 3, p. 270-276 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specificity and stability of the Acromyrmex–Pseudonocardia symbiosis
Andersen, Sandra Breum, Hansen, Lars Hestbjerg, Sapountzis, P., Sørensen, Søren Johannes & Boomsma, Jacobus J., 2013, In: Molecular Ecology. 22, 16, p. 4307-4321 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rodskud hos orkideer
Andersen, T. F. & Johansen, B. B., 1986, In: Orkideer. p. 161-163Research output: Contribution to journal › Journal article › Communication
- Published
Fate of CMY-2-Encoding Plasmids Introduced into the Human Fecal Microbiota by Exogenous Escherichia coli
Anjum, M., Madsen, Jonas Stenløkke, Nesme, Joseph, Jana, B., Wiese, M., Jasinskyte, D., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Dalsgaard, Anders, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, 2019, In: Antimicrobial Agents and Chemotherapy. 63, 5, 13 p., e02528-18.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A culture-independent method for studying transfer of IncI1 plasmids from wild-type Escherichia coli in complex microbial communities
Anjum, M., Madsen, Jonas Stenløkke, Espinosa-Gongora, C., Jana, B., Wiese, M., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, Sep 2018, In: Journal of Microbiological Methods. 152, p. 18-26 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
To assemble or not to resemble - A validated Comparative Metatranscriptomics Workflow (CoMW)
Anwar, M. Z., Lanzen, A., Bang-Andreasen, T. & Jacobsen, C. S., 2019, In: GigaScience. 8, 8, 10 p., giz096.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extreme genetic differences among populations of Gazella granti, Grant's gazelle in Kenya
Arctander, P., Kat, P. W., Aman, R. A. & Siegismund, Hans Redlef, 1996, In: Heredity. 76 ( Pt 5), p. 465-75 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population genetics of Kenyan impalas–consequences for conservation
Arctander, P., Kat, P. W., Aman, R. A. & Siegismund, Hans Redlef, 1996, Molecular Genetic Approaches in Conservation. Smith, T. B. & Wayne, R. K. (eds.). Oxford: Oxford University Press, p. 399-412Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Optical dating of perennially frozen deposits associated with preserved ancient plant and animal DNA in north-central Siberia
Arnold, L. J., Roberts, R. G., Macphee, R. D. E., Willerslev, Eske, Tikhonov, A. N. & Brock, F., 2008, In: Quaternary Geochronology. 3, 1-2, p. 114-136 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unexpected diversity among small-scale sample replicates of defined plant root compartments
Attia, S., Russel, J., Mortensen, M. S., Madsen, Jonas Stenløkke & Sørensen, Søren Johannes, 2022, In: ISME Journal. 16, 4, p. 997-1003 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Patterns and Processes of the Microbiome Assembly at a Small-Scale of the Plant Root Microenvironments: Study Case on the Wheat and Faba Bean Root Systems
Attia, S. M. H., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 132 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The effect of ancient DNA damage on inferences of demographic histories
Axelsson, E., Willerslev, Eske, Gilbert, M Thomas P & Nielsen, Rasmus, 2008, In: Molecular Biology and Evolution. 25, 10, p. 2181-7 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Impact of long-term agricultural management practices on soil prokaryotic communities
Babin, D., Deubel, A., Jacquiod, S. J. A., Sørensen, Søren Johannes, Geistlinger, J., Grosch, R. & Smalla, K., 2019, In: Soil Biology & Biochemistry. 129, p. 17-28Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distinct rhizomicrobiota assemblages and plant performance in lettuce grown in soils with different agricultural management histories
Babin, D., Sommermann, L., Chowdhury, S. P., Behr, J. H., Sandmann, M., Neumann, G., Nesme, Joseph, Sørensen, Søren Johannes, Schellenberg, I., Rothballer, M., Geistlinger, J., Smalla, K. & Grosch, R., 2021, In: FEMS Microbiology Ecology. 97, 4, 21 p., fiab027.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A taxonomic revision of the genus Hystrix (Triticeae, Poaceae)
Baden, C., Frederiksen, S. E. & Seberg, Ole, 1997, In: Nordic Journal of Botany. 17, 5, p. 449-467 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Phenotypic variability in bioprocessing conditions can be tracked on the basis of on-line flow cytometry and fits to a scaling law
Baert, J., Kinet, R., Brognaux, A., Delepierre, A., Telek, S., Sørensen, Søren Johannes, Riber, Leise, Fickers, P. & Delvigne, F., 2015, In: Biotechnology Journal. 10, 8, p. 1316-1325 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Persistence Mechanisms of Conjugative Plasmids
Bahl, M. I., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, Horizontal Gene Transfer: Genomes in Flux. Gogarten, M. B., Gogarten, J. P. & Olendzenski, L. C. (eds.). Humana Press, Vol. 532. p. 73-102 (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
In Vivo Detection and Quantification of Tetracycline by Use of a Whole-Cell Biosensor in the Rat Intestine
Bahl, M. I., Hansen, Lars Hestbjerg, Licht, T. R. & Sørensen, Søren Johannes, 2004, In: Antimicrobial Agents and Chemotherapy. 48, 4, p. 1112-1117Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantification of plasmid loss in Escherichia coli cells by use of flow cytometry
Bahl, M. I., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2004, In: FEMS Microbiology Letters. 232, 1, p. 45-49Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Construction and Use of Flow Cytometry Optimized Plasmid-Sensor Strains: Genomes in Flux
Bahl, M. I., Oregaard, G., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2009, Horizontal Gene Transfer. Gogarten, M. B., Gogarten, J. P. & Olendzenski, L. C. (eds.). Humana Press, Vol. 532. p. 257-268 (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
All IncP-1 plasmid subgroups, including the novel e subgroup, are prevalent in the influent of a Danish wastewater treatment plant
Bahl, M. I., Burmølle, Mette, Meisner, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Plasmid. 62, 2, p. 134-139 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effect of Tetracycline on Transfer and Establishment of the Tetracycline-Inducible Conjugative Transposon Tn916 in the Guts of Gnotobiotic Rats
Bahl, M. I., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Licht, T. R., 2004, In: Applied and Environmental Microbiology. 70, 2, p. 758-764Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Root exposure to apple replant disease soil triggers local defense response and rhizoplane microbiome dysbiosis
Balbín-Suárez, A., Jacquiod, S., Rohr, A. D., Liu, B., Flachowsky, H., Winkelmann, T., Beerhues, L., Nesme, Joseph, Sørensen, Søren Johannes, Vetterlein, D. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 4, 14 p., fiab031.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring microbial determinants of apple replant disease (ARD): a microhabitat approach under split-root design
Balbín-Suárez, A., Lucas, M., Vetterlein, D., Sørensen, Søren Johannes, Winkelmann, T., Smalla, K. & Jacquiod, S., 2020, In: FEMS Microbiology Ecology. 96, 12, 12 p., fiaa211.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prevalence estimates of antibodies towards foot-and-mouth disease virus in small ruminants in Uganda
Balinda, S. N., Tjørnehøj, K., Muwanika, V. B., Sangula, A. K., Mwiine, F. N., Ayebazibwe, C., Masembe, C., Siegismund, Hans Redlef & Alexandersen, S., 2009, In: Transboundary and Emerging Diseases. 56, 9-10, p. 362-371 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Flygtninge er mennesker i krise.
Bang-Achton, I., Gollin, J., Mide, A., Kjøller, Annelise Helene & Andersen, L., 12 Mar 1986, In: Sygeplejersken. 86, 11, p. 18 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Potential microbial contamination during sampling of permafrost soil assessed by tracers
Bang-Andreasen, T., Schostag, M. D., Priemé, Anders, Elberling, Bo & Jacobsen, C. S., 2017, In: Scientific Reports. 7, 11 p., 43338.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, Regin, Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Total RNA sequencing reveals multilevel microbial community changes and functional responses to wood ash application in agricultural and forest soil
Bang-Andreasen, T., Anwar, M. Z., Lanzén, A., Kjøller, Rasmus, Rønn, Regin, Ekelund, Flemming & Jacobsen, C. S., 2020, In: FEMS Microbiology Ecology. 96, 3, 13 p., fiaa016.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The murine lung microbiome in relation to the intestinal and vaginal bacterial communities
Barfod, K. K., Roggenbuck, M., Hansen, Lars Hestbjerg, Schjørring, S., Larsen, S. T., Sørensen, Søren Johannes & Krogfelt, K. A., 2013, In: B M C Microbiology. 13, 12 p., 303.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Alterations of the murine gut microbiome in allergic airway disease are independent of surfactant protein D
Barfod, K. K., Roggenbuck, M., Al-Shuweli, S., Fakih, D., Sørensen, Søren Johannes & Sørensen, G. L., Mar 2017, In: Heliyon. 3, 3, 19 p., e00262.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Unexpected Location of the Arginine Catabolic Mobile Element (ACME) in a USA300-Related MRSA Strain
Bartels, Mette Damkjær, Hansen, Lars Hestbjerg, Boye, K., Sørensen, Søren Johannes & Westh, Henrik T., 2011, In: P L o S One. 6, 1, 5 p., e16193.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rose replant disease: detailed analyses of plant reactions, root endophytes and rhizosphere microbial communities
Baumann, A., Yim, B., Grunewaldt-Stöcker, G., Liu, B., Beerhues, L., Sapp, M., Nesme, Joseph, Sørensen, Søren Johannes, Smalla, K. & Winkelmann, T., 2020, In: Acta Horticulturae. 1283, p. 97-104 8 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Long-term conservation tillage with reduced nitrogen fertilization intensity can improve winter wheat health via positive plant–microorganism feedback in the rhizosphere
Behr, J. H., Kuhl-Nagel, T., Sommermann, L., Moradtalab, N., Chowdhury, S. P., Schloter, M., Windisch, S., Schellenberg, I., Maccario, Lorrie, Sørensen, Søren Johannes, Rothballer, M., Geistlinger, J., Smalla, K., Ludewig, U., Neumann, G., Grosch, R. & Babin, D., 2024, In: FEMS Microbiology Ecology. 100, 2, 18 p., fiae003.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biofilm growth and near infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina
Behrendt, L., Schrameyer, V., Qvortrup, Klaus, Neves Lundin, A. L., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2012, In: Applied and Environmental Microbiology. 78, 11, p. 3896-3904 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
New ecological niches and habitats for Chlorophyll d- containing cyanobacteria
Behrendt, L., Chen, M., Larkum, A. W. D., Ralph, P. J., Sørensen, Søren Johannes, Trampe, E. & Kühl, Michael, 2010.Research output: Contribution to conference › Poster › Research
- Published
Endolithic chlorophyll d-containing phototrophs
Behrendt, L., Larkum, A. W. D., Norman, A., Qvortrup, Klaus, Chen, M., Ralph, P., Sørensen, Søren Johannes, Trampe, Erik & Kühl, Michael, 2011, In: I S M E Journal. 5, 6, p. 1072-6 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina
Behrendt, L., Raina, J., Lutz, A., Kot, W., Albertsen, M., Nielsen, P. H., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2018, In: I S M E Journal. 12, p. 556–567 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella
Behrendt, L., Larkum, A. W. D., Trampe, Erik, Norman, A., Sørensen, Søren Johannes & Kühl, Michael, 2012, In: I S M E Journal. 6, p. 1222-1237 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chlorophyll f-driven photosynthesis in a cavernous cyanobacterium
Behrendt, L., Brejnrod, A. D., Schliep, M., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2015, In: The ISME Journal. 9, 9, p. 2108-2111 4 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Rapid TaqMan-based quantification of chlorophyll d-containing cyanobacteria in the genus Acaryochloris
Behrendt, L., Nielsen, J. L., Sørensen, Søren Johannes, Larkum, A. W. D., Winther, Jakob R. & Kühl, Michael, 2014, In: Applied and Environmental Microbiology. 80, 10, p. 3244-3249 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Impacts of climate change on terrestrial ecosystem functioning: an overview
Beier, C., Ambus, P., Arndal, M. F., Christensen, S., Holmstrup, M., Larsen, K. S., Michelsen, A., Mikkelsen, T. N., Priemé, Anders, Schmidt, Inger Kappel & Pilegaard, K., 2015, Kgs. Lyngby: DTU. 55 p.Research output: Book/Report › Report › Research
- Published
Fluxes of NO3-, NH4+, NO, NO2, and N2O in an old danish beech forest
Beier, Claus, Rasmussen, L., Pilegaard, K., Ambus, Per Lennart, Mikkelsen, T. N., Jensen, N. O., Kjøller, Annelise Helene, Priemé, Anders & Ladekarl, U. L., 2001, In: Water, Air, and Soil Pollution: Focus. 1, p. 187-195Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exposure of consumers to substandard antibiotics from selected authorised and unauthorised medicine sales outlets in Ghana
Bekoe, S. O., Ahiabu, M. A., Orman, E., Tersbøl, Britt Pinkowski, Adosraku, R. K., Hansen, M., Frimodt-Møller, N. & Styrishave, Bjarne, 2020, In: Tropical Medicine and International Health. 25, 8, p. 962-975 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut microbiota composition is correlated to grid floor induced stress and behavior in the BALB/c mouse
Bendtsen, K. M. B., Krych, Lukasz, Sørensen, Dorte Bratbo, Pang, W., Nielsen, Dennis Sandris, Josefsen, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Hansen, Axel Kornerup, 2012, In: P L o S One. 7, 10, 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity and PAH catabolic genes tracking spatial heterogeneity of PAH concentrations
Bengtsson, G., Törneman, N., Lipthay, J. R. D. & Sørensen, Søren Johannes, 2013, In: Microbial Ecology. 65, 1, p. 91-100 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial-temporal variations of nitrous oxide emissions in coffee agroforestry systems in Costa Rica
Bentzon-Tarp, A., Helgadóttir, D., Van den Meersche, K., Gay, F., Priemé, Anders, Roupsard, O., Mages, C. & Elberling, Bo, 2023, In: Agriculture, Ecosystems and Environment. 343, 11 p., 108257.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disease-induced assemblage of a plant-beneficial bacterial consortium
Berendsen, R. L., Vismans, G., Yu, K., Song, Y., de Jonge, R., Burgman, W. P., Burmølle, Mette, Herschend, J., Bakker, P. A. H. M. & Pieterse, C. M. J., 2018, In: I S M E Journal. 12, p. 1496-1507 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Selection for Cu-tolerant bacterial communities with altered composition, but unaltered richness, via long-term Cu exposure
Berg, J., Brandt, Kristian Koefoed, Abu Al-Soud, W., Holm, Peter Engelund, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Nybroe, O., 2012, In: Applied and Environmental Microbiology. 78, 20, p. 7438-7446 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of genetic determinants of extended-spectrum cephalosporinases (ESCs) in Escherichia coli isolates from Danish and imported poultry meat
Bergenholtz, R. D., Jørgensen, M. S., Hansen, Lars Hestbjerg, Jensen, L. B. & Hasman, H., 2009, In: Journal of Antimicrobial Chemotherapy. 64, 1, p. 207-209 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High robustness of soil bacteria and funghi to multifactorial climate change manipulations
Bergmark, L., Haugwitz-Hardenberg-Reventlow, M. S., Sørensen, Søren Johannes & Priemé, Anders, 2012.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Soil bacterial community responses to global changes
Bergmark, L., 2013, Department of Biology, Faculty of Science, University of Copenhagen. 167 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
- Published
Assessment of the specificity of Burkholderia and Pseudomonas qPCR assays for detection of these genera in soil using 454 pyrosequencing
Bergmark, L., Poulsen, P. H. B., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: F E M S Microbiology Letters. 333, 1, p. 77-84 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disruption of ATCSLD5 results in reduced growth, reduced xylan and homogalacturonan synthase activity and altered xylan occurrence in Arabidopsis
Bernal Giraldo, A. J., Jensen, J. K., Harholt, J., Sørensen, S. O., Moller, I. E., Blaukopf, C., Johansen, B. B., Delotto, R., Pauly, M., Scheller, H. V. & Willats, W. G. T., 2007, In: Plant Journal. 52, 5, p. 791-802 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of Extracellular Biosurfactants Expressed by a Pseudomonas putida Strain Isolated from the Interior of Healthy Roots from Sida hermaphrodita Grown in a Heavy Metal Contaminated Soil
Bernat, P., Nesme, Joseph, Paraszkiewicz, K., Schloter, M. & Płaza, G., 2019, In: Current Microbiology. 76, 11, p. 1320-1329 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Importance of microbial communities at the root-soil interface for extracellular polymeric substances and soil aggregation in semiarid grasslands
Bettermann, A., Zethof, J. H. T., Babin, D., Cammeraat, E. L. H., Solé-Benet, A., Lázaro, R., Luna, L., Nesme, Joseph, Sørensen, Søren Johannes, Kalbitz, K., Smalla, K. & Vogel, C., 2021, In: Soil Biology & Biochemistry. 159, 14 p., 108301.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of diversity of plasmids carrying the blaTEM-52 gene
Bielak, E. M., Bergenholtz, R. D., Jørgensen, M. S., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Hasman, H., 2011, In: Journal of Antimicrobial Chemotherapy. 66, 11, p. 2465-74 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Assessing the fidelity of ancient DNA sequences amplified from nuclear genes
Binladen, J., Wiuf, C. H., Gilbert, M Thomas P, Bunce, M., Barnett, R., Larson, G., Greenwood, A. D., Haile, James Seymour, Ho, S. Y. W., Hansen, Anders Johannes & Willerslev, Eske, 2006, In: Genetics. 172, 2, p. 733-41Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing.
Binladen, J., Gilbert, M Thomas P, Bollback, J. P., Panitz, F., Bendixen, C., Nielsen, Rasmus & Willerslev, Eske, 2007, In: PLoS ONE. 2, 2, p. e197Research output: Contribution to journal › Journal article › Research › peer-review
- Published
5'-tailed sequencing primers improve sequencing quality of PCR products.
Binladen, J., Gilbert, M Thomas P, Campos, P. F. & Willerslev, Eske, 2007, In: BioTechniques. 42, 2, p. 174-176Research output: Contribution to journal › Journal article › Research › peer-review
- Published
800,000 year old mammoth DNA, modern elephant DNA or PCR artefact?
Binladen, J., Gilbert, M Thomas P & Willerslev, Eske, 2007, In: Biology Letters. 3, 1, p. 55-6; discussion 60-3Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pseudomonas aeruginosa tolerance to tobramycin, hydrogen peroxide and polymorphonuclear leukocytes is quorum-sensing dependent
Bjarnsholt, Thomas, Jensen, Peter Østrup, Burmølle, Mette, Hentzer, M., Haagensen, J. A. J., Hougen, H. P., Calum, H., Madsen, K. G., Moser, Claus Ernst, Molin, S., Høiby, Niels & Givskov, Michael, Feb 2005, In: Microbiology. 151, Pt 2, p. 373-83 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of Lactobacillus paracasei subsp. paracasei L. casei W8® on blood levels of triacylglycerol is independent of colonisation
Bjerg, A. T., Sørensen, M. B., Krych, Lukasz, Hansen, Lars Hestbjerg, Astrup, A., Kristensen, M. B. & Nielsen, Dennis Sandris, 2015, In: Beneficial Microbes. 6, 3, p. 263-269 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Manure and Doxycycline Affect the Bacterial Community and Its Resistome in Lettuce Rhizosphere and Bulk Soil
Blau, K., Jacquiod, S., Sørensen, Søren Johannes, Su, J., Zhu, Y., Smalla, K. & Jechalke, S., 2019, In: Frontiers in Microbiology. 10, p. 1-15 725.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Growth and molting in epizoic pedunculate barnacles genus Octolasmis (Crustacea: Thecostraca: Cirripedia: Thoracica).
Høeg, Jens Thorvald, Glenner, Henrik & Høeg, Jens Thorvald, 2004, In: Journal of Morphology. 260, 2, p. 154-64 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Estimation of 2N(e)s from temporal allele frequency data
Bollback, J. P., York, T. L. & Nielsen, Rasmus, 2008, In: Genetics. 179, p. 497-502 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Naturens orden - klassifikation og udviklingshistorie
Bonde, N. & Rasmussen, Finn N., 1985, Naturens historiefortællere. Bonde, N., Hoffmeyer, J. & Stangerup, H. (eds.). 1. ed. København, Vol. 1. p. 331-364 34 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication
- Published
You don’t have the guts: a diverse set of fungi survive passage through Macrotermes bellicosus termite guts [+ correction]
Bos, N., Guimaraes, L., Palenzuela, R., Renelies-Hamilton, J., Maccario, Lorrie, Silue, S. K., Koné, N. A. & Poulsen, Michael, 2020, In: BMC Evolutionary Biology. 20, 11 p., 163.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mapping of HNF4alpha target genes in intestinal epithelial cells
Boyd, M., Bressendorff, Simon, Moller, J., Olsen, Jørgen & Troelsen, J., 2009, In: BMC Gastroenterology. 9, 1, p. 68Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Assessing the evolutionary impact of amino acid mutations in the human genome
Boyko, A. R., Williamson, S. H., Indap, A. R., Degenhardt, J. D., Hernandez, R. D., Lohmueller, K. E., Adams, M. D., Schmidt, S., Sninsky, J. J., Sunyaev, S. R., White, T. J., Nielsen, Rasmus, Clark, A. G. & Bustamante, C. D., 2008, In: PLoS Genetics. 4, 5, p. e1000083Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcriptome-Stable Isotope Probing Provides Targeted Functional and Taxonomic Insights Into Microaerobic Pollutant-Degrading Aquifer Microbiota
Bradford, L. M., Vestergaard, G., Táncsics, A., Zhu, B., Schloter, M. & Lueders, T., 2018, In: Frontiers in Microbiology. 9, 13 p., 2696.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi)
Brandon Matheny, P., Wang, Z., Binder, M., Curtis, J. M., Lim, Y. W., Nilsson, R. H., Hughes, K. W., Hofstetter, V., Ammirati, J. F., Schoch, C. L., Langer, E., Langer, G., McLaughlin, D. J., Wilson, A. W., Frøslev, T., Ge, Z. W., Kerrigan, R. W., Slot, J. C., Yang, Z. L., Baroni, T. J. & 6 others, , 2007, In: Molecular Phylogenetics and Evolution. 43, 2, p. 430-451 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The impact of exercise training and resveratrol supplementation on gut microbiota composition in high-fat diet fed mice
Brandt, N., Kotowska, D., Kristensen, C. M., Olesen, J., Lützhøft, Ditte Olsen, Halling, Jens Frey, Hansen, M., Al-Soud, W. A., Hansen, Lars Hestbjerg, Kiilerich, P. & Pilegaard, Henriette, 2018, In: Physiological Reports. 6, 20, p. 1-11 e13881.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Knockout of Arabidopsis accelerated-cell-death11 encoding a sphingosine transfer protein causes activation of programmed cell death and defense.
Brodersen, P., Petersen, Morten, Pike, H. M., Olszak, B., Skov, Søren, Odum, N., Jørgensen, L. B., Brown, R. E. & Mundy, J., 2002, In: Genes & Development. 16, 4, p. 490-502 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A low-cost, multiplexable, automated flow cytometry procedure for the characterization of microbial stress dynamics in bioreactors
Brognaux, A., Han, S., Sørensen, Søren Johannes, Lebeau, F., Thonart, P. & Delvigne, F., 2013, In: Microbial Cell Factories. 12, 100, 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The genome of Hyperthermus butylicus: a sulfur-reducing, peptide fermenting, neutrophilic Crenarchaeote growing up to 108 degrees C
Brügger, K., Chen, L., Stark, M., Zibat, A., Redder, P., Ruepp, A., Awayez, M., She, Q., Garrett, Roger Antony & Klenk, H., 2007, In: Archaea. 2, 2, p. 127-35 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comment on "Protein Sequences from Mastodon and Tyrannosaurus rex Revealed by Mass Spectrometry".
Buckley, M., Walker, A., Ho, S. Y. W., Yang, Y., Smith, C., Ashton, P., Oates, J. T., Cappellini, E., Koon, H., Penkman, K., Elsworth, B., Ashford, D., Solazzo, C., Andrews, P., Strahler, J., Shapiro, B., Ostrom, P., Gandhi, H., Miller, W., Raney, B. & 8 others, , 2008, In: Science. 319, 5859, p. 33Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Presence of N-acyl Homoserine Lactones in Soil Detected by a Whole-Cell Biosensor and Flow Cytometry
Burmølle, Mette, Hansen, Lars Hestbjerg, Oregaard, G. & Sørensen, Søren Johannes, 2003, In: Microbial Ecology. 45, 3, p. 226-236 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The presence of embedded bacterial pure cultures in agar plates stimulate the culturability of soil bacteria.
Burmølle, Mette, Johnsen, K., Abu Al-Soud, W. M. A. F., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Journal of Microbiological Methods. 79, 2, p. 166-173 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequencing of IncX-plasmids suggests ubiquity of mobile forms of a biofilm-promoting gene cassette recruited from Klebsiella pneumoniae
Burmølle, Mette, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012, In: PLOS ONE. 7, 7, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
Most downloads
-
5130
downloads
Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
3026
downloads
Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Research output: Contribution to conference › Poster › Research
Published -
2949
downloads
Extreme emission of n2o from tropical wetland soil (pantanal, South America)
Research output: Contribution to journal › Journal article › Research › peer-review
Published
Latest publications
Optimizing cleaning strategies for biofouling in reverse osmosis membrane systems: A comparative study using a self-formed instrument
Research output: Contribution to journal › Journal article › Research › peer-review
Interphylum dissemination of NDM-5-positive plasmids in hospital wastewater from Fuzhou, China: a single-centre, culture-independent, plasmid transmission study
Research output: Contribution to journal › Journal article › Research › peer-review
Using Nanopore Sequencing Deciphering Antibiotic Resistance Dissemination In The Wastewater Systems
Research output: Book/Report › Ph.D. thesis › Research