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Critical Assessment of Metagenome Interpretation : a benchmark of metagenomics software. / Sczyrba, Alexander; Hofmann, Peter; Belmann, Peter; Koslicki, David; Janssen, Stefan; Dröge, Johannes; Gregor, Ivan; Majda, Stephan; Fiedler, Jessika; Dahms, Eik; Bremges, Andreas; Fritz, Adrian; Garrido-Oter, Ruben; Jørgensen, Tue Sparholt; Shapiro, Nicole; Blood, Philip D.; Gurevich, Alexey; Bai, Yang; Turaev, Dmitrij; DeMaere, Matthew Z.; Chikhi, Rayan; Nagarajan, Niranjan; Quince, Christopher; Meyer, Fernando; Balvociute, Monika; Hansen, Lars Hestbjerg; Sørensen, Søren Johannes; Chia, Burton K. H.; Denis, Bertrand; Froula, Jeff L.; Wang, Zhong; Egan, Robert; Kang, Dongwan Don; Cook, Jeffrey J.; Deltel, Charles; Beckstette, Michael; Lemaitre, Claire; Peterlongo, Pierre; Rizk, Guillaume; Lavenier, Dominique; Wu, Yu-Wei; Singer, Steven W.; Jain, Chirag; Strous, Marc; Klingenberg, Heiner; Meinicke, Peter; Barton, Michael D.; Lingner, Thomas; Lin, Hsin-Hung; Liao, Yu-Chieh; Silva, Genivaldo Gueiros Z.; Cuevas, Daniel A.; Edwards, Robert A.; Saha, Surya; Piro, Vitor C.; Renard, Bernhard Y.; Pop, Mihai; Klenk, Hans-Peter; Göker, Markus; Kyrpides, Nikos C.; Woyke, Tanja; Vorholt, Julia A.; Schulze-Lefert, Paul; Rubin, Edward M.; Darling, Aaron E.; Rattei, Thomas; McHardy, Alice C.
In:
Nature Methods, Vol. 14, No. 11, 2017, p. 1063-1071.
Research output: Contribution to journal › Journal article › Research › peer-review
Harvard
Sczyrba, A, Hofmann, P, Belmann, P, Koslicki, D, Janssen, S, Dröge, J, Gregor, I, Majda, S, Fiedler, J, Dahms, E, Bremges, A, Fritz, A, Garrido-Oter, R, Jørgensen, TS, Shapiro, N, Blood, PD, Gurevich, A, Bai, Y, Turaev, D, DeMaere, MZ, Chikhi, R, Nagarajan, N, Quince, C, Meyer, F, Balvociute, M, Hansen, LH
, Sørensen, SJ, Chia, BKH, Denis, B, Froula, JL, Wang, Z, Egan, R, Kang, DD, Cook, JJ, Deltel, C, Beckstette, M, Lemaitre, C, Peterlongo, P, Rizk, G, Lavenier, D, Wu, Y-W, Singer, SW, Jain, C, Strous, M, Klingenberg, H, Meinicke, P, Barton, MD, Lingner, T, Lin, H-H, Liao, Y-C, Silva, GGZ, Cuevas, DA, Edwards, RA, Saha, S, Piro, VC, Renard, BY, Pop, M, Klenk, H-P, Göker, M, Kyrpides, NC, Woyke, T, Vorholt, JA, Schulze-Lefert, P, Rubin, EM, Darling, AE, Rattei, T & McHardy, AC 2017, '
Critical Assessment of Metagenome Interpretation: a benchmark of metagenomics software',
Nature Methods, vol. 14, no. 11, pp. 1063-1071.
https://doi.org/10.1038/NMETH.4458APA
Sczyrba, A., Hofmann, P., Belmann, P., Koslicki, D., Janssen, S., Dröge, J., Gregor, I., Majda, S., Fiedler, J., Dahms, E., Bremges, A., Fritz, A., Garrido-Oter, R., Jørgensen, T. S., Shapiro, N., Blood, P. D., Gurevich, A., Bai, Y., Turaev, D., ... McHardy, A. C. (2017).
Critical Assessment of Metagenome Interpretation: a benchmark of metagenomics software.
Nature Methods,
14(11), 1063-1071.
https://doi.org/10.1038/NMETH.4458Vancouver
Sczyrba A, Hofmann P, Belmann P, Koslicki D, Janssen S, Dröge J et al.
Critical Assessment of Metagenome Interpretation: a benchmark of metagenomics software.
Nature Methods. 2017;14(11):1063-1071.
https://doi.org/10.1038/NMETH.4458Author
Sczyrba, Alexander ; Hofmann, Peter ; Belmann, Peter ; Koslicki, David ; Janssen, Stefan ; Dröge, Johannes ; Gregor, Ivan ; Majda, Stephan ; Fiedler, Jessika ; Dahms, Eik ; Bremges, Andreas ; Fritz, Adrian ; Garrido-Oter, Ruben ; Jørgensen, Tue Sparholt ; Shapiro, Nicole ; Blood, Philip D. ; Gurevich, Alexey ; Bai, Yang ; Turaev, Dmitrij ; DeMaere, Matthew Z. ; Chikhi, Rayan ; Nagarajan, Niranjan ; Quince, Christopher ; Meyer, Fernando ; Balvociute, Monika ; Hansen, Lars Hestbjerg ; Sørensen, Søren Johannes ; Chia, Burton K. H. ; Denis, Bertrand ; Froula, Jeff L. ; Wang, Zhong ; Egan, Robert ; Kang, Dongwan Don ; Cook, Jeffrey J. ; Deltel, Charles ; Beckstette, Michael ; Lemaitre, Claire ; Peterlongo, Pierre ; Rizk, Guillaume ; Lavenier, Dominique ; Wu, Yu-Wei ; Singer, Steven W. ; Jain, Chirag ; Strous, Marc ; Klingenberg, Heiner ; Meinicke, Peter ; Barton, Michael D. ; Lingner, Thomas ; Lin, Hsin-Hung ; Liao, Yu-Chieh ; Silva, Genivaldo Gueiros Z. ; Cuevas, Daniel A. ; Edwards, Robert A. ; Saha, Surya ; Piro, Vitor C. ; Renard, Bernhard Y. ; Pop, Mihai ; Klenk, Hans-Peter ; Göker, Markus ; Kyrpides, Nikos C. ; Woyke, Tanja ; Vorholt, Julia A. ; Schulze-Lefert, Paul ; Rubin, Edward M. ; Darling, Aaron E. ; Rattei, Thomas ; McHardy, Alice C. / Critical Assessment of Metagenome Interpretation : a benchmark of metagenomics software. In: Nature Methods. 2017 ; Vol. 14, No. 11. pp. 1063-1071.
Bibtex
@article{34e3af347c1c478c9f269d85c98e4c12,
title = "Critical Assessment of Metagenome Interpretation: a benchmark of metagenomics software",
author = "Alexander Sczyrba and Peter Hofmann and Peter Belmann and David Koslicki and Stefan Janssen and Johannes Dr{\"o}ge and Ivan Gregor and Stephan Majda and Jessika Fiedler and Eik Dahms and Andreas Bremges and Adrian Fritz and Ruben Garrido-Oter and J{\o}rgensen, {Tue Sparholt} and Nicole Shapiro and Blood, {Philip D.} and Alexey Gurevich and Yang Bai and Dmitrij Turaev and DeMaere, {Matthew Z.} and Rayan Chikhi and Niranjan Nagarajan and Christopher Quince and Fernando Meyer and Monika Balvociute and Hansen, {Lars Hestbjerg} and S{\o}rensen, {S{\o}ren Johannes} and Chia, {Burton K. H.} and Bertrand Denis and Froula, {Jeff L.} and Zhong Wang and Robert Egan and Kang, {Dongwan Don} and Cook, {Jeffrey J.} and Charles Deltel and Michael Beckstette and Claire Lemaitre and Pierre Peterlongo and Guillaume Rizk and Dominique Lavenier and Yu-Wei Wu and Singer, {Steven W.} and Chirag Jain and Marc Strous and Heiner Klingenberg and Peter Meinicke and Barton, {Michael D.} and Thomas Lingner and Hsin-Hung Lin and Yu-Chieh Liao and Silva, {Genivaldo Gueiros Z.} and Cuevas, {Daniel A.} and Edwards, {Robert A.} and Surya Saha and Piro, {Vitor C.} and Renard, {Bernhard Y.} and Mihai Pop and Hans-Peter Klenk and Markus G{\"o}ker and Kyrpides, {Nikos C.} and Tanja Woyke and Vorholt, {Julia A.} and Paul Schulze-Lefert and Rubin, {Edward M.} and Darling, {Aaron E.} and Thomas Rattei and McHardy, {Alice C.}",
year = "2017",
doi = "10.1038/NMETH.4458",
language = "English",
volume = "14",
pages = "1063--1071",
journal = "Nature Methods",
issn = "1548-7091",
publisher = "nature publishing group",
number = "11",
}
RIS
TY - JOUR
T1 - Critical Assessment of Metagenome Interpretation
T2 - a benchmark of metagenomics software
AU - Sczyrba, Alexander
AU - Hofmann, Peter
AU - Belmann, Peter
AU - Koslicki, David
AU - Janssen, Stefan
AU - Dröge, Johannes
AU - Gregor, Ivan
AU - Majda, Stephan
AU - Fiedler, Jessika
AU - Dahms, Eik
AU - Bremges, Andreas
AU - Fritz, Adrian
AU - Garrido-Oter, Ruben
AU - Jørgensen, Tue Sparholt
AU - Shapiro, Nicole
AU - Blood, Philip D.
AU - Gurevich, Alexey
AU - Bai, Yang
AU - Turaev, Dmitrij
AU - DeMaere, Matthew Z.
AU - Chikhi, Rayan
AU - Nagarajan, Niranjan
AU - Quince, Christopher
AU - Meyer, Fernando
AU - Balvociute, Monika
AU - Hansen, Lars Hestbjerg
AU - Sørensen, Søren Johannes
AU - Chia, Burton K. H.
AU - Denis, Bertrand
AU - Froula, Jeff L.
AU - Wang, Zhong
AU - Egan, Robert
AU - Kang, Dongwan Don
AU - Cook, Jeffrey J.
AU - Deltel, Charles
AU - Beckstette, Michael
AU - Lemaitre, Claire
AU - Peterlongo, Pierre
AU - Rizk, Guillaume
AU - Lavenier, Dominique
AU - Wu, Yu-Wei
AU - Singer, Steven W.
AU - Jain, Chirag
AU - Strous, Marc
AU - Klingenberg, Heiner
AU - Meinicke, Peter
AU - Barton, Michael D.
AU - Lingner, Thomas
AU - Lin, Hsin-Hung
AU - Liao, Yu-Chieh
AU - Silva, Genivaldo Gueiros Z.
AU - Cuevas, Daniel A.
AU - Edwards, Robert A.
AU - Saha, Surya
AU - Piro, Vitor C.
AU - Renard, Bernhard Y.
AU - Pop, Mihai
AU - Klenk, Hans-Peter
AU - Göker, Markus
AU - Kyrpides, Nikos C.
AU - Woyke, Tanja
AU - Vorholt, Julia A.
AU - Schulze-Lefert, Paul
AU - Rubin, Edward M.
AU - Darling, Aaron E.
AU - Rattei, Thomas
AU - McHardy, Alice C.
PY - 2017
Y1 - 2017
U2 - 10.1038/NMETH.4458
DO - 10.1038/NMETH.4458
M3 - Journal article
VL - 14
SP - 1063
EP - 1071
JO - Nature Methods
JF - Nature Methods
SN - 1548-7091
IS - 11
ER -
