Microbiology

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  1. 2020
  2. Published

    Rose replant disease: detailed analyses of plant reactions, root endophytes and rhizosphere microbial communities

    Baumann, A., Yim, B., Grunewaldt-Stöcker, G., Liu, B., Beerhues, L., Sapp, M., Nesme, Joseph, Sørensen, Søren Johannes, Smalla, K. & Winkelmann, T., 2020, In: Acta Horticulturae. 1283, p. 97-104 8 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  3. 2012
  4. Published

    Bacteria in the first void urine of urethritis patients and healthy controls analysed by 454 high throughput senquencing

    Ahrens, P., Frølund, M., Abu Al-Soud, W., Wikström, A., Lidbrink, P., Cullberg, M., Sørensen, Søren Johannes & Jensen, J. S., 2012.

    Research output: Contribution to conference › Poster › Research

  5. Published

    DGGE and Pyrosequencing characterization of microbial community and methane-metabolizing microorganisms in livestock slurry surface crusts

    Duan, Y. (., Abu Al-Soud, W., Sørensen, Søren Johannes, Elsgaard, L., Petersen, S. O. & Boon, N., 2012.

    Research output: Contribution to conference › Poster › Research

  6. Published

    Design and synthesis of a functional self-replicating, broad host range cloning vector from bits and bytes

    Riber, Leise, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012.

    Research output: Contribution to conference › Poster › Research

  7. Published

    Ecology and photobiology of chlorophyll d-containing cyanobacteria

    Kühl, Michael, Behrendt, L., Trampe, Erik, Sørensen, Søren Johannes, Chen, M., Qvortrup, K. & Larkum, A., 2012.

    Research output: Contribution to conference › Conference abstract for conference › Research

  8. Published

    Ecology and photobiology of chlorophyll d-containing cyanobacteria

    Kühl, Michael, Behrendt, L., Trampe, Erik, Sørensen, Søren Johannes, Chen, M., Qvortrup, Klaus & Larkum, A. W. D., 2012.

    Research output: Contribution to conference › Poster › Research

  9. Published

    Heterogeneity in recombinant protein production

    Schalén, M., Johanson, T., Neves Lundin, A. L., Sørensen, Søren Johannes & Lantz, A. E., 2012, In: New Biotechnology. 29, Supplement, 0, p. S78 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  10. Published

    High robustness of soil bacteria and funghi to multifactorial climate change manipulations

    Bergmark, L., Haugwitz-Hardenberg-Reventlow, M. S., Sørensen, Søren Johannes & Priemé, Anders, 2012.

    Research output: Contribution to conference › Conference abstract for conference › Research

  11. Published

    Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid stability

    Riber, Leise, Burmølle, Mette, Milani, S. M., Alm, M., Thomsen, P., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  12. Published

    Novel and conserved bacterial mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine

    Kroer, Niels, Møller, A., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  13. Published

    Permissiveness of soil microbial communities toward receipt of mobile genetic elements

    Musovic, S., Klümper, U., Neves Lundin, A. L., Sørensen, Søren Johannes & Smets, B. F., 2012.

    Research output: Contribution to conference › Conference abstract for conference › Research

  14. Published

    When it makes sense to socialize whilst being on the move: A small EAL-domain containing protein, encoded on natural biofilm-promoting plasmids, triggers motility

    Madsen, Jonas Stenløkke, Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.

    Research output: Contribution to conference › Poster › Research

  15. 2011
  16. Published

    Sequence and comparative analysis of Lactococcus lactis c2 dairy bacteriphages with different thermal inactivation

    Vogensen, Finn Kvist, Nielsen, C. L. M., Bashir, A., Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Heller, K. J., Sørensen, Søren Johannes & Knoechel, Susanne, Aug 2011.

    Research output: Contribution to conference › Poster › Research

  17. Published

    Sequence of a SCCmec type VII (former VT) found in Danish ST8-t024-PVLneg CA-MRSA

    Boye, K., Pulis, S., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Westh, Henrik T., Apr 2011.

    Research output: Contribution to conference › Poster › Research

  18. Published

    Characterization of pIC13_78, a biofilm enabling plasmid

    Madsen, Jonas Stenløkke, Norman, A., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  19. Published

    Construction of biosensors to investigate physiological diversity in fermentation processes

    Han, S., Lundin, L. & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research

  20. Published

    Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Charbon, G., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.

    Research output: Contribution to conference › Poster › Research › peer-review

  21. Published

    Reduced N cycling in response to elevated CO2, warming, and drought in a Danish heathland

    Larsen, K. S., Andresen, L. C., Beier, C., Jonasson, S. E., Albert, K. R., Ambus, P. L., Arndal, M. F., Carter, M. S., Christensen, S., Holmstrup, M., Ibrom, A., Nielsen, J. K., van der Linden, L., Maraldo, K., Michelsen, A., Mikkelsen, T. N., Pilegaard, K., Priemé, A., Ro-Poulsen, H., Schmidt, I. K. & 2 others, Selsted, M. B. & Andersen, K. S., 2011, Nitrogen & global change: key findings - future challenges. 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  22. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Poster › Research

  23. Published

    Sequence and comparative analysis of Leuconostoc dairy bacteriophages

    Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  24. 2010
  25. Published

    Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing

    Holmsgaard, P. N., Poulsen, P., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Nov 2010.

    Research output: Contribution to conference › Poster › Research

  26. Published

    Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Filed Trial

    Li, L., Bergmark, L., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Norman, A. & Sørensen, Søren Johannes, Nov 2010.

    Research output: Contribution to conference › Poster › Research

  27. Published

    The effect of L. acidophilus NCFM intake on insulin sensitivity and gut microbiota: a randomized placebo-controlled trial

    Larsen, Nadja, Andreasen, A. S., Pedersen-Skovsgaard, T., Møller, K., van den Berg, F. W. J., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Pedersen, Bente Klarlund & Jakobsen, M., Sep 2010.

    Research output: Contribution to conference › Conference abstract for conference › Research

  28. Published

    A highly selective quantitative polymerase chain reactionprotocol for Burkholderia and Pseudomonas bacteria tested in soil

    Bergmark, L., Burmølle, Mette, Hansen, Lars Hestbjerg, Abu Al-Soud, W. & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  29. Published

    Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing

    Holmsgaard, P. N., Poulsen, P. H. B., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  30. Published

    Metamobilomics - Expanding the environmental mobilome with high throughput sequencing

    Norman, A., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  31. Published

    The Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Field Trial

    Li, L., Bergmark, L., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.

    Research output: Contribution to conference › Poster › Research

  32. Published

    Probing Barophilic Microbial Communities for Novel Proteolytic Enzymes

    Frank, J. A., Hansen, M. A. & Sørensen, Søren Johannes, May 2010.

    Research output: Contribution to conference › Poster › Research

  33. Published

    All equal, all different?

    Han, S., Lundin, L. & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  34. Published

    Centre for Anti-resistance; Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability

    Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.

    Research output: Contribution to conference › Poster › Research

  35. Published

    New ecological niches and habitats for Chlorophyll d- containing cyanobacteria

    Behrendt, L., Chen, M., Larkum, A. W. D., Ralph, P. J., Sørensen, Søren Johannes, Trampe, E. & Kühl, Michael, 2010.

    Research output: Contribution to conference › Poster › Research

  36. Published

    The gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults

    Nielsen, Dennis Sandris, Larsen, Nadja, Vogensen, Finn Kvist, van den Berg, F. W. J., Andreasen, A. S., Pedersen, B. K., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  37. Published

    The nitrogenase gene pool in surface waters of the global ocean is dominated by genes of non-cyanobacteria

    Farnelid, H., Andersson, A., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Hagström & Riemann, Lasse, 2010.

    Research output: Contribution to conference › Poster › Research

  38. 2009
  39. Published

    Application of full mitochondrial genome sequencing using 454 GS FLX pyrosequencing

    Mikkelsen, M., Rockenbauer, Eszter, Wächter, A., Fendt, L., Zimmermann, B., Parson, W., Nielsen, S. A., Gilbert, M Thomas P, Willerslev, Eske & Morling, Niels, 2009, Progress in Forensic Genetics 13: Proceedings of the 23rd International ISFG Congress. Morling, N. (ed.). Elsevier, Vol. 2. p. 518 - 519 2 p. (Forensic Science International: Genetics Supplement Series; No. 1, Vol. 2).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  40. Published

    Investigation of prokaryotic diversity in an urban waste field trial by high throughput sequencing

    Poulsen, P. H. B., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2009. 1 p.

    Research output: Contribution to conference › Poster › Research

  41. Published

    Investigation of prokaryotic diversity in an urban waste field trial by high throughput sequencing

    Poulsen, P. H. B., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  42. 2008
  43. Published

    CLIMAITE - a three factor climate change ecosystem manipulation experiment: Geophysical Research Abstracts, Vol. 10, EGU2008-A-07931, 2008. SRef-ID: 1607-7962/gra/EGU2008-A-07931. EGU General Assembly 13-18 April 2008 in Vienna, Switzerland

    N. Mikkelsen, T., Beier, C., Jonasson, S. E., Holmstrup, M., Schmidt, I. K., Ambus, P. L., Pilegaard, K., Michelsen, A., Albert, K., Andresen, L. C., Arndal, M. F., Bruun, N., Christensen, S., Danbæk, S., Gundersen, P., Jørgensen, P., J. Linden, L., Pedersen, J. K., Maraldo, K., Priemé, A. & 11 others, Riis-Nielsen, T., Ro-Poulsen, Helge, Andersen, K. S., Selsted, M., Sørensen, P., S. Larsen, K., S. Carter, M., Ibrom, A., Martinussen, Torben, Miglietta, F. & Sverdrup, H., 2008.

    Research output: Contribution to conference › Conference abstract for conference › Research

  44. Published

    Gunnar Seidenfaden's contributions to orchidology and conception of taxonomy and botanical science

    Rasmussen, Finn N., 2008, The Fourth International ConferenceonThe Comparative Biology of the MonocotyledonsThe Fifth International Symposium on Grass Systematics and Evolution H.C. Ørsted Institute, University of Copenhagen11-15 August 2008 · Copenhagen, Denmark. Museum Tusculanum, p. 50-50 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  45. Published

    Konflikter mellem molekylære og morfologiske hvalfylogenier

    Steeman, M. E., 2008.

    Research output: Contribution to conference › Conference abstract for conference › Research

  46. Published

    The rise and fall of Scalidophora - New insights in the phylogenetic position of Loricifera

    Sørensen, Martin Vinther, Hebsgaard, M. B., Heiner, I., Glenner, H., Kristensen, Reinhardt Møbjerg & Willerslev, Eske, 2008, Proceedings of the 13th International Meiofauna Conference. 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  47. 2007
  48. Published

    Biomimetic studies of wood decay: Simulating the effect of low molecular weight compounds and fungal enzymes

    Hastrup, A. C. S., Howell, C. & Jellison, J., 2007. 16 p.

    Research output: Contribution to conference › Poster › Research

  49. Published

    Combined effects of drought, temperature and CO2 on GHG emissions from temperate shrub-land

    Ambus, Per Lennart, Priemé, Anders, S. Carter, M., Albert, K., S. Larsen, K., Andersson, M. & Beier, C., 2007.

    Research output: Contribution to conference › Conference abstract for conference › Research

  50. Published

    Denitrification and N2O losses in a heath-land under changing climate conditions

    Ambus, Per Lennart, Priemé, Anders, S. Carter, M., Albert, K., S. Larsen, K., Andersson, M. & Beier, C., 2007.

    Research output: Contribution to conference › Conference abstract for conference › Research

  51. Published

    From Bits to Bauplan: Morphology in Orchid Studies

    Rasmussen, Finn N., 2007. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  52. Published

    The use of X-ray diffraction for analyzing biomodification of crystalline cellulose by wood decay fungi

    Howell, C., Hastrup, A. C. S. & Jellison, J., 2007, International Research Group on Wood Preservation: 38th Annual Meeting. IRG/WP 07-10622 ed. IRG, Vol. IRG/WP 07. 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  53. 2006
  54. Published

    The Biological Time Machine - Biological responses to multiple environmental and climatic changes: Environment and Stress, Ph.d. symposium at KVL October 2006

    Albert, K., Ro-Poulsen, Helge, N. Mikkelsen, T., Michelsen, Anders, Beier, C., Jonasson, S. E., Ambus, Per Lennart, Schmidt, Inger Kappel, Holmstrup, M., Priemé, Anders & Christensen, Søren, 2006.

    Research output: Contribution to conference › Conference abstract for conference › Research

  55. 2005
  56. Published

    Serpula lacrymans, The Dry Rot Fungus and Tolerance Towards Copper-Based Wood Preservatives

    Hastrup, A. C. S., Jensen, B., Clausen, C. & Green III, F., 2005, Ikke angivet: 36th Annual Meeting. U. S. Forest Service. Tree Search; Washington, D.C., Vol. IRG/WP 05. p. 1-7

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

  57. 2004
  58. Published

    A phase II study of a 3-day schedule with topotecan and cisplatin every three weeks in patients with previously in treated small cell lung cancer and extensive disease: Final results.

    Lassen, Ulrik Niels, Sorensen, M., Jensen, P., Langer, Seppo W., Jensen, B., Jeppesen, N., Rytter, C., Mellemgaard, A., Hansen, Oddur & Osterlind, K., 15 Jul 2004, In: Journal of Clinical Oncology. 22, 14, p. 667S-667S 1 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  59. 2003
  60. Published

    Isolation of genes involved in ovule development in the orchid Dendrobium thyrsiflorum (Reichb. f.) using expressed sequence tag (EST) analysis

    Skipper, M., Pedersen, K. B., Frederiksen, S. E. & Johansen, B. B., 2003.

    Research output: Contribution to conference › Poster › Research

  61. 2002
  62. Published

    JAWS: Just Add Water System - A device for detection of nucleic acids in Martian ice caps: In: Proceedings of the First European Workshop on Exo-Astrobiology, 16 - 19 September 2002, Graz, Austria. Ed.: Huguette Lacoste. ESA SP-518, Noordwijk, Netherlands: ESA Publications Division, ISBN , 2002, p. 309 - 312

    Hansen, Anders Johannes, Willerslev, Eske, Mørk, S., Hedegaard, M. M., Rønn, R. & Jeffares, D. C., 2002, Proceedings of the Second European Workshop on Exo-Astrobiology. ESA Publications Division, Vol. SP-518.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  63. 2000
  64. Published

    In Situ PCR - a tool for studyin plant molecular development

    Skipper, M., Frederiksen, S. E. & Johansen, B. B., 2000.

    Research output: Contribution to conference › Poster › Research

  65. 1998
  66. Published

    The evolution, phylogeny, and diversity of the monocotyledons - A Danish research project.

    Ågesen, L., Asmussen, C., Frederiksen, S. E., Pedersen, L. B., Rasmussen, Finn N., Johansen, B. B. & Seberg, Ole, 1998. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  67. 1992
  68. Published

    Botanical classification and bubble maps

    Rasmussen, Finn N., 1992, In: American Journal of Botany. 6, p. 160-160 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  69. 1990
  70. Published

    Climatic and seasonal regulation of seed germination and seedling development inferred from experiments with Dactylorhiza majalis in symbiotic culture.

    Rasmussen, Hanne Nina & Rasmussen, Finn N., 1990, In: American Journal of Botany. 6 (suppl), p. 47-47 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  71. 1989
  72. Published

    The role of Botanic Gardens in Orchid Research

    Rasmussen, Hanne Nina & Rasmussen, Finn N., 1989. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  73. 1987
  74. Published

    Taxonomy and the ontogeny of orchid pollinaria

    Rasmussen, Finn N., 1987. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  75. 1984
  76. Published

    Ontogeny and phylogeny in Orchidaceae

    Rasmussen, Finn N., 1984, In: American Journal of Botany. 5 (2)

    Research output: Contribution to journal › Conference abstract in journal › Research

  77. 1982
  78. Published

    The Clades of Orchidales

    Rasmussen, Finn N., 1982. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  79. Published

    The Diversity of pollinium stalks in Orchidaceae

    Rasmussen, Finn N., 1982. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research