Department of Biology

 

 
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  1. 2020
  2. Published

    Phylogenetic conservatism and biogeographic affinity influence woody plant species richness-climate relationships in eastern Eurasia

    Su, X., Shrestha, N., Xu, X., Sandanov, D., Wang, Q., Wang, S., Dimitrov, D. & Wang, Z., Jul 2020, In: Ecography. 43, 7, p. 1027-1040 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Interspecific interactions in dual-species biofilms of soil bacteria: effects of fertilization practices

    Sun, X., Cai, P., Sørensen, Søren Johannes, Mortimer, M., Gao, C., Huang, Q., Wang, Y., Lin, X., Wu, Y., Zhu, D. & Chen, R., 2020, In: Journal of Soils and Sediments. 20, 3, p. 1494-1501 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Genetic and clinical analysis in Chinese patients with retinitis pigmentosa caused by EYS mutations

    Sun, Y., Li, J., He, W., Wang, Z., Bai, J., Xu, L., Xing, B., Zhang, J., Wang, L., Li, W. & Chen, F., 2020, In: Molecular Genetics and Genomic Medicine. 8, 3, 9 p., e1117.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Nitrogen fertilizers stimulate desorption and biodegradation of gasoline aromatics in the soil from high Arctic permafrost active layer: a laboratory study

    Sun, Y., Romantschuk, M., Bang-Andreasen, T., Rantalainen, A. L. & Sinkkonen, A., 2020, In: International Biodeterioration and Biodegradation. 150, 9 p., 104957.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Bacteriophages as Biocontrol Agents for Flavobacterium psychrophilum Biofilms and Rainbow Trout Infections

    Sundell, K., Landor, L., Castillo, D., Middelboe, Mathias & Wiklund, T., 2020, In: PHAGE: Therapy, Applications, and Research. 1, 4, p. 198-204 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Structural basis of client specificity in mitochondrial membrane-protein chaperones

    Sučec, I., Wang, Y., Dakhlaoui, O., Weinhäupl, K., Jores, T., Costa, D., Hessel, A., Brennich, M., Rapaport, D., Lindorff-Larsen, Kresten, Bersch, B. & Schanda, P., 2020, In: Science Advances. 6, 51, 15 p., eabd0263.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Scramble-in: A fast and efficient method to diversify and improve the yields of heterologous pathways in synthetic yeast

    Swidah, R., Auxillos, Jamie Yam, Liu, W., Jones, S., Chan, T. F., Dai, J. & Cai, Y., 2020, Methods in Molecular Biology. Humana Press, p. 305-327 23 p. (Methods in Molecular Biology, Vol. 2205).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  9. Published

    Fysisk design af nye søer kan reducere fosforpuljen og tilgodese biodiversiteten

    Sø, Jonas Stage, Kragh, T. & Sand-Jensen, Kaj, 2020, In: Vand & Jord. 27, 4, p. 142-145

    Research output: Contribution to journal › Journal article › Communication

  10. Published

    Temporal development of biodiversity of macrophytes in newly established lakes

    Sø, Jonas Stage, Sand-Jensen, Kaj & Båstrup-Spohr, Lars, 2020, In: Freshwater Biology. 65, 3, p. 379-389

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Description, redescription and revision of sixteen putatively closely related species of Echinoderes (Kinorhyncha: Cyclorhagida), with the proposition of a new species group - the Echinoderes dujardinii group

    Sørensen, Martin Vinther, Goetz, F. E., Herranz, Maria, Chang, C. Y., Chatterjee, T., Durucan, F., Neves, R. C., Yildiz, N. Ö., Norenburg, J. & Yamasaki, H., 2020, In: European Journal of Taxonomy. 730, p. 1-101 101 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The entangled dynamics of eucalypt leaf and flower volatile emissions

    Sørensen, Mette, Rinnan, Riikka, Woodrow, I., Møller, Birger Lindberg & Neilson, Elizabeth Heather Jakobsen, 2020, In: Environmental and Experimental Botany. 176, 14 p., 104032.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    High cell densities favor lysogeny: induction of an H20 prophage is repressed by quorum sensing and enhances biofilm formation in Vibrio anguillarum

    Tan, D., Hansen, Mads Frederik, de Carvalho, L. N., Røder, Henriette Lyng, Burmølle, Mette, Middelboe, Mathias & Svenningsen, Sine Lo, 2020, In: The ISME Journal. 14, 7, p. 1731-1742 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Detection of Viable and Total Bacterial Community in the Pit Mud of Chinese Strong-Flavor Liquor Using Propidium Monoazide Combined With Quantitative PCR and 16S rRNA Gene Sequencing

    Tan, G., Zhou, R., Zhang, W., Hu, Y., Ruan, Z., Li, J., Zhang, C., Shen, D., Peng, N., Liang, Y. & Zhao, S., 2020, In: Frontiers in Microbiology. 11, 9 p., 896.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Micromeria zarkosii (Lamiaceae), an unusual new species from Naxos (central Kiklades, Greece)

    Tan, K., Biel, B. & Zieliński, J., 2020, In: Nordic Journal of Botany. 38, 11, 4 p., e02975.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    m6A-dependent biogenesis of circular RNAs in male germ cells

    Tang, C., Xie, Y., Yu, T., Liu, N., Wang, Z., Woolsey, R. J., Tang, Y., Zhang, X., Qin, W., Zhang, Y., Song, G., Zheng, W., Wang, J., Chen, W., Wei, X., Xie, Z., Klukovich, R., Zheng, H., Quilici, D. R. & Yan, W., 2020, In: Cell Research. 30, p. 211-228 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Host Ant Change of a Socially Parasitic Butterfly (Phengaris alcon) through Host Nest Take-Over

    Tartally, A., Somogyi, A. Á., Révész, T. & Nash, David Richard, 2020, In: Insects. 11, 9, 15 p., 556.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    CAncer bioMarker Prediction Pipeline (CAMPP) - A standardized framework for the analysis of quantitative biological data

    Terkelsen, T., Krogh, Anders & Papaleo, E., 2020, In: PLOS Computational Biology. 16, 3, 20 p., e1007665.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Secreted breast tumor interstitial fluid microRNAs and their target genes are associated with triple-negative breast cancer, tumor grade, and immune infiltration

    Terkelsen, T., Russo, F., Gromov, P., Haakensen, V. D., Brunak, Søren, Gromova, I., Krogh, Anders & Papaleo, E., 2020, In: Breast Cancer Research. 22, 1, 36 p., 73.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Effect of insulin on natriuretic peptide gene expression in porcine heart

    Terzic, D., Zois, N. E., Hunter, I., Christoffersen, Christina, Plomgaard, Peter Stendahl, Olsen, Lisbeth Høier, Jørgensen, Stine Ringholm, Pilegaard, Henriette & Goetze, Jens P. , 2020, In: Peptides. 131, 10 p., 170370.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Regulation of Body Size and Growth Control

    Texada, Michael James, Koyama, Takashi & Rewitz, Kim, 2020, In: Genetics. 216, 2, p. 269-313 45 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Declining genetic diversity of European honeybees along the twentieth century

    Themudo, G. E., Rey de la Iglesia, Alba, Tascón, L. R., Jensen, Annette Bruun, Rodrigues da Fonseca, Rute Andreia & Campos, P. F., 29 Jun 2020, In: Scientific Reports. 10, 12 p., 10520.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways

    Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Investigation of transcriptional output and regulation in plants using Cap Analysis of Gene Expression (CAGE)

    Thieffry, A., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 128 p.

    Research output: Book/Report › Ph.D. thesis › Research

  25. Published

    The γ-hydroxybutyric acid (GHB) analogue NCS-382 is a substrate for both monocarboxylate transporters subtypes 1 and 4

    Thiesen, L., Belew, Zeinu Mussa, Griem-Krey, Nane, Pedersen, Stine Helene Falsig, Crocoll, C., Nour-Eldin, Hussam Hassan & Wellendorph, Petrine, 15 Feb 2020, In: European Journal of Pharmaceutical Sciences. 143, p. 1-9 105203.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Global plant trait relationships extend to the climatic extremes of the tundra biome

    Thomas, H. J. D., Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Kattge, J., Diaz, S., Vellend, M., Blok, D., Cornelissen, J. H. C., Forbes, B. C., Henry, G. H. R., Hollister, R. D., Normand, S., Prevéy, J. S., Rixen, C., Schaepman-Strub, G., Wilmking, M., Wipf, S., Cornwell, W. K., Beck, P. S. A. & 85 others, Georges, D., Goetz, S. J., Guay, K. C., Rüger, N., Soudzilovskaia, N. A., Spasojevic, M. J., Alatalo, J. M., Alexander, H. D., Anadon-Rosell, A., Angers-Blondin, S., te Beest, M., Berner, L. T., Björk, R. G., Buchwal, A., Buras, A., Carbognani, M., Christie, K. S., Collier, L. S., Cooper, E. J., Elberling, Bo, Eskelinen, A., Frei, E. R., Grau, O., Grogan, P., Hallinger, M., Heijmans, M. M. P. D., Hermanutz, L., Hudson, J. M. G., Johnstone, J. F., Hülber, K., Iturrate-Garcia, M., Iversen, C. M., Jaroszynska, F., Kaarlejarvi, E., Kulonen, A., Lamarque, L. J., Lantz, T. C., Lévesque, E., Little, C. J., Michelsen, Anders, Milbau, A., Nabe-Nielsen, J., Nielsen, S. S., Ninot, J. M., Oberbauer, S. F., Olofsson, J., Onipchenko, V. G., Petraglia, A., Rumpf, S. B., Shetti, R., Speed, J. D. M., Suding, K. N., Tape, K. D., Tomaselli, M., Trant, A. J., Treier, U. A., Tremblay, M., Venn, S. E., Vowles, T., Weijers, S., Wookey, P. A., Zamin, T. J., Bahn, M., Blonder, B., van Bodegom, P. M., Bond-Lamberty, B., Campetella, G., Cerabolini, B. E. L., Chapin, F. S., Craine, J. M., Dainese, M., Green, W. A., Jansen, S., Kleyer, M., Manning, P., Niinemets, Onoda, Y., Ozinga, W. A., Peñuelas, J., Poschlod, P., Reich, P. B., Sandel, B., Schamp, B. S., Sheremetiev, S. N. & de Vries, F. T., 2020, In: Nature Communications. 11, 1, 12 p., 1351.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Identification of BLNK and BTK as mediators of rituximab-induced programmed cell death by CRISPR screens in GCB-subtype diffuse large B-cell lymphoma

    Thomsen, E. A., Rovsing, A. B., Anderson, M. V., Due, H., Huang, J., Luo, Y., Dybkær, K. & Mikkelsen, J. G., 2020, In: Molecular Oncology. 14, 9, p. 1978-1997 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Deep Learning for Diagnostic Binary Classification of Multiple-Lesion Skin Diseases

    Thomsen, K., Christensen, A. L., Iversen, L., Lomholt, H. B. & Winther, Ole, 2020, In: Frontiers in Medicine. 7, 7 p., 574329.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Systematic review of machine learning for diagnosis and prognosis in dermatology

    Thomsen, K., Iversen, L., Titlestad, T. L. & Winther, Ole, 2020, In: Journal of Dermatological Treatment. 31, 5, p. 496-510

    Research output: Contribution to journal › Review › Research › peer-review

  30. Published

    Analogues of a Cyclic Antimicrobial Peptide with a Flexible Linker Show Promising Activity Against Pseudomonas aeruginosa and Staphylococcus aureus

    Thomsen, T. T., Mendel, H. C., Al-Mansour, W., Oddo, A., Løbner-Olesen, Anders & Hansen, Paul Robert, 2020, In: Antibiotics. 9, 7, 13 p., 366.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Hepatic PGC-1α is not essential for fasting-induced cytochrome p450 regulation in mouse liver

    Thøgersen, R., Maag Kristensen, C., Olsen, M. A., Bertram, H. C., Pilegaard, Henriette & Rasmussen, M. K., 2020, In: Biochemical Pharmacology. 172, 7 p., 113736.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Efficient refolding and reconstitution of tissue factor into nanodiscs facilitates structural investigation of a multicomponent system on a lipid bilayer

    Tidemand, Frederik Grønbæk, Østergaard, H., Ploug, Michael, Kragelund, Birthe Brandt & Arleth, Lise, 2020, In: Biochimica et Biophysica Acta - Biomembranes. 1862, 6, 10 p., 183214.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Treatment with the anti-IgE monoclonal antibody omalizumab in women with asthma undergoing fertility treatment: a proof-of-concept study - The PRO-ART study protocol

    Tidemandsen, C., Juul Gade, E., Ulrik, Charlotte Suppli, Nielsen, Henriette Svarre, Oxlund-Mariegaard, B. S., Kristiansen, Karsten, Freiesleben, Nina la Cour, Nøhr, B., Udengaard, H. & Backer, Vibeke, 2020, In: BMJ Open. 10, 11, 7 p., e037041.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    More is needed — Thousands of loci are required to elucidate the relationships of the ‘flowers of the sea’ (Sabellida, Annelida)

    Tilic, E., Sayyari, E., Stiller, Josefin, Mirarab, S. & Rouse, G. W., 2020, In: Molecular Phylogenetics and Evolution. 9 p., 106892.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Assessment of the Representativeness of MODIS Aerosol Optical Depth Products at Different Temporal Scales Using Global AERONET Measurements

    Tong, Y., Feng, L., Sun, K. & Tang, Jing, 2020, In: Remote Sensing. 12, 14, 26 p., 2330.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Pannexin-1 mediated ATP release in adipocytes is sensitive to glucose and insulin and modulates lipolysis and macrophage migration

    Tozzi, M., Hansen, Jacob B. & Novak, Ivana, 2020, In: Acta Physiologica. 228, 2, 18 p., e13360.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Proton Pump Inhibitors Reduce Pancreatic Adenocarcinoma Progression by Selectively Targeting H+, K+-ATPases in Pancreatic Cancer and Stellate Cells

    Tozzi, M., Sørensen, Christiane Elisabeth, Magni, Lara, Christensen, Nynne, Bouazzi, R., Buch, C. M., Stefanini, M., Duranti, C., Arcangeli, A. & Novak, Ivana, 2020, In: Cancers. 12, 3, 22 p., 640.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Effects of elevated temperature on microbial breakdown of seagrass leaf and tea litter biomass

    Trevathan-Tackett, S. M., Brodersen, Kasper Elgetti & Macreadie, P. I., 2020, In: Biogeochemistry. 151, 2-3, p. 171-185 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Cleaner blues: Condition-dependent colour and cleaner fish service quality

    Trigo, S., Gomes, A. C. R., Cardoso, S. C., Teixeira, M., Cardoso, G. C. & Soares, M. C., 2020, In: Behavioural Processes. 181, 8 p., 104246.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Persistence and progression of staphylococcal infection in the presence of public goods

    Trivedi, Urvish, Fell, C., Madsen, Jonas Stenløkke, Everett, J., Burmølle, Mette, Rumbaugh, K. P. & Sørensen, Søren Johannes, 2020, In: npj Biofilms and Microbiomes. 6, 5 p., 55.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Antibiotic susceptibility of cystic fibrosis lung microbiome members in a multispecies biofilm

    Vandeplassche, E., Sass, A., Ostyn, L., Burmølle, Mette, Kragh, K. N., Bjarnsholt, Thomas, Coenye, T. & Crabbé, A., 2020, In: Biofilm. 2, 9 p., 100031.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The evolution of virulence in Pseudomonas aeruginosa during chronic wound infection

    Vanderwoude, J., Fleming, D., Azimi, S., Trivedi, Urvish, Rumbaugh, K. P. & Diggle, S. P., 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1937, 10 p., 20202272.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Predictability of Leaf Morphological Traits for Paleoecological Reconstruction: The Case of Leaf Cuticle and Leaf Dry Mass per Area

    Veromann-Jürgenson, L., Brodribb, T. J., Laanisto, L., Bruun-Lund, S., Niinemets, Ü., Nuño, S. L., Rinnan, Riikka, Puglielli, G. & Tosens, T., 2020, In: International Journal of Plant Sciences. 181, 1, p. 129-141

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Interaction between non-native predatory fishes and native galaxiids (Pisces: Galaxiidae) shapes food web structure in Tasmanian lakes

    Vidal, N., Trochine, C., Amsinck, S. L., Barmuta, L. A., Christoffersen, Kirsten Seestern, Ventura, M., Buchaca, T., Landkildehus, F., Hardie, S. A., Meerhoff, M. & Jeppesen, E., 2020, In: Inland Waters. 10, 2, p. 212-226

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    The Role of Calmodulin in Tumor Cell Migration, Invasiveness, and Metastasis

    Villalobo, A. & Berchtold, Martin Werner, 2020, In: International Journal of Molecular Sciences (Online). 21, 3, 42 p., 765.

    Research output: Contribution to journal › Review › Research › peer-review

  46. Published

    No Evidence for N7-Methylation of Guanosine (m7G) in Human let-7e

    Vinther, Jeppe, 2020, In: Molecular Cell. 79, 2, p. 199-200 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  47. Published

    Contrasting responses of native and alien plant species to soil properties shed new light on the invasion of dune systems

    Vitti, S., Pellegrini, Elisa, Casolo, V., Trotta, G. & Boscutti, F., 2020, In: Journal of Plant Ecology. 13, 6, p. 667-675

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Substrate switches, phenotypic innovations and allopatric speciation formed taxonomic diversity within the lichen genus Blastenia

    Vondrák, J., Frolov, I., Košnar, J., Arup, U., Veselská, T., Halıcı, G., Malíček, J. & Søchting, Ulrik, 2020, In: Journal of Systematics and Evolution. 58, 3, p. 295-330 36 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Ethanol exposure increases mutation rate through error-prone polymerases

    Voordeckers, K., S.Colding-Christensen, Camilla, Grasso, L., Pardo, B., Hoes, L., Kominek, J., Gielens, K., Dekoster, K., Gordon, J., Van der Zande, E., Bircham, P., Swings, T., Michiels, J., Van Loo, P., Nuyts, S., Pasero, P., Lisby, Michael & Verstrepen, K. J., 2020, In: Nature Communications. 11, 16 p., 3664.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Asexual and sexual reproduction are two separate developmental pathways in a Termitomyces species

    Vreeburg, S. M. E., de Ruijter, N. C. A., Zwaan, B. J., da Costa, R. R., Poulsen, Michael & Aanen, D. K., 2020, In: Biology Letters. 16, 8, 5 p., 20200394.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Ant cuticular hydrocarbons are heritable and associated with variation in colony productivity

    Walsh, J., Pontieri, L., d'Ettorre, P. & Linksvayer, T. A., 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1928, 10 p., 20201029.

    Research output: Contribution to journal › Journal article › Research › peer-review

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