Microbiology

Read more
101 - 200 out of 950Page size: 100
Sort by: Title
  1. Published

    Asthma and Wheeze Severity and the Oropharyngeal Microbiota in Children and Adolescents

    Thorsen, J., Stokholm, J., Rasmussen, M. A., Roggenbuck-Wedemeyer, M., Vissing, N. H., Mortensen, M. S., Brejnrod, A. D., Fleming, L., Bush, A., Roberts, G., Singer, F., Frey, U., Hedlin, G., Nordlund, B., Murray, C. S., Abdel-Aziz, M. I., Hashimoto, S., van Aalderen, W., Maitland-van der Zee, A. H., Shaw, D. & 13 others, Fowler, S. J., Sousa, A., Sterk, P. J., Chung, K. F., Adcock, I. M., Djukanovic, R., Auffray, C., Bansal, A. T., Wagers, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes & Bisgaard, H., 2022, In: Annals of the American Thoracic Society. 19, 12, p. 2031-2043 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Authenticity in ancient DNA studies.

    Gilbert, M Thomas P & Willerslev, Eske, 2006, In: Medicina nei Secoli. 18, 3, p. 701-23 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Autogenic succession and deterministic recovery following disturbance in soil bacterial communities

    Jurburg, S. D., Nunes, I. M., Stegen, J. C., Le Roux, X., Priemé, Anders, Sørensen, Søren Johannes & Salles, J. F., 6 Apr 2017, In: Scientific Reports. 7, 11 p., 45691.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Automatic generation of gene finders for eukaryotic species

    Terkelsen, K. M. & Krogh, Anders, 2006, In: BMC Bioinformatics. 7, 263

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Autophagic components contribute to hypersensitive cell death in Arabidopsis

    Hofius, D., Schultz-Larsen, T., Joensen, J., Tsitsigiannis, D. I., Petersen, N. H. T., Mattsson, O., Jørgensen, L. B., Jones, J. D. G., Mundy, J. & Petersen, Morten, 2009, In: Cell. 137, 4, p. 773-83 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Azo dying of α-keratin material improves microbial keratinase screening and standardization

    Gonzalo, M., Espersen, R., Al-Soud, W. A., Cristiano Falco, F., Hägglund, Per Mårten, Sørensen, Søren Johannes, Svensson, B. & Jacquiod, S., 2020, In: Microbial Biotechnology. 13, 4, p. 984-996

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Back to the future of soil metagenomics

    Nesme, J., Achouak, W., Agathos, S. N., Bailey, M., Baldrian, P., Brunel, D., Frostegard, A., Heulin, T., Jansson, J. K., Jurkevitch, E., Kruus, K. L., Kowalchuk, G. A., Lagares, A., Lappin-Scott, H. M., Lemanceau, P., Le Paslier, D., Mandic-Mulec, I., Murrell, J. C., Myrold, D. D., Nalin, R. & 28 others, Nannipieri, P., Neufeld, J. D., O'Gara, F., Parnell, J. J., Puehler, A., Pylro, V., Ramos, J. L., Roesch, L. F. W., Schloter, M., Schleper, C., Sczyrba, A., Sessitsch, A., Sjoeling, S., Sørensen, Jan, Sørensen, Søren Johannes, Tebbe, C. C., Topp, E., Tsiamis, G., van Elsas, J. D., van Keulen, G., Widmer, F., Wagner, M., Zhang, T., Zhang, X., Zhao, L., Zhu, Y., Vogel, T. M. & Simonet, P., 2016, In: Frontiers in Microbiology. 7, 5 p., 73.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Bacteria in Mercury Contaminated Soil and Horizontal gene Transfer

    Øregaard, G., 2008, Department of Biology.

    Research output: Book/Report › Ph.D. thesis › Research

  9. Published

    Bacteria in the first void urine of urethritis patients and healthy controls analysed by 454 high throughput senquencing

    Ahrens, P., Frølund, M., Abu Al-Soud, W., Wikström, A., Lidbrink, P., Cullberg, M., Sørensen, Søren Johannes & Jensen, J. S., 2012.

    Research output: Contribution to conference › Poster › Research

  10. Published

    Bacterial and protozoan dynamics upon thawing and freezing of an active layer permafrost soil

    Schostag, M., Priemé, Anders, Jacquiod, S., Russel, J., Ekelund, Flemming & Jacobsen, C. S., 2019, In: ISME Journal. 13, p. 1345-1359

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Bacterial chitinolytic communities respond to chitin and pH alteration in soil

    Kielak, A., Cretoiu, M., Semenov, A., Sørensen, Søren Johannes & van Elsas, J., 2013, In: Applied and Environmental Microbiology. 79, 1, p. 263-272 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Bacterial chromosomal mobility via lateral transduction exceeds that of classical mobile genetic elements

    Humphrey, S., Fillol-Salom, A., Quiles-Puchalt, N., Ibarra Chavez, Rodrigo, Haag, A. F., Chen, J. & Penadés, J. R., 2021, In: Nature Communications. 12, 13 p., 6509.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Bacterial communities in termite fungus combs are comprised of consistent gut deposits and contributions from the environment

    Otani, S., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Poulsen, Michael, 2016, In: Microbial Ecology. 71, 1, p. 207-220 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Bacterial community analysis for investigating bacterial transfer from tonsils to the pig carcass

    Jakobsen, A. M., Bahl, M. I., Buschhardt, T., Hansen, T. B., Abu Al-Soud, W., Brejnrod, A. D., Sørensen, Søren Johannes, Nesbakken, T. & Aabo, S., 2019, In: International Journal of Food Microbiology. 295, p. 8-18 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Bacterial community structure in High-Arctic snow and freshwater as revealed by pyrosequencing of 16S rRNA genes and cultivation

    Møller, A. K., Søborg, D. A., Abu Al-Soud, W., Sørensen, Søren Johannes & Kroer, Niels, 2013, In: Polar Research. 32, 11 p., 17390.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Bacterial diversity in permanently cold and alkaline ikaite columns from Greenland

    Schmidt, M., Priemé, Anders & Stougaard, P., 2006, In: Extremophiles. 10, 6, p. 551-562 12 p.

    Research output: Contribution to journal › Journal article › Research

  17. Published

    Bacterial dynamics during decomposition of alder litter

    Kjøller, Annelise Helene, Struwe, Sten & Vestberg, K., 1985, In: Soil Biology and Biochemistry. 17, 4, p. 463-468 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Bacterial mitosis: partitioning protein ParA oscillates in spiral-shaped structures and positions plasmids at mid-cell

    Ebersbach, G., Gerdes, K. & Charbon, G. E., 1 Apr 2004, In: Molecular Microbiology. 52, 2, p. 385-98 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Bacterial mitotic machineries

    Gerdes, K., Møller-Jensen, J., Ebersbach, G., Kruse, T., Nordström, K. & Charbon, G. E., 6 Feb 2004, In: Cell. 116, 3, p. 359-66 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Bacterial resistance to arsenic protects against protist killing

    Hao, X., Li, Xuan Ji, Pal, C., Hobman, J., Larsson, D. G. J., Saquib, Q., Alwathnani, H. A., Rosen, B. P., Zhu, Y. & Rensing, C., Apr 2017, In: BioMetals. 30, 2, p. 307-311 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Bacterial social interactions and the emergence of community-intrinsic properties

    Madsen, Jonas Stenløkke, Sørensen, Søren Johannes & Burmølle, Mette, 2018, In: Current Opinion in Microbiology. 42, p. 104-109 6 p.

    Research output: Contribution to journal › Review › Research › peer-review

  22. Published

    Bacterial symbiont sharing in Megalomyrmex social parasites and their fungus-growing ant hosts

    Liberti, J., Sapountzis, P., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Adams, R. M. M. & Boomsma, Jacobus J., 2015, In: Molecular Ecology. 24, 12, p. 3151-3169 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Bacteriophages of Leuconostoc, Oenococcus, and Weissella

    Kot, Witold, Neve, H., Heller, K. J. & Vogensen, Finn Kvist, 2014, In: Frontiers in Microbiology. 5, p. 1-9 9 p., 186.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Bacteriophages suppress CRISPR–Cas immunity using RNA-based anti-CRISPRs

    Camara, Sarah, Mayo-Muñoz, D., Russel, J., Fagerlund, R. D., Madsen, Jonas Stenløkke, Fineran, P. C., Sørensen, Søren Johannes & Pinilla Redondo, Rafael, 2023, In: Nature. 623, 7987, p. 601-607 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Balsaminaceae

    Rasmussen, Finn N., 2006, Dansk flora. Frederiksen, S., Rasmussen, F. N. & Seberg, O. (eds.). København: Gyldendal, p. 462-463 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education

  26. Published

    Barking up the wrong tree: modern northern European dogs fail to explain their origin.

    Malmström, H., Vilà, C., Gilbert, M Thomas P, Storå, J., Willerslev, Eske, Holmlund, G. & Götherström, A., 2008, In: BMC Evolutionary Biology. 8, p. 71

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Barley Rhizosphere Microbiome Transplantation: A Strategy to Decrease Susceptibility of Barley Grown in Soils With Low Microbial Diversity to Powdery Mildew

    Bziuk, N., Maccario, Lorrie, Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2022, In: Frontiers in Microbiology. 13, 14 p., 830905.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Bayesian inference of the metazoan phylogeny: a combined molecular and morphological approach

    Glenner, Henrik, Hansen, Anders Johannes, Sørensen, Martin Vinther, Ronquist, F., Huelsenbeck, J. P. & Willerslev, Eske, 2004, In: Current Biology. 14, 18, p. 1644-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Beringian paleoecology inferred from permafrost-preserved fungal DNA

    Lydolph, M. C., Jacobsen, J., Arctander, P., Gilbert, M Thomas P, Gilichinsky, D. A., Hansen, Anders Johannes, Willerslev, Eske & Lange, L., 2005, In: Applied and Environmental Microbiology. 71, 2, p. 1012-7 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Besigtigelse af orkidéforekomsten i lergraven ved Cathrinesminde teglværk

    Rasmussen, Finn N., 2000, 2 p..

    Research output: Memorandum/exposition › Memorandum

  31. Published

    Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing

    Holmsgaard, P. N., Poulsen, P., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Nov 2010.

    Research output: Contribution to conference › Poster › Research

  32. Published

    Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing

    Holmsgaard, P. N., Poulsen, P. H. B., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  33. Published

    Bias in bacterial diversity as a result of Nycodenz extraction from bulk soil

    Holmsgaard, P. N., Norman, A., Hede, S. C., Poulsen, P. H. B., Al-Soud, W. A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 14 Jul 2011, In: Soil Biology & Biochemistry. 43, 10, p. 2152-2159 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Big Impact of the Tiny: Bacteriophage–Bacteria Interactions in Biofilms

    Hansen, Mads Frederik, Svenningsen, Sine Lo, Røder, Henriette Lyng, Middelboe, Mathias & Burmølle, Mette, 2019, In: Trends in Microbiology. 27, 9, p. 739-752 14 p.

    Research output: Contribution to journal › Review › Research › peer-review

  35. Published

    Bio-Sustainable Control of the Blue Stain Fungi Aureobasidium pullulans on Exterior Wood Coatings

    Stenbæk, J., 2015, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  36. Published

    Biochemical and physical correlates of DNA contamination in archaeological human bones and teeth excavated at Matera, Italy

    Gilbert, M Thomas P, Rudbeck, L., Willerslev, Eske, Hansen, Anders Johannes, Smith, C., Penkman, K. E. H., Prangenberg, K., Nielsen-Marsh, C. M., Jans, M. E., Arthur, P., Lynnerup, Niels, Turner-Walker, G., Biddle, M., Kjolbye-Biddle, B. & Collins, M. J., 2005, In: Journal of Archaeological Science. 32, 5, p. 785-793

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Biocontrol of Bacterial Wilt Disease Through Complex Interaction Between Tomato Plant, Antagonists, the Indigenous Rhizosphere Microbiota, and Ralstonia solanacearum

    Elsayed, T. R., Jacquiod, S., Nour, E. H., Sørensen, Søren Johannes & Smalla, K., 2020, In: Frontiers in Microbiology. 10, 15 p., 2835.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Biofilm cultivation facilitates coexistence and adaptive evolution in an industrial bacterial community

    Henriksen, N. N. S. E., Hansen, Mads Frederik, Kiesewalter, Heiko T., Russel, J., Nesme, Joseph, Foster, K. R., Svensson, B., Øregaard, G., Herschend, J. & Burmølle, Mette, 2022, In: npj Biofilms and Microbiomes. 8, 8 p., 59.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Biofilm growth and near infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina

    Behrendt, L., Schrameyer, V., Qvortrup, Klaus, Neves Lundin, A. L., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2012, In: Applied and Environmental Microbiology. 78, 11, p. 3896-3904 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Biofilms can act as plasmid reserves in the absence of plasmid specific selection

    Røder, Henriette Lyng, Trivedi, Urvish, Russel, J., Kragh, K. N., Herschend, J., Thalsø-Madsen, I., Tolker-Nielsen, Tim, Bjarnsholt, Thomas, Burmølle, Mette & Madsen, Jonas Stenløkke, 2021, In: npj Biofilms and Microbiomes. 7, 6 p., 78.

    Research output: Contribution to journal › Letter › Research › peer-review

  41. Published

    Biofilms in chronic infections - a matter of opportunity - monospecies biofilms in multispecies infections

    Burmølle, Mette, Thomsen, T. R., Fazli, M., Dige, I., Christensen, L., Homøe, Preben, Tvede, M., Nyvad, B., Tolker-Nielsen, Tim, Givskov, Michael, Moser, Claus Ernst, Kirketerp-Møller, K., Johansen, Helle Krogh, Høiby, Niels, Jensen, Peter Østrup, Sørensen, Søren Johannes & Bjarnsholt, Thomas, 2010, In: FEMS Immunology and Medical Microbiology. 59, 3, p. 324-336 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  42. Published

    Biofilms in soil

    Burmølle, Mette, Kjøller, Annelise Helene & Sørensen, Søren Johannes, 2011, Encyclopedia of agrophysics. Springer, p. 70-75 6 p. (Encyclopedia of Earth Sciences Series).

    Research output: Chapter in Book/Report/Conference proceeding › Encyclopedia chapter › Research › peer-review

  43. Published

    Biofouling on RO-membranes used for water recovery in the dairy industry

    Stoica, I., Vitzilaiou, E., Røder, Henriette Lyng, Burmølle, Mette, Thaysen, D., Knoechel, Susanne & van der Berg, Franciscus Winfried J, 2018, In: Journal of Water Process Engineering. 24, p. 1-10 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Bioinformatic approaches reveal metagenomic characterization of soil microbial community

    Xu, Z., Hansen, M. A., Hansen, Lars Hestbjerg, Jacquiod, S. J. A. & Sørensen, Søren Johannes, 2014, In: P L o S One. 9, 4, 11 p., e93445.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Biological soil crusts on agricultural soils of mesic regions promote microbial cross-kingdom co-occurrences and nutrient retention

    Kurth, J. K., Albrecht, M., Glaser, K., Karsten, U., Vestergaard, G., Armbruster, M., Kublik, S., Schmid, C. A. O., Schloter, M. & Schulz, S., 2023, In: Frontiers in Microbiology. 14, 16 p., 1169958.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Biosolids for safe land application: does wastewater treatment plant size matters when considering antibiotics, pollutants, microbiome, mobile genetic elements and associated resistance genes?

    Wolters, B., Hauschild, K., Blau, K., Mulder, I., Heyde, B. J., Sørensen, Søren Johannes, Siemens, J., Jechalke, S., Smalla, K. & Nesme, Joseph, 2022, In: Environmental Microbiology. 24, 3, p. 1573-1589 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Botanical classification and bubble maps

    Rasmussen, Finn N., 1992, In: American Journal of Botany. 6, p. 160-160 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  48. Published

    Botanisk Laboratorium - over 100 år i botanikkens tjeneste

    Seberg, Ole & Frederiksen, S. E., 2009, In: URT. 2009, 1, p. 23-33 11 p.

    Research output: Contribution to journal › Journal article › Research

  49. Published

    Bovine colostrum improves neonatal growth, digestive function, and gut immunity relative to donor human milk and infant formula in preterm pigs

    Rasmussen, S. O., Martin, L., Østergaard, M. V., Rudloff, S., Li, Y., Roggenbuck, M., Bering, S. B. & Sangild, Per Torp, 1 Sep 2016, In: American Journal of Physiology: Gastrointestinal and Liver Physiology. 311, 3, p. G480-G491 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Broad Dissemination of Plasmids across Groundwater-Fed Rapid Sand Filter Microbiomes

    Pinilla Redondo, Rafael, Olesen, Asmus Kalckar, Russel, J., de Vries, L. E., Christensen, L. D., Musovic, S., Nesme, Joseph & Sørensen, Søren Johannes, 2021, In: mBio. 12, 6, 13 p., e0306821.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community

    Klümper, U., Riber, Leise, Dechesne, A., Sannazzaro, A. I., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Smets, B. F., 2015, In: I S M E Journal. 9, p. 934-945 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Broad phylogenomic sampling improves resolution of the animal tree of life

    Dunn, C. W., Hejnol, A., Matus, D. Q., Pang, K., Browne, W. E., Smith, S. A., Seaver, E., Rouse, G. W., Obst, M., Edgecombe, G. D., Sørensen, Martin Vinther, Haddock, S. H. D., Schmidt-Rhaesa, A., Okuso, A., Kristensen, Reinhardt Møbjerg, Wheeler, W. C., Martindale, M. Q. & Giribet, G., 2008, In: Nature. 452, p. 745-750

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Broad-spectrum anti-CRISPR proteins facilitate horizontal gene transfer

    Mahendra, C., Christie, K. A., Osuna, B. A., Pinilla Redondo, Rafael, Kleinstiver, B. P. & Bondy-Denomy, J., 2020, In: Nature Microbiology. 5, 4, p. 620-629 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Bromadiolone resistance does not respond to absence of anticoagulants in experimental populations of Norway rats.

    Heiberg, A. C., Leirs, H. & Siegismund, Hans Redlef, 2003, Rats, Mice and People: Rodent Biology and Management. Singleton, G. R., Hinds, L. A., Krebs, C. J. & Spratt, D. M. (eds.). Canberra, Vol. 96. p. 461-464

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  55. Published

    Bulk soil and maize rhizosphere resistance genes, mobile genetic elements and microbial communities are differently impacted by organic and inorganic fertilization

    Wolters, B., Jacquiod, S. J. A., Sørensen, Søren Johannes, Widyasari-Mehta, A., Bech, T. B., Kreuzig, R. & Smalla, K., 2018, In: F E M S Microbiology Ecology. 94, 4, 13 p., fiy027.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    CLIMAITE - a three factor climate change ecosystem manipulation experiment: Geophysical Research Abstracts, Vol. 10, EGU2008-A-07931, 2008. SRef-ID: 1607-7962/gra/EGU2008-A-07931. EGU General Assembly 13-18 April 2008 in Vienna, Switzerland

    N. Mikkelsen, T., Beier, C., Jonasson, S. E., Holmstrup, M., Schmidt, I. K., Ambus, P. L., Pilegaard, K., Michelsen, A., Albert, K., Andresen, L. C., Arndal, M. F., Bruun, N., Christensen, S., Danbæk, S., Gundersen, P., Jørgensen, P., J. Linden, L., Pedersen, J. K., Maraldo, K., Priemé, A. & 11 others, Riis-Nielsen, T., Ro-Poulsen, Helge, Andersen, K. S., Selsted, M., Sørensen, P., S. Larsen, K., S. Carter, M., Ibrom, A., Martinussen, Torben, Miglietta, F. & Sverdrup, H., 2008.

    Research output: Contribution to conference › Conference abstract for conference › Research

  57. Published

    CRISPR adaptive immune systems of Archaea

    Vestergaard, G. A., Garrett, Roger Antony & Shah, S. A., 2014, In: R N A Biology. 11, 2, p. 157-168 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    CRISPR families of the crenarchaeal genus Sulfolobus: bidirectional transcription and dynamic properties

    Lillestøl, R. K., Shah, S. A., Brügger, K., Redder, P., Phan, Safir Hien, Christiansen, Jan & Garrett, Roger Antony, 2009, In: Molecular Microbiology. 72, 1, p. 259-272

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    CRISPR-Cas systems are widespread accessory elements across bacterial and archaeal plasmids

    Pinilla Redondo, Rafael, Russel, J., Mayo-Muñoz, D., Shah, S. A., Garrett, Roger Antony, Nesme, Joseph, Madsen, Jonas Stenløkke, Fineran, P. C. & Sørensen, Søren Johannes, 2022, In: Nucleic Acids Research. 50, 8, p. 4315-4328

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    CRISPR-Cas12a targeting of ssDNA plays no detectable role in immunity

    Marino, N. D., Pinilla Redondo, Rafael & Bondy-Denomy, J., 2022, In: Nucleic acids symposium series. 50, 11, p. 6414-6422 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    CRISPRCasTyper: Automated Identification, Annotation, and Classification of CRISPR-Cas Loci

    Russel, J., Pinilla Redondo, Rafael, Mayo-Muñoz, D., Shah, S. A. & Sørensen, Søren Johannes, 2020, In: CRISPR Journal. 3, 6, p. 462-469 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Camillea (Xylariaceae, Ascomycota), including two new species, along a trans-Andean altitude gradient in Ecuador

    Hastrup, A. C. S. & Læssøe, Thomas, 2009, In: Mycological Progress. 8, 4, p. 305-316 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Can multi-species biofilms defeat antimicrobial surfaces on medical devices?

    Ramstedt, M. & Burmølle, Mette, 2022, In: Current Opinion in Biomedical Engineering. 22, 8 p., 100370.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Catch Crop Residues Stimulate N2O Emissions During Spring, Without Affecting the Genetic Potential for Nitrite and N2O Reduction

    Duan, Y., Hallin, S., Jones, C. M., Priemé, Anders, Labouriau, R. & Petersen, S. O., 2018, In: Frontiers in Microbiology. 9, p. 1-13 2629.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Cell mass and cell cycle dynamics of an asynchronous budding yeast population: Experimental observations, flow cytometry data analysis, and multi-scale modeling

    Lencastre Fernandes, R., Carlquist, M., Neves Lundin, A. L., Heins, A., Dutta, A., Sørensen, Søren Johannes, Jensen, R. A., Nopens, I., Eliasson Lantz, A. & Gernaey, K., 2013, In: Biotechnology and Bioengineering (Print). 110, 3, p. 812-826 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Centenarians have a diverse gut virome with the potential to modulate metabolism and promote healthy lifespan

    Johansen, Joachim, Atarashi, K., Arai, Y., Hirose, N., Sørensen, Søren Johannes, Vatanen, T., Knip, M., Honda, K., Xavier, R. J., Rasmussen, Simon & Plichta, D. R., 2023, In: Nature Microbiology. 8, p. 1064-1078 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Centre for Anti-resistance; Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  68. Published

    Changes in rumen bacterial and archaeal communities over the transition period in primiparous Holstein dairy cows

    Zhu, Z., Kristensen, L., Difford, G. F., Poulsen, M., Noel, S. J., Abu Al-Soud, W., Sørensen, Søren Johannes, Lassen, J., Løvendahl, P. & Højberg, O., 2018, In: Journal of Dairy Science. 101, 11, p. 9847-9862

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Changes in the flora of soil fungi following oil waste application

    Llanos, C. & Kjøller, Annelise Helene, 1976, In: Oikos. 27, 3, p. 377-382 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Changes induced by heavy metals in the plant-associated microbiome of Miscanthus x giganteus

    Zadel, U., Nesme, Joseph, Michalke, B., Vestergaard, G., Płaza, G. A., Schröder, P., Radl, V. & Schloter, M., 2020, In: Science of the Total Environment. 711, 10 p., 134433.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Changing Influences on Childhood Obesity: A Study of 2 Generations of the 1958 British Birth Cohort

    Pinot de Moira, Angela, Power, C. & Li, L., May 2010, In: American Journal of Epidemiology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Characterisation, dissemination and persistence of gentamicin resistant Escherichia coli from a Danish university hospital to the waste water environment

    Jakobsen, L., Sandvang, D., Hansen, Lars Hestbjerg, Bagger-Skjøt, L., Westh, Henrik T., Jørgensen, C., Hansen, D. S., Pedersen, B. M., Monnet, D. L., Frimodt-Møller, N., Sørensen, Søren Johannes & Hammerum, A. M., 2008, In: Environment International. 34, 1, p. 108-15 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Characterization of Extracellular Biosurfactants Expressed by a Pseudomonas putida Strain Isolated from the Interior of Healthy Roots from Sida hermaphrodita Grown in a Heavy Metal Contaminated Soil

    Bernat, P., Nesme, Joseph, Paraszkiewicz, K., Schloter, M. & Płaza, G., 2019, In: Current Microbiology. 76, 11, p. 1320-1329 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Characterization of bacterial populations in Danish raw milk cheeses made with different starter cultures by denaturating gradient gel electrophoresis and pyrosequencing

    Masoud, W. M. H., Takamiya, M. K. W., Vogensen, Finn Kvist, Lillevang, S., Abu Al-Soud, W., Sørensen, Søren Johannes & Jakobsen, M., 2011, In: International Dairy Journal. 21, 3, p. 142-148 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Characterization of genetic determinants of extended-spectrum cephalosporinases (ESCs) in Escherichia coli isolates from Danish and imported poultry meat

    Bergenholtz, R. D., Jørgensen, M. S., Hansen, Lars Hestbjerg, Jensen, L. B. & Hasman, H., 2009, In: Journal of Antimicrobial Chemotherapy. 64, 1, p. 207-209 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Characterization of genetic miscoding lesions caused by postmortem damage

    Gilbert, M Thomas P, Hansen, Anders Johannes, Willerslev, Eske, Rudbeck, L., Barnes, I., Cooper, A. & Lynnerup, Niels, 2002, In: American Journal of Human Genetics. 72, 1, p. 48-61 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Characterization of host associated microbiota under influencing factors: A case study on human gut and Brachypodium root

    Wei, S., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  78. Published

    Characterization of pIC13_78, a biofilm enabling plasmid

    Madsen, Jonas Stenløkke, Norman, A., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  79. Published

    Characterization of the Mobilome and Microbiome of Rat Cecum

    Jørgensen, T. S., 2015, Department of Biology, Faculty of Science, University of Copenhagen. 174 p.

    Research output: Book/Report › Ph.D. thesis › Research

  80. Published

    Characterization of the gut microbiota in leptin deficient obese mice: correlation to inflammatory and diabetic parameters

    Ellekilde, M., Krych, Lukasz, Hansen, Camilla Hartmann Friis, Hufeldt, M. R., Dahl, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2014, In: Research in Veterinary Science. 96, 2, p. 241-250 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Cheirostylis seidenfadeniana sp. nov. (Orchidaceae) from India

    Kumar, C. S. & Rasmussen, Finn N., 1987, In: Nordic Journal of Botany. 7, 4, p. 409-411 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Chlorophyll f-driven photosynthesis in a cavernous cyanobacterium

    Behrendt, L., Brejnrod, A. D., Schliep, M., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2015, In: The ISME Journal. 9, 9, p. 2108-2111 4 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  83. Published

    Chromosomal insertion of the entire Escherichia coli lactose operon, into two strains of Pseudomonas, using a modified mini-Tn5 delivery system

    Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Jensen, L. B., 1997, In: Gene. 186, 2, p. 167-173

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Climatic and seasonal regulation of seed germination and seedling development inferred from experiments with Dactylorhiza majalis in symbiotic culture.

    Rasmussen, Hanne Nina & Rasmussen, Finn N., 1990, In: American Journal of Botany. 6 (suppl), p. 47-47 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  85. Published

    Co-existence in multispecies biofilm communities

    Røder, Henriette Lyng, 2017, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  86. Published

    Co-selection of antibiotic resistance genes, and mobile genetic elements in the presence of heavy metals in poultry farm environments

    Mazhar, S. H., Li, Xuan Ji, Rashid, A., Su, J., Xu, J., Brejnrod, A. D., Su, J., Wu, Y., Zhu, Y., Zhou, S. G., Feng, R. & Rensing, C., 2021, In: Science of the Total Environment. 755, Part 2, 10 p., 142702.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Coexistence facilitates interspecific biofilm formation in complex microbial communities

    Madsen, Jonas Stenløkke, Røder, Henriette Lyng, Russel, J., Sørensen, Helle, Burmølle, Mette & Sørensen, Søren Johannes, 2016, In: Environmental Microbiology. 18, 8, p. 2565–2574

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Colonic lesions, cytokine profiles, and gut microbiota in plasminogen-deficient mice

    Vestergaard, Bill, Krych, Lukasz, Lund, L. R., Jørgensen, B. M. P., Hansen, Lars Hestbjerg, Jensen, Henrik Elvang, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2015, In: Comparative Medicine. 65, 5, p. 382-397 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Combined effects of drought, temperature and CO2 on GHG emissions from temperate shrub-land

    Ambus, Per Lennart, Priemé, Anders, S. Carter, M., Albert, K., S. Larsen, K., Andersson, M. & Beier, C., 2007.

    Research output: Contribution to conference › Conference abstract for conference › Research

  90. Published

    Combined use of Bacteriophage K and a novel Bacteriophage to reduce Staphylococcus aureus biofilm formation

    Alves, D. R., Gaudion, A., Bean, J. E., Esteban, P. P., Arnot, T. C., Harper, D. R., Kot, Witold, Hansen, Lars Hestbjerg, Enright, M. C. & Jenkins, A. T. A., 2014, In: Applied and Environmental Microbiology. 80, 21, p. 6694-6703 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Combining a novel biofilm reactor with a constructed wetland for rural, decentralized wastewater treatment

    Zhang, R., Liu, X., Wang, L., Xu, P., Li, K., Chen, X., Meng, R., Pu, Y., Yang, X., Rousseau, D. P. L. & Van Hulle, S. W. H., 2023, In: Chemical Engineering Journal. 455, 11 p., 140906.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Combining reverse osmosis and microbial degradation for remediation of drinking water contaminated with recalcitrant pesticide residue

    Schostag, M. D., Gobbi, Alex, Fini, M. N., Ellegaard-Jensen, L., Aamand, J., Hansen, Lars Hestbjerg, Muff, J. & Albers, C. N., 2022, In: Water Research. 216, 12 p., 118352.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Comment on "Protein Sequences from Mastodon and Tyrannosaurus rex Revealed by Mass Spectrometry".

    Buckley, M., Walker, A., Ho, S. Y. W., Yang, Y., Smith, C., Ashton, P., Oates, J. T., Cappellini, E., Koon, H., Penkman, K., Elsworth, B., Ashford, D., Solazzo, C., Andrews, P., Strahler, J., Shapiro, B., Ostrom, P., Gandhi, H., Miller, W., Raney, B. & 8 others, Zylber, M. I., Gilbert, M Thomas P, Prigodich, R. V., Ryan, M., Rijsdijk, K. F., Janoo, A., Collins, M. J. & Gilbert, M Thomas P, 2008, In: Science. 319, 5859, p. 33

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Community structure of the metabolically active rumen bacterial and archaeal communities of dairy cows over the transition period

    Zhu, Z., Noel, S. J., Difford, G. F., Abu Al-Soud, W., Brejnrod, A. D., Sørensen, Søren Johannes, Lassen, J., Løvendahl, P. & Højberg, O., 8 Nov 2017, In: PLoS ONE. 12, 11, 24 p., e0187858.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Community-intrinsic properties enhance keratin degradation from bacterial consortia

    Nasipuri, P., Herschend, J., Brejnrod, A. D., Madsen, Jonas Stenløkke, Espersen, R., Svensson, B., Burmølle, Mette, Jacquiod, S. & Sørensen, Søren Johannes, 2020, In: PLoS ONE. 15, 1, 26 p., e0228108.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Community-wide changes reflecting bacterial interspecific interactions in multispecies biofilms

    Sadiq, F. A., Burmølle, Mette, Heyndrickx, M., Flint, S., Lu, W., Chen, W., Zhao, J. & Zhang, H., 2021, In: Critical Reviews in Microbiology. 47, 3, p. 338-358 21 p.

    Research output: Contribution to journal › Review › Research › peer-review

  97. Published

    Comparative Genomics Analysis of Keratin-Degrading Chryseobacterium Species Reveals Their Keratinolytic Potential for Secondary Metabolite Production

    Kang, D., Shoaie, S., Jacquiod, S., Sørensen, Søren Johannes & Ledesma-Amaro, R., 2021, In: Microorganisms. 9, 5, 15 p., 1042.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Comparative Genomics of Novel Agrobacterium G3 Strains Isolated From the International Space Station and Description of Agrobacterium tomkonis sp. nov.

    Singh, N. K., Lavire, C., Nesme, Joseph, Vial, L., Nesme, X., Mason, C. E., Lassalle, F. & Venkateswaran, K., 2021, In: Frontiers in Microbiology. 12, 15 p., 765943.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Comparative analysis of bacterial communities in a potato field as determined by pyrosequencing

    Inceoglu, Ö., Abu Al-Soud, W., Salles, J. F., Semenov, A. V. & van Elsas, J. D., 1 Aug 2011, In: P L o S One. 6, 8, p. e23321 (1-10) 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Comparative analysis of the alveolar microbiome in COPD, ECOPD, Sarcoidosis, and ILD patients to identify respiratory illnesses specific microbial signatures

    Gupta, S., Shariff, M., Chaturvedi, G., Sharma, A., Goel, N., Yadav, M., Mortensen, M. S., Sørensen, Søren Johannes, Mukerji, M. & Chauhan, N. S., 2021, In: Scientific Reports. 11, 11 p., 3963.

    Research output: Contribution to journal › Journal article › Research › peer-review

Previous 1 2 3 4 5 6 7 8 ...10 Next