Department of Biology

 

 
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  1. 2023
  2. Published

    Improved predictions of phase behaviour of intrinsically disordered proteins by tuning the interaction range

    Tesei, Giulio & Lindorff-Larsen, Kresten, 2023, In: Open Research Europe. 2, 94, 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Increased exosomal Calmodulin in the urine of patients with diabetic kidney disease (DKD) may be derived from either CALM1, CALM2, CALM3 or from more than one of these genes

    Berchtold, Martin Werner, 2023, In: Clinica Chimica Acta. 548, 2 p., 117515.

    Research output: Contribution to journal › Letter › Research › peer-review

  4. Published

    Indirect maternal effects via nest microbiome composition drive gut colonization in altricial chicks

    Diez‐Méndez, D., Bodawatta, Kasun Harshana, Freiberga, I., Klečková, I., Jønsson, Knud Andreas, Poulsen, Michael & Sam, K., 2023, In: Molecular Ecology. 32, 13, p. 3657-3671 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Informing the SWAT model with remote sensing detected vegetation phenology for improved modeling of ecohydrological processes

    Chen, S., Fu, Y. H., Wu, Z., Hao, F., Hao, Z., Guo, Y., Geng, X., Li, X., Zhang, X., Tang, Jing, Singh, V. P. & Zhang, X., 2023, In: Journal of Hydrology. 616, 13 p., 128817.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Inherent lack of CMFDA/FDA staining in certain algae and its implication for ballast water testing

    Hansen, Gert, Petersen, G., Maguet, R., Sim, E. & Madsen, T., 2023, In: Marine Pollution Bulletin. 194, Part B, 9 p., 115312.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Insectivorous bats in Indian rice fields respond to moonlight, temperature, and insect activity

    Bhalla, I. S., Razgour, O., Rigal, F. & Whittaker, R. J., 2023, In: Landscape Ecology. 38, 11, p. 2947-2963 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Insights into the conservation and diversification of the molecular functions of YTHDF proteins

    Flores-Téllez, D., Tankmar, Mathias Due, von Bülow, Sören, Chen, Junyu, Lindorff-Larsen, Kresten, Brodersen, Peter & Arribas Hernandez, Laura, 2023, In: PLOS Genetics. 19, 10, 37 p., e1010980.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Integrated NMR/Molecular Dynamics Determination of the Ensemble Conformation of a Thermodynamically Stable CUUG RNA Tetraloop

    Oxenfarth, A., Kümmerer, Felix, Bottaro, S., Schnieders, R., Pinter, G., Jonker, H. R. A., Fürtig, B., Richter, C., Blackledge, M., Lindorff-Larsen, Kresten & Schwalbe, H., 2023, In: Journal of the American Chemical Society. 145, 30, p. 16557-16572 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Integrative genetic and single cell RNA sequencing analysis provides new clues to the amyotrophic lateral sclerosis neurodegeneration

    Liu, H., Guan, Liping, Deng, M., Bolund, L., Kristiansen, Karsten, Zhang, J., Luo, Y. & Zhang, Z., 2023, In: Frontiers in Neuroscience. 17, 10 p., 1116087.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Integrative taxonomy of Central European Planetella (Diptera: Cecidomyiidae) indicates high species diversity, intraspecific variation and low host specificity

    Ševčík, J., Hippa, H., Burdíková, N., Sopuch, K., Skuhravá, M. & Bruun, Hans Henrik, 2023, In: Acta Entomologica Musei Nationalis Pragae. 63, 2, p. 413-450 38 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Interactions between microenvironmental acidity and PDAC driver mutations studied in 3D organotypic culture

    Ialchina, Renata, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 261 p.

    Research output: Book/Report › Ph.D. thesis › Research

  13. Published

    Intermittent fasting modulates the intestinal microbiota and improves obesity and host energy metabolism

    Hu, X., Xia, K., Dai, M., Han, X., Yuan, P., Liu, J., Liu, S., Jia, F., Chen, J., Jiang, F., Yu, J., Yang, H., Wang, J., Xu, X., Jin, X., Kristiansen, Karsten, Xiao, L., Chen, W., Han, Mo & Duan, S., 2023, In: npj Biofilms and Microbiomes. 9, 1, 9 p., 19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Interpreting the molecular mechanisms of disease variants in human transmembrane proteins

    Tiemann, Johanna Katarina Sofie, Zschach, Henrike, Lindorff-Larsen, Kresten & Stein, Amelie, 2023, In: Biophysical Journal. 122, 11, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Intraspecific trait variability is a key feature underlying high Arctic plant community resistance to climate warming

    Jónsdóttir, I. S., Halbritter, A. H., Christiansen, C. T., Althuizen, I. H. J., Haugum, S. V., Henn, J. J., Björnsdóttir, K., Maitner, B. S., Malhi, Y., Michaletz, S. T., Roos, R. E., Klanderud, K., Lee, H., Enquist, B. J. & Vandvik, V., 2023, In: Ecological Monographs. 93, 1, 21 p., e1555.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Intrinsically Disordered Proteins as an Instrument for Research-Integrating Teaching

    Skriver, K., Sjørup, S. A., Langkilde, A. E., Balouka, E., Christensen, C. S., Carbel, K., Decker, J. N. V., Essenbæk, D. N., Gräf, J. F., Jessen, C. H., Kristensen, P., Merrild, C., Mortensen, T. S., Nalepa, I. F., Nordsteen, B. W., Svoren, S. K., van Hall, M., Weicher, J., Wind, M. L., Zhang, D. & 8 others, Saar, Daniel, Blæsild, H., Stahlhut, M., Andersen, K. V., Dagil, Robert, Vestergaard, Bente, Ryberg, Marie L. & Kragelund, Birthe Brandt, 2023, In: The Biophysicist. 4 , 2, p. 1-7 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Investigating Design Rules for Photoinduced Electron Transfer Quenching in Triangulenium Probes

    Jensen, Jesper Dahl, Jakobsen, R. K., Yao, Z. & Laursen, Bo Wegge, 2023, In: Chemistry - A European Journal. 29, 46, 10 p., e202301077.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Investigations of Migraine Treatment Targets Using Animal Models

    Ernstsen, C., 2023, Department of Biology, Faculty of Science, Chulalongkorn University. 119 p.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    Isolation, (bio)synthetic studies and evaluation of antimicrobial properties of drimenol-type sesquiterpenes of Termitomyces fungi

    Kreuzenbeck, N. B., Dhiman, S., Roman, D., Burkhardt, I., Conlon, B. H., Fricke, J., Guo, H., Blume, J., Görls, H., Poulsen, Michael, Dickschat, J. S., Köllner, T. G., Arndt, H. & Beemelmanns, C., 2023, In: Communications Chemistry. 6, 14 p., 79.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Ketone body infusion abrogates growth hormone-induced lipolysis and insulin resistance

    Høgild, M. L., Hjelholt, A. J., Hansen, J., Pedersen, Steen, Møller, N., Wojtaszewski, Jørgen F P, Johannsen, M., Jessen, N. & Lunde Jørgensen, J. O., 2023, In: Journal of Clinical Endocrinology and Metabolism. 108, 3, p. 653-664 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Lactate and Lactylation: Clinical Applications of Routine Carbon Source and Novel Modification in Human Diseases

    Wang, Z., Hao, Dan, Zhao, S., Zhang, Z., Zeng, Z. & Wang, X., 2023, In: Molecular and Cellular Proteomics. 22, 10, 16 p., 100641.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Lactate receptor GPR81 drives breast cancer growth and invasiveness through regulation of ECM properties and Notch ligand DLL4

    Jørgensen, Kathrine Lundø, Dmytriyeva, O., Spøhr, L., Alves, Eliana Carolina Goncalves, Yao, Jiayi, Puig Blasco, Laia, Trauelsen, Mette, Ponniah, M., Severin, M., Sandelin, Albin Gustav, Kveiborg, Marie, Schwartz, Thue W. & Pedersen, Stine Helene Falsig, 2023, In: BMC Cancer. 23, 1, 20 p., 1136.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Landscape features drive insectivorous bat activity in Indian rice fields

    Bhalla, I. S., Razgour, O., Rigal, F. & Whittaker, R. J., 2023, In: Landscape Ecology. 38, 11, p. 2931-2946 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Landskabsanalyse for Gudenådalen: Pilotprojekt i forbindelse med Helhedsplan for Gudenåen

    Andersen, Erling, Andersen, Peter Stubkjær, Folvig, Sara, Jensen, M., Jessen, Mette Juhl, Larsen, K. C., Løffler, L., Munck Petersen, Rikke & Vejre, Henrik, 2023, Institut for Geovidenskab og Naturforvaltning, Københavns Universitet. 155 p. (IGN Rapport; No. marts 2023).

    Research output: Book/Report › Report › Research

  25. Published

    Leaf-level coordination principles propagate to the ecosystem scale

    Gomarasca, U., Migliavacca, M., Kattge, J., Nelson, J. A., Niinemets, Ü., Wirth, C., Cescatti, A., Bahn, M., Nair, R., Acosta, A. T. R., Arain, M. A., Beloiu, M., Black, T. A., Bruun, H. H., Bucher, S. F., Buchmann, N., Byun, C., Carrara, A., Conte, A., da Silva, A. C. & 24 others, Duveiller, G., Fares, S., Ibrom, A., Knohl, A., Komac, B., Limousin, J. M., Lusk, C. H., Mahecha, M. D., Martini, D., Minden, V., Montagnani, L., Mori, A. S., Onoda, Y., Peñuelas, J., Perez-Priego, O., Poschlod, P., Powell, T. L., Reich, P. B., Šigut, L., van Bodegom, P. M., Walther, S., Wohlfahrt, G., Wright, I. J. & Reichstein, M., 2023, In: Nature Communications. 14, 1, 11 p., 3948.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Legally protect marine food web’s lower echelons

    Bürkert, Johanna Sophie, Catonini, Federica, Bittner, Meriel Jennifer, Moedt, Sanne Mariël & Lützenburg, Gregor, 2023, In: Nature. 614, p. 624

    Research output: Contribution to journal › Comment/debate › Research

  27. Published

    Limited historical admixture between European wildcats and domestic cats

    Jamieson, A., Carmagnini, A., Howard-McCombe, J., Doherty, S., Hirons, A., Dimopoulos, E., Lin, A. T., Allen, R., Anderson-Whymark, H., Barnett, R., Batey, C., Beglane, F., Bowden, W., Bratten, J., De Cupere, B., Drew, E., Foley, N. M., Fowler, T., Fox, A., Geigl, E-M. & 35 others, Gotfredsen, Anne Birgitte, Grange, T., Griffiths, D., Groß, D., Haruda, A., Hjermind, J., Knapp, Z., Lebrasseur, O., Librado, P., Lyons, L. A., Mainland, I., McDonnell, C., Muñoz-Fuentes, V., Nowak, C., O'Connor, T., Peters, J., Russo, I. M., Ryan, H., Sheridan, A., Sinding, Mikkel Holger Strander, Skoglund, P., Swali, P., Symmons, R., Thomas, G., Jensen, Theis Zetner Trolle, Kitchener, A. C., Senn, H., Lawson, D., Driscoll, C., Murphy, W. J., Beaumont, M., Ottoni, C., Sykes, N., Larson, G. & Frantz, L., 2023, In: Current Biology. 33, 21, p. 4751-4760.e14

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Lineage-specific accelerated sequences underlying primate evolution

    Bi, X., Zhou, L., Zhang, J., Feng, S., Hu, M., Cooper, D. N., Lin, J., Li, J., Wu, D. & KU, thw266, 2023, In: Science Advances. 9, 22, 12 p., eadc9507.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Linkages between seagrass tissue O2 dynamics and ecosystem oxidation and feedbacks are revealed using microsensors in situ

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2023, p. 221. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  30. Published

    Liquid-Liquid Phase Separation Primes Spider Silk Proteins for Fiber Formation via a Conditional Sticker Domain

    Leppert, A., Chen, G., Lama, D., Sahin, Cagla, Railaite, V., Shilkova, O., Arndt, T., Marklund, E. G., Lane, D. P., Rising, A. & Landreh, M., 2023, In: Nano Letters. 23, 12, 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Litter chemistry of common European tree species drives the feeding preference and consumption rate of soil invertebrates, and shapes the diversity and structure of gut and faecal microbiomes

    Heděnec, P., Zheng, H., Siqueira, D. P., Peng, Y., Schmidt, Inger Kappel, Frøslev, Tobias Guldberg, Kjøller, Rasmus, Li, H., Frouz, J. & Vesterdal, Lars, 2023, In: Soil Biology and Biochemistry. 177, 13 p., 108918.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Living on the edge – first survey of loriciferans along the Atacama Trench

    Sørensen, Martin Vinther, Herranz, Maria, Grzelak, K., Shimabukuro, M., Kristensen, Reinhardt Møbjerg & Zeppilli, D., 2023, In: European Journal of Taxonomy. 879, p. 162-187

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Local adaptation through countergradient selection in northern populations of Skeletonema marinoi

    Sefbom, J., Kremp, A., Hansen, Per Juel, Johannesson, K., Godhe, A. & Rengefors, K., 2023, In: Evolutionary Applications. 16, 2, 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Long divergent haplotypes introgressed from wild sheep are associated with distinct morphological and adaptive characteristics in domestic sheep

    Cheng, H., Zhang, Z., Wen, J., Lenstra, J. A., Heller, Rasmus, Cai, Y., Guo, Y., Li, M., Li, R., Li, W., He, S., Wang, J., Shao, J., Song, Y., Zhang, L., Billah, M., Wang, X., Liu, M. & Jiang, Y., 2023, In: PLOS Genetics. 19, 2, 27 p., e1010615.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Long-read MinION™ sequencing of 16S and 16S-ITS-23S rRNA genes provides species-level resolution of Lactobacillaceae in mixed communities

    Olivier, S. A., Bull, M. K., Strube, M. L., Murphy, Rob, Ross, T., Bowman, J. P. & Chapman, B., 2023, In: Frontiers in Microbiology. 14, 15 p., 1290756.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Long-term changes of nitrogen leaching and the contributions of terrestrial nutrient sources to lake eutrophication dynamics on the Yangtze Plain of China

    Guan, Qi, Tang, Jing, Feng, L., Olin, S. & Schurgers, Guy, 2023, In: Biogeosciences. 20, 8, p. 1635–1648

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Long-term immersion of compostable plastics in marine aquarium: Microbial biofilm evolution and polymer degradation

    Delacuvellerie, A., Brusselman, A., Cyriaque, V., Benali, S., Moins, S., Raquez, J. M., Gobert, S. & Wattiez, R., 2023, In: Marine Pollution Bulletin. 189, 10 p., 114711.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Lymph Vessels Associate with Cancer Stem Cells from Initiation to Malignant Stages of Squamous Cell Carcinoma

    Cazzola, Anna, Calzón Lozano, D., Menne, D. H., Dávila Pedrera, R., Liu, J., Peña-Jiménez, D., Fontenete, S., Halin, C. & Perez-Moreno, Mirna, 2023, In: International Journal of Molecular Sciences. 24, 17, 20 p., 13615.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Lynch syndrome, molecular mechanisms and variant classification

    Abildgaard, A. B., Nielsen, S., Bernstein, I., Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2023, In: British Journal of Cancer. 128, 9 p.

    Research output: Contribution to journal › Review › Research › peer-review

  40. Published

    Lysine deserts prevent adventitious ubiquitylation of ubiquitin-proteasome components

    Kampmeyer, Caroline, Grønbæk-Thygesen, Martin, Oelerich, N., Tatham, M. H., Cagiada, Matteo, Lindorff-Larsen, K., Boomsma, Wouter, Hofmann, K. & Hartmann-Petersen, Rasmus, 2023, In: Cellular and Molecular Life Sciences. 80, 6, 18 p., 143.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Macroecological and biogeographical patterns of limb reduction in the world's skinks

    Camaiti, M., Evans, A. R., Hipsley, Christy Anna, Hutchinson, M. N., Meiri, S., de Oliveira Anderson, R., Slavenko, A. & Chapple, D. G., 2023, In: Journal of Biogeography. 50, 2, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Make the environment protect you from disease: elevated CO2 inhibits antagonists of the fungus-farming termite symbiosis

    Schmidt, Suzanne, Bos, N., Murphy, R., Koné, N. A., Silué, K. S., Meyling, Nicolai Vitt & Poulsen, Michael, 2023, In: Frontiers in Ecology and Evolution. 11, 9 p., 1134492.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Managing fuels and fluids: Network integration of osmoregulatory and metabolic hormonal circuits in the polymodal control of homeostasis in insects

    Koyama, Takashi, Rana, Danial Wasim & Halberg, Kenneth Veland, 2023, In: BioEssays. 45, 9, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Mass Spectrometry of RNA-Binding Proteins during Liquid-Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet Architectures

    Sahin, Cagla, Motso, A., Gu, X., Feyrer, H., Lama, D., Arndt, T., Rising, A., Gese, G. V., Haellberg, B. M., Marklund, E. G., Schafer, N. P., Petzold, K., Teilum, Kaare, Wolynes, P. G. & Landreh, M., 2023, In: Journal of the American Chemical Society. 145, 19, 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Mendelian randomization analyses reveal causal relationships between the human microbiome and longevity

    Liu, X., Zou, L., Nie, C., Qin, Y., Tong, X., Wang, J., Yang, H., Xu, X., Jin, X., Xiao, L., Zhang, T., Min, J., Zeng, Y., Jia, H. & Hou, Y., 2023, In: Scientific Reports. 13, 1, 13 p., 5127.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Metabolic effects of diet containing blue mussel (Mytilus edulis) and blue mussel-fed salmon in a mouse model of obesity

    Azad, A. M., Bernhard, A., Shen, A., Myrmel, L. S., Lundebye, A., Lecaudey, L. A., Fjære, E., Tri Ho, Q., Sveier, H., Kristiansen, Karsten, Limborg, Morten Tønsberg & Madsen, L., 2023, In: Food Research International. 169, 11 p., 112927.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Metabolic regulation of glucagon secretion

    Armour, Sarah Louise, Stanley, J. E., Cantley, J., Dean, E. D. & Knudsen, Jakob Grunnet, 2023, In: The Journal of endocrinology. 259, 1, 15 p., e230081.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Metaboloepigenetics in cancer, immunity and cardiovascular disease

    Keating, S. T. & El-Osta, A., 2023, In: Cardiovascular Research. 119, 2, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Metagenome-Genome wide association studies for analysis of complex diseases

    Zhang, T., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 39 p.

    Research output: Book/Report › Ph.D. thesis › Research

  50. Published

    Methane and carbon dioxide fluxes at high spatiotemporal resolution from a small temperate lake

    Sø, Jonas Stage, Sand-Jensen, Kaj, Martinsen, K. T., Polauke, E., Kjær, Johan Emil, Reitzel, K. & Kragh, T., 2023, In: Science of the Total Environment. 878, 11 p., 162895.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Methods for the purification and detection of single nucleotide KRAS mutations on extrachromosomal circular DNA in human plasma

    Hansen, Lasse Bøllehuus, Jakobsen, S. F., Zole, Egija, Noer, Julie Boertmann, Fang, L. T., Alizadeh, S., Johansen, Julia Sidenius, Mohiyuddin, M. & Regenberg, Birgitte, 2023, In: Cancer Medicine. 12, 17, p. 17679-17691 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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