Department of Biology

 

 
  1. Published

    Genetic variation in coexisting sexual diploid and parthenogenetic triploid forms of Fridericia galba (Enchytraeidae, Oligochaeta) in a heterogenous environment

    Christensen, B., Hvilsom, M. & Pedersen, B. V., 1992, In: Yichuan. 117, p. 153-162

    Research output: Contribution to journalJournal articleResearch

  2. Published

    Asexual Propagation and Reproductive Strategies in Annelida - Clitellata

    Christensen, B., 1994, In: Reproductive Biology of Invertebrates, Vol VI, Part B. Asexual propagation and s. K.G. Adiyodi and R.G. Adiyodi (eds), p. 1-23

    Research output: Contribution to journalJournal articleResearch

  3. Published

    Clonal dispersal in sexual/asexual Buchholzia appendiculata (Enchytraeidae, Oligochaeta) as revealed by genetic markers

    Christensen, B., Pedersen, B. V. & Hvilsom, M. M., 2002, In: Natura Jutlandica. Occasional Papers. 2, p. 94-95

    Research output: Contribution to journalJournal articleResearch

  4. Published

    Biologiundervisningen under forandring

    Christensen, B., 1995, In: Flora og Fauna. 100. årg., 3 + 4 hæfte, p. 89-93

    Research output: Contribution to journalJournal articleResearch

  5. Published

    A new genus Globulidrilus and three new enchytraeid species (Oligochaeta: Enchytraeidae) from Seoraksan National Park (Korea)

    Christensen, B. & Dózsa-Farkas, K., 2012, In: Journal of Natural History. 46, 45-46, p. 2769-2785 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Peter Nansen

    Christensen, B., 2002

    Research output: Book/ReportBookResearch

  7. Published

    Invasion of terrestrial enchytraeids into two postglacial tundras: North-eastern Greenland and the Arctic Archipelago of Canada (Enchytraeidae, Oligochaeta)

    Christensen, B. & Dózsa-Farkas, K., 2006, In: Polar Biology. 29, 6, p. 454-466

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Toxicity of pesticides to Enchytraeus bigeminus

    Christensen, B. & Jensen, L. O., 1995, In: Bekaempelsesmiddelforskning fra Miljoestyrelsen. Nr 8, p. 33-38

    Research output: Contribution to journalJournal articleResearch

  9. Published

    Dyrenes udvikling - fra flagellat til menneske.

    Christensen, B., Pedersen, B. V. & Theisen, B. F., 1997, København: Gad.

    Research output: Book/ReportBookResearch

  10. Published

    Phylogenetic status of the family Naididae (Obligochaeta, Annelida) as inferred from DNA analyses

    Christensen, B. & Theisen, B. F., 1998, In: J. Zool. Syst. Evol. Research. 36, p. 169S172

    Research output: Contribution to journalJournal articleResearch

  11. Published

    Økologiens mester

    Christensen, B., 2000, In: Dansk Naturhistorisk Tidsskrift. Årsskrift nr. 10, p. 73-76

    Research output: Contribution to journalJournal articleResearch

  12. Published

    Protein structure validation and refinement using amide proton chemical shifts derived from quantum mechanics

    Christensen, A. S., Linnet, T. E., Borg, M., Boomsma, Wouter, Lindorff-Larsen, Kresten, Hamelryck, Thomas Wim & Jensen, Jan Halborg, 2013, In: PLoS ONE. 8, 12, 10 p., e84123.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    FragBuilder: an efficient Python library to setup quantum chemistry calculations on peptides models

    Christensen, A. S., Hamelryck, Thomas Wim & Jensen, Jan Halborg, 2014, In: PeerJ. 2, e277.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Feeding-induced changes in allatostatin-A and short neuropeptide F in the antennal lobes affect odor-mediated host seeking in the yellow fever mosquito, Aedes aegypti

    Christ, P., Reifenrath, A., Kahnt, J., Hauser, Frank, Hill, S. R., Schachtner, J. & Ignell, R., 22 Nov 2017, In: PLoS ONE. 12, 11, 15 p., e0188243.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Functional characterization of the dual allatostatin-A receptors in mosquitoes

    Christ, P., Hill, S. R., Schachtner, J., Hauser, Frank & Ignell, R., 2018, In: Peptides. 99, p. 44-55 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Functional characterization of mosquito short neuropeptide F receptors

    Christ, P., Hill, S. R., Schachtner, J., Hauser, Frank & Ignell, R., 2018, In: Peptides. 103, p. 31-39 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Downstream events of neurogenin 3 in pancreatic endocrine differentiation

    Christ, L. C. R., 2009, Biologisk Institut: Museum Tusculanum. 94 p.

    Research output: Book/ReportPh.D. thesisResearch

  18. Published

    Conformational rigidity and protein dynamics at distinct timescales regulate PTP1B activity and allostery

    Choy, M. S., Li, Y., Machado, L. E. S. F., Kunze, M. B. A., Connors, C. R., Wei, X., Lindorff-Larsen, Kresten, Page, R. & Peti, W., 16 Feb 2017, In: Molecular Cell. 65, 4, p. 644-658 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    The Complex Conformational Dynamics of Neuronal Calcium Sensor-1: A Single Molecule Perspective

    Choudhary, D., Kragelund, Birthe Brandt, Heidarsson, P. O. & Cecconi, C., 2018, In: Frontiers in Molecular Neuroscience. 11, p. 1-8 468.

    Research output: Contribution to journalReviewResearchpeer-review

  20. Published

    Avidity within the N-terminal anchor drives α-synuclein membrane interaction and insertion

    Cholak, E., Bugge, K., Khondker, A., Gauger, K., Pedraz-Cuesta, E., Pedersen, M. E., Bucciarelli, S., Vestergaard, Bente, Pedersen, Stine Helene Falsig, Rheinstädter, M. C., Langkilde, Annette Eva & Kragelund, Birthe Brandt, 2020, In: FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 34, 6, p. 7462-7482 21 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Distinct α-Synuclein:Lipid Co-Structure Complexes Affect Amyloid Nucleation through Fibril Mimetic Behavior

    Cholak, E., Bucciarelli, S., Bugge, K., Johansen, Nicolai Tidemand, Vestergaard, Bente, Arleth, Lise, Kragelund, Birthe Brandt & Langkilde, Annette Eva, Nov 2019, In: Biochemistry. 58, 50, p. 5052-5065

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    The tiger genome and comparative analysis with lion and snow leopard genomes

    Cho, Y. S., Hu, L., Hou, H., Lee, H., Xu, J., Kwon, S., Oh, S., Kim, H-M., Jho, S., Kim, S., Shin, Y-A., Kim, B. C., Kim, H., Kim, C., Luo, S-J., Johnson, W. E., Koepfli, K-P., Schmidt-Kuentzel, A., Turner, J. A., Marker, L. & 38 others, Harper, C., Miller, S. M., Jacobs, W., Bertola, L. D., Kim, T. H., Lee, S., Zhou, Q., Jung, H., Xu, X., Gadhvi, P., Xu, P., Xiong, Y., Luo, Y., Pan, S., Gou, C., Chu, X., Zhang, J., Liu, S., He, J., Chen, Y., Yang, L., Yang, Y., He, J., Liu, S., Wang, J., Kim, C. H., Kwak, H., Kim, J., Hwang, S., Ko, J., Kim, C., Kim, S., Bayarlkhagva, D., Paek, W. K., Kim, S., O'Brien, S. J., Wang, J. & Bhak, J., 2013, In: Nature Communications. 4, 7 p., 2433.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    What Is Extrachromosomal Circular DNA and What Does It Do?

    Chiu, R. W. K., Dutta, A., Hensson, A. G., Lo, Y. M. D., Mischel, P. & Regenberg, Birgitte, 2020, In: Clinical Chemistry. 66, 6, p. 754-759

    Research output: Contribution to journalEditorialResearchpeer-review

  24. Published

    The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima

    Chipman, A. D., Ferrier, D. E. K., Brena, C., Qu, J., Hughes, D. S. T., Schröder, R., Torres-Oliva, M., Znassi, N., Jiang, H., Almeida, F. C., Alonso, C. R., Apostolou, Z., Aqrawi, P., Arthur, W., Barna, J. C. J., Blankenburg, K. P., Brites, D., Capella-Gutiérrez, S., Coyle, M., Dearden, P. K. & 86 others, Du Pasquier, L., Duncan, E. J., Ebert, D., Eibner, C., Erikson, G., Evans, P. D., Extavour, C. G., Francisco, L., Gabaldón, T., Gillis, W. J., Goodwin-Horn, E. A., Green, J. E., Griffiths-Jones, S., Grimmelikhuijzen, Cornelis (Cok), Gubbala, S., Guigó, R., Han, Y., Hauser, Frank, Havlak, P., Hayden, L., Helbing, S., Holder, M., Hui, J. H. L., Hunn, J. P., Hunnekuhl, V. S., Jackson, L., Javaid, M., Jhangiani, S. N., Jiggins, F. M., Jones, T. E., Kaiser, T. S., Kalra, D., Kenny, N. J., Korchina, V., Kovar, C. L., Kraus, F. B., Lapraz, F., Lee, S. L., Lv, J., Mandapat, C., Manning, G., Mariotti, M., Mata, R., Mathew, T., Neumann, T., Newsham, I., Ngo, D. N., Ninova, M., Okwuonu, G., Ongeri, F., Palmer, W. J., Patil, S., Patraquim, P., Pham, C., Pu, L., Putman, N. H., Rabouille, C., Ramos, O. M., Rhodes, A. C., Robertson, H. E., Robertson, H. M., Ronshaugen, M., Rozas, J., Saada, N., Sánchez-Gracia, A., Scherer, S. E., Schurko, A. M., Siggens, K. W., Simmons, D., Stief, A., Stolle, E., Telford, M. J., Tessmar-Raible, K., Thornton, R., van der Zee, M., von Haeseler, A., Williams, J. M., Willis, J. H., Wu, Y., Zou, X., Lawson, D., Muzny, D. M., Worley, K. C., Gibbs, R. A., Akam, M. & Richards, S., 2014, In: P L o S Biology. 12, 11, p. e1002005 24 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking

    Chio, U. S., Palovcak, E., Smith, A. A. A., Autzen, Henriette Elisabeth, Muñoz, E. N., Yu, Z., Wang, F., Agard, D. A., Armache, J. P., Narlikar, G. J. & Cheng, Y., 2024, In: Nature Communications. 15, 1, 12 p., 2225.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Laboratory experiments on snail predation by Saqochromis codringtoni, a candidate for biological control of the snails that transmit schistosomiasis

    Chimbari, M. J., Madsen, H. & Ndamba, J., 1997, In: Tropical Medicine and Parasitology. 91, p. 95-102

    Research output: Contribution to journalJournal articleResearch

  27. Published

    Simulated field trials to evaluate the effect of Sarqochromis codringqtoni and Tilapia rendalli on snails in the presence and absence of aquatic plants

    Chimbari, M. J., Madsen, H. & Ndamba, J., 1997, In: Journal of Applied Ecology. 34, p. 871-877

    Research output: Contribution to journalJournal articleResearch

  28. Published

    Primer Registro de Abundancia Viral en Bahia Coliumo y Plataforma Continental Frente a Chile Central: First Record of Viral Abundance in Coliumo Bay and the Continental Shelf off Central Chile.

    Chiang, O. E., Middelboe, Mathias & Quiñones, R. A., 2007, In: Gayana. 71, 1, p. 124-131

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    First Record of Viral Abundance in Coliumo Bay and the Continental Shelf off Central Chile

    Chiang, O. E., Middelboe, Mathias & Quiñones, R. A., 2007, In: Gayana. 71, 1, p. 124-131

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Tyrosine kinases compete for growth hormone receptor binding and regulate receptor mobility and degradation

    Chhabra, Y., Seiffert, P., Gormal, R. S., Vullings, M., Lee, C. M. M., Wallis, T. P., Dehkhoda, F., Indrakumar, S., Jacobsen, Nina Louise, Lindorff-Larsen, Kresten, Durisic, N., Waters, M. J., Meunier, F. A., Kragelund, Birthe Brandt & Brooks, A. J., 2023, In: Cell Reports. 42, 5, 26 p., 112490.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    A growth hormone receptor SNP promotes lung cancer by impairment of SOCS2-mediated degradation

    Chhabra, Y., Wong, H. Y., Nikolajsen, L. F., Steinocher, H., Papadopulos, A., Tunny, K. A., Meunier, F. A., Smith, A. G., Kragelund, Birthe Brandt, Brooks, A. J. & Waters, M. J., 2018, In: Oncogene. 37, p. 489-501 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Bacteriochlorophyllide c C-8(2) and C-12(1) Methyltransferases are essential for adaptation to low light in Chlorobaculum tepidum

    Chew, A. G. M., Frigaard, Niels-Ulrik & Bryant, D. A., 2007, In: Journal of Bacteriology.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Autophagy mediate cellular reprogramming

    Chevalier, J. R., 2020, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  34. Published

    Vocal interactivity in-and-between humans, animals and robots

    Chetouani, M., Briefer, Elodie, Dassow, A., Marxer, R., Moore, R. K., Obin, N. & Stowell, D., 2023, In: Interaction Studies. 24, 1, p. 1-4 4 p.

    Research output: Contribution to journalEditorialResearchpeer-review

  35. Published

    Cuticular chemistry of males and females in the ant Formica fusca

    Chernenko, A., Holman, L., Helanterä, H. & Sundström, L., 2012, In: Journal of Chemical Ecology. 38, 12, p. 1474-1482 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Differential immune gene expression in sperm storage organs of leaf-cutting ants

    Cherasse, S., Baer, B., Schiøtt, M. & Boomsma, Jacobus J., 2018, In: Journal of Experimental Biology. 221, 6, 11 p., jeb173435.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Long divergent haplotypes introgressed from wild sheep are associated with distinct morphological and adaptive characteristics in domestic sheep

    Cheng, H., Zhang, Z., Wen, J., Lenstra, J. A., Heller, Rasmus, Cai, Y., Guo, Y., Li, M., Li, R., Li, W., He, S., Wang, J., Shao, J., Song, Y., Zhang, L., Billah, M., Wang, X., Liu, M. & Jiang, Y., 2023, In: PLOS Genetics. 19, 2, 27 p., e1010615.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Chaetoceros pauciramosus sp. nov. (Bacillariophyceae), a Widely Distributed Brackish Water Species in the C. lorenzianus Complex

    Chen, Z. Y., Lundholm, Nina, Moestrup, Øjvind, Kownacka, J. & Li, Y., 1 Nov 2018, In: Protist. 169, 5, p. 615-631 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Characterization of pMC11, a plasmid with dual origins of replication isolated from Lactobacillus casei MCJ and construction of shuttle vectors with each replicon

    Chen, Z., Lin, J., Ma, C., Zhao, S., She, Q. & Liang, Y., 2014, In: Applied Microbiology and Biotechnology. 98, 13, p. 5977-5989 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Novel bacterial sulfur oxygenase reductases from bioreactors treating gold-bearing concentrates

    Chen, Z., Liu, Y., Wu, J., She, Q., Jiang, C. & Liu, S., 2007, In: Applied Microbiology and Biotechnology. 74, 3, p. 688-98 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Principles for RNA metabolism and alternative transcription initiation within closely spaced promoters

    Chen, Y., Pai, A. A., Herudek, J., Lubas, M., Meola, N., Järvelin, A. I., Andersson, Robin, Pelechano, V., Steinmetz, L. M., Jensen, T. H. & Sandelin, Albin Gustav, 2016, In: Nature Genetics. 48, 9, p. 984-994 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Genome-wide Analysis of Gene Regulation: in fundamental biology and disease

    Chen, Y., 2014, Department of Biology, Faculty of Science, University of Copenhagen. 240 p.

    Research output: Book/ReportPh.D. thesisResearch

  43. Published

    Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data

    Chen, Y., Jørgensen, M., Kolde, R., Zhao, X., Parker, B., Valen, E., Wen, J. & Sandelin, Albin Gustav, 2011, In: BMC Genomics. 12, 1, 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Relation between NOD2 genotype and changes in innate signaling in Crohn's disease on mRNA and miRNA levels

    Chen, Y., Salem, M., Boyd, M., Lange, Jette Bornholdt, Li, Yuan, Coskun, M., Seidelin, Jakob Benedict, Sandelin, Albin Gustav & Nielsen, Ole Haagen, 2017, In: npj Genomic Medicine. 2, 11 p., 3.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Identification and evolution of avian endogenous foamy viruses

    Chen, Y., Wei, X., KU, thw266, Holmes, E. C. & Cui, J., 2019, In: Virus Evolution. 5, 2, 6 p., vez049.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. E-pub ahead of print

    International consensus guidelines for the definition, detection, and interpretation of autophagy-dependent ferroptosis

    Chen, X., Tsvetkov, A. S., Shen, H., Isidoro, C., Ktistakis, N. T., Linkermann, A., Koopman, W. J. H., Simon, H., Galluzzi, L., Luo, S., Xu, D., Gu, W., Peulen, O., Cai, Q., Rubinsztein, D. C., Chi, J., Zhang, D. D., Li, C., Toyokuni, S., Liu, J. & 49 others, Roh, J., Dai, E., Juhasz, G., Liu, W., Zhang, J., Yang, M., Liu, J., Zhu, L., Zou, W., Piacentini, M., Ding, W., Yue, Z., Xie, Y., Petersen, Morten, Gewirtz, D. A., Mandell, M. A., Chu, C. T., Sinha, D., Eftekharpour, E., Zhivotovsky, B., Besteiro, S., Gabrilovich, D. I., Kim, D., Kagan, V. E., Bayir, H., Chen, G., Ayton, S., Lünemann, J. D., Komatsu, M., Krautwald, S., Loos, B., Baehrecke, E. H., Wang, J., Lane, J. D., Sadoshima, J., Yang, W. S., Gao, M., Münz, C., Thumm, M., Kampmann, M., Yu, D., Lipinski, M. M., Jones, J. W., Jiang, X., Zeh, H. J., Kang, R., Klionsky, D. J., Kroemer, G. & Tang, D., 2024, (E-pub ahead of print) In: Autophagy. p. 1-34

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Viral integration drives multifocal HCC during the occult HBV infection

    Chen, X-P., Long, X., Jia, W., Wu, H-J., Zhao, J., Liang, H-F., Laurence, A., Zhu, J., Dong, D., Chen, Y., Lin, L., Xia, Y-D., Li, W-Y., Li, G-B., Zhao, Z-K., Wu, K., Hou, Y., Yu, J-J., Xiao, W., Wang, G-P. & 6 others, Zhu, P., Chen, W., Bai, M., Jian, Y., Kristiansen, Karsten & Chen, Q., 2019, In: Journal of Experimental & Clinical Cancer Research. 38, 11 p., 261.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Sequencing of methylase-accessible regions in integral circular extrachromosomal DNA reveals differences in chromatin structure

    Chen, W., Weng, Z., Xie, Z., Xie, Y., Zhang, C., Chen, Z., Ruan, F., Wang, J., Sun, Y., Fang, Y., Guo, M., Tong, Y., Li, Y. & Tang, C., 2021, In: Epigenetics & Chromatin. 14, 11 p., 40.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle

    Chen, S., Zhang, G., Shao, C., Huang, Q., Liu, G., Zhang, P., Song, W., An, N., Chalopin, D., Volff, J-N., Hong, Y., Li, Q., Sha, Z., Zhou, H., Xie, M., Yu, Q., Liu, Y., Xiang, H., Wang, N., Wu, K. & 25 others, Yang, C., Zhou, Q., Liao, X., Yang, L., Hu, Q., Zhang, J., Meng, L., Jin, L., Tian, Y., Lian, J., Yang, J., Miao, G., Liu, S., Liang, Z., Yan, F., Li, Y., Sun, B., Zhang, H., Zhang, J., Zhu, Y., Du, M., Zhao, Y., Schartl, M., Tang, Q. & Wang, J., 2014, In: Nature Genetics. 46, 3, p. 253-262 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Vegetation phenology and its ecohydrological implications from individual to global scales

    Chen, S., Fu, Y. H., Hao, F., Li, X., Zhou, S., Liu, C. & Tang, Jing, 2022, In: Geography and Sustainability. 3, 4, p. 334-338 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review