- 2022
- Published
Possible Functional Roles of Patellamides in the Ascidian-Prochloron Symbiosis
Baur, P., Kühl, Michael, Comba, P. & Behrendt, L., 2022, In: Marine Drugs. 20, 2, 20 p., 119.Research output: Contribution to journal › Review › Research › peer-review
- Published
Pot-pollen supplementation reduces fasting glucose and modulates the gut microbiota in high-fat/high-sucrose fed C57BL/6 mice
Rebelo, K. S., Nunez, C. E. C., Cazarin, C. B. B., Maróstica Júnior, M. R., Kristiansen, Karsten & Danneskiold-Samsøe, Niels Banhos, 2022, In: Food & Function. 13, 7, p. 3982-3992 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Predator Field and Colony Morphology Determine the Defensive Benefit of Colony Formation in Marine Phytoplankton
Ryderheim, F., Hansen, Per Juel & Kiørboe, T., 2022, In: Frontiers in Marine Science. 9, 10 p., 829419.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Predicting and interpreting large-scale mutagenesis data using analyses of protein stability and conservation
Høie, M. H., Cagiada, Matteo, Frederiksen, A. H. B., Stein, Amelie & Lindorff-Larsen, Kresten, 2022, In: Cell Reports. 38, 2, 15 p., 110207.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Predicting water quality from geospatial lake, catchment, and buffer zone characteristics in temperate lowland lakes
Martinsen, K. T. & Sand-Jensen, Kaj, 2022, In: Science of the Total Environment. 851, 12 p., 158090.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prevalence of genetically similar Flavobacterium columnare phages across aquaculture environments reveals a strong potential for pathogen control
Runtuvuori-Salmela, A., Kunttu, H. M. T., Laanto, E., Almeida, G. M. F., Mäkelä, K., Middelboe, Mathias & Sundberg, L., 2022, In: Environmental Microbiology. 24, 5, p. 2404-2420 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Probing the genomic limits of de-extinction in the Christmas Island rat
Lin, J., Duchene, David, Carøe, C., Smith, O., Ciucani, M. M., Niemann, Jonas, Richmond, D., Greenwood, A. D., MacPhee, R., KU, thw266, Gopalakrishnan, Shyam & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 7, p. 1650-1656.e3Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Production of an Active, Human Membrane Protein in Saccharomyces cerevisiae: Full-Length FICD
Virolainen, M. S., Søltoft, C. L., Pedersen, Per Amstrup & Ellgaard, Lars, 2022, In: International Journal of Molecular Sciences. 23, 5, 17 p., 2458.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Profiling the Atopic Dermatitis Epidermal Transcriptome by Tape Stripping and BRB-seq
Hu, T., Todberg, T., Andersen, D., Danneskiold-Samsøe, Niels Banhos, Hansen, Sofie Boesgaard Neestrup, Kristiansen, Karsten, Ewald, D. A., Brix, S., da Rosa, J. C., Hoof, I., Skov, Lone & Litman, Thomas, 2022, In: International Journal of Molecular Sciences. 23, 11, 12 p., 6140.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Promoter sequence and architecture determine expression variability and confer robustness to genetic variants
Einarsson, H., Salvatore, Marco, Vaagenso, C., Alcaraz, N., Lange, Jette Bornholdt, Rennie, Sarah & Andersson, Robin, 2022, In: eLife. 2022, 36 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prophylactic treatment of breast implants with a solution of gentamicin, vancomycin and cefazolin antibiotics for women undergoing breast reconstructive surgery: protocol for a randomised, double-blind, placebo-controlled trial (The BREAST-AB trial)
Hemmingsen, M. N., Larsen, A., Weltz, T. K., Ørholt, M., Wiberg, S., Bennedsen, A. K., Bille, C., Carstensen, L. F., Jensen, L. T., Bredgaard, R., Koudahl, V., Schmidt, Volker-Jürgen, Vester-Glowinski, Peter Viktor, Hølmich, Lisbet Rosenkrantz, Sørensen, Søren Johannes, Bjarnsholt, Thomas, Damsgaard, Tine M Engberg & Herly, Mikkel, 2022, In: BMJ Open. 12, 9, p. e058697Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteasome inhibition alters mitotic progression through the upregulation of centromeric α-Satellite RNAs
Cáceres-Gutiérrez, R. E., Andonegui, M. A., Oliva-Rico, D. A., González-Barrios, R., Luna, F., Arriaga-Canon, C., López-Saavedra, A., Prada, D., Castro, C., Parmentier, L., Díaz-Chávez, J., Alfaro-Mora, Y., Navarro-Delgado, E. I., Fabian-Morales, E., Tran, B., Shetty, J., Zhao, Y., Alcaraz, N., De la Rosa, C., Reyes, J. L. & 4 others, , 2022, In: FEBS Journal. 289, 7, p. 1858-1875 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Protein domain-dependent vesiculation of Lipoprotein A, a protein that is important in cell wall synthesis and fitness of the human respiratory pathogen Haemophilus influenzae
Jalalvand, F., Su, Y., Manat, G., Chernobrovkin, A., Kadari, M., Jonsson, S., Janousková, M., Rutishauser, D., Semsey, S., Løbner-Olesen, Anders, Sandblad, L., Flärdh, K., Mengin-Lecreulx, D., Zubarev, R. A. & Riesbeck, K., 2022, In: Frontiers in Cellular and Infection Microbiology. 12, 17 p., 984955.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomic Analysis of the Protective Effect of Eriodictyol on Benzo(a)pyrene-Induced Caco-2 Cytotoxicity
Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Frontiers in Nutrition. 9, 14 p., 839364.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomics and Metabolomics Profiling of Pork Exudate Reveals Meat Spoilage during Storage
Zhao, Fan, Wei, Z., Bai, Y., Li, C., Zhou, G., Kristiansen, Karsten & Wang, Chong, 2022, In: Metabolites. 12, 7, 15 p., 570.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pseudoreplication in genomics-scale data sets
Waples, R. S., Waples, R. K. & Ward, E. J., 2022, In: Molecular Ecology Resources. 22, 2, p. 503-518 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantification and fate of plasmid-specific bacteriophages in wastewater: Beyond the F-coliphages
He, Z., Parra, B., Nesme, Joseph, Smets, B. F. & Dechesne, A., 2022, In: Water Research. 227, 8 p., 119320.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rapid Response to Experimental Warming of a Microbial Community Inhabiting High Arctic Patterned Ground Soil
Newsham, K. K., Danielsen, Birgitte Kortegaard, Biersma, Elisabeth M., Elberling, Bo, Hillyard, G., Kumari, P., Priemé, Anders, Woo, C. & Yamamoto, N., 2022, In: Biology. 11, 12, 17 p., 1819.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rdh54 stabilizes Rad51 at displacement loop intermediates to regulate genetic exchange between chromosomes
Keymakh, M., Dau, J., Hu, J., Ferlez, B., Lisby, Michael & Brooks Crickard, J., 2022, In: PLOS Genetics. 18, 9, 26 p., e1010412.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Re-visiting soil carbon and nitrogen stocks in a temperate heathland seven years after the termination of free air CO2 enrichment (FACE)
Li, Qiaoyan, Ambus, Per Lennart, Michelsen, Anders, Schmidt, Inger Kappel, Beier, Claus, Dietzen, Christiana Amalie, Reinsch, S., Arndal, M. F. & Larsen, Klaus Steenberg, 2022, In: Geoderma. 428, 7 p., 116185.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reconstructing the Origins of the Somatostatin and Allatostatin-C Signaling Systems Using the Accelerated Evolution of Biodiverse Cone Snail Toxins
Koch, Thomas Lund, Ramiro, Iris Bea L. , Flórez Salcedo, P., Engholm, E., Jensen, Knud Jørgen, Chase, K., Olivera, B. M., Bjørn-Yoshimoto, Walden, Safavi-hemami, H. & True, J. (ed.), 2022, In: Molecular Biology and Evolution. 39, 4, 20 p., msac075.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reduced chromatin accessibility correlates with resistance to Notch activation
van den Ameele, J., Krautz, Robert, Cheetham, S. W., Donovan, A. P. A., Llorà-Batlle, O., Yakob, R. & Brand, A. H., 2022, In: Nature Communications. 13, 1, 10 p., 2210.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of the Escherichia coli protein synthesis machinery in response to phosphate starvation
pfv225, pfv225, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 129 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Removal of chromophoric dissolved organic matter under combined photochemical and microbial degradation as a response to different irradiation intensities
Kragh, T., Sand-Jensen, Kaj, Kristensen, E., Pedersen, Ole & Madsen-Østerbye, M., 2022, In: Journal of Environmental Sciences. 118, p. 76-86Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reply to ‘Paracetamol use in pregnancy — caution over causal inference from available data’; ‘Handle with care — interpretation, synthesis and dissemination of data on paracetamol in pregnancy’
Bauer, A. Z., Swan, S. H., Kriebel, D., Liew, Z., Taylor, H. S., Bornehag, C., M. Andrade, A., Olsen, J., Jensen, Rigmor Højland, Mitchell, R. T., Skakkebæk, Niels Erik & Kristensen, D. M., 2022, In: Nature Reviews Endocrinology. 18, 3, p. 192 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Reply to ‘Paracetamol use in pregnancy — neglecting context promotes misinterpretation’
Bauer, A. Z., Swan, S. H., Kriebel, D., Liew, Z., Taylor, H. S., Bornehag, C., Andrade, A. M., Olsen, J., Jensen, Rigmor Højland, Mitchell, R. T., Skakkebæk, Niels Erik & Kristensen, D. M., 2022, In: Nature Reviews Endocrinology. 18, 1 p., 386.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Requirement of a deeply conserved ARGONAUTE phospho-cluster for target- mediated microRNA degradation in plants
Guo, F., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 118 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Reversible mutations in gliding motility and virulence genes: A flexible and efficient phage defence mechanism in Flavobacterium psychrophilum
Jørgensen, J., Sundell, K., Castillo, D., Dramshøj, L. S., Jørgensen, N. B., Madsen, S. B., Landor, L., Wiklund, T., Donati, V. L., Madsen, L., Dalsgaard, I. & Middelboe, Mathias, 2022, In: Environmental Microbiology. 24, 10, p. 4915-4930Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Role of ATP and P2X7 receptor in pancreatic cancer
Magni, Lara, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 151 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Roots in armour: Protective traits of the barrier to radial oxygen loss
Peralta Ogorek, Lucas León, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 193 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
SCAI promotes error-free repair of DNA interstrand crosslinks via the Fanconi anemia pathway
Schubert, Lisa, Hendriks, Ivo Alexander, Hertz, Emil Peter Thrane, Wu, Wei, Sellés Baiget, Selene, Hoffmann, Saskia, Bagge, Keerthana Stine Viswalingam, Gallina, I., Pentakota, S., Benedict, Bente, Johansen, Joachim, Apelt, K., Luijsterburg, M. S., Rasmussen, Simon, Lisby, Michael, Liu, Ying, Nielsen, Michael Lund, Mailand, Niels & Duxin, Julien, 2022, In: EMBO Reports. 23, 4, 20 p., e53639.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Saliva: a new opportunity for fluid biopsy
Huang, Z., Yang, X., Huang, Y., Tang, Z., Chen, Y., Liu, H., Huang, M., Qing, L., Li, L., Wang, Q., Jie, Zhuye, Jin, X. & Jia, B., 2022, In: Clinical Chemistry and Laboratory Medicine. 61, 1, 29 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
SatuRn: Scalable analysis of differential transcript usage for bulk and single-cell RNA-sequencing applications
Gilis, J., Vitting-Seerup, K., Van den Berge, K. & Clement, L., 2022, In: F1000Research. 10, 43 p., 374.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scaling of maneuvering performance in baleen whales: larger whales outperform expectations
Segre, P. S., Gough, W. T., Roualdes, E. A., Cade, D. E., Czapanskiy, M. F., Fahlbusch, J., Kahane-Rapport, S. R., Oestreich, W. K., Bejder, L., Bierlich, K. C., Burrows, J. A., Calambokidis, J., Chenoweth, E. M., di Clemente, J., Durban, J. W., Fearnbach, H., Fish, F. E., Friedlaender, A. S., Hegelund, P., Johnston, D. W. & 13 others, , 2022, In: Journal of Experimental Biology. 225, 5, 15 p., jeb243224.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scientists' warning of threats to mountains
Schmeller, D. S., Urbach, D., Bates, K., Catalan, J., Cogălniceanu, D., Fisher, M. C., Friesen, J., Füreder, L., Gaube, V., Haver, M., Jacobsen, D., Le Roux, G., Lin, Y-P., Loyau, A., Machate, O., Mayer, A., Palomo, I., Plutzar, C., Sentenac, H., Sommaruga, R. & 2 others, , 2022, In: The Science of the Total Environment. 853, 12 p., 158611.Research output: Contribution to journal › Review › Research › peer-review
- Published
Screening for Highly Transduced Genes in Staphylococcus aureus Revealed Both Lateral and Specialized Transduction
Bowring, Janine Zara, Su, Y., Alsaadi, Ahlam Musaibeh M, Svenningsen, Sine Lo, Parkhill, J. & Ingmer, Hanne, 2022, In: Microbiology Spectrum. 10, 1, e02423-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scrub encroachment promotes biodiversity in temperate European wetlands under eutrophic conditions
Brunbjerg, A. K., Fløjgaard, C., Frøslev, Tobias Guldberg, Andersen, D. K., Bruun, Hans Henrik, Dalby, L., Goldberg, I., Lehmann, L. J., Moeslund, J. E. & Ejrnæs, R., 2022, In: Ecology and Evolution. 12, 11, 19 p., e9445.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Semi-automated assembly of high-quality diploid human reference genomes
Jarvis, E. D., Formenti, G., Rhie, A., Guarracino, A., Yang, C., Wood, J., Tracey, A., Thibaud-Nissen, F., Vollger, M. R., Porubsky, D., Cheng, H., Asri, M., Logsdon, G. A., Carnevali, P., Chaisson, M. J. P., Chin, C. S., Cody, S., Collins, J., Ebert, P., Escalona, M. & 31 others, , 2022, In: Nature. 611, 7936, 34 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequencing introduced false positive rare taxa lead to biased microbial community diversity, assembly, and interaction interpretation in amplicon studies
Jia, Y., Zhao, S., Guo, W., Peng, L., Zhao, F., Wang, L., Fan, G., Zhu, Y., Xu, D., Liu, G., Wang, R., Fang, X., Zhang, H., Kristiansen, Karsten, Zhang, W. & Chen, J., 2022, In: Environmental Microbiomes. 17, 18 p., 43.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sex in the wild: repeated observations of planktonic ciliate conjugation from field samples
Romano, F., Symiakaki, K. & Pitta, P., 2022, In: Journal of Plankton Research. 44, 2, p. 333-336 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sialylation of N-glycans affects the lipid secretion governed by specialized secretory lysosomal organelles through an effect on the V-ATPase
Khoder-Agha, F., Song, Ming, Borre, M. T., Marinova, I. N., Ye, Z., Pedersen, Stine Helene Falsig, Dabelsteen, Sally & Wandall, Hans H., 2022, In: Glycobiology. 32, 11, p. 1012-1013 2 p., P103.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Sigalionidae, Pisioninae Ehlers, 1901
Gonzalez, B. C., Worsaae, Katrine & Eibye-Jacobsen, Danny, 2022, Pleistoannelida, Errantia II. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, p. 139-151 13 p. (Handbook of Zoology, Vol. 4).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
SignalP 6.0 predicts all five types of signal peptides using protein language models
Teufel, Felix Georg, Almagro Armenteros, J. J., Johansen, A. R., Gíslason, M. H., Pihl, S. I., Tsirigos, Konstantinos, Winther, Ole, Brunak, Søren, von Heijne, G. & Nielsen, H., 2022, In: Nature Biotechnology. 40, p. 1023-1025Research output: Contribution to journal › Comment/debate › Research
- Published
Simple attributes predict the value of plants as hosts to fungal and arthropod communities
Bruun, Hans Henrik, Brunbjerg, A. K., Dalby, L., Fløjgaard, C., Frøslev, Tobias Guldberg, Haarder, S., Heilmann-Clausen, Jacob, Høye, T. T., Læssøe, Thomas & Ejrnæs, R., 2022, In: Oikos. 2022, 4, 11 p., e08823.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Simultaneous visualization of flow fields and oxygen concentrations to unravel transport and metabolic processes in biological systems
Ahmerkamp, S., Jalaluddin, F. M., Cui, Y., Brumley, D. R., Pacherres, Cesar, Berg, J. S., Stocker, R., Kuypers, M. M. M., Koren, K. & Behrendt, L., 2022, In: Cell Reports Methods. 2, 5, 18 p., 100216.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-Nucleus RNA Sequencing and Spatial Transcriptomics Reveal the Immunological Microenvironment of Cervical Squamous Cell Carcinoma
Ou, Z., Lin, S., Qiu, J., Ding, W., Ren, P., Chen, D., Wang, J., Tong, Y., Wu, D., Chen, A., Deng, Y., Cheng, M., Peng, T., Lu, H., Yang, H., Wang, J., Jin, X., Ma, D., Xu, X., Wang, Y. & 2 others, , 2022, In: Advanced Science. 9, 29, 20 p., 2203040.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-cell RNA sequencing technologies and applications: A brief overview
Jovic, D., Liang, Xue, Zeng, H., Lin, L., Xu, F. & Luo, Y., 2022, In: Clinical and Translational Medicine. 12, 3, 20 p., e694.Research output: Contribution to journal › Review › Research › peer-review
- Published
Single-cell Stereo-seq reveals induced progenitor cells involved in axolotl brain regeneration
Wei, X., Fu, S., Li, H., Liu, Y., Wang, S., Feng, W., Yang, Y., Liu, X., Zeng, Y-Y., Cheng, M., Lai, Y., Qiu, X., Wu, L., Zhang, N., Jiang, Y., Xu, J., Su, X., Peng, C., Han, L., Lou, W. P-K. & 16 others, , 2022, In: Science. 377, 6610, 10 p., eabp9444.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-cell transcriptomic landscape of the sheep rumen provides insights into physiological programming development and adaptation of digestive strategies
Yuan, Y., Sun, D., Qin, T., Mao, S., Zhu, W., Yin, Y., Huang, J., Heller, Rasmus, Li, Z., Liu, J. & Qiu, Q., 2022, In: Zoological research. 43, 4, p. 634-647 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sinking Trichodesmium fixes nitrogen in the dark ocean
Benavides, M., Bonnet, S., Le Moigne, F. A. C., Armin, G., Inomura, K., Hallstrøm, S., Riemann, Lasse, Berman-Frank, I., Poletti, E., Garel, M., Grosso, O., Leblanc, K., Guigue, C., Tedetti, M. & Dupouy, C., 2022, In: The ISME Journal. 16, 10, p. 2398-2405 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Site-specific responses of fungal and bacterial abundances to experimental warming in litter and soil across Arctic and alpine tundra
Jeanbille, M., Clemmensen, K., Juhanson, J., Michelsen, Anders, Cooper, E. J., Henry, G. H. R., Hofgaard, A., Hollister, R. D., Jónsdóttir, I. S., Klanderud, K., Tolvanen, A. & Hallin, S., 2022, In: Arctic Science. 8, 3, p. 992-1005 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Skeletal muscle adaptations to exercise are not influenced by metformin treatment in humans: secondary analyses of 2 randomised, clinical trials
Pilmark, N. S., Oberholzer, L., Halling, Jens Frey, Kristensen, Jonas Møller, Bønding, C. P., Elkjær, I., Lyngbæk, M., Elster, G., Siebenmann, C., Holm, N. F., Birk, Jesper Bratz, Larsen, E. L., Meinild-Lundby, A., Wojtaszewski, Jørgen F P, Pilegaard, Henriette, Poulsen, H., Pedersen, Bente Klarlund, Hansen, K. B. & Karstoft, Kristian, 2022, In: Applied Physiology, Nutrition and Metabolism. 47, 3, p. 309-320 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Small Hydropower — Small Ecological Footprint? A Multi-Annual Environmental Impact Analysis Using Aquatic Macroinvertebrates as Bioindicators: Part 1: Effects on Community Structure
Scotti, A., Jacobsen, Dean, Ștefan, V., Tappeiner, U. & Bottarin, R., 2022, In: Frontiers in Environmental Science. 10, 13 p., 902603.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Small hydropower — Small ecological footprint? A multi-annual environmental impact analysis using aquatic macroinvertebrates as bioindicators: Part 2: Effects on functional diversity
Scotti, A., Jacobsen, Dean & Bottarin, R., 2022, In: Frontiers in Environmental Science. 10, 14 p., 904547.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Smooth muscle ATP-sensitive potassium channels mediate migraine-relevant hypersensitivity in mouse models
Christensen, S. L., Rasmussen, Rikke Holm, Cour, S. L., Ernstsen, C., Hansen, Thomas Folkmann, Kogelman, L. J. A., Lauritzen, S. P., Guzaite, G., Styrishave, Bjarne, Janfelt, Christian, Christensen, Søren Tvorup, Aziz, Q., Tinker, A., Jansen-Olesen, I., Olesen, Jes & Kristensen, D. M., 2022, In: Cephalalgia. 42, 2, p. 93-107Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Social environment affects sensory gene expression in ant larvae
Pulliainen, U., Morandin, C., Bos, N., Sundström, L. & Schultner, E., 2022, In: Insect Molecular Biology. 31, 1, p. 1-9 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sodium, Glucose and Dysregulated Glucagon Secretion: The Potential of Sodium Glucose Transporters
Armour, Sarah Louise, Früh, Alexander Erwin & Knudsen, Jakob Grunnet, 2022, In: Frontiers in Pharmacology. 13, 6 p., 837664.Research output: Contribution to journal › Review › Research › peer-review
- Published
Soil moisture regulates warming responses of autumn photosynthetic transition dates in subtropical forests
Fu, Y. H., Li, X., Chen, S., Wu, Z., Su, J., Li, X., Li, S., Zhang, J., Tang, Jing & Xiao, J., 2022, In: Global Change Biology. 28, 16, p. 4935-4946 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil texture is a stronger driver of the maize rhizosphere microbiome and extracellular enzyme activities than soil depth or the presence of root hairs
Yim, B., Ibrahim, Z., Rüger, L., Ganther, M., Maccario, Lorrie, Sørensen, Søren Johannes, Heintz-Buschart, A., Tarkka, M. T., Vetterlein, D., Bonkowski, M., Blagodatskaya, E. & Smalla, K., 2022, In: Plant and Soil. 478, 1-2, p. 229-251 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Soil volatile organic compound emissions in response to soil warming and nitrogen deposition
Romero-Olivares, A. L., Davie-Martin, Cleo Lisa, Kramshøj, M., Rinnan, Riikka & Frey, S. D., 2022, In: Elementa. 10, 1, 11 p., 65.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Solanimycin: Biosynthesis and Distribution of a New Antifungal Antibiotic Regulated by Two Quorum-Sensing Systems
Matilla, M. A., Monson, R. E., Murphy, A., Schicketanz, Muriel Leandra, Rawlinson, A., Duncan, C., Mata, J., Leeper, F. & Salmond, G. P. C., 2022, In: mBio. 13, 6, 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Somatic structural variant formation is guided by and influences genome architecture
Sidiropoulos, N., Mardin, B. R., Rodriguez Gonzalez, Francisco G, Bochkov, I. D., Garg, S., Stuetz, A. M., Korbel, J. O., Aiden, E. L. & Weischenfeldt, Joachim Lütken, 2022, In: Genome Research. 32, 4, p. 643-655Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Somatostatin venom analogs evolved by fish-hunting cone snails: From prey capture behavior to identifying drug leads
Ramiro, Iris Bea L. , Bjørn-Yoshimoto, Walden, Imperial, J. S., Gajewiak, J., Salcedo, P. F., Watkins, M., Taylor, D., Resager, W., Ueberheide, B., Bräuner, Hans, Whitby, F. G., Hill, C. P., Martin, L. F., Patwardhan, A., Concepcion, G. P., Olivera, B. M. & Safavi-Hemami, H., 2022, In: Science Advances. 8, 12, 16 p., eabk1410.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial and Temporal Patterns of Genetic Diversity and Structure in Danish Populations of the Alcon Blue Butterfly Phengaris alcon (Denis & Schiffermüller)
Boe, A. M. B., Simonsen, T. J., Colding-Jørgensen, Camilla Tvede, Folman, P. H., Jensen, T. T., Spencer, K. J., Thomsen, P. F. & Nash, David Richard, 2022, In: Diversity. 14, 12, 1098.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial genetic patterns in African wild dogs reveal signs of effective dispersal across southern Africa
Tensen, L., Jansen van Vuuren, B., Groom, R., Bertola, Laura, de Iongh, H., Rasmussen, G., Du Plessis, C., Davies-Mostert, H., van der Merwe, D., Fabiano, E., Lages, F., Rocha, F., Monterroso, P. & Godinho, R., 2022, In: Frontiers in Ecology and Evolution. 10, 12 p., 992389.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatiotemporal influences of climate and humans on muskox range dynamics over multiple millennia
Canteri, Elisabetta, Brown, S. C., Schmidt, N. M., Heller, Rasmus, Nogues, David Bravo & Fordham, D. A., 2022, In: Global Change Biology. 28, 22, p. 6602-6617 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatiotemporal mapping of gene expression landscapes and developmental trajectories during zebrafish embryogenesis
Liu, C., Li, R., Li, Y., Lin, X., Zhao, K., Liu, Q., Wang, S., Yang, X., Shi, X., Ma, Y., Pei, C., Wang, H., Bao, W., Hui, J., Yang, T., Xu, Z., Lai, T., Berberoglu, M. A., Sahu, S. K., Esteban, M. A. & 8 others, , 2022, In: Developmental Cell. 57, 10, p. 1284-1298.e5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball-patterned arrays
Chen, A., Liao, S., Cheng, M., Ma, K., Wu, L., Lai, Y., Qiu, X., Yang, J., Xu, J., Hao, S., Wang, X., Lu, H., Chen, X., Liu, X., Huang, X., Li, Z., Hong, Y., Jiang, Y., Peng, J., Liu, S. & 49 others, , 2022, In: Cell. 185, 10, p. 1777-1792.e21Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Species-specific traits mediate avian demographic responses under past climate change
Germain, Ryan Ross, Feng, S., Chen, G., Graves, G. R., Tobias, J. A., Rahbek, Carsten, Lei, F., Fjeldså, Jon, Hosner, Peter Andrew, Gilbert, M Thomas P, KU, thw266 & Nogues, David Bravo, 2022, bioRxiv, 24 p.Research output: Working paper › Preprint › Research
- Published
Specific gut bacterial responses to natural diets of tropical birds
Bodawatta, Kasun Harshana, Klečková, I., Klečka, J., Pužejová, K., Koane, B., Poulsen, Michael, Jønsson, Knud Andreas & Sam, K., 2022, In: Scientific Reports. 12, 15 p., 713.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sperm Storage Costs Determine Survival and Immunocompetence in Newly Mated Queens of the Leaf-Cutting Ant Atta colombica
Baer-Imhoof, B., Beckers, Susanne den Boer, Boomsma, Jacobus J. & Baer, B., 2022, In: Frontiers in Ecology and Evolution. 9, 10 p., 759183.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Standards recommendations for the Earth BioGenome Project
Lawniczak, M. K. N., Durbin, R., Flicek, P., Lindblad-Toh, K., Wei, X., Archibald, J. M., Baker, W. J., Belov, K., Blaxter, M. L., Bonet, T. M., Childers, A. K., Coddington, J. A., Crandall, K. A., Crawford, A. J., Davey, R. P., Palma, F. D., Fang, Q., Haerty, W., Hall, N., Hoff, K. J. & 25 others, , 2022, In: PNAS. 119, 4, 8 p., e2115639118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Strategies for Heterologous Expression, Synthesis, and Purification of Animal Venom Toxins
Rivera-de-Torre, E., Rimbault, C., Jenkins, T. P., Sørensen, C. V., Damsbo, A., Saez, N. J., Duhoo, Y., Hackney, Celeste Menuet, Ellgaard, Lars & Laustsen, A. H., 2022, In: Frontiers in Bioengineering and Biotechnology. 9, 26 p., 811905.Research output: Contribution to journal › Review › Research › peer-review
- Published
Stream restoration and ecosystem functioning in lowland streams
Baattrup-Pedersen, A., Alnoe, A. B., Rasmussen, J. J., Levi, P. S., Friberg, N. & Riis, T., 2022, In: Ecological Engineering. 184, 9 p., 106782.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stream-Lake Connectivity Is an Important Control of Fluvial CO2 Concentrations and Emissions in Catchments
Sand-Jensen, Kaj, Riis, T., Kjær, Johan Emil & Martinsen, K. T., 2022, In: Earth and Space Science. 9, 12, 12 p., e2022EA002664.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Strong isoprene emission response to temperature in tundra vegetation
Seco, Roger, Holst, T., Davie-Martin, Cleo Lisa, Simin, Tihomir, Guenther, A., Pirk, N., Rinne, J. & Rinnan, Riikka, 2022, In: PNAS. 119, 38, 7 p., e2118014119.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural basis of ion uptake in copper-transporting P1B-type ATPases
Salustros, N., Gronberg, C., Abeyrathna, N. S., Lyu, Pin, Oradd, F., Wang, Kaituo, Andersson, M., Meloni, G. & Gourdon, Pontus Emanuel, 2022, In: Nature Communications. 13, 1, 11 p., 5121.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structural variations between small alarmone hydrolase dimers support different modes of regulation of the stringent response
Bisiak, F., Chrenková, A., Zhang, S., Pedersen, J. N., Otzen, D. E., ZHANG, YONG & Brodersen, D. E., 2022, In: Journal of Biological Chemistry. 298, 7, 16 p., 102142.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure and functional analysis of PIB-type ATPases
Lyu, Pin, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 281 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges
Martinsen, J. H., Saar, Daniel, Fernandes, Catarina, Schuler, B., Bugge, K. & Kragelund, Birthe Brandt, 2022, In: Protein Science. 31, 4, p. 918-932 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Studies on how protein missense mutations affect protein stability and degradation
Grønbæk-Thygesen, Martin, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 203 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Successful treatment of psoriasis with adalimumab induced no changes in the gut microbiota
Todberg, T., Egeberg, Alexander, Zachariae, Claus, Sørensen, N., Pedersen, Oluf Borbye & Skov, Lone, 2022, In: Journal of the European Academy of Dermatology and Venereology. 36, 6, p. e464-e467 4 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Survival and Genome Diversity of Vibrio parahaemolyticus Isolated from Edible Aquatic Animals
Xu, D., Peng, Xu, Xie, L. & Chen, L., 2022, In: Diversity. 14, 5, 23 p., 350.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synergy between Mecillinam and Ceftazidime/Avibactam or Avibactam against Multi-Drug-Resistant Carbapenemase-Producing Escherichia coli and Klebsiella pneumoniae
List, K. K., Kolpen, Mette, Kragh, K. N., Charbon, Godefroid, Radmer, S., Hansen, F., Løbner-Olesen, Anders, Frimodt-Møller, N. & Hertz, F. B., 2022, In: Antibiotics. 11, 10, 13 p., 1280.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Systematic position of the Clicking Frog (Kassinula Laurent, 1940), the problem of chimeric sequences and the revised classification of the family Hyperoliidae
Nečas, T., Kielgast, J., Nagy, Z. T., Kusamba Chifundera, Z. & Gvoždík, V., 2022, In: Molecular Phylogenetics and Evolution. 174, 11 p., 107514.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Taking metagenomics under the wings
Chua, Physilia & Rasmussen, Jacob Agerbo, 2022, In: Nature Reviews Microbiology. 20, 8, p. 447 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Targeted removal of mitochondrial DNA from mouse and human extrachromosomal circular DNA with CRISPR-Cas9
Feng, Weijia, Arrey Tané, Gerard, Zole, Egija, Iv, W., Liang, Xue, Han, Peng, Mohiyuddin, M., Pilegaard, Henriette & Regenberg, Birgitte, 2022, In: Computational and Structural Biotechnology Journal. 20, p. 3059-3067 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Telomeric C-circles localize at nuclear pore complexes in Saccharomyces cerevisiae
Aguilera, P., Dubarry, M., Hardy, J., Lisby, Michael, Simon, M. & Géli, V., 2022, In: EMBO Journal. 41, 6, 14 p., e108736.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temperature Effects on Leaf and Epiphyte Photosynthesis, Bicarbonate Use and Diel O2 Budgets of the Seagrass Zostera marina L.
Hansen, A. B., Pedersen, A. S., Kühl, Michael & Brodersen, Kasper Elgetti, 2022, In: Frontiers in Marine Science. 9, 13 p., 822485.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Temperature and spatial connectivity drive patterns in freshwater macroinvertebrate diversity across the Arctic
Lento, J., Culp, J. M., Levenstein, B., Aroviita, J., Baturina, M. A., Bogan, D., Brittain, J. E., Chin, K., Christoffersen, K. S., Docherty, C., Friberg, N., Ingimarsson, F., Jacobsen, D., Lau, D. C. P., Loskutova, O. A., Milner, A., Mykrä, H., Novichkova, A. A., Ólafsson, J. S., Schartau, A. K. & 2 others, , 2022, In: Freshwater Biology. 67, 1, p. 159-175 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Cycas genome and the early evolution of seed plants
Liu, Y., Wang, S., Li, L., Yang, T., Dong, S., Wei, T., Wu, S., Liu, Y., Gong, Y., Feng, X., Ma, J., Chang, G., Huang, J., Yang, Y., Wang, H., Liu, M., Xu, Y., Liang, H., Yu, J., Cai, Y. & 45 others, , 2022, In: Nature Plants. 8, 4, p. 389-401 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Australian dingo is an early offshoot of modern breed dogs
Field, M. A., Yadav, S., Dudchenko, O., Esvaran, M., Rosen, B. D., Skvortsova, K., Edwards, R. J., Keilwagen, J., Cochran, B. J., Manandhar, B., Bustamante, S., Rasmussen, J. A., Melvin, R. G., Chernoff, B., Omer, A., Colaric, Z., Chan, E. K. F., Minoche, A. E., Smith, T. P. L., Gilbert, M. T. P. & 5 others, , 2022, In: Science Advances. 8, 16, 14 p., eabm5944.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Behaviour of Short Linear Motifs in the DREB2A Transcription Factor and the Effect of Molecular Context
Theisen, Frederik Friis, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 160 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The Clinical Application of Next Generation Sequencing Technology in Newborn Screening and Pharmacogenetics
Jian, M., 2022, Department of Biology, Faculty of Science, University of Copenhagen. 131 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The Earth BioGenome Project 2020: Starting the clock
Lewin, H. A., Richards, S., Aiden, E. L., Allende, M. L., Archibald, J. M., Bálint, M., Barker, K. B., Baumgartner, B., Belov, K., Bertorelle, G., Blaxter, M. L., Cai, J., Caperello, N. D., Carlson, K., Castilla-Rubio, J. C., Chaw, S. M., Chen, L., Childers, A. K., Coddington, J. A., Conde, D. A. & 65 others, , 2022, In: PNAS. 119, 4, 7 p., e2115635118.Research output: Contribution to journal › Review › Research › peer-review
- Published
The Efficacy of Faecal Microbiota Transplant and Rectal Bacteriotherapy in Patients with Recurrent Clostridioides difficile Infection: A Retrospective Cohort Study.
Svensson, C. K., Cold, F., Ribberholt, I., Zangenberg, M., Mirsepasi-Lauridsen, H. C., Petersen, Andreas Munk & Helms, Morten, 2022, In: Cells. 11, 20, 12 p., 3272.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The FASTQ+ format and PISA
Shi, Quan, Liu, S., Kristiansen, Karsten & Liu, L., 2022, In: Bioinformatics. 38, 19, p. 4639-4642 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The First Genome of the Balearic Shearwater (Puffinus mauretanicus) Provides a Valuable Resource for Conservation Genomics and Sheds Light on Adaptation to a Pelagic lifestyle
Cuevas-Caballé, C., Ferrer Obiol, J., Vizueta Moraga, Joel, Genovart, M., Gonzalez-Solís, J., Riutort, M. & Rozas, J., 2022, In: Genome Biology and Evolution. 14, 5, 14 p., evac067.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
Afgan, E., Nekrutenko, A., Grüning, B. A., Blankenberg, D., Goecks, J., Schatz, M. C., Ostrovsky, A. E., Mahmoud, A., Lonie, A. J., Syme, A., Fouilloux, A., Bretaudeau, A., Nekrutenko, A., Kumar, A., Eschenlauer, A. C., Desanto, A. D., Guerler, A., Serrano-Solano, B., Batut, B., Grüning, B. A. & 85 others, , 2022, In: Nucleic Acids Research. 50, W1, p. W345-W351 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Gut Microbiota of Healthy and Flavobacterium psychrophilum-Infected Rainbow Trout Fry Is Shaped by Antibiotics and Phage Therapies
Donati, V. L., Madsen, L., Middelboe, Mathias, Strube, M. L. & Dalsgaard, I., 2022, In: Frontiers in Microbiology. 13, 21 p., 771296.Research output: Contribution to journal › Journal article › Research › peer-review
Most downloads
-
32533
downloads
Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
Research output: Contribution to conference › Conference abstract for conference › Research
Published -
8995
downloads
Long-term survival of dinoflagellate cysts in anoxic marine sediments.
Research output: Contribution to conference › Conference abstract for conference › Research
Published -
7501
downloads
Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research
Published
Latest publications
Recommendations for the Organisational Framework for Excellence at UCPH
Research output: Book/Report › Report › Commissioned › peer-review
Fremme af spontan vegetation efter gran
Research output: Other contribution › Net publication - Internet publication › Communication
A region of suppressed recombination misleads neoavian phylogenomics
Research output: Contribution to journal › Journal article › Research › peer-review