Department of Biology

 

 
  1. 2020
  2. Published

    A high-affinity, bivalent PDZ domain inhibitor complexes PICK1 to alleviate neuropathic pain

    Christensen, N. R., De Luca, M., Lever, M. B., Richner, M., Hansen, A. B., Noes-Holt, G., Jensen, K. L., Rathje, M., Jensen, D. B., Erlendsson, S., Bartling, C. R. O., Ammendrup-Johnsen, I., Pedersen, S. E., Schönauer, M., Nissen, K. B., Midtgaard, S. R., Teilum, K., Arleth, L., Sørensen, A. T., Bach, A. & 5 others, Strømgaard, Kristian, Meehan, Claire Francesca, Vægter, C. B., Gether, Ulrik & Madsen, Kenneth Lindegaard, 2020, In: EMBO Molecular Medicine. 12, 6, 25 p., e11248.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A likelihood method for estimating present-day human contamination in ancient male samples using low-depth X-chromosome data

    Moreno-Mayar, J. V., Korneliussen, Thorfinn Sand, Dalal, J., Renaud, Gabriel, Albrechtsen, Anders, Nielsen, Rasmus & Malaspinas, A., 2020, In: Bioinformatics. 36, 3, p. 828-841 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    A massively parallel platform for engineering leave-one-out split fluorescent proteins

    ANTONESCU, O., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 90 p.

    Research output: Book/ReportPh.D. thesisResearch

  5. Published

    A new molecular phylogeny-based taxonomy of parasitic barnacles (Crustacea: Cirripedia: Rhizocephala)

    Høeg, Jens Thorvald, Noever, C., Rees, D. J., Crandall, K. A. & Glenner, H., 2020, In: Zoological Journal of the Linnean Society. 190, 2, p. 632-653 22 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    A non-lethal method for detection of Bonamia ostreae in flat oyster (Ostrea edulis) using environmental DNA

    Jørgensen, Louise von Gersdorff, Nielsen, J. W., Villadsen, M. K., Vismann, Bent, Dalvin, S., Mathiessen, Heidi, Madsen, L., Kania, Per & Buchmann, Kurt, 2020, In: Scientific Reports. 10, 1, 9 p., 16143.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    A novel method for using RNA-seq data to identify imprinted genes in social Hymenoptera with multiply mated queens

    Howe, Jack, Schiøtt, M., Li, Q., Wang, Z., KU, thw266 & Boomsma, Jacobus J., 2020, In: Journal of Evolutionary Biology. 33, 12, p. 1770-1782 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    AgNO3 sterilizes grains of barley (Hordeum vulgare) without inhibiting germination - a necessary tool for plant–microbiome research

    Munkager, V., Vestergård, M., Priemé, Anders, Altenburger, A., de Visser, E., Johansen, Jesper Liengaard & Ekelund, Flemming, 2020, In: Plants. 9, 3, 16 p., 372.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Amoebocytes facilitate efficient carbon and nitrogen assimilation in the Cassiopea-Symbiodiniaceae symbiosis

    Lyndby, N. H., Rädecker, N., Bessette, S., Søgaard Jensen, L. H., Escrig, S., Trampe, Erik, Kühl, Michael & Meibom, A., 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1941, 10 p., 20202393.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    An Expert Analysis System for Metabolomics Data Analysis

    Mei, Z., 2020, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  11. Published

    An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species

    Zhang, P., Zhao, Y., Li, C., Lin, M., Dong, L., Zhang, R., Liu, M., Li, K., Zhang, H., Liu, X., Zhang, Y., Yuan, Y., Liu, H., Seim, I., Sun, S., Du, X., Chang, Y., Li, F., Liu, S., Lee, S. M. Y. & 13 others, Wang, K., Wang, D., Wang, X., McGowen, M. R., Jefferson, T. A., Olsen, Morten Tange, Stiller, Josefin, KU, thw266, Xu, X., Yang, H., Fan, G., Liu, X. & Li, S., 2020, In: iScience. 23, 10, 52 p., 101640.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    An RNAi independent antiviral activity of the Arabidopsis thaliana DCL2

    Nielsen, C. P. S., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 104 p.

    Research output: Book/ReportPh.D. thesisResearch

  13. Published

    An atlas of the protein-coding genes in the human, pig, and mouse brain

    Sjöstedt, E., Zhong, W., Fagerberg, L., Karlsson, M., Mitsios, N., Adori, C., Oksvold, P., Edfors, F., Limiszewska, A., Hikmet, F., Huang, J., Du, Y., Lin, L., Dong, Z., Yang, L., Liu, X., Jiang, H., Xu, X., Wang, J., Yang, H. & 10 others, Bolund, L., Mardinoglu, A., Zhang, C., von Feilitzen, K., Lindskog, C., Pontén, F., Luo, Y., Hökfelt, T., Uhlén, M. & Mulder, J., 2020, In: Science. 367, 6482, p. 1090-+ 16 p., eaay5947.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Analogues of a Cyclic Antimicrobial Peptide with a Flexible Linker Show Promising Activity Against Pseudomonas aeruginosa and Staphylococcus aureus

    Thomsen, T. T., Mendel, H. C., Al-Mansour, W., Oddo, A., Løbner-Olesen, Anders & Hansen, Paul Robert, 2020, In: Antibiotics. 9, 7, 13 p., 366.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Analysis of caveolin in primary cilia

    Morthorst, Stine Kjær, Mogensen, J. B., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2020, Caveolae: Methods and Protocols. Blouin, C. M. (ed.). Humana Press, p. 27-41 (Methods in Molecular Biology, Vol. 2169).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearch

  16. Published

    Analysis of genes within the schizophrenia-linked 22q11.2 deletion identifies interaction of night owl/LZTR1 and NF1 in GABAergic sleep control

    Maurer, G. W., Malita, Alina, Nagy, S., Koyama, Takashi, Werge, Thomas, Halberg, Kenneth Veland, Texada, Michael James & Rewitz, Kim, 2020, In: PLOS Genetics. 16, 4, 31 p., e1008727.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Anchialine biodiversity in the Turks and Caicos islands: new discoveries and current faunal composition

    Gonzalez, B. C., Martínez, A., Olesen, Jørgen, Truskey, S. B., Ballou, L., Allentoft-Larsen, M., Daniels, J., Heinerth, P., Parrish, M., Manco, N., Ward, J., Iliffe, T. M., Osborn, K. J. & Worsaae, Katrine, 2020, In: International Journal of Speleology. 49, 2, p. 71-86 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Ancient Genomes Reveal the Evolutionary History and Origin of Cashmere-Producing Goats in China

    Cai, Y., Fu, W., Cai, D., Heller, R., Zheng, Z., Wen, J., Li, H., Wang, X., Alshawi, A., Sun, Z., Zhu, S., Wang, J., Yang, M., Hu, S., Li, Y., Yang, Z., Gong, M., Hou, Y., Lan, T., Wu, K. & 3 others, Chen, Y., Jiang, Y. & Wang, X., 2020, In: Molecular Biology and Evolution. 37, 7, p. 2099-2109 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Annelida (excluding Clitellata and Oligochaeta)

    Worsaae, Katrine, 2020, Guide to the Identification of Marine Meiofauna. Schmidt-Rhaesa, A. (ed.). Verlag Dr. Friedrich Pfeil, p. 239-270

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  20. Published

    Ant cuticular hydrocarbons are heritable and associated with variation in colony productivity

    Walsh, J., Pontieri, L., d'Ettorre, P. & Linksvayer, T. A., 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1928, 10 p., 20201029.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Anthropogenic transformation of Yangtze Plain freshwater lakes: patterns, drivers and impacts

    Hou, X., Feng, L., Tang, Jing, Song, X., Liu, J., Zhang, Y., Wang, J., Xu, Y., Dai, Y., Zheng, Y., Zheng, C. & Bryan, B. A., 2020, In: Remote Sensing of Environment. 248, 14 p., 111998.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Anti-CRISPR Proteins in Archaea

    Peng, Xu, Mayo-Muñoz, D., Bhoobalan, Yuvaraj & Martinez Alvarez, Laura, 2020, In: Trends in Microbiology. 28, 11, p. 913-921 9 p.

    Research output: Contribution to journalReviewResearchpeer-review

  23. Published

    Anti-CRISPR protein applications: natural brakes for CRISPR-Cas technologies

    Marino, N. D., Pinilla Redondo, Rafael, Csörgő, B. & Bondy-Denomy, J., 2020, In: Nature Methods. 17, 5, p. 471-479 9 p.

    Research output: Contribution to journalReviewResearchpeer-review

  24. Published

    Anti-sea lice agents in Norwegian aquaculture: surveillance, treatment trends and possible implications for food safety

    Hannisdal, R., Nøstbakken, O. J., Hove, H., Madsen, L., Horsberg, T. E. & Lunestad, B. T., 2020, In: Aquaculture. 521, 7 p., 735044.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Antibiotic susceptibility of cystic fibrosis lung microbiome members in a multispecies biofilm

    Vandeplassche, E., Sass, A., Ostyn, L., Burmølle, Mette, Kragh, K. N., Bjarnsholt, Thomas, Coenye, T. & Crabbé, A., 2020, In: Biofilm. 2, 9 p., 100031.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Antimicrobial and Antivirulence Action of Eugenia brejoensis Essential Oil in vitro and in vivo Invertebrate Models

    Filho, C. M. B., da Silva, L. C. N., da Silva, M. V., Løbner-Olesen, Anders, Struve, C., Krogfelt, K. A., Correia, M. T. D. S. & Oliva, M. L. V., 2020, In: Frontiers in Microbiology. 11, 11 p., 424.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Aquatic plants are influenced by the surrounding landscape

    Pedersen, Ole, 2020, In: TheScienceBreaker. 6, 3

    Research output: Contribution to journalLetterResearch

  28. Published

    Archaeal Viruses and Their Interactions with CRISPR-Cas Systems

    Garrett, Roger Antony, Shah, S. A., Martinez Alvarez, Laura & Peng, Xu, 2020, Biocommunication of Phages. 1 ed. Springer, p. 199-220 22 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  29. Published

    Arctic soil carbon turnover controlled by experimental snow addition, summer warming and shrub removal

    Ravn, N. R., Elberling, Bo & Michelsen, Anders, 2020, In: Soil Biology and Biochemistry. 142, 12 p., 107698.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Arctic soil water chemistry in dry and wet tundra subject to snow addition, summer warming and herbivory simulation

    Rasmussen, Laura Helene, Michelsen, Anders, Ladegaard-Pedersen, P., Nielsen, C. S. & Elberling, Bo, 2020, In: Soil Biology and Biochemistry. 141, 13 p., 107676.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Asexual and sexual reproduction are two separate developmental pathways in a Termitomyces species

    Vreeburg, S. M. E., de Ruijter, N. C. A., Zwaan, B. J., da Costa, R. R., Poulsen, Michael & Aanen, D. K., 2020, In: Biology Letters. 16, 8, 5 p., 20200394.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Assessing the reproductive biology of the Greenland shark (Somniosus microcephalus)

    Nielsen, J., Hedeholm, R. B., Lynghammar, A., McClusky, L. M., Berland, B., Steffensen, John Fleng & Christiansen, J. S., 2020, In: PLoS ONE. 15, 10, 22 p., e0238986.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Assessment of fecal DNA extraction protocols for metagenomic studies

    Yang, F., Sun, J., Luo, H., Ren, H., Zhou, H., Lin, Y., Han, Mo, Chen, B., Liao, H., Brix, S., Li, J., Yang, H., Kristiansen, Karsten & Zhong, H., 2020, In: GigaScience. 9, 7, 12 p., giaa071.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Assessment of the Representativeness of MODIS Aerosol Optical Depth Products at Different Temporal Scales Using Global AERONET Measurements

    Tong, Y., Feng, L., Sun, K. & Tang, Jing, 2020, In: Remote Sensing. 12, 14, 26 p., 2330.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    August Krogh (1874-1949): Nobelprisen i "Fysiologi eller Medicin" 1920

    Larsen, Erik Hviid, 2020, Københavns Universitets Almanak: Skriv- og rejse-kalender. 2 ed. p. 88-95 8 p. (Københavns Universitets almanak. Skriv- og rejse-kalender).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterCommunication

  36. Published

    Autophagy mediate cellular reprogramming

    Chevalier, J. R., 2020, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  37. Published

    Autophagy mediates temporary reprogramming and dedifferentiation in plant somatic cells

    Rodriguez, Eleazar, Chevalier, J., Olsen, J., Ansbøl, J., Kapousidou, V., Zuo, Zhangli Thomsen, Svenning, S., Loefke, C., Koemeda, S., Drozdowskyj, P. S., Jez, J., Durnberger, G., Kuenzl, F., Schutzbier, M., Mechtler, K., Ebstrup, E. N., Lolle, S., Dagdas, Y. & Petersen, Morten, 2020, In: EMBO Journal. 39, 4, 11 p., e103315.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Avidity within the N-terminal anchor drives α-synuclein membrane interaction and insertion

    Cholak, E., Bugge, K., Khondker, A., Gauger, K., Pedraz-Cuesta, E., Pedersen, M. E., Bucciarelli, S., Vestergaard, Bente, Pedersen, Stine Helene Falsig, Rheinstädter, M. C., Langkilde, Annette Eva & Kragelund, Birthe Brandt, 2020, In: FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 34, 6, p. 7462-7482 21 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Azo dying of α-keratin material improves microbial keratinase screening and standardization

    Gonzalo, M., Espersen, R., Al-Soud, W. A., Cristiano Falco, F., Hägglund, Per Mårten, Sørensen, Søren Johannes, Svensson, B. & Jacquiod, S., 2020, In: Microbial Biotechnology. 13, 4, p. 984-996

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Background insect herbivory increases with local elevation but makes minor contribution to element cycling along natural gradients in the Subarctic

    Kristensen, J. A., Michelsen, Anders & Metcalfe, D. B., 2020, In: Ecology and Evolution. 10, 20, p. 11684-11698 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Bacterial Chromosome Replication and DNA Repair During the Stringent Response

    Sinha, A. K., Løbner-Olesen, Anders & Riber, Leise, 2020, In: Frontiers in Microbiology. 11, 9 p., 582113.

    Research output: Contribution to journalReviewResearchpeer-review

  42. Published

    Bacteriophages: Emerging Applications in Medicine, Food, and Biotechnology

    Sohail, H. A., Coffey, A., Debrowska, K., Meyer, I. M., Middelboe, Mathias, Sohail, M. & Clokie, M. R. J., 2020, In: PHAGE: Therapy, Applications, and Research. 1, 2, p. 75-82 8 p.

    Research output: Contribution to journalConference articleResearchpeer-review

  43. Published

    Bacteriophages as Biocontrol Agents for Flavobacterium psychrophilum Biofilms and Rainbow Trout Infections

    Sundell, K., Landor, L., Castillo, D., Middelboe, Mathias & Wiklund, T., 2020, In: PHAGE: Therapy, Applications, and Research. 1, 4, p. 198-204 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Beta-1 and Not Beta-3 Adrenergic Receptors May Be the Primary Regulator of Human Brown Adipocyte Metabolism

    Riis-Vestergaard, M. J., Richelsen, B., Bruun, J. M., Li, W., Hansen, Jacob B. & Pedersen, S. B., 2020, In: The Journal of clinical endocrinology and metabolism. 105, 4, 12 p., dgz298.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Beyond Cholera: Characterization of zot-Encoding Filamentous Phages in the Marine Fish Pathogen Vibrio anguillarum

    Mauritzen, Jesper Juel, Castillo, D., Tan, D., Svenningsen, Sine Lo & Middelboe, Mathias, 2020, In: Viruses. 12, 7, 17 p., 730.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Bezlotoxumab for prevention of Clostridium difficile infection recurrence: Distinguishing relapse from reinfection with whole genome sequencing

    Zeng, Z., Zhao, Hailong, Dorr, M. B., Shen, J., Wilcox, M. H., Poxton, I. R., Guris, D., Li, J. & Shaw, P. M., 2020, In: Anaerobe. 61, 6 p., 102137.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Bidirectional cyclical flows increase energetic costs of station holding for a labriform swimming fish, Cymatogaster aggregata

    Luongo, S. M., Ruth, A., Gervais, C. R., Korsmeyer, K. E., Johansen, J. L., Domenici, P. & Steffensen, John Fleng, 2020, In: Conservation Physiology. 8, 1, 11 p., coaa077.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Bier

    Madsen, Henning Bang, 2020, Den danske Rødliste. Moeslund, J. E. (ed.). Aarhus Universitet, DCE – Nationalt Center for Miljø og Energi

    Research output: Chapter in Book/Report/Conference proceedingReport chapterResearchpeer-review

  49. Published

    Biocontrol of Bacterial Wilt Disease Through Complex Interaction Between Tomato Plant, Antagonists, the Indigenous Rhizosphere Microbiota, and Ralstonia solanacearum

    Elsayed, T. R., Jacquiod, S., Nour, E. H., Sørensen, Søren Johannes & Smalla, K., 2020, In: Frontiers in Microbiology. 10, 15 p., 2835.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Biogenic Volatile Organic Compounds in Arctic Soil: A Field Study of Concentrations and Variability With Vegetation Cover

    Larsen, Lærke Wester, Kramshøj, M., Albers, C. N. & Rinnan, Riikka, 2020, In: Journal of Geophysical Research: Biogeosciences. 125, 7, 15 p., e2019JG005551.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Bionic 3D printed corals

    Wangpraseurt, D., You, S., Azam, F., Jacucci, G., Gaidarenko, O., Hildebrand, M., Kühl, Michael, Smith, A. G., Davey, M. P., Smith, A., Deheyn, D. D., Chen, S. & Vignolini, S., 2020, In: Nature Communications. 11, 8 p., 1748.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Biophysical characterization and industrial-scale production of Aquaporins: Human aquaporins in relation to lifestyle disease and identification of putative aquaporins for improved water filtration

    Krabbe, S. L., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 216 p.

    Research output: Book/ReportPh.D. thesisResearch

  53. Published

    Body fluid from the parasitic worm Ascaris suum inhibits broad-acting pro-inflammatory programs in dendritic cells

    Arora, P., Moll, J. M., Andersen, D., Workman, C. T., Williams, Andrew Richard, Kristiansen, Karsten & Brix, S., 2020, In: Immunology. 159, 3, p. 322-334

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Broad-spectrum anti-CRISPR proteins facilitate horizontal gene transfer

    Mahendra, C., Christie, K. A., Osuna, B. A., Pinilla Redondo, Rafael, Kleinstiver, B. P. & Bondy-Denomy, J., 2020, In: Nature Microbiology. 5, 4, p. 620-629 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    Byerne som hjemsted for bier

    Hansted, L., Dupont, Y. L., Rasmussen, C. & Madsen, Henning Bang, 2020, In: Nyt Fokus. 15, p. 16-19

    Research output: Contribution to journalJournal articleCommunication

  56. Published

    CAncer bioMarker Prediction Pipeline (CAMPP) - A standardized framework for the analysis of quantitative biological data

    Terkelsen, T., Krogh, Anders & Papaleo, E., 2020, In: PLOS Computational Biology. 16, 3, 20 p., e1007665.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    CRISPR/Cas9 muterede zebrafisk på Frederiksberg Campus

    Jørgensen, Louise von Gersdorff, Marana, Moonika Haahr & Limborg, Morten Tønsberg, 2020

    Research output: Other contributionNet publication - Internet publicationResearch

  58. Published

    CRISPRCasTyper: Automated Identification, Annotation, and Classification of CRISPR-Cas Loci

    Russel, J., Pinilla Redondo, Rafael, Mayo-Muñoz, D., Shah, S. A. & Sørensen, Søren Johannes, 2020, In: CRISPR Journal. 3, 6, p. 462-469 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    Cancer Cell Acid Adaptation Gene Expression Response is Correlated to Tumor-Specific Tissue Expression Profiles and Patient Survival

    Yao, Jiayi, Czaplinska, D., Ialchina, Renata, Schnipper, J., Liu, B., Sandelin, Albin Gustav & Pedersen, Stine Helene Falsig, 2020, In: Cancers. 12, 8, 27 p., 2183.

    Research output: Contribution to journalJournal articleResearchpeer-review

  60. Published

    Carbon Dioxide Partial Pressure and Emission Throughout the Scandinavian Stream Network

    Martinsen, K. T., Kragh, T. & Sand-Jensen, Kaj, 2020, In: Global Biogeochemical Cycles. 34, 12, 14 p., e2020GB006703.

    Research output: Contribution to journalJournal articleResearchpeer-review

  61. Published

    Carbon dioxide efflux and ecosystem metabolism of small forest lakes

    Martinsen, K. T., Kragh, T. & Sand-Jensen, Kaj, 2020, In: Aquatic Sciences. 82, 17 p., 9.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Caveats on the use of rotenone to estimate mixotrophic grazing in the oceans

    Ferreira, G. D. & Calbet, A., 2020, In: Scientific Reports. 10, 11 p., 3899.

    Research output: Contribution to journalJournal articleResearchpeer-review

  63. Published

    Changes induced by heavy metals in the plant-associated microbiome of Miscanthus x giganteus

    Zadel, U., Nesme, Joseph, Michalke, B., Vestergaard, G., Płaza, G. A., Schröder, P., Radl, V. & Schloter, M., 2020, In: Science of the Total Environment. 711, 10 p., 134433.

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. Published

    Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways

    Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  65. Published

    Characterization of a lipid-producing thermotolerant marine photosynthetic pico-alga in the genus Picochlorum (Trebouxiophyceae)

    Mucko, M., Padisák, J., Gligora Udovic, M., Pálmai, T., Novak, T., Medic, Nikola, Gasparovic, B., Peharec Stefanic, P., Orlic, S. & Ljubesic, Z., 2020, In: European Journal of Phycology. 55, 4, p. 384-399 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Published

    Characterization of a novel type III CRISPR-Cas effector provides new insights into the allosteric activation and suppression of the Cas10 DNase

    Lin, Jinzhong, Feng, M., Zhang, H. & She, Q., 2020, In: Cell Discovery. 6, 16 p., 29.

    Research output: Contribution to journalJournal articleResearchpeer-review

  67. Published

    Chemical composition and antioxidant activity of Geranium macrorrhizum in relation to ploidy level and environmental conditions

    Cavar Zeljkovic, S., Siljak-Yakovlev, S., Tan, K. & Maksimovic, M., 2020, In: Plant Systematics and Evolution. 306, 2, 12 p., 18.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Published

    Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain

    Wang, M., Liu, Y., Wen, T., Liu, W., Gao, Q., Zhao, J., Xiong, Z., Wang, Z., Jiang, W., Yu, Y., Wu, L., Yuan, Y., Wei, X., Xu, J., Cheng, M., Zhang, P., Li, P., Hou, Y., Yang, H., Zhang, G. & 3 others, Li, Q., Liu, C. & Liu, L., 2020, In: Scientific Data. 7, 10 p., 217.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    Circle-Seq: Isolation and Sequencing of Chromosome-Derived Circular DNA Elements in Cells

    Møller, H. D., 2020, DNA Electrophoresis: Methods and Protocols. Hanada, K. (ed.). Humana Press, p. 165-181 17 p. (Methods in Molecular Biology, Vol. 2119).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  70. Published

    Classifying disease-associated variants using measures of protein activity and stability

    Jepsen, M. M., Fowler, D. M., Hartmann-Petersen, Rasmus, Stein, Amelie & Lindorff-Larsen, Kresten, 2020, Protein Homeostasis Diseases: Mechanisms and Novel Therapies. Pey, A. L. (ed.). Elsevier, p. 91-107

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  71. Published

    Cleaner blues: Condition-dependent colour and cleaner fish service quality

    Trigo, S., Gomes, A. C. R., Cardoso, S. C., Teixeira, M., Cardoso, G. C. & Soares, M. C., 2020, In: Behavioural Processes. 181, 8 p., 104246.

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Published

    Climate and land use change effects on soil erosion in two small agricultural catchment systems Fugnitz - Austria, Can Revull - Spain

    Lützenburg, Gregor, Bittner, Meriel Jennifer, Calsamiglia, A., Renschler, C. S., Estrany, J. & Poeppl, R., 2020, In: Science of the Total Environment. 704, 135389.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. Published

    Clinical characteristics of the BREATHE cohort: a real-life study on patients with asthma and COPD

    Backer, V., Klein, D. K., Bodtger, U., Romberg, K., Porsbjerg, C., Erjefält, J. S., Kristiansen, K., Xu, R., Silberbrandt, A., Frøssing, L., Hvidtfeldt, M., Obling, N., Jarenbäck, L., Nasr, A., Tufvesson, E., Mori, M., Winther-Jensen, M., Karlsson, L., Nihlén, U., Flintegaard, T. V. & 1 others, Bjermer, L., 2020, In: European Clinical Respiratory Journal. 7, 1, 11 p., 1736934.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    Cloacal swabs and alcohol bird specimens are good proxies for compositional analyses of gut microbial communities of Great tits (Parus major)

    Bodawatta, Kasun Harshana, Puzejova, K., Sam, K., Poulsen, Michael & Jønsson, Knud Andreas, 2020, In: BMC Animal Microbiome. 2, 13 p., 9.

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Published

    Closely related dinoflagellate species in vastly different habitats – an example of a marine–freshwater transition

    Annenkova, N. V., Hansen, Gert & Rengefors, K., 2020, In: European Journal of Phycology. 55, 4, p. 478-489 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Co-Chaperones in Targeting and Delivery of Misfolded Proteins to the 26S Proteasome

    Abildgaard, A. B., Gersing, S. K., Larsen-Ledet, Sven, Nielsen, S. V., Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2020, In: Biomolecules. 10, 8, 24 p., 1141.

    Research output: Contribution to journalReviewResearchpeer-review

  77. Published

    Colchicine treatment impairs skeletal muscle mitochondrial function and insulin sensitivity in an age-specific manner

    Buch, B. T., Halling, Jens Frey, Jørgensen, Stine Ringholm, Gudiksen, Anders, Kjøbsted, Rasmus, Olsen, M. A., Wojtaszewski, Jørgen F P & Pilegaard, Henriette, 2020, In: F A S E B Journal. 34, 6, p. 8653-8670

    Research output: Contribution to journalJournal articleResearchpeer-review

  78. Published

    Combining molecular dynamics simulations with small-angle X-ray and neutron scattering data to study multi-domain proteins in solution

    Nørgrd Larsen, Andreas, Wang, Y., Bottaro, S., Grudinin, S., Arleth, Lise & Lindorff-Larsen, Kresten, 2020, In: P L o S Computational Biology. 16, 4, 29 p., e1007870.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. Published

    Community curation of bioinformatics software and data resources

    Ison, J., Ménager, H., Brancotte, B., Jaaniso, E., Salumets, A., Raček, T., Lamprecht, A. L., Palmblad, M., Kalaš, M., Chmura, Piotr Jaroslaw, Hancock, J. M., Schwämmle, V. & Ienasescu, H. I., 2020, In: Briefings in Bioinformatics. 21, 5, p. 1697-1705 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  80. Published

    Community-intrinsic properties enhance keratin degradation from bacterial consortia

    Nasipuri, P., Herschend, J., Brejnrod, A. D., Madsen, Jonas Stenløkke, Espersen, R., Svensson, B., Burmølle, Mette, Jacquiod, S. & Sørensen, Søren Johannes, 2020, In: PLoS ONE. 15, 1, 26 p., e0228108.

    Research output: Contribution to journalJournal articleResearchpeer-review

  81. Published

    Comparative Analysis of Sample Extraction and Library Construction for Shotgun Metagenomics

    Peng, Z., Zhu, X., Wang, Z., Yan, X., Wang, G., Tang, M., Jiang, A. & Kristiansen, Karsten, 2020, In: Bioinformatics and Biology Insights. 14, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    Comparative Proteomics and Secretomics Revealed Virulence and Antibiotic Resistance-Associated Factors in Vibrio parahaemolyticus Recovered From Commonly Consumed Aquatic Products

    Zhu, Z., Yang, L., Yu, P., Wang, Y., Peng, Xu & Chen, L., 2020, In: Frontiers in Microbiology. 11, 31 p., 1453.

    Research output: Contribution to journalJournal articleResearchpeer-review

  83. Published

    Comparative Studies of NGS Assays and Sequencing Technologies

    Peng, Z., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 114 p.

    Research output: Book/ReportPh.D. thesisResearch

  84. Published

    Comparative home range size and habitat selection in provisioned and non-provisioned long-tailed macaques (Macaca fascicularis) in Baluran National Park, East Java, Indonesia

    Hansen, Malene Friis, Ellegaard, S., Moeller, M. M., van Beest, F. M., Fuentes, A., Nawangsari, V. A., Groendahl, C., Frederiksen, M. L., Stelvig, M., Schmidt, N. M., Traeholt, C. & Dabelsteen, Torben, 2020, In: Contributions to Zoology. 89, 4, p. 393-411 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. Published

    Comparative transcriptome studies reveal mitochondrial role in lung cancer classification and mechanism in cancer-resistant species: Transcriptomics studies on cancer-resistant species

    Zhao, J., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 130 p.

    Research output: Book/ReportPh.D. thesisResearch

  86. Published

    Comparative transcriptomic analyses of chlorogenic acid and luteolosides biosynthesis pathways at different flowering stages of diploid and tetraploid Lonicera japonica

    Wang, H., Li, Y., Wang, S., Kong, D., Sahu, S. K., Bai, M., Li, H., Li, L., Xu, Y., Liang, H., Liu, Huan & Wu, H., 2020, In: PeerJ. 8, 24 p., e8690.

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Comparative transcriptomics of primary cells in vertebrates

    Alam, T., Agrawal, S., Severin, J., Young, R. S., Andersson, R., Arner, E., Hasegawa, A., Lizio, M., Ramilowski, J. A., Abugessaisa, I., Ishizu, Y., Noma, S., Tarui, H., Taylor, M. S., Lassmann, T., Itoh, M., Kasukawa, T., Kawaji, H., Marchionni, L., Sheng, G. & 5 others, Forrest, A. R. R., Khachigian, L. M., Hayashizaki, Y., Carninci, P. & de Hoon, M. J. L., 2020, In: Genome Research. 30, 7, p. 951-961 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. Published

    Comparison of antibiotic-resistant bacteria and antibiotic resistance genes abundance in hospital and community wastewater: A systematic review

    Hassoun-Kheir, N., Stabholz, Y., Kreft, J., de la Cruz, R., Romalde, J. L., Nesme, Joseph, Sørensen, Søren Johannes, Smets, B. F., Graham, D. & Paul, M., 2020, In: Science of the Total Environment. 743, 11 p., 140804.

    Research output: Contribution to journalReviewResearchpeer-review

  89. Published

    Compatibility of X-ray computed tomography with plant gene expression, rhizosphere bacterial communities and enzyme activities

    Ganther, M., Yim, B., Ibrahim, Z., Bienert, M. D., Lippold, E., Maccario, Lorrie, Sørensen, Søren Johannes, Bienert, G. P., Vetterlein, D., Heintz-Buschart, A., Blagodatskaya, E., Smalla, K. & Tarkka, M. T., 2020, In: Journal of Experimental Botany. 71, 18, p. 5603-5614 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. Published

    Competitive mapping allows for the identification and exclusion of human DNA contamination in ancient faunal genomic datasets

    Feuerborn, Tatiana Richtman, Palkopoulou, E., van der Valk, T., von Seth, J., Munters, A. R., Chrzanová Pecnerová, Patrícia, Dehasque, M., Ureña, I., Ersmark, E., Lagerholm, V. K., Krzewinska, M., Rodríguez-Varela, R., Götherström, A., Dalén, L. & Díez-del-Molino, D., 2020, In: BMC Genomics. 21, 10 p., 844.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    Composted sewage sludge influences the microbiome and persistence of human pathogens in soil

    Major, N., Schierstaedt, J., Jechalke, S., Nesme, Joseph, Ban, S. G., Černe, M., Sørensen, Søren Johannes, Ban, D. & Schikora, A., 2020, In: Microorganisms. 8, 7, 14 p., 1020.

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. Published

    Computing, Analyzing, and Comparing the Radius of Gyration and Hydrodynamic Radius in Conformational Ensembles of Intrinsically Disordered Proteins

    Ahmed, M. C., Crehuet, R. & Lindorff-Larsen, Kresten, 2020, Intrinsically Disordered Proteins: Methods and Protocols. Kragelund, B. B. & Skriver, K. (eds.). Humana Press, p. 429-445 17 p. (Methods in Molecular Biology, Vol. 2141).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  93. Published

    Concerted action of kinesins KIF5B and KIF13B promotes efficient secretory vesicle transport to microtubule plus ends

    Serra-Marques, A., Martin, M., Katrukha, E. A., Grigoriev, I., Peeters, C. A. E., Liu, Q., Hooikaas, P. J., Yao, Y., Solianova, V., Smal, I., Pedersen, Lotte Bang, Meijering, E., Kaitein, L. C. & Akhmanova, A., 2020, In: eLife. 9, 37 p., e61302.

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. Published

    Conformational heterogeneity of Savinase from NMR, HDX-MS and X-ray diffraction analysis

    Wu, S., Nguyen, T. T. T. N., Moroz, O. V., Turkenburg, J. P., Nielsen, J. E., Wilson, K. S., Rand, Kasper Dyrberg & Teilum, Kaare, 2020, In: PeerJ. 8, 17 p., e9408.

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. Published

    Construction of Simplified Microbial Consortia to Degrade Recalcitrant Materials Based on Enrichment and Dilution-to-Extinction Cultures

    Kang, D., Jacquiod, S., Herschend, J., Wei, S., Nesme, Joseph & Sørensen, Søren Johannes, 2020, In: Frontiers in Microbiology. 10, 10 p., 3010.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. Published

    Context Matters in Disorder Based Protein Communication

    Kragelund, Birthe Brandt, Prestel, Andreas, Wickmann, N., Martins, J., Boomsma, Wouter, Staby, L., Hendus-Altenburger, R. & Skriver, Karen, 2020, In: Biophysical Journal. 118, 3, suppl. 1, p. 491A 2407-Plat.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  97. Published

    Contrasting neurochemical and behavioral profiles reflects stress coping styles but not stress responsiveness in farmed gilthead seabream (Sparus aurata)

    Höglund, E., Moltesen, M., Castanheira, M. F., Thörnqvist, P., Silva, P. I. M., Øverli, Ø., Martins, C. & Winberg, S., 2020, In: Physiology and Behavior. 214, 8 p., 112759.

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Published

    Contrasting responses of native and alien plant species to soil properties shed new light on the invasion of dune systems

    Vitti, S., Pellegrini, Elisa, Casolo, V., Trotta, G. & Boscutti, F., 2020, In: Journal of Plant Ecology. 13, 6, p. 667-675

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    Coral reef survival under accelerating ocean deoxygenation

    Hughes, D. J., Alderdice, R., Cooney, C., Kühl, Michael, Pernice, M., Voolstra, C. R. & Sugget, D. J., 2020, In: Nature Climate Change. 10, 4, p. 296–307

    Research output: Contribution to journalJournal articleResearchpeer-review

  100. Published

    Counting Replication Origins to Measure Growth of Pathogens

    Charbon, Godefroid, Haugan, M. S., Frimodt-Møller, N. & Løbner-Olesen, Anders, 2020, In: Antibiotics. 9, 5, 5 p., 239.

    Research output: Contribution to journalJournal articleResearchpeer-review

  101. Published

    Curses or Cures: A Review of the Numerous Benefits Versus the Biosecurity Concerns of Conotoxin Research

    Bjørn-Yoshimoto, Walden, Ramiro, Iris Bea L. , Yandell, M., McIntosh, J. M., Olivera, B. M., Ellgaard, Lars & Safavi, Helena, 2020, In: Biomedicines. 8, 8, 22 p., 235.

    Research output: Contribution to journalReviewResearchpeer-review