- 2012
- Published
Extreme emission of n2o from tropical wetland soil (pantanal, South America)
Møller, L. L. H., Nielsen, L. P., Revsbech, N. P., Priemé, Anders, Elberling, Bo, Enrich-Prast, A. & Kühl, Michael, 2012, In: Frontiers in Microbiology. 3, p. 1-13 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fitness cost: a bacteriological explanation for the demise of the first international methicillin-resistant Staphylococcus aureus epidemic
Nielsen, K. L., Pedersen, T. M., Udekwu, K. I., Petersen, A., Skov, R. L., Hansen, Lars Hestbjerg, Hughes, D. & Frimodt-Moller, N., 2012, In: Journal of Antimicrobial Chemotherapy. 67, 6, p. 1325-1332 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut microbiota composition is correlated to grid floor induced stress and behavior in the BALB/c mouse
Bendtsen, K. M. B., Krych, Lukasz, Sørensen, Dorte Bratbo, Pang, W., Nielsen, Dennis Sandris, Josefsen, K., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Hansen, Axel Kornerup, 2012, In: P L o S One. 7, 10, 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Heterogeneity in recombinant protein production
Schalén, M., Johanson, T., Neves Lundin, A. L., Sørensen, Søren Johannes & Lantz, A. E., 2012, In: New Biotechnology. 29, Supplement, 0, p. S78 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
High robustness of soil bacteria and funghi to multifactorial climate change manipulations
Bergmark, L., Haugwitz-Hardenberg-Reventlow, M. S., Sørensen, Søren Johannes & Priemé, Anders, 2012.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Insight from the draft genome of Dietzia cinnamea P4 reveals mechanisms of survival in complex tropical soil habitats and biotechnology potential
Procópio, L., Alvarez, V. M., Jurelevicius, D. A., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Cardoso, J. S., Pádula, M., Leitao, Á. C., Seldin, L. & van Elsas, J. D., 2012, In: Antonie van Leeuwenhoek: Journal of Microbiology. 101, 2, p. 289-302 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Metamobilomics — expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing
Li, L., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: Clinical Microbiology and Infection. 18, Suppl. 4, p. 8-11 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metamorphosis in balanomorphan, pedunculated, and parasitic barnacles: a video-based analysis
Høeg, Jens Thorvald, Maruzzo, D., Okano, K., Glenner, Henrik & Chan, B. K. K., 2012, In: Integrative and Comparative Biology. 52, 3, p. 337-347 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella
Behrendt, L., Larkum, A. W. D., Trampe, Erik, Norman, A., Sørensen, Søren Johannes & Kühl, Michael, 2012, In: I S M E Journal. 6, p. 1222-1237 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mining of unexplored habitats for novel chitinases - chiA as a helper gene proxy in metagenomics
Cretoiu, M. S., Kielak, A. M., Abu Al-Soud, W., Sørensen, Søren Johannes & van Elsas, J. D., 2012, In: Applied Microbiology and Biotechnology. 94, 5, p. 1347-1358 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel and conserved bacterial mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea-ice brine
Kroer, Niels, Møller, A., Barkay, T., Hansen, M. A., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.Research output: Contribution to conference › Poster › Research
- Published
Permissiveness of soil microbial communities toward receipt of mobile genetic elements
Musovic, S., Klümper, U., Neves Lundin, A. L., Sørensen, Søren Johannes & Smets, B. F., 2012.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Phage-host interaction in Lactococcus and Leuconostoc
Kot, Witold, 2012, Department of Food Science, University of Copenhagen. 187 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Physiological heterogeneities in microbial populations and implications for physical stress tolerance
Carlqvist, M., Lencastre Fernandes, R., Helmark, S., Heins, A., Neves Lundin, A. L., Sørensen, Søren Johannes, Gernaey, K. & Eliasson Lantz, A., 2012, In: Microbial Cell Factories. 11, 94, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Primary cilia and aberrant cell signaling in epithelial ovarian cancer
Egeberg, D. L., Lethan, M., Manguso, R., Schneider, L., Awan, A., Jørgensen, T. S., Byskov, A. G., Pedersen, Lotte Bang & Christensen, Søren Tvorup, 2012, In: Cilia. 1, 15, 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing
Zakrzewski, M., Goesmann, A., Jaenicke, S., Jünemann, S., Eikmeyer, F., Szczepanowski, R., Abu Al-Soud, W., Sørensen, Søren Johannes, Pühler, A. & Schlüter, A., 2012, In: Journal of Biotechnology. 158, 4, p. 248-258 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Selection for Cu-tolerant bacterial communities with altered composition, but unaltered richness, via long-term Cu exposure
Berg, J., Brandt, Kristian Koefoed, Abu Al-Soud, W., Holm, Peter Engelund, Hansen, Lars Hestbjerg, Sørensen, Søren Johannes & Nybroe, O., 2012, In: Applied and Environmental Microbiology. 78, 20, p. 7438-7446 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequencing of IncX-plasmids suggests ubiquity of mobile forms of a biofilm-promoting gene cassette recruited from Klebsiella pneumoniae
Burmølle, Mette, Norman, A., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2012, In: PLOS ONE. 7, 7, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temporal trends in N2O flux dynamics in a Danish wetland – effects of plant-mediated gas transport of N2O and O2 following changes in water level and soil mineral-N availability
Jørgensen, C. J., Struwe, Sten & Elberling, Bo, 2012, In: Global Change Biology. 18, 1, p. 210-222 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The fate of indigenous microbiota, starter cultures, Escherichia coli, Listeria innocua and Staphylococcus aureus in Danish raw milk and cheeses determined by pyrosequencing and quantitative real time (qRT)-PCR
Masoud, W. M. H., Vogensen, Finn Kvist, Lillevang, S., Abu Al-Soud, W., Sørensen, Søren Johannes & Jakobsen, M., 2012, In: International Journal of Food Microbiology. 153, 1-2, p. 192-202 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The fate of mercury in Arctic terrestrial and aquatic ecosystems, a review
Douglas, T. A., Loseto, L. L., Macdonald, R. W., Outridge, P., Dommergue, A., Poulain, A., Amyot, M., Barkay, T., Berg, T., Chételat, J., Constant, P., Evans, M., Ferrari, C., Gantner, N., Johnson, M. S., Kirk, J., Kroer, N., Larose, C., Lean, D., Nielsen, T. G. & 7 others, , 2012, In: Environmental Chemistry (Online). 9, 4, p. 321-355 35 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
The genome sequence of the lactic acid bacterium, Carnobacterium maltaromaticum ATCC 35586 encodes potential virulence factors
Leisner, Jørgen, Hansen, M. A., Larsen, M. H., Hansen, L., Ingmer, Hanne & Sørensen, Søren Johannes, 2012, In: International Journal of Food Microbiology. 152, 3, p. 107-115 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The interconnection between biofilm formation and horizontal gene transfer
Madsen, Jonas Stenløkke, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012, In: F E M S Immunology and Medical Microbiology. 65, 2, p. 183-195 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Up-scaling of water use efficiency from leaf to canopy as based on leaf gas exchange relationships and the modeled in-canopy light distribution
Linderson, M., Mikkelsen, T. N., Ibrom, A., Lindroth, A., Ro-Poulsen, Helge & Pilegaard, K., 2012, In: Agricultural and Forest Meteorology. 152, p. 201-211 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
When it makes sense to socialize whilst being on the move: A small EAL-domain containing protein, encoded on natural biofilm-promoting plasmids, triggers motility
Madsen, Jonas Stenløkke, Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2012.Research output: Contribution to conference › Poster › Research
- 2011
- Published
Comparative analysis of bacterial communities in a potato field as determined by pyrosequencing
Inceoglu, Ö., Abu Al-Soud, W., Salles, J. F., Semenov, A. V. & van Elsas, J. D., 1 Aug 2011, In: P L o S One. 6, 8, p. e23321 (1-10) 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequence and comparative analysis of Lactococcus lactis c2 dairy bacteriphages with different thermal inactivation
Vogensen, Finn Kvist, Nielsen, C. L. M., Bashir, A., Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Heller, K. J., Sørensen, Søren Johannes & Knoechel, Susanne, Aug 2011.Research output: Contribution to conference › Poster › Research
- Published
Bias in bacterial diversity as a result of Nycodenz extraction from bulk soil
Holmsgaard, P. N., Norman, A., Hede, S. C., Poulsen, P. H. B., Al-Soud, W. A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 14 Jul 2011, In: Soil Biology & Biochemistry. 43, 10, p. 2152-2159 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Applicability of GFP microbial whole cell biosensors to bioreactor operations: mathematical modeling and related experimental tools
Delvigne, F., Brognaux, A., Gorret, N., Sørensen, Søren Johannes, Michel, C. & Thonart, P., Jul 2011, Biosensors - Emerging Materials and Applications. Serra, P. A. (ed.). Rijeka, Croatia: InTech, p. 601-630 30 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Design and Synthesis of a Quintessential Self-Transmissible IncX1 Plasmid, pX1.0
Hansen, Lars Hestbjerg, Bentzon-Tilia, M., Bentzon-Tilia, S., Norman, A., Rafty, L. & Sørensen, Søren Johannes, May 2011, In: P L o S One. 6, 5, 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Diversity and characterization of mercury-resistant bacteria in snow, freshwater and sea-ice brine from the High Arctic
Møller, A., Barkay, T., Abu Al-Soud, W., Sørensen, Søren Johannes, Skov, H. & Kroer, Niels, 1 Mar 2011, In: F E M S Microbiology Ecology. 75, 3, p. 390-401 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extrachromosomal replicons:
Sørensen, Søren Johannes, 2011, Lewin's GENES X. Lewin, B., Krebs, J. E., Goldstein, E. S., Kilpatrick, S. T. & Goldstein, E. S. (eds.). 10th ed ed. Sudbury, Mass. : Jones and Bartlett Publishers, p. 282-298 16 p. (Jones and Bartlett books in computer science).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education
- Published
Ambient UV-B radiation reduces PSII performance and net photosynthesis in high Arctic Salix arctica
Albert, K. R., Mikkelsen, T. N., Ro-Poulsen, Helge, Arndal, M. F. & Michelsen, Anders, 2011, In: Environmental and Experimental Botany. 73, p. 10-18 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Unexpected Location of the Arginine Catabolic Mobile Element (ACME) in a USA300-Related MRSA Strain
Bartels, Mette Damkjær, Hansen, Lars Hestbjerg, Boye, K., Sørensen, Søren Johannes & Westh, Henrik T., 2011, In: P L o S One. 6, 1, 5 p., e16193.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Archaeal CRISPR-based immune systems: exchangeable functional modules
Garrett, Roger Antony, Vestergaard, G. A. & Shah, S. A., 2011, In: Trends in Microbiology. 19, 11, p. 549-56 8 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Biofilms in soil
Burmølle, Mette, Kjøller, Annelise Helene & Sørensen, Søren Johannes, 2011, Encyclopedia of agrophysics. Springer, p. 70-75 6 p. (Encyclopedia of Earth Sciences Series).Research output: Chapter in Book/Report/Conference proceeding › Encyclopedia chapter › Research › peer-review
- Published
Characterization of bacterial populations in Danish raw milk cheeses made with different starter cultures by denaturating gradient gel electrophoresis and pyrosequencing
Masoud, W. M. H., Takamiya, M. K. W., Vogensen, Finn Kvist, Lillevang, S., Abu Al-Soud, W., Sørensen, Søren Johannes & Jakobsen, M., 2011, In: International Dairy Journal. 21, 3, p. 142-148 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Comparison of aerobic and anaerobic [3H]leucine incorporation assays for determining pollution-induced bacterial community tolerance in copper-polluted, irrigated soils
Aaen, K. N., Holm, Peter Engelund, Priemé, Anders, Hung, N. N. & Brandt, Kristian Koefoed, 2011, In: Environmental Toxicology and Chemistry. 30, 3, p. 588-595 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Construction of biosensors to investigate physiological diversity in fermentation processes
Han, S., Lundin, L. & Sørensen, Søren Johannes, 2011.Research output: Contribution to conference › Poster › Research
- Published
Deletion of the topoisomerase III gene in the hyperthermophilic archaeon Sulfolobus islandicus results in slow growth and defects in cell cycle control
Li, X., Guo, L., Deng, Ling, Feng, D., Ren, Y., Chu, Y., She, Q. & Huang, L., 2011, In: Journal of Genetics and Genomics. 38, 6, p. 253-9 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effects of elevated atmospheric CO2, prolonged summer drought and temperature increase on N2O and CH4 fluxes in a temperate heathland
Carter, M. S., Ambus, Per Lennart, Albert, K. R., Larsen, Klaus Steenberg, Andersson, M., Priemé, Anders, van der Linden, L. & Beier, Claus, 2011, In: Soil Biology & Biochemistry. 43, 8, p. 1660-1670 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Effects of hot water extraction and fungal decay on wood crystalline cellulose structure
Howell, C., Hastrup, A. C. S., Jara, R., Larsen, F. H., Goodell, B. & Jellison, J., 2011, In: Cellulose. 18, 5, p. 1179-1190 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Endolithic chlorophyll d-containing phototrophs
Behrendt, L., Larkum, A. W. D., Norman, A., Qvortrup, Klaus, Chen, M., Ralph, P., Sørensen, Søren Johannes, Trampe, Erik & Kühl, Michael, 2011, In: I S M E Journal. 5, 6, p. 1072-6 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Experimental methods and modeling techniques for description of cell population heterogeneity
Lencastre Fernandes, R., Nierychlo, M., Lundin, L., Pedersen, A. E., Tellez, P. E. P., Dutta, A., Carlquist, M., Bolic, A., Schäpper, D., Brunetti, A. C., Helmark, S., Heins, A-L., Jensen, A. D., Nopens, I., Rottwitt, K., Szita, N., Elsas, J. D. V., Nielsen, P. H., Martinussen, J., Sørensen, S. J. & 2 others, , 2011, In: Biotechnology Advances. 29, 6, p. 575-599 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fluoroquinolone resistance mechanisms in urinary tract pathogenic Escherichia coli isolated during rapidly increasing fluoroquinolone consumption in a low-use country
Christiansen, N., Nielsen, L., Jakobsen, L., Stegger, M., Hansen, Lars Hestbjerg & Frimodt-Moller, N., 2011, In: Microbial Drug Resistance. 17, 3, p. 395-406 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genotype and SNP calling from next-generation sequencing data
Nielsen, Rasmus, Paul, J. S., Albrechtsen, Anders & Song, Y. S., 2011, In: Nature Reviews. Genetics. 12, 6, p. 443-451 9 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Green fluorescent protein (GFP) leakage from microbial biosensors provides useful information for the evaluation of the scale-down effect
Delvigne, F., Brognaux, A., Francis, F., Twizere, J., Gorret, N., Sørensen, Søren Johannes & Thonart, P., 2011, In: Biotechnology Journal. 6, 8, p. 968-978 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of diversity of plasmids carrying the blaTEM-52 gene
Bielak, E. M., Bergenholtz, R. D., Jørgensen, M. S., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Hasman, H., 2011, In: Journal of Antimicrobial Chemotherapy. 66, 11, p. 2465-74 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability
Riber, Leise, Charbon, G., Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2011.Research output: Contribution to conference › Poster › Research › peer-review
- Published
Long-term addition of fertilizer, labile carbon, and fungicide alters the biomass of plant functional groups in a subarctic-alpine community
Haugwitz-Hardenberg-Reventlow, M. S. & Michelsen, Anders, 2011, In: Plant Ecology. 212, 4, p. 715-726 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Long-term microbial control of nutrient availability and plant biomass in a subarctic-alpine heath after addition of carbon, fertilizer and fungicide
Haugwitz-Hardenberg-Reventlow, M. S., Michelsen, Anders & Schmidt, Inger Kappel, 2011, In: Soil Biology & Biochemistry. 43, 1, p. 179-187 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nitrogenase gene amplicons from global marine surface waters are dominated by genes of non-cyanobacteria
Farnelid, H., Andersson, A. F., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Steward, G. F., Hagström, Å. & Riemann, Lasse, 2011, In: P L o S One. 6, 4, p. e19223 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Non-enzymatic depolymerization of cotton cellulose by fungal mimicking metabolites
Hastrup, A. C. S., Howell, C., Jensen, B. & Green, F., 2011, In: International Biodeterioration and Biodegradation. 65, 3, p. 553-559 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Parasites of the shore crab Carcinus maenas (L.): implications for reproductive potential and invasion success
Zetlmeisl, C., Hermann, J., Petney, T., Glenner, Henrik, Griffiths, C. & Taraschewski, H., 2011, In: Parasitology. 138, 03, p. 394-401 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Predominant genera of fecal microbiota in children with atopic dermatitis are not altered by intake of probiotic bacteria Lactobacillus acidophilus NCFM and Bifidobacterium animalis subsp.lactis Bi-07
Larsen, Nadja, Vogensen, Finn Kvist, Gøbel, R. J., Michaelsen, Kim F., Abu Al-Soud, W., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2011, In: FEMS Microbiology Ecology. 75, 3, p. 482-496 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantitative metagenomic analyses based on average genome size normalization
Frank, J. A. & Sørensen, Søren Johannes, 2011, In: Applied and Environmental Microbiology. 77, 7, p. 2513-2521 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reduced N cycling in response to elevated CO2, warming, and drought in a Danish heathland
Larsen, K. S., Andresen, L. C., Beier, C., Jonasson, S. E., Albert, K. R., Ambus, P. L., Arndal, M. F., Carter, M. S., Christensen, S., Holmstrup, M., Ibrom, A., Nielsen, J. K., van der Linden, L., Maraldo, K., Michelsen, A., Mikkelsen, T. N., Pilegaard, K., Priemé, A., Ro-Poulsen, H., Schmidt, I. K. & 2 others, , 2011, Nitrogen & global change: key findings - future challenges. 2 p.Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research
- Published
Reduced N cycling in response to elevated CO2, warming, and drought in a Danish heathland: synthesizing results of the CLIMAITE project after two years of treatments
Larsen, K. S., Andresen, L. C., Beier, C., Jonasson, S. E., Albert, K. A., Ambus, P. L., Arndal, M. F., Carter, M. S., Christensen, S., Holmstrup, M., Ibrom, A., Nielsen, J. K., Van der Linden, L., Maraldo, K., Michelsen, A., Mikkelsen, T. N., Pilegaard, K., Priemé, A., Ro-Poulsen, H., Schmidt, I. K. & 2 others, , 2011, In: Global Change Biology. 17, 5, p. 1884-1899 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Pedersen, P. D., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.Research output: Contribution to conference › Poster › Research
- Published
Sequence and comparative analysis of Leuconostoc dairy bacteriophages
Kot, Witold, Hansen, Lars Hestbjerg, Neve, H., Hammer, K., Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2011. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
The first record of "spelaeoid" bears in Arctic Siberia
Sher, A. V., Weinstock Arenovitz, J., Baryshnikov, G. F., Davydov, S. P., Boeskorov, G. G., Zazhigin, V. S. & Nikolskiy, P. A., 2011, In: Quaternary Science Reviews. 30, 17-18, p. 2238-2249 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Triclosan affects the microbial community in simulated sewage-drain-field soil and slows down xenobiotic degradation
Svenningsen, H., Henriksen, T., Priemé, Anders & Johnsen, A. R., 2011, In: Environmental Pollution. 159, 6, p. 1599-1605 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
West Africa´s savannahs under change: integrated view on positive and negative effects of agriculture and land cover changes on carbon cycling and trace gas emission
Nacro, H. B., Struwe, Sten, Abbadie, L., Abekoe , K. M., Andersson, M., Attua, E. M., Badiane, A., Bilbao, B., Bonzi, M., Danso, S. K. A., Gignoux, J., Lensi , R., Khouma, M., Kjøller, Annelise Helene, Konaté, S., Manlay, M., Neill, C., Ouattara, B. & Tondoh, E. J., 2011, Africa and the Carbon Cycle: Proceedings of the Open Science Conference on “Africa and Carbon Cycle: the CarboAfrica project” : Accra (Ghana) 25-27 November 2008. Food and Agriculture Organization of the United Nations, p. 55-61 7 p. (Food and Agriculture Organization of the United Nations. World Soil Resources Reports; No. 105).Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research
- 2010
- Published
Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing
Holmsgaard, P. N., Poulsen, P., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Nov 2010.Research output: Contribution to conference › Poster › Research
- Published
Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Filed Trial
Li, L., Bergmark, L., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Norman, A. & Sørensen, Søren Johannes, Nov 2010.Research output: Contribution to conference › Poster › Research
- Published
The effect of L. acidophilus NCFM intake on insulin sensitivity and gut microbiota: a randomized placebo-controlled trial
Larsen, Nadja, Andreasen, A. S., Pedersen-Skovsgaard, T., Møller, K., van den Berg, F. W. J., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg, Nielsen, Dennis Sandris, Vogensen, Finn Kvist, Pedersen, Bente Klarlund & Jakobsen, M., Sep 2010.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
- Published
Bias in Nycodenz extraction from bulk soil analysed by amplicon high throughput sequencing
Holmsgaard, P. N., Poulsen, P. H. B., Hede, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
Metamobilomics - Expanding the environmental mobilome with high throughput sequencing
Norman, A., Li, L., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
The Diversity of cultural and uncultrural Pseudomonas in an Urban Waste Field Trial
Li, L., Bergmark, L., Abu Al-Soud, W., Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, Aug 2010.Research output: Contribution to conference › Poster › Research
- Published
Changing Influences on Childhood Obesity: A Study of 2 Generations of the 1958 British Birth Cohort
Pinot de Moira, Angela, Power, C. & Li, L., May 2010, In: American Journal of Epidemiology.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Probing Barophilic Microbial Communities for Novel Proteolytic Enzymes
Frank, J. A., Hansen, M. A. & Sørensen, Søren Johannes, May 2010.Research output: Contribution to conference › Poster › Research
- Published
Ancient human genome sequence of an extinct Palaeo-Eskimo
Rasmussen, M., Li, Y., Lindgreen, S., Pedersen, J. S., Albrechtsen, A., Moltke, I., Metspalu, M., Metspalu, E., Kivisild, T., Gupta, R., Bertalan, M., Nielsen, K., Gilbert, T., Wang, Y., Raghavan, M., Campos, P., Kamp, H. L. M., Wilson, A. S., Gledhill, A., Tridico, S. & 32 others, , 11 Feb 2010, In: Nature. 463, 7282, p. 757-762 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The DNA methylome of human peripheral blood mononuclear cells
Li, Y., Zhu, J., Tian, G., Li, N., Li, Q., Ye, M., Zheng, H., Yu, J., Wu, H., Sun, J., Zhang, H., Chen, Q., Luo, R., Chen, M., He, Y., Jin, X., Zhang, Q., Yu, C., Zhou, G., Sun, J. & 17 others, , 1 Jan 2010, In: PLoS - Biology. 8, 11, p. e1000533-e1000533Research output: Contribution to journal › Journal article › Research › peer-review
- Published
All equal, all different?
Han, S., Lundin, L. & Sørensen, Søren Johannes, 2010.Research output: Contribution to conference › Poster › Research
- Published
Biofilms in chronic infections - a matter of opportunity - monospecies biofilms in multispecies infections
Burmølle, Mette, Thomsen, T. R., Fazli, M., Dige, I., Christensen, L., Homøe, Preben, Tvede, M., Nyvad, B., Tolker-Nielsen, Tim, Givskov, Michael, Moser, Claus Ernst, Kirketerp-Møller, K., Johansen, Helle Krogh, Høiby, Niels, Jensen, Peter Østrup, Sørensen, Søren Johannes & Bjarnsholt, Thomas, 2010, In: FEMS Immunology and Medical Microbiology. 59, 3, p. 324-336 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Centre for Anti-resistance; Limiting the occurrence of antimicrobial resistance through targeted interventions directed at plasmid transfer and stability
Riber, Leise, Burmølle, Mette, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2010.Research output: Contribution to conference › Poster › Research
- Published
Detection of Helicobacter rodentium-like DNA in the liver tissue of patients with chronic liver diseases by polymerase chain reaction-denaturing gradient gel electrophoresis and DNA sequence analysis
Nakonieczna, J., Stalke, P., Abu Al-Soud, W., Wadstrom, T. & Bielawski, K. P., 2010, In: Diagnostic Microbiology and Infectious Disease. 68, 3, p. 201-207 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Getting the best out of long-wavelength X-rays: de novo chlorine/sulfur SAD phasing of a structural protein from ATV
Goulet, A., Vestergaard, G. A., Felisberto-Rodrigues, C., Campanacci, V., Garrett, Roger Antony, Cambillau, C. & Ortiz-Lombardía, M., 2010, In: Acta Crystallographica. Section D: Biological Crystallography. 66, Pt 3, p. 304-308 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
Larsen, Nadja, Vogensen, Finn Kvist, van der Berg, Franciscus Winfried J, Nielsen, Dennis Sandris, Andreasen, Anne Sofie, Pedersen, Bente Klarlund, Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010, In: PLoS ONE. 5, 2, p. e9085 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigation of the fate and effects of acetyl cedrene on Capitella teleta and sediment bacterial community
Ellegaard-Jensen, L., Selck, H., Priemé, Anders, Salvito, D. & Forbes, V. E., 2010, In: Ecotoxicology. 19, 6, p. 1046-1058 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
New ecological niches and habitats for Chlorophyll d- containing cyanobacteria
Behrendt, L., Chen, M., Larkum, A. W. D., Ralph, P. J., Sørensen, Søren Johannes, Trampe, E. & Kühl, Michael, 2010.Research output: Contribution to conference › Poster › Research
- Published
The gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
Nielsen, Dennis Sandris, Larsen, Nadja, Vogensen, Finn Kvist, van den Berg, F. W. J., Andreasen, A. S., Pedersen, B. K., Abu Al-Soud, W. M. A. F., Sørensen, Søren Johannes, Hansen, Lars Hestbjerg & Jakobsen, M., 2010. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
The nitrogenase gene pool in surface waters of the global ocean is dominated by genes of non-cyanobacteria
Farnelid, H., Andersson, A., Bertilsson, S., Abu Al-Soud, W., Hansen, Lars Hestbjerg, Sørensen, Søren Johannes, Hagström & Riemann, Lasse, 2010.Research output: Contribution to conference › Poster › Research
- 2009
- Published
A new baleen whale from the Late Miocene of Denmark and early mysticete hearing
Steeman, M. E., 2009, In: Palaeontology. 52, 5, p. 1169-1190Research output: Contribution to journal › Journal article › Research › peer-review
- Published
All IncP-1 plasmid subgroups, including the novel e subgroup, are prevalent in the influent of a Danish wastewater treatment plant
Bahl, M. I., Burmølle, Mette, Meisner, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Plasmid. 62, 2, p. 134-139 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution
Willerslev, Eske, Gilbert, M Thomas P, Binladen, J., Ho, S. Y. W., Campos, P. F., Ratan, A., Tomsho, L. P., da Fonseca, R. R., Sher, A., Kuznetsova, T. V., Nowak-Kemp, M., Roth, T. L., Miller, W. & Schuster, S. C., 2009, In: BMC Evolutionary Biology. 9, p. 95Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians
Malmström, H., Gilbert, M Thomas P, Thomas, M. G., Brandström, M., Storå, J., Molnar, P., Andersen, P. K., Bendixen, C., Holmlund, G., Götherström, A. & Willerslev, Eske, 2009, In: Current Biology. 19, 20, p. 1758-62 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient DNA reveals late survival of mammoth and horse in interior Alaska
Haile, James Seymour, Froese, D. G., Macphee, R. D. E., Roberts, R. G., Arnold, L. J., Reyes, A. V., Rasmussen, M., Nielsen, Rasmus, Brook, B. W., Robinson, S., Demuro, M., Gilbert, M Thomas P, Munch, K., Austin, J. J., Cooper, A., Barnes, I., Möller, P. & Willerslev, Eske, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 52, p. 22352-7 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Application of full mitochondrial genome sequencing using 454 GS FLX pyrosequencing
Mikkelsen, M., Rockenbauer, Eszter, Wächter, A., Fendt, L., Zimmermann, B., Parson, W., Nielsen, S. A., Gilbert, M Thomas P, Willerslev, Eske & Morling, Niels, 2009, Progress in Forensic Genetics 13: Proceedings of the 23rd International ISFG Congress. Morling, N. (ed.). Elsevier, Vol. 2. p. 518 - 519 2 p. (Forensic Science International: Genetics Supplement Series; No. 1, Vol. 2).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
- Published
Autophagic components contribute to hypersensitive cell death in Arabidopsis
Hofius, D., Schultz-Larsen, T., Joensen, J., Tsitsigiannis, D. I., Petersen, N. H. T., Mattsson, O., Jørgensen, L. B., Jones, J. D. G., Mundy, J. & Petersen, Morten, 2009, In: Cell. 137, 4, p. 773-83 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Botanisk Laboratorium - over 100 år i botanikkens tjeneste
Seberg, Ole & Frederiksen, S. E., 2009, In: URT. 2009, 1, p. 23-33 11 p.Research output: Contribution to journal › Journal article › Research
- Published
CRISPR families of the crenarchaeal genus Sulfolobus: bidirectional transcription and dynamic properties
Lillestøl, R. K., Shah, S. A., Brügger, K., Redder, P., Phan, Safir Hien, Christiansen, Jan & Garrett, Roger Antony, 2009, In: Molecular Microbiology. 72, 1, p. 259-272Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Camillea (Xylariaceae, Ascomycota), including two new species, along a trans-Andean altitude gradient in Ecuador
Hastrup, A. C. S. & Læssøe, Thomas, 2009, In: Mycological Progress. 8, 4, p. 305-316 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of genetic determinants of extended-spectrum cephalosporinases (ESCs) in Escherichia coli isolates from Danish and imported poultry meat
Bergenholtz, R. D., Jørgensen, M. S., Hansen, Lars Hestbjerg, Jensen, L. B. & Hasman, H., 2009, In: Journal of Antimicrobial Chemotherapy. 64, 1, p. 207-209 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conjugative plasmids: Vessels of the communal gene pool
Norman, A., Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2009, In: Philosophical Transactions of the Royal Society of London. Biological Sciences. 364, 1527, p. 2275-2289 15 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Construction and Use of Flow Cytometry Optimized Plasmid-Sensor Strains: Genomes in Flux
Bahl, M. I., Oregaard, G., Sørensen, Søren Johannes & Hansen, Lars Hestbjerg, 2009, Horizontal Gene Transfer. Gogarten, M. B., Gogarten, J. P. & Olendzenski, L. C. (eds.). Humana Press, Vol. 532. p. 257-268 (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
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Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
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Sequence and comparative analysis of Leuconostoc dairy bacteriophages
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Extreme emission of n2o from tropical wetland soil (pantanal, South America)
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Latest publications
Optimizing cleaning strategies for biofouling in reverse osmosis membrane systems: A comparative study using a self-formed instrument
Research output: Contribution to journal › Journal article › Research › peer-review
Interphylum dissemination of NDM-5-positive plasmids in hospital wastewater from Fuzhou, China: a single-centre, culture-independent, plasmid transmission study
Research output: Contribution to journal › Journal article › Research › peer-review
Using Nanopore Sequencing Deciphering Antibiotic Resistance Dissemination In The Wastewater Systems
Research output: Book/Report › Ph.D. thesis › Research