Department of Biology

 

 
  1. 2021
  2. Published

    Morphological and genetic analyses of Ostreopsis (Dinophyceae, Gonyaulacales, Ostreopsidaceae) species from Vietnamese waters with a re-description of the type species, O. siamensis

    Nguyen-Ngoc, L., Doan-Nhu, H., Larsen, Jacob, Phan-Tan, L., Nguyen, X., Lundholm, Nina, Chu, T. V. & Huynh-Thi, D. N., 2021, In: Journal of Phycology. 57, 3, p. 1059-1083

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Establishment of heterochromatin in domain-size-dependent bursts

    Nickels, Jan Fabio, Edwards, A. K., Charlton, Sebastian Jespersen, Mortensen, A. M., Hougaard, S. C. L., Trusina, Ala, Sneppen, Kim & Thon, Genevieve, 13 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 15, 11 p., e2022887118.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Neuropeptide expression in the box jellyfish Tripedalia cystophora - New insights into the complexity of a "simple" nervous system

    Nielsen, S. K. D., Koch, Thomas Lund, Wiisbye, S. H., Grimmelikhuijzen, Cornelis (Cok) & Garm, Anders Lydik, 2021, In: Journal of Comparative Neurology. 529, 11, p. 2865-2882 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    The Cubozoan Nervous System: From Neuropeptides to Learning Formation in the Box Jellyfish Tripedalia cystophora

    Nielsen, S. K. D., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 246 p.

    Research output: Book/ReportPh.D. thesisResearch

  6. Published

    Multiplexed assays reveal effects of missense variants in MSH2 and cancer predisposition

    Nielsen, S. V., Hartmann-Petersen, Rasmus, Stein, Amelie & Lindorff-Larsen, Kresten, 2021, In: PLOS Genetics. 17, 4, 6 p., e1009496.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Drier, darker and more fertile: 140 years of plant habitat change driven by land-use intensification

    Nielsen, T. F., Sand-Jensen, Kaj & Bruun, Hans Henrik, 2021, In: Journal of Vegetation Science. 32, 4, 16 p., e13066.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    The complete genome of 2,6-dichlorobenzamide (BAM) degrader Aminobacter sp. MSH1 suggests a polyploid chromosome, phylogenetic reassignment, and functions of plasmids

    Nielsen, Tue Kjærgaard, Horemans, B., Lood, C., T’Syen, J., van Noort, V., Lavigne, R., Ellegaard-Jensen, L., Hylling, Ole, Aamand, J., Springael, D. & Hansen, Lars Hestbjerg, 2021, In: Scientific Reports. 11, 12 p., 18943.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Mapping the human genetic architecture of COVID-19

    Niemi, M. E. K., Karjalainen, J., Liao, R. G., Neale, B. M., Daly, M., Ganna, A., Pathak, G. A., Andrews, S. J., Kanai, M., Veerapen, K., Fernandez-Cadenas, I., Schulte, E. C., Striano, P., Marttila, M., Minica, C., Marouli, E., Karim, M. A., Wendt, F. R., Savage, J., Sloofman, L. & 41 others, Butler-Laporte, G., Kim, H., Kanoni, S., Okada, Y., Byun, J., Han, Y., Uddin, M. J., Smith, G. D., Willer, C. J., Buxbaum, J. D., Karjalainen, J., Mehtonen, J., Folkersen, L., Moltke, Ida, Hinney, A., Wang, C., Ellinghaus, D., Brunak, Søren, Castro, P., Guindo Martínez, Marta, Lee, J. Y., Loos, Ruth, Zhao, J. H., Sun, Y. V., Wang, B., Parker, R., Garcia, S. M., Smith, O., Davis, C., COVID-19 Host Genetics Initiative, C. H. G. I., 23andMe COVID-19 Team, 2. C. T., Norwegian SARS-CoV-2 Study Grp, N. S. S. G., Humanitas COVID-19 Task Force, H. C. T. F., Humanitas Gavazzeni COVID-19 Task, H. G. C. T., FHoGID, F., RegCOVID, R., P-PredictUs, P., SeroCOVID, S., CRiPSI, C., Genes & Hlth Res Team, G. &. H. R. T. & UCLA Hlth ATLAS Data Mart Working, U. H. A. D. M. W., 2021, In: Nature. 600, p. 472-477

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Improved metagenome binning and assembly using deep variational autoencoders

    Nissen, J. N., Johansen, Joachim, Allesoe, R. L., Sonderby, C. K., Armenteros, J. J. A., Grønbech, Christopher Heje, Jensen, Lars Juhl, Nielsen, H. B., Petersen, T. N., Winther, Ole & Rasmussen, Simon, 2021, In: Nature Biotechnology. 39, p. 555-560

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Co-option of immune effectors by the hormonal signalling system triggering metamorphosis in Drosophila melanogaster

    Nunes, C., Koyama, Takashi & Sucena, É., 2021, In: PLOS Genetics. 17, 11, 24 p., e1009916.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Endocrine regulation of immunity in insects

    Nunes, C., Sucena, É. & Koyama, Takashi, 2021, In: FEBS Journal. 288, 13, p. 3928-3947 20 p.

    Research output: Contribution to journalReviewResearchpeer-review

  13. Published

    De vigtigste levesteder for rødlistede arter i Danmark

    Nygaard, B., Moeslund, J. E., Ejrnæs, R., Mielec, C. L., Carl, H., Clausen, K. K., Dylmer, E., Elmeros, M., Flensted, K., Fog, K., Goldberg, I., Hansen, M. D. D., Helsing, F., Jørum, P., Lissner, J., Læssøe, T., Madsen, H. B., Misser, J., Olsen, K., Søchting, U. & 2 others, Wiberg-Larsen, P. & Wind, P., 2021, Aarhus Universitet, DCE – Nationalt Center for Miljø og Energi. 120 p. (Videnskabelig rapport fra DCE – Nationalt Center for Miljø og Energi; No. 470).

    Research output: Book/ReportReportResearchpeer-review

  14. Published

    A large-scale genome-wide gene expression analysis in peripheral blood identifies very few differentially expressed genes related to antidepressant treatment and response in patients with major depressive disorder

    Nøhr, A. K., Lindow, M., Forsingdal, A., Demharter, S., Nielsen, T., Buller, R., Moltke, Ida, Vitezic, M. & Albrechtsen, Anders, 2021, In: Neuropsychopharmacology. 46, 7, p. 1324-1332 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    NGSremix: A software tool for estimating pairwise relatedness between admixed individuals from next-generation sequencing data

    Nøhr, A. K., Hanghøj, Kristian Ebbesen, Garcia Erill, Genís, Li, Zilong, Moltke, Ida & Albrechtsen, Anders, 2021, In: G3: Genes, Genomes, Genetics. 11, 8, 8 p., jkab174.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Predictors and trajectories of treatment response to SSRIs in patients suffering from PTSD

    Nøhr, A. K., Eriksson, H., Hobart, M., Moltke, Ida, Buller, R., Albrechtsen, Anders & Lindgreen, S., 2021, In: Psychiatry Research. 301, 8 p., 113964.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Levels of omega 3 fatty acids, vitamin D, dioxins and dioxin-like PCBs in oily fish: a new perspective on the reporting of nutrient and contaminant data for risk–benefit assessments of oily seafood

    Nøstbakken, O. J., Rasinger, J. D., Hannisdal, R., Sanden, M., Frøyland, L., Duinker, A., Frantzen, S., Dahl, L. M., Lundebye, A. & Madsen, L., 2021, In: Environment International. 147, 11 p., 106322.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Testing cophylogeny between coral reef invertebrates and their bacterial and archaeal symbionts

    O'Brien, P. A., Andreakis, N., Tan, S., Miller, D. J., Webster, N. S., KU, thw266 & Bourne, D. G., 2021, In: Molecular Ecology. 30, 15, p. 3768-3782 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Comparative bioacoustics: a roadmap for quantifying and comparing animal sounds across diverse taxa

    Odom, K. J., Araya-Salas, M., Morano, J. L., Ligon, R. A., Leighton, G. M., Taff, C. C., Dalziell, A. H., Billings, A. C., Germain, Ryan Ross, Pardo, M., de Andrade, L. G., Hedwig, D., Keen, S. C., Shiu, Y., Charif, R. A., Webster, M. S. & Rice, A. N., 2021, In: Biological Reviews. 96, 4, p. 1135-1159 25 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    N-acetylcysteine protects ovarian follicles from ischemia-reperfusion injury in xenotransplanted human ovarian tissue

    Olesen, H. Ø., Pors, S. E., Jensen, L. B., Grønning, A. P., Lemser, C. E., Heimbürger, M. T. H. N., Mamsen, L. S., Getreu, N., Christensen, Søren Tvorup, tcg964, tcg964 & Kristensen, S. G., 2021, In: Human Reproduction. 36, 2, p. 429-443 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Environmental and Pathogenic Carbapenem Resistant Bacteria Isolated from a Wastewater Treatment Plant Harbour Distinct Antibiotic Resistance Mechanisms

    Oliveira, M., Leonardo, I. C., Nunes, M., Silva, A. F. & Barreto Crespo, M. T., 2021, In: Antibiotics. 10, 9, 13 p., 1118.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Correlated transcriptional responses provide insights into the synergy mechanisms of the furazolidone, vancomycin, and sodium deoxycholate triple combination in escherichia coli

    Olivera, Catrina Diane Peralta, Cox, M. P., Rowlands, G. J. & Rakonjac, J., 2021, In: mSphere. 6, 5, 14 p., e00627-21.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Ab initio determination of the shape of membrane proteins in a nanodisc

    Orioli, S., Hansen, C. G. H. & Arleth, Lise, 2021, In: Acta crystallographica Section D: Structural biology . 77, p. 176-193 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    netDx: Software for building interpretable patient classifiers by multi-'omic data integration using patient similarity networks [version 2; peer review: 2 approved]

    Pai, S., Weber, P., Isserlin, R., Kaka, H., Hui, S., Shah, M. A., Giudice, L., Giugno, R., Nøhr, A. K., Baumbach, J. & Bader, G. D., 2021, In: F1000Research. 9, 42 p., 1239.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Drosophila TNFRs Grindelwald and Wengen bind Eiger with different affinities and promote distinct cellular functions

    Palmerini, V., Monzani, S., Laurichesse, Quentin Charles B, Loudhaief, Rihab, Mari, S., Cecatiello, V., Olieric, V., Pasqualato, S., Colombani, Julien, Andersen, Ditte Skovaa & Mapelli, M., 2021, In: Nature Communications. 12, 12 p., 2070.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Modes of genetic adaptations underlying functional innovations in the rumen

    Pan, X., Cai, Y., Li, Z., Chen, X., Heller, R., Wang, N., Wang, Y., Zhao, C., Wang, Y., Xu, H., Li, S., Li, M., Li, C., Hu, S., Li, H., Wang, K., Chen, L., Wei, B., Zheng, Z., Fu, W. & 20 others, Yang, Y., Zhang, T., Hou, Z., Yan, Y., Lv, X., Sun, W., Li, X., Huang, S., Liu, L., Mao, S., Liu, W., Hua, J., Li, Z., KU, thw266, Chen, Y., Wang, X., Qiu, Q., Dalrymple, B. P., Wang, W. & Jiang, Y., 2021, In: Science China Life Sciences. 64, 1, p. 1-21 21 p.

    Research output: Contribution to journalJournal articleResearchpeer-review