Department of Biology

Genetic loci and prioritization of genes for kidney function decline derived from a meta-analysis of 62 longitudinal genome-wide association studies

Gorski, M., Rasheed, H., Teumer, A., Thomas, L. F., Graham, S. E., Sveinbjornsson, G., Winkler, T. W., Günther, F., Stark, K. J., Chai, J-F., Tayo, B. O., Wuttke, M., Li, Y., Tin, A., Ahluwalia, T. S., Ärnlöv, J., Åsvold, B. O., Bakker, S. J. L., Banas, B., Bansal, N. & 29 others, Biggs, M. L., Biino, G., Böhnke, M., Boerwinkle, E., Bottinger, E. P., Brenner, H., Brumpton, B., Carroll, R. J., Chaker, L., Chalmers, J., Chee, M., Chee, M., Cheng, C., Chu, A. Y., Ciullo, M., Cocca, M., Cook, J. P., Coresh, J., Cusi, D., de Borst, M. H., Degenhardt, F., Eckardt, K., Endlich, K., Evans, M. K., Feitosa, M. F., Franke, A., Freitag-Wolf, S., Rossing, Peter & LifeLines Cohort Study, L. C. S., 2022, In: Kidney International. 102, 3, p. 624-639 16 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Genetics of early-life head circumference and genetic correlations with neurological, psychiatric and cognitive outcomes

Vogelezang, S., Bradfield, J. P., Early Growth Genetics Consortium, Ahluwalia, T. V. S., Liu, X., Schnurr, T. M., Frithioff-Bøjsøe, C., Bønnelykke, K., Lind, M. V., Lauritzen, L., Michaelsen, K. F., Lund, M. A. V., Melbye, M., Morgen, C. S., Pedersen, O. B., Holm, J-C., Grarup, N., Hansen, T., Nohr, E. A., Bisgaard, H. & 3 others, Grant, S. F. A., Felix, J. F. & Jaddoe, V. W. V., 2022, In: BMC Medical Genomics. 15, 16 p., 124.

Research output: Contribution to journal › Journal article › Research › peer-review

Genome binning of viral entities from bulk metagenomics data

Johansen, Joachim, Plichta, D. R., Nissen, J. N., Jespersen, Marie Louise, Shah, S. A., Deng, Ling, Stokholm, Jakob, Bisgaard, H., Nielsen, Dennis Sandris, Sørensen, Søren Johannes & Rasmussen, Simon, 2022, In: Nature Communications. 13, 12 p., 965.

Research output: Contribution to journal › Journal article › Research › peer-review

Genome-wide association study of Klebsiella pneumoniae identifies variations linked to carbapenems resistance

Pei, N., Sun, W., He, J., Li, Y., Chen, X., Liang, T., Kristiansen, Karsten, Liu, W. & Li, J., 2022, In: Frontiers in Microbiology. 13, 11 p., 997769.

Research output: Contribution to journal › Journal article › Research › peer-review

Genome-wide study of early and severe childhood asthma identifies interaction between CDHR3 and GSDMB

Eliasen, A. U., Pedersen, C. E. T., Rasmussen, M. A., Wang, N., Soverini, M., Fritz, A., Stokholm, J., Chawes, B. L., Morin, A., Bork-Jensen, J., Grarup, N., Pedersen, O., Hansen, T., Linneberg, A., Mortensen, P. B., Hougaard, D. M., Bybjerg-Grauholm, J., Bækvad-Hansen, M., Mors, O., Nordentoft, M. & 14 others, Børglum, A. D., Werge, Thomas, Agerbo, E., Söderhall, C., Altman, M. C., Thysen, A. H., McKennan, C. G., Brix, Susanne, Gern, J. E., Ober, C., Ahluwalia, Tarun Veer Singh, Bisgaard, H., Pedersen, A. G. & Bønnelykke, Klaus, 2022, In: Journal of Allergy and Clinical Immunology. 150, 3, p. 622-630

Research output: Contribution to journal › Journal article › Research › peer-review

Genomes shed light on the evolution of Begonia, a mega-diverse genus

Li, L., Chen, X., Fang, D., Dong, S., Guo, X., Li, N., Campos-Dominguez, L., Wang, W., Liu, Y., Lang, X., Peng, Y., Tian, D., Thomas, D. C., Mu, W., Liu, M., Wu, C., Yang, T., Zhang, S., Yang, L., Yang, J. & 23 others, Liu, Z., Zhang, L., Zhang, X., Chen, F., Jiao, Y., Guo, Y., Hughes, M., Wang, W., Liu, X., Zhong, C., Li, A., Sahu, S. K., Yang, H., Wu, E., Sharbrough, J., Lisby, Michael, Liu, X., Xu, X., Soltis, D. E., Van de Peer, Y., Kidner, C., Zhang, S. & Liu, Huan, 2022, In: New Phytologist. 234, 1, p. 295-310 16 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma

Xu, L., Ma, Y., Fang, Chao, Peng, Z., Gao, F., Moll, J. M., Qin, S., Yu, Q., Hou, Y., Kristiansen, Karsten, Fang, W., Brix, S. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 11 p., 953884.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda

Gui, F., Lan, T., Zhao, Y., Guo, W., Dong, Y., Fang, D., Liu, H., Li, H., Wang, H., Hao, R., Cheng, X., Li, Y., Yang, P., Sahu, S. K., Chen, Y., Cheng, L., He, S., Liu, P., Fan, G., Lu, H. & 24 others, Hu, G., Dong, W., Chen, B., Jiang, Y., Zhang, Y., Xu, H., Lin, F., Slippers, B., Postma, A., Jackson, M., Abate, B. A., Tesfaye, K., Demie, A. L., Bayeleygne, M. D., Degefu, D. T., Chen, F., Kuria, P. K., Kinyua, Z. M., Liu, T., Yang, H., Huang, F., Liu, X., Sheng, J. & Kang, L., 2022, In: Protein & Cell (Print). 13, 7, p. 513-531 19 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomic evidence refutes the hypothesis that the Bornean banteng is a distinct species

Sun, Xin, Ciucani, M. M., Rasmussen, Jacob Agerbo, Gilbert, M Thomas P & Sinding, Mikkel Holger Strander, 2022, In: BMC Ecology and Evolution. 22, 4 p., 110.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomic insights into the secondary aquatic transition of penguins

Cole, T. L., Zhou, C., Fang, M., Pan, H., Ksepka, D. T., Fiddaman, S. R., Emerling, C. A., Thomas, D. B., Bi, X., Fang, Q., Ellegaard, M. R., Feng, S., Smith, A. L., Heath, T. A., Tennyson, A. J. D., Borboroglu, P. G., Wood, J. R., Hadden, P. W., Grosser, S., Bost, C. A. & 20 others, Cherel, Y., Mattern, T., Hart, T., Sinding, Mikkel Holger Strander, Shepherd, L. D., Phillips, R. A., Quillfeldt, P., Masello, J. F., Bouzat, J. L., Ryan, P. G., Thompson, D. R., Ellenberg, U., Dann, P., Miller, G., Dee Boersma, P., Zhao, R., Gilbert, M Thomas P, Yang, H., Zhang, D. & KU, thw266, 2022, In: Nature Communications. 13, 13 p., 3912.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomic surveillance of SARS-COV-2 reveals diverse circulating variant lineages in Nairobi and Kiambu Counties, Kenya

Kuja, J. O., Kanoi, B. N., Balboa, Renzo Fidel Ferdinando, Shiluli, C., Maina, M., Waweru, H., Gathii, K., Mungai, M., Masika, M., Anzala, O., Mwau, M., Clark, T. G., Waitumbi, J. & Gitaka, J., 2022, In: BMC Genomics. 23, 1, 8 p., 627.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomic variation in baboons from central Mozambique unveils complex evolutionary relationships with other Papio species

Santander, C., Molinaro, L., Mutti, G., Martínez, F. I., Mathe, J., da Silva, M. J. F., Caldon, M., Oteo-Garcia, G., Aldeias, V., Archer, W., Bamford, M., Biro, D., Bobe, R., Braun, D. R., Hammond, P., Lüdecke, T., Pinto, M. J., Meira Paulo, L., Stalmans, M., Regala, F. T. & 6 others, Bertolini, F., Moltke, Ida, Raveane, A., Pagani, L., Carvalho, S. & Capelli, C., 2022, In: BMC Ecology and Evolution. 22, 16 p., 44.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera

Tandon, K., Ricci, F., Costa, J., Medina, M., Kühl, Michael, Blackall, L. L. & Verbruggen, H., 2022, In: GigaScience. 12, 12 p., giac127.

Research output: Contribution to journal › Journal article › Research › peer-review

Genomics, Transcriptomics, and Proteomics of SSV1 and Related Fusellovirus: A Minireview

Aulitto, M., Martinez Alvarez, Laura, Fusco, S., She, Q., Bartolucci, S., Peng, Xu & Contursi, P., 2022, In: Viruses. 14, 10, 18 p., 2082.

Research output: Contribution to journal › Review › Research › peer-review

Germin like protein genes exhibit modular expression during salt and drought stress in elite rice cultivars

Anum, J., O'Shea, Charlotte, Hyder, M. Z., Farrukh, S., Skriver, Karen, Malik, S. I. & Yasmin, T., 2022, In: Molecular Biology Reports. 49, 1, p. 293-302 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Global mapping reveals increase in lacustrine algal blooms over the past decade

Hou, X., Feng, L., Dai, Y., Hu, C., Gibson, L., Tang, Jing, Lee, Z., Wang, Y., Cai, X., Liu, J., Zheng, Y. & Zheng, C., 2022, In: Nature Geoscience. 15, 2, p. 130-134 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Goat kid recognition of their mothers' calls is not impacted by changes in fundamental frequency or formants

Perroux, T. A., McElligott, A. G. & Briefer, Elodie, 2022, In: Journal of Zoology. 318, 4, 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Grand Challenges in Coevolution

Medina, M., Baker, D. M., Baltrus, D. A., Bennett, G. M., Cardini, U., Correa, A. M. S., Degnan, S. M., Christa, G., Kim, E., Li, J., Nash, David Richard, Marzinelli, E., Nishiguchi, M., Prada, C., Roth, M. S., Saha, M., Smith, C. I., Theis, K. R. & Zaneveld, J., 2022, In: Frontiers in Ecology and Evolution. 9, 11 p., 618251.

Research output: Contribution to journal › Journal article › Research › peer-review

Green fluorescent protein-like pigments optimise the internal light environment in symbiotic reef-building corals

Bollati, Elena, Lyndby, N. H., D’angelo, C., Kühl, Michael, Wiedenmann, J. & Wangpraseurt, D., 2022, In: eLife. 11, 24 p., e73521.

Research output: Contribution to journal › Journal article › Research › peer-review

Greenland Ice Sheet Surfaces Colonized by Microbial Communities Emit Volatile Organic Compounds

Doting, E. L., Davie-Martin, Cleo Lisa, Johansen, A., Benning, L. G., Tranter, M., Rinnan, Riikka & Anesio, A. M., 2022, In: Frontiers in Microbiology. 13, 14 p., 886293.

Research output: Contribution to journal › Journal article › Research › peer-review

Grey wolf genomic history reveals a dual ancestry of dogs

Bergström, A., Stanton, D. W. G., Taron, U. H., Frantz, L., Sinding, M. H. S., Ersmark, E., Pfrengle, S., Cassatt-Johnstone, M., Lebrasseur, O., Girdland-Flink, L., Fernandes, D. M., Ollivier, M., Speidel, L., Gopalakrishnan, S., Westbury, M. V., Ramos-Madrigal, J., Feuerborn, T. R., Reiter, E., Gretzinger, J., Münzel, S. C. & 61 others, Swali, P., Conard, N. J., Carøe, C., Haile, James Seymour, Linderholm, A., Androsov, S., Barnes, I., Baumann, C., Benecke, N., Bocherens, H., Brace, S., Carden, R. F., Drucker, D. G., Fedorov, S., Gasparik, M., Germonpré, M., Grigoriev, S., Groves, P., Hertwig, S. T., Ivanova, V. V., Janssens, L., Jennings, R. P., Kasparov, A. K., Kirillova, I. V., Kurmaniyazov, I., Kuzmin, Y. V., Kosintsev, P. A., Lázničková-Galetová, M., Leduc, C., Nikolskiy, P., Nussbaumer, M., O’Drisceoil, C., Orlando, L., Outram, A., Pavlova, E. Y., Perri, A. R., Pilot, M., Pitulko, V. V., Plotnikov, V. V., Protopopov, A. V., Rehazek, A., Sablin, M., Seguin-Orlando, A., Storå, J., Verjux, C., Zaibert, V. F., Zazula, G., Crombé, P., Hansen, Anders Johannes, Willerslev, Eske, Leonard, J. A., Götherström, A., Pinhasi, R., Schuenemann, V. J., Hofreiter, M., Gilbert, M Thomas P, Shapiro, B., Larson, G., Krause, J., Dalén, L. & Skoglund, P., 2022, In: Nature. 607, 7918, p. 313-320

Research output: Contribution to journal › Journal article › Research › peer-review

Guidelines for evaluating the conservation value of African lion (Panthera leo) translocations

Becker, M. S., Almeida, J., Begg, C., Bertola, L., Breitenmoser, C., Breitenmoser, U., Coals, P., Funston, P., Gaylard, A., Groom, R., Henschel, P., Ikanda, D., Jorge, A., Kruger, J., Lindsey, P., Maimbo, H., Mandisodza-Chikerema, R., Maude, G., Mbizah, M., Miller, S. M. & 17 others, Mudongo, E., Mwape, H., Mweetwa, T., Naude, V., Nyirenda, V. R., Parker, A., Parker, D., Reid, C., Robson, A., Sayer, E., Selier, S. J., Sichande, M., Simukonda, C., Uiseb, K., Williams, V. L., Zimba, D. & Hunter, L., 2022, In: Frontiers in Conservation Science. 3, 13 p., 963961.

Research output: Contribution to journal › Journal article › Research › peer-review

H3K9 dimethylation safeguards cancer cells against activation of the interferon pathway

Hansen, A. M., Ge, Y., Schuster, Mikkel Bruhn, Pundhir, Sachin, Jakobsen, J. S., Kalvisa, A., Tapia, Marta Cecylia, Gordon, Sandra, Ambri, F., Bagger, F. O., Pandey, D., Helin, K. & Porse, Bo Torben, 2022, In: Science Advances. 8, 11, eabf8627.

Research output: Contribution to journal › Journal article › Research › peer-review

Hair mineral levels as indicator of wildlife demographics? a pilot study of muskoxen

Mosbacher, J. B., Desforges, J., Michelsen, Anders, V. Hansson, S., Stelvig, M., Eulaers, I., Sonne, C., Dietz, R., Jenssen, B. M., Ciesielski, T. M., Lierhagen, S., Flaten, T. P., Le Roux, G., Aggerbeck, M. R. & Schmidt, N. M., 2022, In: Polar Research. 41, 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Haplotype and population structure inference using neural networks in whole-genome sequencing data

Meisner, Jonas & Albrechtsen, Anders, 2022, In: Genome Research. 32, 8, p. 1542-1552 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Heat waves affect prey and predators differently via developmental plasticity: who may benefit most from global warming?

Tscholl, T., Nachman, Gøsta Støger, Spangl, B. & Walzer, A., 2022, In: Pest Management Science. 78, 3, p. 1099-1108 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Herpetofaunal diversity changes with climate: evidence from the Quaternary of McEachern’s Deathtrap Cave, southeastern Australia

Ramm, T., Thorn, K. M., Hipsley, Christy Anna, Müller, J., Hocknull, S. & Melville, J., 2022, In: Journal of Vertebrate Paleontology. 41, 5, 23 p., e2009844.

Research output: Contribution to journal › Journal article › Research › peer-review

High exposure of global tree diversity to human pressure

Guo, W-Y., Serra-Diaz, J. M., Schrodt, F., Eiserhardt, W. L., Maitner, B. S., Merow, C., Violle, C., Anand, M., Belluau, M., Bruun, H. H., Byun, C., Catford, J. A., Cerabolini, B. E. L., Chacón-Madrigal, E., Ciccarelli, D., Cornelissen, J. H. C., Dang-Le, A. T., de Frutos, A., Dias, A. S., Giroldo, A. B. & 37 others, Guo, K., Gutiérrez, A. G., Hattingh, W., He, T., Hietz, P., Hough-Snee, N., Jansen, S., Kattge, J., Klein, T., Komac, B., Kraft, N. J. B., Kramer, K., Lavorel, S., Lusk, C. H., Martin, A. R., Mencuccini, M., Michaletz, S. T., Minden, V., Mori, A. S., Niinemets, Ü., Onoda, Y., Peñuelas, J., Pillar, V. D., Pisek, J., Robroek, B. J. M., Schamp, B., Slot, M., Sosinski, Ê. E., Soudzilovskaia, N. A., Thiffault, N., van Bodegom, P., van der Plas, F., Wright, I. J., Xu, W., Zheng, J., Enquist, B. J. & Svenning, J., 2022, In: PNAS. 119, 25, 11 p., e2026733119.

Research output: Contribution to journal › Journal article › Research › peer-review

High nitrogen-fixing rates associated with ground-covering mosses in a tropical mountain cloud forest will decrease drastically in a future climate

Permin, Aya Tora Foged, Horwath, A. B., Metcalfe, D. B., Priemé, Anders & Rousk, Kathrin, 2022, In: Functional Ecology. 36, 7, p. 1772-1781 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

High-speed chases along the seafloor put Bryde's whales at risk of entanglement

Segre, P. S., drf168, drf168, Kahane-Rapport, S. R., Gough, W. T., Meÿer, M. A., Lombard, A. T., Goldbogen, J. A. & Penry, G. S., 2022, In: Conservation Science and Practice. 4, 5, 9 p., e12646.

Research output: Contribution to journal › Journal article › Research › peer-review

Horizontal Gene Transfer of an IncP1 Plasmid to Soil Bacterial Community Introduced by Escherichia coli through Manure Amendment in Soil Microcosms

Macedo, G., Olesen, Asmus Kalckar, Maccario, Lorrie, Leal, L. H., v. d. Maas, P., Heederik, D., Mevius, D., Sørensen, Søren Johannes & Schmitt, H., 2022, In: Environmental Science & Technology. 56, 16, p. 11398-11408 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

How phosphorylation impacts intrinsically disordered proteins and their function

Newcombe, Estella Anne, Delaforge, Elise, Hartmann-Petersen, Rasmus, Skriver, Karen & Kragelund, Birthe Brandt, 2022, In: Essays in Biochemistry. 66, 7, p. 901-913 13 p.

Research output: Contribution to journal › Review › Research › peer-review

Human sperm cells can form paracetamol metabolite AM404 that directly interferes with sperm calcium signalling and function through a CatSper-dependent mechanism

Rehfeld, Anders Aagaard, Frederiksen, H., Rasmussen, R. H., David, A., Chaker, J., Nielsen, B. S., Nielsen, J. E., Juul, Anders, Skakkebæk, Niels Erik & Kristensen, D. M., 2022, In: Human reproduction (Oxford, England). 37, 5, p. 922-935 14 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Hypersalinity effects on O₂ flux across the diffusive boundary layer of leaves in the tropical seagrass Thalassia testudinum

Koch, M. S., Johnson, C. R., Travis, L., Pedersen, Ole & Madden, C. J., 2022, In: Journal of Experimental Marine Biology and Ecology. 555, 8 p., 151780.

Research output: Contribution to journal › Journal article › Research › peer-review

Hypothesis: Metformin is a potential reproductive toxicant

Tavlo, M., Skakkebæk, Niels Erik, Mathiesen, Elisabeth, Kristensen, D. M., Kjær, Kurt H., Andersson, A. & Lindahl-Jacobsen, R., 2022, In: Frontiers in Endocrinology. 13, 8 p., 1000872.

Research output: Contribution to journal › Journal article › Research › peer-review

Hypoxia as a physiological cue and pathological stress for coral larvae

Alderdice, R., Pernice, M., Cárdenas, A., Hughes, D. J., Harrison, P. L., Boulotte, N., Chartrand, K., Kühl, Michael, Suggett, D. J. & Voolstra, C. R., 2022, In: Molecular Ecology. 31, 2, p. 571-587 17 p.

Research output: Contribution to journal › Journal article › Research › peer-review

IL-2 is inactivated by the acidic pH environment of tumors enabling engineering of a pH-selective mutein

Gaggero, S., Martinez-Fabregas, J., Cozzani, A., Fyfe, P. K., Leprohon, M., Yang, J., Thomasen, F. E., Winkelmann, H., Magnez, R., Conti, A. G., Wilmes, S., Pohler, E., van Gijsel Bonnello, M., Thuru, X., Quesnel, B., Soncin, F., Piehler, J., Lindorff-Larsen, K., Roychoudhuri, R., Moraga, I. & 1 others, Mitra, S., 2022, In: Science immunology. 7, 78, 15 p., eade5686.

Research output: Contribution to journal › Journal article › Research › peer-review

Identification of Potential Peptide Marker(s) for Evaluating Pork Meat Freshness via Mass Spectrometry-Based Peptidomics during Storage under Different Temperatures

Wei, Z., Dai, C., Bassey, A. P., Tang, C., Han, Y., Wang, Chong & Zhou, G., 2022, In: Foods. 11, 8, 14 p., 1144.

Research output: Contribution to journal › Journal article › Research › peer-review

Immersive virtual reality in STEM: is IVR an effective learning medium and does adding self-explanation after a lesson improve learning outcomes?

Elme, L., Jørgensen, M. L. M., Dandanell, Gert, Mottelson, A. & Makransky, Guido, 2022, In: Educational Technology Research and Development. 70, 5, p. 1601-1626 26 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Immune modulatory effects of progesterone on oxLDL-induced trained immunity in monocytes

Groh, L. A., Verel, D. E., van der Heijden, C. D. C. C., Matzaraki, V., Moorlag, S. J. C. F. M., de Bree, L. C., Koeken, V. A. C. M., Mourits, V. P., Keating, S. T., van Puffelen, J. H., Joosten, L. A. B., Netea, M. G. & Riksen, N. P., 2022, In: Journal of Leukocyte Biology. 112, 2, p. 279-288 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Impact of intensive lifestyle intervention on gut microbiota composition in type 2 diabetes: a post-hoc analysis of a randomized clinical trial

Wei, S., Brejnrod, A. D., Trivedi, Urvish, Mortensen, M. S., Johansen, M. Y., Karstoft, Kristian, Vaag, A. A., Ried-Larsen, M. & Sørensen, Søren Johannes, 2022, In: Gut Microbes. 14, 1, 15 p., 2005407.

Research output: Contribution to journal › Journal article › Research › peer-review

Impact of model assumptions on the inference of the evolution of ectomycorrhizal symbiosis in fungi

Sheikh, Sanea, Khan, F. K., Bahram, M. & Ryberg, M., 2022, In: Scientific Reports. 12, 10 p., 22043.

Research output: Contribution to journal › Journal article › Research › peer-review

Impact of the COVID-19 Pandemic on Primate Research and Conservation

Reuter, K. E., Andriantsaralaza, S., Hansen, Malene Friis, Lafleur, M., Jerusalinsky, L., Louis, E. E., Ratzimbazafy, J., Williamson, E. A. & Mittermeier, R. A., 2022, In: Animals. 12, 9, 18 p., 1214.

Research output: Contribution to journal › Journal article › Research › peer-review

Impacts of elevation on plant traits and volatile organic compound emissions in deciduous tundra shrubs

Simin, Tihomir, Davie-Martin, Cleo Lisa, Petersen, J., Høye, T. T. & Rinnan, Riikka, 2022, In: Science of the Total Environment. 837, 13 p., 155783.

Research output: Contribution to journal › Journal article › Research › peer-review

Impacts of inorganic nutrients on the physiology of a mixoplanktonic ciliate and its cryptophyte prey

Maselli, Maira, Van de Waal, D. B. & Hansen, Per Juel, 2022, In: Oecologia. 199, 1, p. 41-52 12 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Implicating genes, pleiotropy, and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis

Kanoni, S., Graham, S. E., Wang, Y., Surakka, I., Ramdas, S., Zhu, X., Clarke, S. L., Bhatti, K. F., Vedantam, S., Winkler, T. W., Locke, A. E., Marouli, E., Zajac, G. J. M., Wu, K. H. H., Ntalla, I., Hui, Q., Klarin, D., Hilliard, A. T., Wang, Z., Xue, C. & 519 others, Thorleifsson, G., Helgadottir, A., Gudbjartsson, D. F., Holm, H., Olafsson, I., Hwang, M. Y., Han, S., Akiyama, M., Sakaue, S., Terao, C., Kanai, M., Zhou, W., Brumpton, B. M., Rasheed, H., Havulinna, A. S., Veturi, Y., Pacheco, J. A., Rosenthal, E. A., Lingren, T., Feng, Q. P., Kullo, I. J., Narita, A., Takayama, J., Martin, H. C., Hunt, K. A., Trivedi, B., Haessler, J., Giulianini, F., Bradford, Y., Miller, J. E., Campbell, A., Lin, K., Millwood, I. Y., Rasheed, A., Hindy, G., Faul, J. D., Zhao, W., Weir, D. R., Turman, C., Huang, H., Graff, M., Choudhury, A., Sengupta, D., Mahajan, A., Brown, M. R., Zhang, W., Yu, K., Schmidt, E. M., Pandit, A., Gustafsson, S., Yin, X., Luan, J., Zhao, J. H., Matsuda, F., Jang, H. M., Yoon, K., Medina-Gomez, C., Pitsillides, A., Hottenga, J. J., Wood, A. R., Ji, Y., Gao, Z., Haworth, S., Yousri, N. A., Mitchell, R. E., Chai, J. F., Aadahl, Mette, Bjerregaard, A. A., Yao, J., Manichaikul, A., Hwu, C. M., Hung, Y. J., Warren, H. R., Ramirez, J., Bork-Jensen, J., Kårhus, L. L., Goel, A., Sabater-Lleal, M., Noordam, R., Mauro, P., Matteo, F., McDaid, A. F., Marques-Vidal, P., Wielscher, M., Trompet, S., Sattar, N., Møllehave, L. T., Munz, M., Zeng, L., Huang, J., Yang, B., Poveda, A., Kurbasic, A., Lamina, C., Forer, L., Scholz, M., Galesloot, T. E., Bradfield, J. P., Ruotsalainen, S. E., Daw, E., Zmuda, J. M., Mitchell, J. S., Fuchsberger, C., Christensen, H., Brody, J. A., Vazquez-Moreno, M., Feitosa, M. F., Wojczynski, M. K., Wang, Z., Preuss, M. H., Mangino, M., Christofidou, P., Verweij, N., Benjamins, J. W., Engmann, J., Tsao, N. L., Verma, A., Slieker, R. C., Lo, K. S., Zilhao, N. R., Le, P., Kleber, M. E., Delgado, G. E., Huo, S., Ikeda, D. D., Iha, H., Yang, J., Liu, J., Demirkan, A., Leonard, H. L., Marten, J., Frank, M., Schmidt, B., Smyth, L. J., Cañadas-Garre, M., Wang, C., Nakatochi, M., Wong, A., Hutri-Kähönen, N., Sim, X., Xia, R., Huerta-Chagoya, A., Fernandez-Lopez, J. C., Lyssenko, V., Nongmaithem, S. S., Bayyana, S., Stringham, H. M., Irvin, M. R., Oldmeadow, C., Kim, H. N., Ryu, S., Timmers, P. R. H. J., Arbeeva, L., Dorajoo, R., Lange, L. A., Prasad, G., Lorés-Motta, L., Pauper, M., Long, J., Li, X., Theusch, E., Takeuchi, F., Spracklen, C. N., Loukola, A., Bollepalli, S., Warner, S. C., Wang, Y. X., Wei, W. B., Nutile, T., Ruggiero, D., Sung, Y. J., Chen, S., Liu, F., Yang, J., Kentistou, K. A., Banas, B., Nardone, G. G., Meidtner, K., Bielak, L. F., Smith, J. A., Hebbar, P., Farmaki, A. E., Hofer, E., Lin, M., Concas, M. P., Vaccargiu, S., van der Most, P. J., Pitkänen, N., Cade, B. E., van der Laan, S. W., Chitrala, K. N., Weiss, S., Bentley, A. R., Doumatey, A. P., Adeyemo, A. A., Lee, J. Y., Petersen, E. R. B., Nielsen, A. A., Choi, H. S., Nethander, M., Freitag-Wolf, S., Southam, L., Rayner, N. W., Wang, C. A., Lin, S. Y., Wang, J. S., Couture, C., Lyytikäinen, L. P., Nikus, K., Cuellar-Partida, G., Vestergaard, H., Hidalgo, B., Giannakopoulou, O., Cai, Q., Obura, M. O., van Setten, J., Li, X., Liang, J., Tang, H., Terzikhan, N., Shin, J. H., Jackson, R. D., Reiner, A. P., Martin, L. W., Chen, Z., Li, L., Kawaguchi, T., Thiery, J., Bis, J. C., Launer, L. J., Li, H., Nalls, M. A., Raitakari, O. T., Ichihara, S., Wild, S. H., Nelson, C. P., Campbell, H., Jäger, S., Nabika, T., Al-Mulla, F., Niinikoski, H., Braund, P. S., Kolcic, I., Kovacs, P., Giardoglou, T., Katsuya, T., de Kleijn, D., de Borst, G. J., Kim, E. K., Adams, H. H. H., Ikram, M. A., Zhu, X., Asselbergs, F. W., Kraaijeveld, A. O., Beulens, J. W. J., Shu, X. O., Rallidis, L. S., Pedersen, Oluf Borbye, Hansen, Torben, Mitchell, P., Hewitt, A. W., Kähönen, M., Pérusse, L., Bouchard, C., Tönjes, A., Chen, Y. D. I., Pennell, C. E., Mori, T. A., Lieb, W., Franke, A., Ohlsson, C., Mellström, D., Cho, Y. S., Lee, H., Yuan, J. M., Koh, W. P., Rhee, S. Y., Woo, J. T., Heid, I. M., Stark, K. J., Zimmermann, M. E., Völzke, H., Homuth, G., Evans, M. K., Zonderman, A. B., Polasek, O., Pasterkamp, G., Hoefer, I. E., Redline, S., Pahkala, K., Oldehinkel, A. J., Snieder, H., Biino, G., Schmidt, R., Schmidt, H., Bandinelli, S., Dedoussis, G., Thanaraj, T. A., Kardia, S. L. R., Peyser, P. A., Kato, N., Schulze, M. B., Girotto, G., Böger, C. A., Jung, B., Joshi, P. K., Bennett, D. A., De Jager, P. L., Lu, X., Mamakou, V., Brown, M., Caulfield, M. J., Munroe, P. B., Guo, X., Ciullo, M., Jonas, J. B., Samani, N. J., Kaprio, J., Pajukanta, P., Tusié-Luna, T., Aguilar-Salinas, C. A., Adair, L. S., Bechayda, S. A., de Silva, H. J., Wickremasinghe, A. R., Krauss, R. M., Wu, J. Y., Zheng, W., Hollander, A. I., Bharadwaj, D., Correa, A., Wilson, J. G., Lind, L., Heng, C. K., Nelson, A. E., Golightly, Y. M., Wilson, J. F., Penninx, B., Kim, H. L., Attia, J., Scott, R. J., Rao, D. C., Arnett, D. K., Hunt, S. C., Walker, M., Koistinen, H. A., Chandak, G. R., Mercader, J. M., Costanzo, M. C., Jang, D., Burtt, N. P., Villalpando, C. G., Orozco, L., Fornage, M., Tai, E., van Dam, R. M., Lehtimäki, T., Chaturvedi, N., Yokota, M., Liu, J., Reilly, D. F., McKnight, A. J., Kee, F., Jöckel, K. H., McCarthy, M. I., Palmer, C. N. A., Vitart, V., Hayward, C., Simonsick, E., van Duijn, C. M., Jin, Z. B., Qu, J., Hishigaki, H., Lin, X., März, W., Gudnason, V., Tardif, J. C., Lettre, G., Hart, L. M. T., Elders, P. J. M., Damrauer, S. M., Kumari, M., Kivimaki, M., van der Harst, P., Spector, T. D., Loos, Ruth, Province, M. A., Parra, E. J., Cruz, M., Psaty, B. M., Brandslund, I., Pramstaller, P. P., Rotimi, C. N., Christensen, K., Ripatti, S., Widén, E., Hakonarson, H., Grant, S. F. A., Kiemeney, L. A. L. M., de Graaf, J., Loeffler, M., Kronenberg, F., Gu, D., Erdmann, J., Schunkert, H., Franks, P. W., Linneberg, Allan René, Jukema, J. W., Khera, A. V., Männikkö, M., Jarvelin, M. R., Kutalik, Z., Francesco, C., Mook-Kanamori, D. O., van Dijk, K. W., Watkins, H., Strachan, D. P., Grarup, Niels, Sever, P., Poulter, N., Chuang, L. M., Rotter, J. I., Dantoft, T. M., Karpe, F., Neville, M. J., Timpson, N. J., Cheng, C. Y., Wong, T. Y., Khor, C. C., Li, H., Sabanayagam, C., Peters, A., Gieger, C., Hattersley, A. T., Pedersen, N. L., Magnusson, P. K. E., Boomsma, D. I., Willemsen, A. H. M., Cupples, L., van Meurs, J. B. J., Ghanbari, M., Gordon-Larsen, P., Huang, W., Kim, Y. J., Tabara, Y., Wareham, N. J., Langenberg, C., Zeggini, E., Kuusisto, J., Laakso, M., Ingelsson, E., Abecasis, G., Chambers, J. C., Kooner, J. S., de Vries, P. S., Morrison, A. C., Hazelhurst, S., Ramsay, M., North, K. E., Daviglus, M., Kraft, P., Martin, N. G., Whitfield, J. B., Abbas, S., Saleheen, D., Walters, R. G., Holmes, M. V., Black, C., Smith, B. H., Baras, A., Justice, A. E., Buring, J. E., Ridker, P. M., Chasman, D. I., Kooperberg, C., Tamiya, G., Yamamoto, M., van Heel, D. A., Trembath, R. C., Wei, W. Q., Jarvik, G. P., Namjou, B., Hayes, M. G., Ritchie, M. D., Jousilahti, P., Salomaa, V., Hveem, K., Åsvold, B. O., Kubo, M., Kamatani, Y., Okada, Y., Murakami, Y., Kim, B. J., Thorsteinsdottir, U., Stefansson, K., Zhang, J., Chen, Y., Ho, Y. L., Lynch, J. A., Rader, D. J., Tsao, P. S., Chang, K. M., Cho, K., O'Donnell, C. J., Gaziano, J. M., Wilson, P. W. F., Frayling, T. M., Hirschhorn, J. N., Kathiresan, S., Mohlke, K. L., Sun, Y. V., Morris, A. P., Boehnke, M., Brown, C. D., Natarajan, P., Deloukas, P., Willer, C. J., Assimes, T. L. & Peloso, G. M., 2022, In: Genome Biology. 23, 1, 42 p., 268.

Research output: Contribution to journal › Journal article › Research › peer-review

Importance of substrate quality and clay content on microbial extracellular polymeric substances production and aggregate stability in soils

Olagoke, F. K., Bettermann, A., Nguyen, P. T. B., Redmile-Gordon, M., Babin, D., Smalla, K., Nesme, Joseph, Sørensen, Søren Johannes, Kalbitz, K. & Vogel, C., 2022, In: Biology and Fertility of Soils. 58, 4, p. 435-457 23 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Improving Martini 3 for Disordered and Multidomain Proteins

Thomasen, Emil, Pesce, Francesco, Roesgaard, M. A., Tesei, Giulio & Lindorff-Larsen, Kresten, 2022, In: Journal of Chemical Theory and Computation. 18, 4, p. 2033-2041 9 p.

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Improving the framework for assessment of ecological change in the Arctic: A circumpolar synthesis of freshwater biodiversity

Goedkoop, W., Culp, J. M., Christensen, T., Christoffersen, Kirsten Seestern, Fefilova, E., Guðbergsson, G., Lárusson, K. F., Liljaniemi, P., Novichkova, A. A., Ólafsson, J. S., Sandøy, S. & Lento, J., 2022, In: Freshwater Biology. 67, 1, p. 210-223 14 p.

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Inactivation of Target RNA Cleavage of a III-B CRISPR-Cas System Induces Robust Autoimmunity in Saccharolobus islandicus

Zhang, Y., Lin, Jinzhong, Tian, X., Wang, Y., Zhao, R., Wu, C., Wang, X., Zhao, P., Bi, X., Yu, Z., Han, W., Peng, N., Liang, Y. X. & She, Q., 2022, In: International Journal of Molecular Sciences . 23, 15, 16 p., 8515.

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IncHI1A plasmids potentially facilitate horizontal flow of antibiotic resistance genes to pathogens in microbial communities of urban residential sewage

Olesen, Asmus Kalckar, Pinilla Redondo, Rafael, Hansen, Mads Frederik, Russel, J., Dechesne, A., Smets, B. F., Madsen, Jonas Stenløkke, Nesme, Joseph & Sørensen, Søren Johannes, 2022, In: Molecular Ecology. 31, 5, p. 1595-1608

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Incomplete lineage sorting and phenotypic evolution in marsupials

Feng, S., Bai, M., Rivas-González, I., Li, C., Liu, S., Tong, Y., Yang, H., Chen, G., Xie, D., Sears, K. E., Franco, L. M., Gaitan-Espitia, J. D., Nespolo, R. F., Johnson, W. E., Yang, H., Brandies, P. A., Hogg, C. J., Belov, K., Renfree, M. B., Helgen, K. M. & 3 others, Boomsma, Jacobus J., Schierup, M. H. & KU, thw266, 2022, In: Cell. 185, 10, p. 1646-1660.e18

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Increased Above- and Belowground Plant Input Can Both Trigger Microbial Nitrogen Mining in Subarctic Tundra Soils

Hicks, L. C., Yuan, M., Brangarí, A., Rousk, Kathrin & Rousk, J., 2022, In: Ecosystems. 25, 1, p. 105-121 17 p.

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Increasing protein stability by inferring substitution effects from high-throughput experiments

Norrild, R. K., Johansson, Kristoffer Enøe, O'Shea, Charlotte, Morth, J. P., Lindorff-Larsen, Kresten & Winther, Jakob R., 2022, In: Cell Reports Methods. 2, 11, 11 p., 100333.

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Independent and adaptive evolution of phenotypic novelties driven by coral symbiosis in barnacle larvae

Dreyer, N., Tsai, P. C., Olesen, Jørgen, Kolbasov, G. A., Høeg, Jens Thorvald & Chan, B. K. K., 2022, In: Evolution. 76, 1, p. 139-157 19 p.

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Independent evolution of intermediate bill widths in a seabird clade

Masello, J. F., Ryan, P. G., Shepherd, L. D., Quillfeldt, P., Cherel, Y., Tennyson, A. J. D., Alderman, R., Calderón, L., Cole, T. L., Cuthbert, R. J., Dilley, B. J., Massaro, M., Miskelly, C. M., Navarro, J., Phillips, R. A., Weimerskirch, H. & Moodley, Y., 2022, In: Molecular Genetics and Genomics. 297, 1, p. 183-198 16 p.

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Influence of increased nutrient availability on biogenic volatile organic compound (BVOC) emissions and leaf anatomy of subarctic dwarf shrubs under climate warming and increased cloudiness

Ndah, F., Valolahti, H., Schollert, M., Michelsen, Anders, Rinnan, Riikka & Kivimäenpää, M., 2022, In: Annals of Botany. 129, 4, p. 443-455 13 p.

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Influence of sewage sludge stabilization method on microbial community and the abundance of antibiotic resistance genes

Major, N., Jechalke, S., Nesme, Joseph, Goreta Ban, S., Černe, M., Sørensen, Søren Johannes, Ban, D., Grosch, R., Schikora, A. & Schierstaedt, J., 2022, In: Waste Management. 154, p. 126-135 10 p.

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Influences of Shifted Vegetation Phenology on Runoff Across a Hydroclimatic Gradient

Chen, S., Fu, Y. H., Geng, X., Hao, Z., Tang, Jing, Zhang, X., Xu, Z. & Hao, F., 2022, In: Frontiers in Plant Science. 12, 13 p., 802664.

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Initiation of the Primate Genome Project

Wu, D., Qi, X., Yu, L., Li, M., Liu, Z., Yoder, A. D., Roos, C., Hayakawa, T., Rogers, J., Marques-Bonet, T., Su, B., Yao, Y., Zhang, Y. & KU, thw266, 2022, In: Zoological research. 43, 2, p. 147-149 3 p.

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Insights into the Metabolomic Capacity of Podaxis and Isolation of Podaxisterols A-D, Ergosterol Derivatives Carrying Nitrosyl Cyanide-Derived Modifications

Guo, H., Daniel, J. M., Seibel, E., Burkhardt, I., Conlon, B. H., Görls, H., Vassão, D. G., Dickschat, J. S., Poulsen, Michael & Beemelmanns, C., 2022, In: Journal of Natural Products. 85, 9, p. 2159-2167

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Insulin signaling couples growth and early maturation to cholesterol intake in Drosophila

Texada, Michael James, Lassen, Mette, Pedersen, L. H., Koyama, Takashi, Malita, Alina & Rewitz, Kim, 2022, In: Current Biology. 32, 7, p. 1548-1562.e6

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Intake of a Chicken Protein-Based or Soy Protein-Based Diet Differentially Affects Growth Performance, Absorptive Capacity, and Gut Microbiota in Young Rats

Zhao, Fan, Wang, Chong, Song, S., Fang, C., Kristiansen, Karsten & Li, C., 2022, In: Molecular Nutrition and Food Research. 66, 13, 14 p., 2101124.

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Integrating convolution and self-attention improves language model of human genome for interpreting non-coding regions at base-resolution

YANG, Meng, Huang, L., Huang, H., Tang, H., Zhang, N., Yang, H., Wu, J. & Mu, F., 2022, In: Nucleic Acids Research. 50, 14, 19 p., e81.

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Integrative analyses of probiotics, pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)

Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Jørgensen, Louise von Gersdorff, Forberg, T., Zuo, S., Kania, Per, Buchmann, Kurt, Kristiansen, Karsten, Bojesen, Anders Miki & Limborg, Morten Tønsberg, 2022, In: Journal of Applied Microbiology. 132, 4, p. 3201-3216 16 p.

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Iodine Bioavailability and Accumulation of Arsenic and Cadmium in Rats Fed Sugar Kelp (Saccharina latissima)

Fjære, E., Poulsen, R., Duinker, A., Liaset, B., Hansen, M., Madsen, L. & Myrmel, L. S., 2022, In: Foods. 11, 24, 3943.

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Iron oxide coated sand (IOS): Scale-up analysis and full-scale application for phosphorus removal from goat farm wastewater

Zhang, R., Wang, L., Lakho, F. H., Yang, X., Depuydt, V., Igodt, W., Le, H. Q., Rousseau, D. P. L. & Van Hulle, S., 2022, In: Separation and Purification Technology. 284, 10 p., 120213.

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Irradiance, Water Column O₂, and Tide Drive Internal O₂ Dynamics and Meristem H₂S Detection in the Dominant Caribbean-Tropical Atlantic Seagrass, Thalassia testudinum

Koch, M. S., Johnson, C. R., Madden, C. J. & Pedersen, Ole, 2022, In: Estuaries and Coasts. 45, 8, p. 2543-2559 17 p.

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Isolation and Crystallization of the D156C Form of Optogenetic ChR2

Zhang, L., Wang, Kaituo, Ning, S., Pedersen, Per Amstrup, Duelli, A. S. & Gourdon, Pontus Emanuel, 2022, In: Cells. 11, 5, 11 p., 895.

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JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

Castro-Mondragon, J. A., Riudavets-Puig, R., Rauluseviciute, I., Lemma, R. B., Turchi, L., Blanc-Mathieu, R., Lucas, J., Boddie, P., Khan, A., Perez, N. M., Fornes, O., Leung, T. Y., Aguirre, A., Hammal, F., Schmelter, D., Baranasic, D., Ballester, B., Sandelin, A., Lenhard, B., Vandepoele, K. & 3 others, Wasserman, W. W., Parcy, F. & Mathelier, A., 2022, In: Nucleic acids symposium series. 50, D1, p. D165-D173 9 p.

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Joint identification of sex and sex-linked scaffolds in non-model organisms using low depth sequencing data

Nursyifa, Casia, Brüniche-Olsen, Anna, Garcia Erill, Genís, Heller, Rasmus & Albrechtsen, Anders, 2022, In: Molecular Ecology Resources. 22, 2, p. 458-467 10 p.

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Key Knowledge Gaps to Fill at the Cell-To-Ecosystem Level in Marine B-Vitamin Cycling

Wienhausen, G., Bittner, Meriel Jennifer & Paerl, R. W., 2022, In: Frontiers in Marine Science. 9, 9 p., 876726.

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Kleptoplast distribution, photosynthetic efficiency and sequestration mechanisms in intertidal benthic foraminifera

Jesus, B., Jauffrais, T., Trampe, Erik, Goessling, J. W., Lekieffre, C., Meibom, A., Kühl, Michael & Geslin, E., 2022, In: ISME Journal. 16, 3, p. 822-832 11 p.

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Kortlægning af lavbundsjord til naturgenopretning

Fløjgaard, C., Johansen, O. M., Andersen, D. K., Brunbjerg, A. K., Bruun, Hans Henrik, Groom, G. & Ejrnæs, R., 2022, In: Vand & Jord. 29, 2, p. 58-61 4 p.

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LPJ-GUESS/LSMv1.0: a next-generation land surface model with high ecological realism

Belda, D. M., Anthoni, P., Wårlind, D., Olin, S., Schurgers, Guy, Tang, Jing, Smith, B. & Arneth, A., 2022, In: Geoscientific Model Development. 15, 17, p. 6709-6745 37 p.

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Lacunae rostralis: A new structure on the rostrum of sailfish Istiophorus platypterus

Häge, J., Hansen, M. J., Pacher, K., Dhellemmes, F., Domenici, P., Steffensen, John Fleng, Breuker, M., Krause, S., Hildebrandt, T. B., Fritsch, G., Bach, P., Sabarros, P. S., Zaslansky, P., Mahlow, K., Schauer, M., Müller, J. & Krause, J., 2022, In: Journal of Fish Biology. 100, 5, p. 1205-1213 9 p.

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Large-Scale Genomic Epidemiology of Klebsiella pneumoniae Identified Clone Divergence with Hypervirulent Plus Antimicrobial-Resistant Characteristics Causing Within-Ward Strain Transmissions

Pei, N., Li, Y., Liu, C., Jian, Z., Liang, T., Zhong, Y., Sun, W., He, J., Cheng, X., Li, H., Lei, X., Liu, X., Deng, Z., Liu, Q., Chen, X., Yan, Q., Kristiansen, Karsten, Li, J. & Liu, W., 2022, In: Microbiology Spectrum. 10, 2, 14 p., e02698-21.

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Lasmiditan and 5-Hydroxytryptamine in the rat trigeminal system: expression, release and interactions with 5-HT₁ receptors

Edvinsson, J. C. A., Maddahi, A., Christiansen, I. M., Reducha, Philip Victor, Warfvinge, K., Sheykhzade, Majid, Edvinsson, L. & Haanes, Kristian Agmund, 2022, In: The Journal of Headache and Pain. 23, 19 p., 26.

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Leading trait dimensions in flood-tolerant plants

Pan, Y., Cieraad, E., Armstrong, J., Armstrong, W., Clarkson, B. R., Pedersen, Ole, Visser, E. J. W., Voesenek, L. A. C. J. & van Bodegom, P. M., 2022, In: Annals of Botany. 130, 3, p. 383-392 10 p.

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Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes

Jie, Z., Chen, C., Hao, L., Li, F., Song, L., Zhang, X., Zhu, J., Tian, L., Tong, X., Cai, K., Zhang, Z., Ju, Y., Yu, X., Li, Y., Zhou, H., Lu, H., Qiu, X., Li, Q., Liao, Y., Zhou, D. & 21 others, Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J., Wang, R., Liu, N., Wu, J., Zhang, W., Liu, X., Zong, Y., Liu, W., Xiao, L., Hou, Y., Xu, X., Yang, H., Wang, J., Kristiansen, Karsten & Jia, H., 2022, In: Genomics, Proteomics and Bioinformatics. 20, 2, p. 304-321 18 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Life-threatening viral disease in a novel form of autosomal recessive IFNAR2 deficiency in the Arctic

Duncan, C. J. A., Skouboe, M. K., Howarth, S., Hollensen, A. K., Chen, R., Børresen, M. L., Thompson, B. J., Spegarova, J. S., Hatton, C. F., Stæger, F. F., Andersen, M. K., Whittaker, J., Paludan, S. R., Jørgensen, S. E., Thomsen, M. K., Mikkelsen, J. G., Heilmann, C., Buhas, D., Øbro, N. F., Bay, J. T. & 17 others, Marquart, Hanne Vibeke Hansen, Morena, M. T. D. L., Klejka, J. A., Hirschfeld, M., Borgwardt, L., Forss, I., Masmas, T., Poulsen, A., Noya, F., Rouleau, G., Hansen, Torben, Zhou, S., Albrechtsen, Anders, Alizadehfar, R., Allenspach, E. J., Hambleton, S. & Mogensen, T. H., 2022, In: Journal of Experimental Medicine. 219, 6, 26 p., e20212427.

Research output: Contribution to journal › Journal article › Research › peer-review

Lipolysis regulates major transcriptional programs in brown adipocytes

Markussen, L. K., Rondini, E. A., Johansen, O. S., Madsen, J. G. S., Sustarsic, E. G., Marcher, A. B., Hansen, Jacob B., Gerhart-Hines, Zach, Granneman, J. G. & Mandrup, S., 2022, In: Nature Communications. 13, 1, 16 p., 3956.

Research output: Contribution to journal › Journal article › Research › peer-review

Living on fire: Deactivating fire coral polyps for larval settlement and symbiosis in the fire coral-associated barnacle Wanella milleporae (Thoracicalcarea: Wanellinae)

Yap, F. C., Høeg, Jens Thorvald & Chan, B. K. K., 2022, In: Ecology and Evolution. 12, 7, 17 p., e9057.

Research output: Contribution to journal › Journal article › Research › peer-review

LocalNgsRelate: a software tool for inferring IBD sharing along the genome between pairs of individuals from low-depth NGS data

Severson, A. L., Korneliussen, Thorfinn Sand & Moltke, Ida, 2022, In: Bioinformatics. 38, 4, p. 1159-1161 3 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Long-Range PCR Reveals the Genetic Cargo of IncP-1 Plasmids in the Complex Microbial Community of an On-Farm Biopurification System Treating Pesticide-Contaminated Wastewater

Dunon, V., Holmsgaard, P. N., Dealtry, S., Lavigne, R., Sørensen, Søren Johannes, Smalla, K., Top, E. M. & Springael, D., 2022, In: Applied and Environmental Microbiology. 88, 3, 17 p., e01648-21.

Research output: Contribution to journal › Journal article › Research › peer-review

Long-Term Fertilization Strategy Impacts Rhizoctonia solani–Microbe Interactions in Soil and Rhizosphere and Defense Responses in Lettuce

Sommermann, L., Babin, D., Behr, J. H., Chowdhury, S. P., Sandmann, M., Windisch, S., Neumann, G., Nesme, Joseph, Sørensen, Søren Johannes, Schellenberg, I., Rothballer, M., Geistlinger, J., Smalla, K. & Grosch, R., 2022, In: Microorganisms. 10, 9, 27 p., 1717.

Research output: Contribution to journal › Journal article › Research › peer-review

Loss of sucrase-isomaltase function increases acetate levels and improves metabolic health in Greenlandic cohorts

Andersen, M. K., Skotte, L., Jørsboe, E., Polito, R., Stæger, F. F., Aldiss, P., Hanghøj, K., Waples, R. K., Santander, C. G., Grarup, N., Dahl-Petersen, I. K., Diaz, L. J., Overvad, M., Senftleber, N. K., Søborg, B., Larsen, C. V. L., Lemoine, C., Pedersen, O., Feenstra, B., Bjerregaard, P. & 9 others, Melbye, M., Jørgensen, M. E., Færgeman, N. J., Koch, A., Moritz, Thomas, Gillum, M. P., Moltke, Ida, Hansen, Torben & Albrechtsen, Anders, 2022, In: Gastroenterology. 162, 4, p. 1171-1182.e3

Research output: Contribution to journal › Journal article › Research › peer-review

Loss of tetraspanin-7 expression reduces pancreatic β-cell exocytosis Ca²⁺ sensitivity but has limited effect on systemic metabolism

McLaughlin, K., Acreman, S., Nawaz, S., Cutteridge, J., Clark, A., Knudsen, Jakob Grunnet, Denwood, G., Spigelman, A. F., Fox, J. E. M., Singh, S. P., MacDonald, P. E., Hastoy, B. & Zhang, Q., 2022, In: Diabetic Medicine. 39, 12, 13 p., e14984.

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Low irradiance disrupts the internal O₂ dynamics of seagrass (Thalassia testudinum) leading to shoot meristem H₂S intrusion

Koch, M. S., Johnson, C. R., Madden, C. J. & Pedersen, Ole, 2022, In: Aquatic Botany. 181, 11 p., 103532.

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MDsrv: visual sharing and analysis of molecular dynamics simulations

Kampfrath, M., Staritzbichler, R., Hernández, G. P., Rose, A. S., Tiemann, Johanna Katarina Sofie, Scheuermann, G., Wiegreffe, D. & Hildebrand, P. W., 2022, In: Nucleic Acids Research. 50, W1, p. W483-W489 7 p.

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Maintenance of the Shigella sonnei Virulence Plasmid Is Dependent on Its Repertoire and Amino Acid Sequence of Toxin-Antitoxin Systems

Martyn, J. E., Pilla, G., Hollingshead, S., Winther, K. S., Lea, S., McVicker, G. & Tang, C. M., 2022, In: Journal of Bacteriology. 204, 3, 14 p., e00519-21.

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Male ant reproductive investment in a seasonal wet tropical forest: Consequences of future climate change

Donoso, D. A., Basset, Y., Shik, Jonathan Z., Forrister, D. L., Uquillas, A., Salazar-Méndez, Y., Arizala, S., Polanco, P., Beckett, S., Diego Dominguez, G. & Barrios, H., 2022, In: PLoS ONE. 17, 3 , 13 p., e0266222.

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Mapping global lake dynamics reveals the emerging roles of small lakes

Pi, X., Luo, Q., Feng, L., Xu, Yang, Tang, Jing, Liang, X., Ma, E., Cheng, R., Fensholt, Rasmus, Brandt, Martin Stefan, Cai, X., Gibson, L., Liu, J., Zheng, C., Li, W. & Bryan, B. A., 2022, In: Nature Communications. 13, 12 p., 5777.

Research output: Contribution to journal › Journal article › Research › peer-review

Mass Spectrometry and Machine Learning Reveal Determinants of Client Recognition by Antiamyloid Chaperones

Osterlund, N., Vosselman, T., Leppert, A., Graslund, A., Jornvall, H., Ilag, L. L., Marklund, E. G., Elofsson, A., Johansson, J., Sahin, Cagla & Landreh, M., 2022, In: Molecular & Cellular Proteomics. 21, 10, 10 p., 100413.

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Massively targeted evaluation of therapeutic CRISPR off-targets in cells

Pan, X., Qu, K., Yuan, H., Xiang, X., Anthon, C., Pashkova, L., Liang, X., Han, P., Corsi, G. I., Xu, F., Liu, P., Zhong, J., Zhou, Y., Ma, T., Jiang, H., Liu, J., Wang, J., Jessen, N., Bolund, L., Yang, H. & 5 others, Xu, X., Church, G. M., Gorodkin, Jan, Lin, L. & Luo, Y., 2022, In: Nature Communications. 13, 14 p., 4049.

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Maternal gut microbiota during pregnancy and the composition of immune cells in infancy

Gao, Y., O'Hely, M., Quinn, T. P., Ponsonby, A., Harrison, L. C., Frøkiær, Hanne, Tang, M. L. K., Brix, S., Kristiansen, Karsten, Burgner, D., Saffery, R., Ranganathan, S., Collier, F., Vuillermin, P. & BIS Investigator Grp, B. I. G., 2022, In: Frontiers in Immunology. 13, 11 p., 986340.

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Mesenchymal-epithelial crosstalk shapes intestinal regionalisation via Wnt and Shh signalling

Maimets, Martti, Pedersen, M. T., Guiu, J., Dreier, J., Thodberg, Malte, Antoku, Yasuko, Schweiger, P. J., Rib, Leonor, Bardini Bressan, Raul, Miao, Y., Garcia, K. C., Sandelin, Albin Gustav, Serup, Palle & Jensen, Kim Bak, 2022, In: Nature Communications. 13, 12 p., 715.

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Metabolic Profiling of Interspecies Interactions During Sessile Bacterial Cultivation Reveals Growth and Sporulation Induction in Paenibacillus amylolyticus in Response to Xanthomonas retroflexus

Herschend, J., Ernst, M., Koren, K., Melnik, A. V., da Silva, R. R., Røder, Henriette Lyng, Damholt, Z. B. V., Hägglund, Per Mårten, Svensson, B., Sørensen, Søren Johannes, Kühl, Michael, Dorrestein, P. C. & Burmølle, Mette, 2022, In: Frontiers in Cellular and Infection Microbiology. 12, 17 p., 805473.

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Metagenomic analysis reveals crosstalk between gut microbiota and glucose-lowering drugs targeting the gastrointestinal tract in Chinese patients with type 2 diabetes: a 6 month, two-arm randomised trial

Zhang, X., Ren, H., Zhao, C., Shi, Z., Qiu, L., Yang, F., Zhou, X., Han, X., Wu, K., Zhong, H., Li, Y., Li, J. & Ji, L., 2022, In: Diabetologia. 65, 11, p. 1613-1626 14 p.

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Metagenomic evidence for co-occurrence of antibiotic, biocide and metal resistance genes in pigs

Li, Xuan Ji, Rensing, C., Vestergaard, G., Arumugam, Mani, Nesme, Joseph, Gupta, S., Brejnrod, A. D. & Sørensen, Søren Johannes, 2022, In: Environment International. 158, 10 p., 106899.

Research output: Contribution to journal › Journal article › Research › peer-review