- 2024
- Published
Impact of salinity and temperature on the vital rates of co-occurring Calanus glacialis and C. finmarchicus from West Greenland
Makri, M., Hansen, Per Juel & Gissel Nielsen, T., 2024, In: Marine Ecology - Progress Series. 729, p. 47-62 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient and Modern Genomes Reveal Microsatellites Maintain a Dynamic Equilibrium Through Deep Time
McComish, B. J., Charleston, M. A., Parks, M., Baroni, C., Salvatore, M. C., Li, R., KU, thw266, Millar, C. D., Holland, B. R. & Lambert, D. M., 2024, In: Genome Biology and Evolution. 16, 3, 11 p., evae017.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A region of suppressed recombination misleads neoavian phylogenomics
Mirarab, S., Rivas-González, I., Feng, S., Stiller, Josefin, Fang, Q., Mai, U., Hickey, G., Chen, G., Brajuka, N., Fedrigo, O., Formenti, G., Wolf, J. B. W., Howe, K., Antunes, A., Schierup, M. H., Paten, B., Jarvis, E. D., KU, thw266 & Braun, E. L., 1 Apr 2024, In: Proceedings of the National Academy of Sciences. 121, 15, 10 p., e2319506121.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Advancement in Spring Vegetation Phenology in the Northern Hemisphere Will Reverse After 2060 Under Future Moderate Warming Scenarios
Mo, Y., Chen, S., Wu, Z., Tang, Jing & Fu, Y., 2024, In: Earth's Future. 12, 3, 17 p., e2023EF003788.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Long-term phytoplankton dynamics in two High Arctic lakes (north-east Greenland)
Moedt, Sanne Mariël, Olrik, K., Schmidt, N. M., Jeppesen, E. & Christoffersen, Kirsten Seestern, 2024, In: Freshwater Biology. 69, 3, p. 403-415 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
FRETpredict: a Python package for FRET efficiency predictions using rotamer libraries
Montepietra, D., Tesei, Giulio, Martins, J. M., Kunze, M. B. A., Best, R. B. & Lindorff-Larsen, Kresten, 2024, In: Communications Biology . 7, 1, 10 p., 298.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Controlling biases in targeted plant removal experiments
Monteux, S., Blume-Werry, G., Gavazov, K., Kirchhoff, L., Krab, E. J., Lett, Signe, Pedersen, Emily Pickering & Väisänen, M., 2024, In: New Phytologist. 242, 4, p. 1835-1845 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Impact of the early COVID-19 pandemic on adult mental health-related dispensed medications, hospitalizations and specialist outpatient visits in Norway and Sweden: Interrupted time series analysis
Moreno-Martos, D., Zhao, J., Li, H., Nyberg, F., Bjørndal, L. D., Hajiebrahimi, M., Wettermark, B., Aakjær, Mia, Andersen, Morten, Sessa, Maurizio, Lupattelli, A., Nordeng, H. & Morales, D. R., 2024, (E-pub ahead of print) In: British Journal of Clinical Pharmacology.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial Symbiont Contributions to Fungus-Farming Termite Health and Disease
Murphy, Rob, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 317 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Acclimation of subarctic vegetation to warming and increased cloudiness
Ndah, F. A., Maljanen, M., Kasurinen, A., Rinnan, Riikka, Michelsen, Anders, Kotilainen, T. & Kivimäenpää, M., 2024, In: Plant-Environment Interactions. 5, 1, 16 p., e10130.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Checkpoint activation by Spd1: a competition-based system relying on tandem disordered PCNA binding motifs
Olsen, Johan Gotthardt, Prestel, Andreas, Kassem, N., Broendum, S. S., Hossain, Mohammad Shamim, Simonsen, Signe, Grysbæk, M., Mortensen, J., Rytkjær, L. L., Haxholm, G. W., Marabini, R., Holmberg, Christian, Carr, A. M., Crehuet, R., Nielsen, Olaf & Kragelund, Birthe Brandt, 2024, In: Nucleic acids symposium series. 52, 4, p. 2030–2044 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Assessment of salt-affected soil in selected rice irrigation schemes in Tanzania: understanding salt types for optimizing management approaches
Omar, M. M., Massawe, B. H. J., Shitindi, M. J., Pedersen, Ole, Meliyo, J. L. & Fue, K. G., 2024, In: Frontiers in Soil Science. 4, 14 p., 1372838.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Drosophila cytokine GBP2 exerts immune responses and regulates GBP1 expression through GPCR receptor Mthl10
Ono, M., Matsumura, T., Sung, E. J., Koyama, Takashi, Ochiai, M., Shears, S. B. & Hayakawa, Y., 2024, In: Insect Biochemistry and Molecular Biology. 167, 7 p., 104086.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Calls of the little auk (Alle alle) chicks reflect their behavioural contexts
Osiecka, A. N., Briefer, Elodie, Kidawa, D., Żurawska, F. & Wojczulanis-Jakubas, K., 2024, In: PLoS ONE. 19, 2, 14 p., e0299033.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Isochrony in barks of Cape fur seal (Arctocephalus pusillus pusillus) pups and adults
Osiecka, A. N., Fearey, J., Ravignani, A. & Burchardt, L. S., 2024, In: Ecology and Evolution. 14, 3, 11 p., e11085.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Strong individual distinctiveness across the vocal repertoire of a colonial seabird, the little auk, Alle alle
Osiecka, A. N., Briefer, Elodie, Kidawa, D. & Wojczulanis-Jakubas, K., 2024, In: Animal Behaviour. 210, p. 199-211 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The rostral micro-tooth morphology of blue marlin, Makaira nigricans
Pacher, K., Breuker, M., Hansen, M. J., Kurvers, R. H. J. M., Häge, J., Dhellemmes, F., Domenici, P., Steffensen, John Fleng, Krause, S., Hildebrandt, T., Fritsch, G., Bach, P., Sabarros, P. S., Zaslansky, P., Mahlow, K., Müller, J., Armas, R. G., Ortiz, H. V., Galván-Magaña, F. & Krause, J., 2024, In: Journal of Fish Biology. 104, 3, p. 713-722 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Accounting for Winter Warming Events in the Ecosystem Model LPJ-GUESS: Evaluation and Outlook
Pascual, D., Johansson, M., Pongracz, A. & Tang, Jing, 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 3, 13 p., e2023JG007464.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Monitoring of species’ genetic diversity in Europe varies greatly and overlooks potential climate change impacts
Pearman, P. B., Broennimann, O., Aavik, T., Albayrak, T., Alves, P. C., Aravanopoulos, F. A., Bertola, L. D., Biedrzycka, A., Buzan, E., Cubric-Curik, V., Djan, M., Fedorca, A., Fuentes-Pardo, A. P., Fussi, B., Godoy, J. A., Gugerli, F., Hoban, S., Holderegger, R., Hvilsom, C., Iacolina, L. & 32 others, , 2024, In: Nature Ecology and Evolution. 8, p. 267–281 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Function and induction of the root barrier to radial O2 loss. A commentary on ‘Exogenous abscisic acid induces the formation of a suberized barrier to radial oxygen loss in adventitious roots of barley (Hordeum vulgare)’
Pedersen, Ole & Jimenez Serna, Juan de la Cruz, 2024, In: Annals of Botany.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Acid–base transporters in the context of tumor heterogeneity
Pedersen, Stine Helene Falsig, 2024, In: Pflugers Archiv European Journal of Physiology. 476, p. 689–701 13 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Root acclimations to soil flooding prime rice (Oryza sativa L.) for subsequent conditions of water deficit
Peralta Ogorek, Lucas León, Song, Zhiwei, Pellegrini, Elisa, Liu, Fulai, Tomasella, M., Nardini, A. & Pedersen, Ole, 2024, In: Plant and Soil. 494, p. 529-546Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Going through changes - the role of autophagy during reprogramming and differentiation
Petersen, Morten, Ebstrup, E. & Rodriguez, Eleazar, 2024, In: Journal of Cell Science. 137, 4, 10 p., jcs261655.Research output: Contribution to journal › Review › Research › peer-review
- Published
Population genomics of the muskox' resilience in the near absence of genetic variation
Pečnerová, P., Lord, E., Garcia-Erill, G., Hanghøj, K., Rasmussen, M. S., Meisner, J., Liu, X., van der Valk, T., Santander, C. G., Quinn, L., Lin, L., Liu, S., Carøe, C., Dalerum, F., Götherström, A., Måsviken, J., Vartanyan, S., Raundrup, K., Al-Chaer, A., Rasmussen, L. & 11 others, , 2024, In: Molecular Ecology. 33, 2, 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Water quality in a shallow eutrophic lake is unaffected by extensive thinning of planktivorous and benthivorous fish species
Polauke, E., Sø, Jonas Stage, Carl, Henrik, Møller, Peter Rask, Reitzel, K., Sand-Jensen, Kaj & Kragh, T., 2024, In: Journal of Environmental Management. 356Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High germline mutation rates, but not extreme population outbreaks, influence genetic diversity in a keystone coral predator
Popovic, I., Bergeron, Lucie Adrienne, Bozec, Y. M., Waldvogel, A. M., Howitt, S. M., Damjanovic, K., Patel, F., Cabrera, M. G., Wörheide, G., Uthicke, S. & Riginos, C., 2024, In: PLOS Genetics. 20, 2, 22 p., e1011129.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Predicting peptide–MHC stability and immunogenicity with deep learning
Prachar, Marek, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 258 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Environmental DNA metabarcoding of Danish soil samples reveals new insight into the hidden diversity of eutardigrades in Denmark
Pust, F. L., Frøslev, Tobias Guldberg, Kristensen, Reinhardt Møbjerg & Møbjerg, Nadja, 2024, In: Zoological Journal of the Linnean Society. 200, 1, p. 20-33Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population structure and migration in the Eastern Highlands of Papua New Guinea, a region impacted by the kuru epidemic
Quinn, Liam James Elgaard, Whitfield, J., Alpers, M. P., Campbell, T., Hummerich, H., Pomat, W., Siba, P., Koki, G., Moltke, Ida, Collinge, J., Hellenthal, G. & Mead, S., 2024, In: American Journal of Human Genetics. 111, 4, p. 668-679 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nature Forest Reserves in Tanzania and their importance for conservation
Ract, C., Burgess, Neil David, Dinesen, Lars, Sumbi, P., Malugu, I., Latham, J., Anderson, L., Gereau, R. E., de Lima, M. G., Akida, A., Nashanda, E., Shabani, Z., Tango, Y., Mteleka, S., Silayo, D. S., Mwangi, J., Lyatuu, G., Platts, P. J. & Rovero, F., 2024, In: PLoS ONE. 19, 2, 15 p., e0281408.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Microbial-derived imidazole propionate links the heart failure-associated microbiome alterations to disease severity
Raju, S. C., Molinaro, A., Awoyemi, A., Jørgensen, S. F., Braadland, P. R., Nendl, A., Seljeflot, I., Ueland, P. M., McCann, A., Aukrust, P., Vestad, B., Mayerhofer, C., Broch, K., Gullestad, L., Lappegård, K. T., Halvorsen, B., Kristiansen, Karsten, Hov, J. R. & Trøseid, M., 2024, In: Genome Medicine. 16, 1, 12 p., 27.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nitrogen immobilization could link extreme winter warming events to Arctic browning
Rasmussen, Laura Helene, Danielsen, Birgitte Kortegaard, Elberling, Bo, Ambus, Per Lennart, Björkman, M. P., Rinnan, Riikka & Andresen, L. C., 2024, In: Soil Biology and Biochemistry. 191, 11 p., 109319.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Aspects of Neurovascular Signaling Mechanisms in Migraine
Rasmussen, Rikke Holm, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 129 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Facing Danger: Exploring Personality and Reactions of European Hedgehogs (Erinaceus europaeus) towards Robotic Lawn Mowers
Rasmussen, S. L., Schrøder, B. T., Berger, A., Macdonald, D. W., Pertoldi, C., Briefer, Elodie & Alstrup, A. K. O., 2024, In: Animals. 14, 1, 19 p., 2.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles
Rauluseviciute, I., Riudavets-puig, R., Blanc-mathieu, R., Castro-mondragon, J., Ferenc, K., Kumar, V., Lemma, R. B., Lucas, J., Chèneby, J., Baranasic, D., Khan, A., Fornes, O., Gundersen, S., Johansen, M., Hovig, E., Lenhard, B., Sandelin, Albin Gustav, Wasserman, W., Parcy, F. & Mathelier, A., 2024, In: Nucleic Acids Symposium Series. 52, D1, p. D174–D182 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deciphering unique and shared interactions between the human gut microbiota and oral antidiabetic drugs
Ren, H., Shi, Z., Yang, F., Wang, S., Yuan, F., Li, T., Li, M., Zhu, J., Li, J., Wu, K., Zhang, Y., Ning, G., Kristiansen, Karsten, Wang, W., Gu, Y. & Zhong, H., 2024, In: iMeta. 3, 2, 9 p., e179.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Microeukaryotic plankton evolutionary constraints in a subtropical river explained by environment and bacteria along differing taxonomic resolutions
Ren, K., Mo, Y., Xiao, P., Rønn, Regin, Xu, Z., Xue, Y., Chen, H., Rivera, W. L., Rensing, C. & Yang, J., 2024, In: ISME communications. 4, 1, 10 p., ycae026.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Regulation of polycystin-2 trafficking to and at the primary cilium in kidney epithelial cells
Rezi, Csenge Kata, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 188 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Meta‐analysis Contrasting Freshwater Biodiversity in Forests and Oil Palm Plantations with and without Riparian Buffers
Rojas‐Castillo, O. A., Kepfer Rojas, Sebastian, Juen, L., Fogaça De Assis Montag, L., Carvalho, F. G., Mendes, T. P., Chua, K. W. J., Wilkinson, C. L., Amal, M. N. A., Fahmi‐Ahmad, M. & Jacobsen, Dean, 2024, In: Conservation Biology. 38, 1, p. 1-14 14 p., e14172.Research output: Contribution to journal › Review › Research › peer-review
- Published
Flagellar interference with plasmid uptake in biofilms: a joint experimental and modeling study
Røder, Henriette Lyng, Christidi, E., Amador Hierro, Cristina Isabel, Music, S., Olesen, Asmus Kalckar, Svensson, B., Madsen, Jonas Stenløkke, Herschend, J., Kreft, J. & Burmølle, Mette, 2024, In: Applied and Environmental Microbiology. 90, 1, 15 p., e01510-23.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecies interactions in dairy biofilms drive community structure and response against cleaning and disinfection
Sadiq, F. A., De Reu, K., Yang, Nan, Burmølle, Mette & Heyndrickx, M., 2024, In: Biofilm. 7, 13 p., 100195.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of dairy products on liver fat and metabolic risk markers in males with abdominal obesity – a four-arm randomized controlled trial
Sandby, Karoline, Magkos, Faidon, Chabanova, E., Petersen, E. T., Krarup, T., Bertram, H. C., Kristiansen, Karsten & Geiker, Nina Rica Wium, 2024, In: Clinical Nutrition. 43, 2, p. 534-542Research output: Contribution to journal › Journal article › Research › peer-review
- Published
GWAS of lipids in Greenlanders finds association signals shared with Europeans and reveals an independent PCSK9 association signal
Senftleber, N. K., Andersen, M. K., Jørsboe, E., Stæger, Frederik Filip Vinggaard, Nøhr, A. K., Garcia Erill, Genís, Meisner, Jonas, Santander, Cindy, Balboa, Renzo Fidel Ferdinando, Gilly, A., Bjerregaard, P., Larsen, C. V. L., Grarup, Niels, Jørgensen, M. E., Zeggini, E., Moltke, Ida, Hansen, Torben & Albrechtsen, Anders, 2024, In: European Journal of Human Genetics. 32, p. 215–223 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Complexity of avian evolution revealed by family-level genomes
Stiller, J., Feng, S., Chowdhury, A-A., Rivas-González, I., Duchêne, D. A., Fang, Q., Deng, Y., Kozlov, A., Stamatakis, A., Claramunt, S., Nguyen, J. M. T., Ho, S. Y. W., Faircloth, B. C., Haag, J., Houde, P., Cracraft, J., Balaban, M., Mai, U., Chen, G., Gao, R. & 32 others, , 1 Apr 2024, In: Nature.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hourly methane and carbon dioxide fluxes from temperate ponds
Sø, Jonas Stage, Martinsen, Kenneth Thorø, Kragh, T. & Sand-Jensen, Kaj, 2024, In: Biogeochemistry. 167, p. 177-195 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The use of biomimetic surfaces to reduce single- and dual-species biofilms of Escherichia coli and Pseudomonas putida
Teixeira-Santos, R., Azevedo, A., Romeu, M. J., Amador Hierro, Cristina Isabel, Gomes, L. C., Whitehead, K. A., Sjollema, J., Burmølle, Mette & Mergulhão, F. J., 2024, In: Biofilm. 7, 13 p., 100185.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational ensembles of the human intrinsically disordered proteome
Tesei, Giulio, Trolle, A. I., Jonsson, Nicolas, Betz, J., Knudsen, F. E., Pesce, Francesco, Johansson, Kristoffer Enøe & Lindorff-Larsen, Kresten, 2024, In: Nature. 626, p. 897-904 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lipid shape and packing are key for optimal design of pH-sensitive mRNA lipid nanoparticles
Tesei, Giulio, Hsiao, Y. W., Dabkowska, A., Grönberg, G., Yanez Arteta, M., Ulkoski, D., Bray, D. J., Trulsson, M., Ulander, J., Lund, M. & Lindfors, L., 2024, In: Proceedings of the National Academy of Sciences of the United States of America. 121, 2, 11 p., e2311700120.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Molecular switching in transcription through splicing and proline-isomerization regulates stress responses in plants
Theisen, Frederik Friis, Prestel, Andreas, Elkjær, Steffie Martina H, Leurs, Y. H. A., Morffy, N., Strader, L. C., O'Shea, Charlotte, Teilum, Kaare, Kragelund, Birthe Brandt & Skriver, Karen, 2024, In: Nature Communications. 15, 1, 13 p., 592.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Integrating coarse-grained molecular dynamics simulations with small-angle X-ray scattering data to characterize multidomain proteins and their assemblies
Thomasen, Emil, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 205 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Investigations on Microbes Attached to the Cuticle of Phytonematodes
Topalovic, Olivera, Radaković, Z. S., Elhady, A., Bredenbruch, S. & Heuer, H., 2024, Plant-Nematode Interactions. Molinari, S. (ed.). Vol. 2756. p. 257-270 14 p. (Methods in molecular biology (Clifton, N.J.)).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Cytotoxicity of Prymnesium parvum extracts and prymnesin analogs on epithelial fish gill cells RTgill‑W1 and the human colon cell line HCEC‑1CT
Varga, E., Prause, H., Riepl, M., Hochmayr, N., Berk, D., Attakpah, E., Kiss, E., Medic, Nikola, Del Favero, G., Larsen, T. O., Hansen, Per Juel & Marko, D., 2024, In: Archives of Toxicology. 98, p. 999–1014 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CI:Mor interactions in the lysogeny switches of Lactococcus lactis TP901-1 and Staphylococcus aureus φ13 bacteriophages
Varming, A. K., Huang, Zhiyu, Hamad, G. M., Rasmussen, K. K., Ingmer, Hanne, Kilstrup, M. & Lo Leggio, Leila, 2024, In: Microbiome Research Reports. 3, 2, 16 p., 15.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Editorial: Microbial fermentation for improved sensory properties and functionality of sustainable foods
Verni, M., Holt, Sylvester & Rizzello, C. G., 2024, In: Frontiers in Microbiology. 15, 2 p., 1387745.Research output: Contribution to journal › Editorial › Research › peer-review
- Published
Gut microbiota signatures in inflammatory bowel disease
Vestergaard, M. V., Allin, K. H., Eriksen, C., Zakerska-Banaszak, O., Arasaradnam, R. P., Alam, M. T., Kristiansen, Karsten, Brix, S. & Jess, T., 2024, In: United European Gastroenterology Journal. 12, 1, p. 22-33 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comment on “DpCoA tagSeq: Barcoding dpCoA-Capped RNA for Direct Nanopore Sequencing via Maleimide-Thiol Reaction”
Vinther, Jeppe, 2024, In: Analytical Chemistry. 96, 1, p. 606-609 4 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
In situ incubation of iron(II)-bearing minerals and Fe(0) reveals insights into metabolic flexibility of chemolithotrophic bacteria in a nitrate polluted karst aquifer
Visser, A. N., Martin, Joseph Donald, Osenbrück, K., Rügner, H., Grathwohl, P. & Kappler, A., 2024, In: Science of the Total Environment. 926, 16 p., 172062.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation
Wang, D., Yang, X., Ren, Z., Hu, B., Zhao, H., Yang, K., Shi, P., Zhang, Z., Feng, Q., Nawenja, C. V., Obanda, V., Robert, K., Nalikka, B., Waruhiu, C. N., Ochola, G. O., Onyuok, S. O., Ochieng, H., Li, B., Zhu, Y., Si, H. & 9 others, , 2024, In: Microbiome. 12, 1, 17 p., 72.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DeepLocRNA: an interpretable deep learning model for predicting RNA subcellular localization with domain-specific transfer-learning
Wang, Jun, Horlacher, M., Cheng, L. & Winther, Ole, 2024, In: Bioinformatics. 40, 2, 10 p., btae065.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Myotubularin-related-protein-7 inhibits mutant (G12V) K-RAS by direct interaction
Weidner, P., Saar, D., Söhn, M., Schroeder, T., Yu, Y., Zöllner, F. G., Ponelies, N., Zhou, X., Zwicky, A., Rohrbacher, F. N., Pattabiraman, V. R., Tanriver, M., Bauer, A., Ahmed, H., Ametamey, S. M., Riffel, P., Seger, R., Bode, J. W., Wade, R. C., Ebert, M. P. A. & 2 others, , 2024, In: Cancer Letters. 588, 19 p., 216783.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
ETV2 induces endothelial, but not hematopoietic, lineage specification in birds
Weng, W., Deng, Y., Deviatiiarov, R., Hamidi, S., Kajikawa, E., Gusev, O., Kiyonari, H., KU, thw266 & Sheng, G., 2024, In: Life Science Alliance. 7, 6, 12 p., e202402694.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Postembryonic development and male paedomorphosis in Osedax (Siboglinidae, Annelida)
Worsaae, Katrine, Rouan, Alice Jeanne Monique Nadja, Seaver, E., Miyamoto, N. & Tilic, E., 2024, In: Frontiers in Neuroscience. 18, 18 p., 1369274.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Using Nanopore Sequencing Deciphering Antibiotic Resistance Dissemination In The Wastewater Systems
Wu, Bruce, 2024, Department of Biology, Faculty of Science, University of Copenhagen. 185 p.Research output: Book/Report › Ph.D. thesis › Research
- E-pub ahead of print
Hypoxia in tomato (Solanum lycopersicum) fruit during ripening: Biophysical elucidation by a 3D reaction–diffusion model
Xiao, H., Verboven, P., Tong, Shuai, Pedersen, Ole & Nicolaï, B., 2024, (E-pub ahead of print) In: Plant Physiology.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spatial chromatin accessibility sequencing resolves high-order spatial interactions of epigenomic markers
Xie, Y., Ruan, F., Li, Y., Luo, M., Zhang, C., Chen, Z., Xie, Z., Weng, Z., Chen, W., Chen, W., Fang, Y., Sun, Y., Guo, M., Wang, J., Xu, S., Wang, H. & Tang, C., 2024, In: eLife. 12, 20 p., RP87868.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecific interactions facilitate keystone species in a multispecies biofilm that promotes plant growth
Yang, Nan, Røder, Henriette Lyng, Wicaksono, W. A., Wassermann, B., Russel, J., Li, Xuan Ji, Nesme, Joseph, Berg, G., Sørensen, Søren Johannes & Burmølle, Mette, 2024, In: The ISME Journal. 18, 1, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interphylum dissemination of NDM-5-positive plasmids in hospital wastewater from Fuzhou, China: a single-centre, culture-independent, plasmid transmission study
Yang, Q. E., Ma, X., Zeng, L., Wang, Q., Li, M., Teng, L., He, M., Liu, C., Zhao, M., Wang, M., Hui, D., Madsen, Jonas Stenløkke, Liao, H., Walsh, T. R. & Zhou, S., 2024, In: The Lancet Microbe. 5, 1, p. e13-e23 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circle-seq based method for eccDNA synthesis and its application as a canonical promoter independent vector for robust microRNA overexpression
Yu, J., Zhang, H., Han, Peng, Jiang, X., Li, J., Li, B., Yang, S., He, C., Mao, S., Dang, Y. & Xiang, X., 2024, In: Computational and Structural Biotechnology Journal. 23, p. 358-368 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Insights into the circular: The cryptic plasmidome and its derived antibiotic resistome in the urban water systems
Yu, Z., He, Wanli, Klincke, F., Madsen, Jonas Stenløkke, Kot, Witold, Hansen, Lars Hestbjerg, Quintela-Baluja, M., Balboa, S., Dechesne, A., Smets, B., Nesme, Joseph & Sørensen, Søren Johannes, 2024, In: Environment International. 183, 12 p., 108351.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Lake food web structure in Teici Nature reserve, Latvia: fish presence shapes functioning of pristine bog lake food webs
Zagars, M., Christoffersen, Kirsten Seestern & Cremona, F., 2024, (E-pub ahead of print) In: Hydrobiologia.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cholesterol-binding motifs in STING that control endoplasmic reticulum retention mediate anti-tumoral activity of cholesterol-lowering compounds
Zhang, B. C., Laursen, M. F., Hu, L., Hazrati, H., Narita, R., Jensen, L. S., Hansen, A. S., Huang, J., Zhang, Y., Ding, X., Muyesier, M., Nilsson, E., Banasik, A., Zeiler, C., Mogensen, T. H., Etzerodt, A., Agger, R., Johannsen, M., Kofod-Olsen, E., Paludan, S. R. & 1 others, , 2024, In: Nature Communications. 15, 1, 17 p., 2760.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Herbivore dung deposition increases soil respiration through elevated substrate availability and microbial biomass
Zhang, Z., Zhang, S. & Rinnan, Riikka, 2024, In: Applied Soil Ecology. 194, 10 p., 105203.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fine roots and extramatrical mycelia regulate the composition of soil organic carbon and nitrogen in a subtropical montane forest
Zhao, X., Tian, Q., Michelsen, Anders, Chen, L., Yue, P., Feng, Z., Lin, Q., Zhao, R. & Liu, F., 2024, In: Forest Ecology and Management. 554, 8 p., 121661.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Home-field advantage of litter decomposition differs among leaves, absorptive roots, and transport roots
Zhao, X., Tian, Q., Michelsen, Anders, Lin, Q., Yuan, X., Chen, L., Lu, M., Jiang, Q., Zhao, R. & Liu, F., 2024, (E-pub ahead of print) In: Plant and Soil.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
PAT mRNA decapping factors are required for proper development in Arabidopsis
Zuo, Zhangli Thomsen, Roux, M. E., Dagdas, Y. F., Rodriguez, Eleazar & Petersen, M., 2024, (E-pub ahead of print) In: FEBS Letters.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population Genomics Reveals the Underlying Structure of the Small Pelagic European Sardine and Suggests Low Connectivity within Macaronesia
Rodrigues da Fonseca, Rute Andreia, Campos, P. F., Rey de la Iglesia, Alba, Barroso, G. V., Bergeron, Lucie Adrienne, Nande, M., Tuya, F., Abidli, S., Pérez, M., Riveiro, I., Carrera, P., Jurado-Ruzafa, A., Santamaría, M. T. G., Faria, R., Machado, A. M., Fonseca, M. M., Froufe, E. & Castro, L. F. C., 2024, In: Genes. 15, 2, 15 p., 170.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Frost damage measured by electrolyte leakage in subarctic bryophytes increases with climate warming
van Zuijlen, K., Kassel, M., Dorrepaal, E. & Lett, Signe, 2024, In: Journal of Ecology. 112, 2, p. 220-232 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
The Origins of All Things
A.T. Harper, D. (ed.) & Seberg, Ole (ed.), 2023, 1 ed. Copnhagen: Munksgaard . 447 p.Research output: Book/Report › Book › Education
- Published
Risk factors for and pregnancy outcomes after SARS-CoV-2 in pregnancy according to disease severity: A nationwide cohort study with validation of the SARS-CoV-2 diagnosis
Aabakke, A. J. M., Petersen, T. G., Wøjdemann, K., Ibsen, M. H., Jonsdottir, F., Rønneberg, E., Andersen, C. S., Hammer, A., Clausen, T. D., Milbak, J., Burmester, L., Zethner, R., Lindved, B., Thorsen-Meyer, A., Khalil, M. R., Henriksen, B., Jønsson, L., Andersen, L. L. T., Karlsen, K. K., Pedersen, M. L. & 19 others, , 2023, In: Acta Obstetricia et Gynecologica Scandinavica. 102, 3, p. 282–293 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Searches for Neutrinos from Large High Altitude Air Shower Observatory Ultra-high-energy γ-Ray Sources Using the IceCube Neutrino Observatory
Abbasi, R., Ackermann, M., Adams, J., Aggarwal, N., Aguilar, J. A., Ahlers, M., Alameddine, J. M., Alves, A. A., Amin, N. M., Andeen, K., Anderson, T., Anton, G., Argüelles, C., Ashida, Y., Athanasiadou, S., Axani, S. N., Bai, X., Balagopal, V. A., Baricevic, M., Barwick, S. W. & 369 others, , 2023, In: Astrophysical Journal Letters. 945, 1, 11 p., L8.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oropharyngeal Microbiota Clusters in Children with Asthma or Wheeze Associate with Allergy, Blood Transcriptomic Immune Pathways, and Exacerbation Risk
U-BIOPRED Study Group, U. S. G., 2023, In: American Journal of Respiratory and Critical Care Medicine. 208, 2, p. 142-154 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Where is the field of autophagy research heading?
Abeliovich, H., Debnath, J., Ding, W. X., Jackson, W. T., Kim, D. H., Klionsky, D. J., Ktistakis, N., Margeta, M., Münz, C., Petersen, Morten, Sadoshima, J. & Vergne, I., 2023, In: Autophagy. 19, 4, 6 p.Research output: Contribution to journal › Editorial › Research
- Published
HSP70-binding motifs function as protein quality control degrons
Abildgaard, A. B., Voutsinos, Vasileios, Petersen, S. D., Larsen, Fia Brunsgaard Valsted, Kampmeyer, Caroline, Johansson, Kristoffer Enøe, Stein, Amelie, Ravid, T., Andréasson, C., Jensen, M. K., Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2023, In: Cellular and Molecular Life Sciences. 80, 1, 17 p., 32.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lynch syndrome, molecular mechanisms and variant classification
Abildgaard, A. B., Nielsen, S., Bernstein, I., Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2023, In: British Journal of Cancer. 128, 9 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
- Published
Chemical Stimulation of Heterocyte Differentiation by the Feather Moss Hylocomium splendens: a Potential New Step in Plant-Cyanobacteria Symbioses
Alvarenga, Danillo Oliveira, Elmdam, I. V., Timm, A. B. & Rousk, Kathrin, 2023, In: Microbial Ecology. 86, p. 419-430 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oral administration of helminth fluid modulates distinct tuft cell and immune-metabolic cues linked to reduced body fat
Andersen, D., Moll, J. M., Arora, P., Danneskiold-Samsøe, Niels Banhos, Sonne, Si Brask, Workman, C. T., Williams, Andrew Richard, Kristiansen, Karsten & Brix, S., 2023, In: Parasite Immunology. 45, 7, 12 p., e12998.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Landskabsanalyse for Gudenådalen: Pilotprojekt i forbindelse med Helhedsplan for Gudenåen
Andersen, Erling, Andersen, Peter Stubkjær, Folvig, Sara, Jensen, M., Jessen, Mette Juhl, Larsen, K. C., Løffler, L., Munck Petersen, Rikke & Vejre, Henrik, 2023, Institut for Geovidenskab og Naturforvaltning, Københavns Universitet. 155 p. (IGN Rapport; No. marts 2023).Research output: Book/Report › Report › Research
- Published
Moderate nitrogen retention in temperate heath ecosystem after elevated CO2, drought and warming through 7 years
Andresen, L. C., Ambus, Per Lennart, Beier, Claus & Michelsen, Anders, 2023, In: European Journal of Soil Science. 74, 4, 13 p., e13397.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
New Echinoderes (Kinorhyncha Cyclorhagida) from Mexico: Molecular barcoding demonstrate species delimitation between highly similar morphospecies
Escalante, Abril Anguas, Herranz, Maria, Martínez-Arce, A., De Jesús-Navarrete, A. & Sørensen, Martin Vinther, 2023, In: Zoologischer Anzeiger. 302, p. 146-165 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The promoters of OsGLP genes exhibited differentially methylated sites under drought and salt stress in rice cultivars
Anum, J., O’Shea, C., Skriver, Karen, Saeed, M., Hyder, M. Z., Farrakh, S. & Yasmin, T., 2023, In: Euphytica. 219, 4, 15 p., 42.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The prolactin receptor scaffolds Janus kinase 2 via co-structure formation with phosphoinositide-4,5-bisphosphate
Araya-Secchi, R., Bugge, K., Seiffert, P., Petry, A., Haxholm, G. W., Lindorff-Larsen, Kresten, Pedersen, Stine Helene Falsig, Arleth, Lise & Kragelund, Birthe Brandt, 2023, In: eLife. 12, 27 p., e84645.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Glucose Controls Glucagon Secretion by Regulating Fatty Acid Oxidation in Pancreatic α-Cells
Armour, Sarah Louise, Frueh, A., Chibalina, M. V., Dou, H., Argemi Muntadas, Lidia, Hamilton, Alexander, Katzilieris Petras, Georgios, Carmeliet, P., Davies, B., Moritz, Thomas, Eliasson, L., Rorsman, P. & Knudsen, Jakob Grunnet, 2023, In: Diabetes. 72, 10, p. 1446-1459 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolic regulation of glucagon secretion
Armour, Sarah Louise, Stanley, J. E., Cantley, J., Dean, E. D. & Knudsen, Jakob Grunnet, 2023, In: The Journal of endocrinology. 259, 1, 15 p., e230081.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
More warm-adapted species in soil seed banks than in herb layer plant communities across Europe
Auffret, A. G., Vangansbeke, P., De Frenne, P., Auestad, I., Basto, S., Grandin, U., Jacquemyn, H., Jakobsson, A., Kalamees, R., Koch, M. A., Marrs, R., Marteinsdóttir, B., Wagner, M., Bekker, R. M., Bruun, H. H., Decocq, G., Hermy, M., Jankowska-Błaszczuk, M., Milberg, P., Måren, I. E. & 6 others, , 2023, In: Journal of Ecology. 111, 5, 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Do Nitrogen and Phosphorus Additions Affect Nitrogen Fixation Associated with Tropical Mosses?
Avila Clasen, Lina, Permin, Aya Tora Foged, Horwath, A. B., Metcalfe, D. B. & Rousk, Kathrin, 2023, In: Plants. 12, 7, 13 p., 1443.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolic effects of diet containing blue mussel (Mytilus edulis) and blue mussel-fed salmon in a mouse model of obesity
Azad, A. M., Bernhard, A., Shen, A., Myrmel, L. S., Lundebye, A., Lecaudey, L. A., Fjære, E., Tri Ho, Q., Sveier, H., Kristiansen, Karsten, Limborg, Morten Tønsberg & Madsen, L., 2023, In: Food Research International. 169, 11 p., 112927.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Examination of the Regulation and Function of TopBP1 during Mitotic DNA Repair
Bagge, J., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 124 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
The Role of ZGRF1 in Recombinational Repair and Telomere Stability Maintenance
Bagge, Keerthana Stine Viswalingam, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 179 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
On the origin of regulatory elements: Computational analyses of transposable elements in pluripotency and development
Bakoulis, Stylianos, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 135 p.Research output: Book/Report › Ph.D. thesis › Research
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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Complexity of avian evolution revealed by family-level genomes
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