- 2023
- Published
- Published
A High Resolution, High Throughput Approach for Subcellular Spatial Omics
CHEN, Ao, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 130 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
CRI-SPA: a high-throughput method for systematic genetic editing of yeast libraries
Cachera, P., Olsson, H., Coumou, H., Jensen, M. L., Sánchez, B., Strucko, T., Van den broek, M., Daran, J., Jensen, M., Sonnenschein, N., Lisby, Michael & Mortensen, U., 2023, In: Nucleic acids symposium series. 51, 17, 14 p., e91.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Discovering functionally important sites in proteins
Cagiada, Matteo, Bottaro, S., Lindemose, Søren, Schenstrøm, S. M., Stein, Amelie, Hartmann-Petersen, Rasmus & Lindorff-Larsen, Kresten, 2023, In: Nature Communications. 14, 1, 13 p., 4175.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Understanding the Role of Individual Residues in Proteins: a Study of Missense Variants and their Impact on Function
Cagiada, Matteo, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 155 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Ecomorphological correlates of inner ear shape in Australian limb-reduced skinks (Scincidae: Sphenomorphini)
Camaiti, M., Wiles, J., Aguilar, R., Hutchinson, M. N., Hipsley, Christy Anna, Chapple, D. G. & Evans, A. R., 2023, In: Zoological Journal of the Linnean Society. 199, 4, p. 994-1012 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Macroecological and biogeographical patterns of limb reduction in the world's skinks
Camaiti, M., Evans, A. R., Hipsley, Christy Anna, Hutchinson, M. N., Meiri, S., de Oliveira Anderson, R., Slavenko, A. & Chapple, D. G., 2023, In: Journal of Biogeography. 50, 2, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacteriophages suppress CRISPR–Cas immunity using RNA-based anti-CRISPRs
Camara, Sarah, Mayo-Muñoz, D., Russel, J., Fagerlund, R. D., Madsen, Jonas Stenløkke, Fineran, P. C., Sørensen, Søren Johannes & Pinilla Redondo, Rafael, 2023, In: Nature. 623, 7987, p. 601-607 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Restricted O2 consumption in pea roots induced by hexanoic acid is linked to depletion of Krebs cycle substrates
Casolo, V., Zancani, M., Pellegrini, Elisa, Filippi, A., Gargiulo, S., Konnerup, D., Morandini, P. & Pedersen, Ole, 2023, In: Physiologia Plantarum. 175, 5, 13 p., e14024.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lymph Vessels Associate with Cancer Stem Cells from Initiation to Malignant Stages of Squamous Cell Carcinoma
Cazzola, Anna, Calzón Lozano, D., Menne, D. H., Dávila Pedrera, R., Liu, J., Peña-Jiménez, D., Fontenete, S., Halin, C. & Perez-Moreno, Mirna, 2023, In: International Journal of Molecular Sciences. 24, 17, 20 p., 13615.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multiple paths toward repeated phenotypic evolution in the spiny-leg adaptive radiation (Tetragnatha; Hawai'i)
Cerca, J., Cotoras, D. D., Santander, Cindy, Bieker, V. C., Hutchins, L., Morin-Lagos, J., Prada, C. F., Kennedy, S., Krehenwinkel, H., Rominger, A. J., Meier, J., Dimitrov, D., Struck, T. H. & Gillespie, R. G., 2023, In: Molecular Ecology. 32, 18, p. 4971-4985 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-cell spatial transcriptome reveals cell-type organization in the macaque cortex
Chen, A., Sun, Y., Lei, Y., Li, C., Liao, S., Meng, J., Bai, Y., Liu, Z., Liang, Z., Zhu, Z., Yuan, N., Yang, H., Wu, Z., Lin, F., Wang, K., Li, M., Zhang, S., Yang, M., Fei, T., Zhuang, Z. & 85 others, , 2023, In: Cell. 186, 17, p. 3726-3743.e24 43 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evidence for early domestic yak, taurine cattle, and their hybrids on the Tibetan Plateau
Chen, N., Zhang, Z., Hou, J., Chen, J., Gao, X., Tang, L., Wangdue, S., Zhang, X., Sinding, Mikkel Holger Strander, Liu, X., Han, J., Lü, H., Lei, C., Marshall, F. & Liu, X., 2023, In: Science Advances. 9, 50, 13 p., eadi6857.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing
Chen, N., Xia, X., Hanif, Q., Zhang, F., Dang, R., Huang, B., Lyu, Y., Luo, X., Zhang, H., Yan, H., Wang, S., Wang, F., Chen, J., Guan, X., Liu, Y., Li, S., Jin, L., Wang, P., Sun, L., Zhang, J. & 37 others, , 2023, In: Nature Communications. 14, 1, 13 p., 7803.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Informing the SWAT model with remote sensing detected vegetation phenology for improved modeling of ecohydrological processes
Chen, S., Fu, Y. H., Wu, Z., Hao, F., Hao, Z., Guo, Y., Geng, X., Li, X., Zhang, X., Tang, Jing, Singh, V. P. & Zhang, X., 2023, In: Journal of Hydrology. 616, 13 p., 128817.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Long divergent haplotypes introgressed from wild sheep are associated with distinct morphological and adaptive characteristics in domestic sheep
Cheng, H., Zhang, Z., Wen, J., Lenstra, J. A., Heller, Rasmus, Cai, Y., Guo, Y., Li, M., Li, R., Li, W., He, S., Wang, J., Shao, J., Song, Y., Zhang, L., Billah, M., Wang, X., Liu, M. & Jiang, Y., 2023, In: PLOS Genetics. 19, 2, 27 p., e1010615.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vocal interactivity in-and-between humans, animals and robots
Chetouani, M., Briefer, Elodie, Dassow, A., Marxer, R., Moore, R. K., Obin, N. & Stowell, D., 2023, In: Interaction Studies. 24, 1, p. 1-4 4 p.Research output: Contribution to journal › Editorial › Research › peer-review
- Published
Tyrosine kinases compete for growth hormone receptor binding and regulate receptor mobility and degradation
Chhabra, Y., Seiffert, P., Gormal, R. S., Vullings, M., Lee, C. M. M., Wallis, T. P., Dehkhoda, F., Indrakumar, S., Jacobsen, Nina Louise, Lindorff-Larsen, Kresten, Durisic, N., Waters, M. J., Meunier, F. A., Kragelund, Birthe Brandt & Brooks, A. J., 2023, In: Cell Reports. 42, 5, 26 p., 112490.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Muscle PGC-1α modulates hepatic mitophagy regulation during aging
Christensen, N. M., Jørgensen, Stine Ringholm, Buch, B. T., Gudiksen, Anders, Halling, Jens Frey & Pilegaard, Henriette, 2023, In: Experimental Gerontology. 172, 9 p., 112046.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs
Ciucani, M. M., Ramos-Madrigal, J., Hernández-Alonso, G., Carmagnini, A., Aninta, S. G., Sun, X., Scharff-Olsen, C. H., Lanigan, L. T., Fracasso, I., Clausen, C. G., Aspi, J., Kojola, I., Baltrūnaitė, L., Balčiauskas, L., Moore, J., Åkesson, M., Saarma, U., Hindrikson, M., Hulva, P., Bolfíková, B. Č. & 19 others, , 2023, In: iScience. 26, 8, 22 p., 107307.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Drosophila TNF/TNFRs: At the crossroad between metabolism, immunity, and tissue homeostasis
Colombani, Julien & Andersen, Ditte Skovaa, 2023, In: FEBS Letters. 597, 19, p. 2416-2432 17 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Discordant upslope range shifts shuffle parasitoid-host species interactions
Colwell, R. K., 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 51, e2318022120.Research output: Contribution to journal › Comment/debate › Research › peer-review
- E-pub ahead of print
Coexisting with carnivores: insights into local attitudes toward African wild dogs (Lycaon pictus) in the Maasai Mara, Kenya
Cornu, L., Broekhuis, F., Kavwele, C. M., Mogensen, N., Sakat, D. & Briefer, Elodie, 2023, (E-pub ahead of print) In: Human Dimensions of Wildlife.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Legionella maioricensis sp. nov., a new species isolated from the hot water distribution systems of a hospital and a shopping center during routine sampling
Crespi, S., Drašar, V., Salvà-Serra, F., Jaén-Luchoro, D., Piñeiro-Iglesias, B., Lindemann, P. C., Aliaga-Lozano, F., Fernandez Juarez, Victor, Coll-García, G., Moore, E. R. B. & Bennasar-Figueras, A., 2023, In: International Journal of Systematic and Evolutionary Microbiology. 73, 1, 12 p., 005686.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Four additional natural 7-deazaguanine derivatives in phages and how to make them
Cui, L., Balamkundu, S., Liu, C. F., Ye, H., Hourihan, J., Rausch, A., Hauß, C., Nilsson, E., Hoetzinger, M., Holmfeldt, K., Zhang, W., Martinez-Alvarez, L., Peng, X., Tremblay, D., Moinau, S., Solonenko, N., Sullivan, M. B., Lee, Y. J., Mulholland, A., Weigele, P. R. & 3 others, , 2023, In: Nucleic Acids Research. 51, 17, p. 9214-9226 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Crosstalk between tumor acidosis, p53 and extracellular matrix regulates pancreatic cancer aggressiveness
Czaplinska, D., Ialchina, Renata, Andersen, Henriette Berg, Yao, Jiayi, Stigliani, Arnaud, Dannesboe, Johs, Flinck, M., Chen, X., Mitrega, J., Gnosa, S. P., Dmytriyeva, O., Alves, F., Napp, J., Sandelin, Albin Gustav & Pedersen, Stine Helene Falsig, 2023, In: International Journal of Cancer. 152, 6, p. 1210-1225 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Warmer winters result in reshaping of the European beech forest soil microbiome (bacteria, archaea and fungi) - With potential implications for ecosystem functioning
Dahl, M. B., Kreyling, J., Petters, S., Wang, H., Mortensen, M. S., Maccario, Lorrie, Sørensen, Søren Johannes, Urich, T. & Weigel, R., 2023, In: Environmental Microbiology. 25, 6, 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigating Design Rules for Photoinduced Electron Transfer Quenching in Triangulenium Probes
Jensen, Jesper Dahl, Jakobsen, R. K., Yao, Z. & Laursen, Bo Wegge, 2023, In: Chemistry - A European Journal. 29, 46, 10 p., e202301077.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Chinese indicine pangenome reveals a wealth of novel structural variants introgressed from other Bos species
Dai, X., Bian, P., Hu, D., Luo, F., Huang, Y., Jiao, S., Wang, X., Gong, M., Li, R., Cai, Y., Wen, J., Yang, Q., Deng, W., Nanaei, H. A., Wang, Y., Wang, F., Zhang, Z., Rosen, B. D., Heller, Rasmus & Jiang, Y., Aug 2023, In: Genome Research. 33, 8, p. 1284-1298 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Long-term immersion of compostable plastics in marine aquarium: Microbial biofilm evolution and polymer degradation
Delacuvellerie, A., Brusselman, A., Cyriaque, V., Benali, S., Moins, S., Raquez, J. M., Gobert, S. & Wattiez, R., 2023, In: Marine Pollution Bulletin. 189, 10 p., 114711.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ecological Indicator Values for Europe (EIVE) 1.0
Dengler, J., Jansen, F., Chusova, O., Hüllbusch, E., Nobis, M. P., Van Meerbeek, K., Axmanová, I., Bruun, H. H., Chytrý, M., Guarino, R., Karrer, G., Moeys, K., Raus, T., Steinbauer, M. J., Tichý, L., Tyler, T., Batsatsashvili, K., Bita-Nicolae, C., Didukh, Y., Diekmann, M. & 14 others, , 2023, In: Vegetation Classification and Survey. 4, p. 7-29 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Role of H+,K+ -ATPase and pH-sensitive K2P channels in pancreatic cancer
Deshar, Ganga, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 114 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Circular and Circulating DNA in Inflammatory Bowel Disease: From Pathogenesis to Potential Molecular Therapies
Di Vincenzo, F., Yadid, Y., Petito, V., Emoli, V., Masi, L., Gerovska, D., Araúzo-Bravo, M. J., Gasbarrini, A., Regenberg, Birgitte & Scaldaferri, F., 2023, In: Cells. 12, 15, 29 p., 1953.Research output: Contribution to journal › Review › Research › peer-review
- Published
Activation and substrate specificity of the human P4-ATPase ATP8B1
Dieudonné, T., Kümmerer, Felix, Laursen, M. J., Stock, C., Flygaard, R. K., Khalid, S., Lenoir, G., Lyons, J. A., Lindorff-Larsen, Kresten & Nissen, P., 2023, In: Nature Communications. 14, 1, 14 p., 7492.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Indirect maternal effects via nest microbiome composition drive gut colonization in altricial chicks
Diez‐Méndez, D., Bodawatta, Kasun Harshana, Freiberga, I., Klečková, I., Jønsson, Knud Andreas, Poulsen, Michael & Sam, K., 2023, In: Molecular Ecology. 32, 13, p. 3657-3671 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Out with a flash: Inactivation mechanism, structure and kinetics of copepod luciferases with gaussia luciferase as a representative example
Dijkema, F. M., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 255 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
DoxoDB: A Database for the Expression Analysis of Doxorubicin-Induced lncRNA Genes
Distefano, R., Ilieva, M., Madsen, J. H., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 4, 24 p., 39.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
T2DB: A Web Database for Long Non-Coding RNA Genes in Type II Diabetes
Distefano, R., Ilieva, M., Madsen, J. H., Ishii, H., Aikawa, M., Rennie, Sarah & Uchida, S., 2023, In: Non-coding RNA. 9, 3, 20 p., 30.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbe-mineral interactions in the Plastisphere: Coastal biogeochemistry and consequences for degradation of plastics
Dodhia, M. S., Rogers, K. L., Fernandez Juarez, Victor, Carreres-Calabuig, J. A., Löscher, C. R., Tisserand, A. A., Keulen, N., Riemann, Lasse, Shashoua, Y. & Posth, Nicole Rita Elisabeth, 2023, In: Frontiers in Marine Science. 10, 17 p., 1134815.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extracting DNA from soil or directly from isolated nematodes indicate dissimilar community structure for Europe-wide forest soils
Donhauser, J., Briones, M. J. I., Mikola, J., Jones, D. L., Eder, R., Filser, J., Frossard, A., Krogh, P. H., Sousa, J. P., Cortet, J., Desie, E., Domene, X., Djuric, S., Hackenberger, D., Jimenez, J. J., Iamandei, M., Rissmann, C., Schmidt, O., Shanskiy, M., Silfver, T. & 4 others, , 2023, In: Soil Biology and Biochemistry. 185, 16 p., 109154.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Compromised junctional integrity phenocopies age-dependent renal dysfunction in Drosophila Snakeskin mutants
Dornan, A. J., Halberg, Kenneth Veland, Beuter, L. K., Davies, S. A. & Dow, J. A. T., 2023, In: Journal of Cell Science. 136, 19, 15 p., jcs261118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Sea Aster mining bee Colletes halophilus Verhoeff, 1944 (Hymenoptera: Colletidae) widely distributed at the Baltic Sea coast of Denmark and Germany
Drews, A., Adam, K., Gräper, J., Herrmann, H., Koppitz, C., Kornmilch, J., Madsen, Henning Bang, Rasmussen, C., Török, M. & Kuhlmann, M. (ed.), 2023, In: Faunistisch-Ökologische Mitteilungen. 12, p. 13-21 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Biology and Life Cycle of Enigmatic Crustacean Y-Larvae: A Review
Dreyer, N., Olesen, Jørgen, Grygier, M. J., Eibye-Jacobsen, Danny, Høeg, Jens Thorvald, Kerbl, A., Fujita, Y., Kolbasov, G. A., Savchenko, A. S., Worsaae, Katrine, Palero, F. & Chan, B. K. K., 2023, Oceanography and Marine Biology: An Annual Review, Volume 61. Hawkins, S. J., Todd, P. A. & Russell, B. D. (eds.). CRC Press, p. 81-126 46 p. (Oceanography and Marine Biology, Vol. 61).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Evaluation of the Impact of BaP Exposure on the Gut Microbiota and Allergic Responses in an OVA-Sensitized Mouse Model
Du, B., Xiao, X., Wang, H., Li, W., Xia, Z., Yang, P., Huang, S. K., Yuan, R., Liu, J., Han, M., Zou, Y., Zhu, J., He, D., Lyu, J., Jin, X., Xu, X., Wang, J., Yang, H., Xiao, L., Liu, X. & 1 others, , 2023, In: Environmental Health Perspectives. 131, 6, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hordeum vulgare differentiates its response to beneficial bacteria
Duan, Y., Han, M., Grimm, M., Schierstaedt, J., Imani, J., Cardinale, M., Le Jean, M., Nesme, Joseph, Sørensen, Søren Johannes & Schikora, A., 2023, In: BMC Plant Biology. 23, 1, 16 p., 460.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
ClockstaRX: testing molecular clock hypotheses with genomic data
Duchene, David, Duchêne, S., Stiller, Josefin, Heller, Rasmus & Ho, S. Y. W., 2023, bioRxiv, 15 p.Research output: Working paper › Preprint › Research
- Published
A YTHDF–PABP interaction is required for m6A-mediated organogenesis in plants
Tankmar, Mathias Due, Reichel, M., Arribas Hernandez, Laura & Brodersen, Peter, 2023, In: EMBO Reports. 24, 12, 19 p., e57741.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomics of adaptive evolution in the woolly mammoth
Díez-del-Molino, D., Dehasque, M., Chacón-Duque, J. C., Chrzanová Pecnerová, Patrícia, Tikhonov, A., Protopopov, A., Plotnikov, V., Kanellidou, F., Nikolskiy, P., Mortensen, P., Danilov, G. K., Vartanyan, S., Gilbert, M Thomas P, Lister, A. M., Heintzman, P. D., van der Valk, T. & Dalén, L., 2023, In: Current Biology. 33, 9, 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of ARF7 in Arabidopsis thaliana during lateral root formation and pluripotency acquisition
Ebstrup, E. N., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 102 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Aquaporin water channels affect the response of conventional anticancer therapies of 3D grown breast cancer cells
Edamana, S., Pedersen, Stine Helene Falsig & Nejsum, L. N., 2023, In: Biochemical and Biophysical Research Communications. 639, p. 126-133 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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