Department of Biology

 

 
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  1. Published

    Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D. M. & Fiore, M. F., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 5, 12 p., 004811.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Aminobacter MSH1-mineralisation of BAM in sand-filters depends on biological diversity

    Ekelund, Flemming, Harder, Christoffer Bugge, Knudsen, B. E. & Aamand, J., 2015, In: P L o S One. 10, 6, 14 p., e0128838.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Bacillus halodurans strain C125 encodes and synthesizes enzymes from both known pathways to form dUMP directly from Cytosine Deoxyribonucleotides

    Oehlenschlæger, C. B., Løvgreen, M. N., Reinauer, E., Lehtinen, E., Pind, M. L., Harris, P., Martinussen, J. & Willemoës, Martin, 2015, In: Applied and Environmental Microbiology. 81, 10, p. 3395-3404 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Bacillus thuringiensis toxins divert progenitor cells toward enteroendocrine fate by decreasing cell adhesion with intestinal stem cells in Drosophila

    Jneid, Rouba, Loudhaief, Rihab, Zucchini-Pascal, N., Nawrot-Esposito, M. P., Fichant, A., Rousset, R., Bonis, M., Osman, D. & Gallet, A., 2023, In: eLife. 12, 34 p., e80179.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Bacillus velezensis SQR9 inhibition to fungal denitrification responsible for decreased N2O emissions from acidic soils

    Huang, Mengyuan, Zhang, Y., Wu, J., Wang, Y., Xie, Y., Geng, Y., Zhang, N., Michelsen, Anders, Li, S., Zhang, R., Shen, Q. & Zou, J., 2023, In: Science of the Total Environment. 885, 10 p., 163789.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Baffinella frigidus gen. et sp. nov. (Baffinellaceae fam. nov., Cryptophyceae) from Baffin Bay: morphology, pigment profile, phylogeny and growth rate response to three abiotic factors

    Daugbjerg, Niels, Norlin, A. & Lovejoy, C., Oct 2018, In: Journal of Phycology. 54, 5, p. 665-680 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Baldinia droopii sp. nov. (Suessiales, Dinophyceae), a new species from a small rainwater rock pool near Tvarminne, south-western Finland

    Hansen, Gert, Daugbjerg, Niels & Moestrup, Øjvind, 2023, In: Phycologia. 62, 1, 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Blastocystis in a Gut Microbiota Context and Aspects of Blastocystis Genomics

    Andersen, L. P. O., 2016, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  9. Published

    Butyribacter intestini gen. nov., sp. nov., a butyric acid-producing bacterium of the family Lachnospiraceae isolated from human faeces, and reclassification of Acetivibrio ethanolgignens as Acetanaerobacter ethanolgignens gen. nov., comb. nov

    Zou, Y., Xue, W., Lin, X., Lv, M., Luo, G., Dai, Y., Sun, H., Liu, S., Sun, C., Hu, T. & Xiao, L., 2021, In: Systematic and Applied Microbiology. 44, 3, 8 p., 126201.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    C-locked analogs of the antimicrobial peptide BP214

    Andersen, I. K. L., Thomsen, T. T., Rashid, J., Bobak, T. R., Oddo, A., Franzyk, Henrik, Løbner-Olesen, Anders & Hansen, Paul Robert, 2022, In: Antibiotics. 11, 8, 10 p., 1080.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Callithrix jacchus (the common marmoset)

    Yang, Chentao & KU, thw266, 2021, In: Trends in Genetics. 37, 10, p. 948-949 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  12. Published

    Caloplaca andina comb. nov. (Teloschistaceae, Ascomycota), a species close to the genus Fulgensia

    Scutari, N. C., Rosato, V. G. & Søchting, Ulrik, 2002, In: Mitteilungen aus dem Institut für Allgemeine Botanik, Hamburg. 30-32, p. 213-224

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Caloplaca thuringiaca sp. nov., a species from the Caloplaca holocarpa - complex

    Søchting, Ulrik & Stordeur, R., 2001, In: Lichenologist. 33, p. 467-472

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Camponotus floridanus ants incur a trade-off between phenotypic development and pathogen susceptibility from their mutualistic endosymbiont Blochmannia

    Sinotte, Veronica Marie, Freedman, S. N., Ugelvig, Line Vej & Seid, M. A., 2018, In: Insects. 9, 2, p. 1-14 58.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Catenarina (Teloschistaceae, Ascomycota), a new Southern Hemisphere genus with 7-chlorocatenarin

    Søchting, Ulrik, Søgaard, M. Z., Elix, J. A., Arup, U., Elvebakk, A. & Sancho, L. G., 2014, In: Lichenologist. 46, 2, p. 175-187 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Charcotiana and Amundsenia, two new genera in Teloschistaceae (lichenized Ascomycota, subfamily Xanthorioideae) hosting two new species from continental Antarctica, and Austroplaca frigida, a new name for a continental Antarctic species

    Søchting, Ulrik, Garrido-Benavent, I., Seppelt, R., Castello, M., Perez-Ortega, S., de los Rios Murillo, A., Sancho, L. G., Frödén, P. & Arup, U., 2014, In: Lichenologist. 46, 6, p. 763-782 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Cheilosia fasciata (Diptera: Syrphidae) new to Denmark

    Bruun, Hans Henrik & Bygebjerg, R., 2016, In: Entomologisk Tidskrift. 137, p. 131-135 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Chloranthus genome provides insights into the early diversification of angiosperms

    Guo, X., Fang, D., Sahu, S. K., Yang, S., Guang, X., Folk, R., Smith, S. A., Chanderbali, A. S., Chen, S., Liu, M., Yang, T., Zhang, S., Liu, X., Xu, X., Soltis, P. S., Soltis, D. E. & Liu, Huan, 2021, In: Nature Communications. 12, 14 p., 6930.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Cokhicum cupanii Guss. subsp glossophyllum (Heldr.) Rouy, Datura innoxia Mill. and Eclipta prostrata (L.) L., new floristic records in Montenegro and western Balkan

    Cakovic, D., Stesevic, D., Vuksanovic, S. & Tan, K., 2014, In: Acta Botanica Croatica. 73, 1, p. 255-265 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Cortinarius stjernegaardii and C. kristinae (Basidiomycota, Agaricales), two new European species with a mainly northern distribution

    Frøslev, Tobias Guldberg, Brandrud, T. E. & Dima, B., Feb 2017, In: Mycological Progress. 16, 2, p. 145-153 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Crystallicutis gen. nov. (Irpicaceae, Basidiomycota), including C. damiettensis sp. nov., found on Phoenix dactylifera (date palm) trunks in the Nile Delta of Egypt

    El-Gharabawy, H. M., A. Leal-Dutra, Caio & Griffith, G. W., 2021, In: Fungal Biology. 125, 6, p. 447-458 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    DNAJC6 mutations associated with early-onset Parkinson's disease

    Olgiati, S., Quadri, M., Fang, M., Rood, J. P. M. A., Saute, J. A., Chien, H. F., Bouwkamp, C. G., Graafland, J., Minneboo, M., Breedveld, G. J., Zhang, J., Verheijen, F. W., Boon, A. J. W., Kievit, A. J. A., Jardim, L. B., Mandemakers, W., Barbosa, E. R., Rieder, C. R. M., Leenders, K. L., Wang, J. & 1 others, Bonifati, V., 2016, In: Annals of Neurology. 79, 2, p. 244-256 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Dactylodinium pterobelotum gen. et sp. nov., a new marine woloszynskioid dinoflagellate positioned between the two families Borghiellaceae and Suessiaceae

    Takahashi, K., Moestrup, Øjvind, Wada, M., Ishimatsu, A., Nguyen, V. N., Fukuyo, Y. & Iwataki, M., Dec 2017, In: Journal of Phycology. 53, 6, p. 1223-1240 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    De novo pathway-based biomarker identification

    Alcaraz, N., List, M., Batra, R., Vandin, F., Ditzel, H. J. & Baumbach, J., 19 Sep 2017, In: Nucleic Acids Research. 45, 16, 11 p., e151.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    De novo assembly of a haplotype-resolved human genome

    Cao, H., Wu, H., Luo, R., Huang, S., Sun, Y., Tong, X., Xie, Y., Liu, B., Yang, H., Zheng, H., Li, J., Li, B., Wang, Y., Yang, F., Sun, P., Liu, S., Gao, P., Huang, H., Sun, J., Chen, D. & 21 others, He, G., Huang, W., Huang, Z., Li, Y., Tellier, L. C. A. M., Liu, X., Feng, Q., Xu, X., Zhang, X., Bolund, L., Krogh, Anders, Kristiansen, Karsten, Drmanac, R., Drmanac, S., Nielsen, R., Li, S., Wang, J., Yang, H., Li, Y., Wong, G. K. & Wang, J., 2015, In: Nature Biotechnology. 33, 6, p. 617-626 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    De novo whole-genome assembly and resequencing resources for the roan (Hippotragus equinus), an iconic African antelope

    Gonçalves, M., Siegismund, Hans Redlef, Van Vuuren, B. J., Koepfli, K., Ferrand, N. & Godinho, R., 2021, In: G3: Genes, Genomes, Genetics. 11, 2, 9 p., jkab002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Drosophila as a Model for Neuroendocrine Control of Renal Homeostasis

    Dow, J. A. T., Halberg, Kenneth Veland, Terhzaz, S. & Davies, S. A., 2018, Model Animals in Endocrinology: From Worms to Mouse to Man. Ludwig, M. & Levkowitz, G. (eds.). Newark: Wiley, 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  28. Published

    Drosophila Imp iCLIP identifies an RNA assemblage coordinating F-actin formation

    Hansen, H. T., Rasmussen, S. H., Adolph, S. K., Plass, M., Krogh, Anders, Sanford, J., Nielsen, Finn Cilius & Christiansen, Jan, 2015, In: Genome Biology (Online Edition). 16, 16 p., 123.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Drosophila TNF/TNFRs: At the crossroad between metabolism, immunity, and tissue homeostasis

    Colombani, Julien & Andersen, Ditte Skovaa, 2023, In: FEBS Letters. 597, 19, p. 2416-2432 17 p.

    Research output: Contribution to journal › Review › Research › peer-review

  30. Published

    Drosophila cytokine GBP2 exerts immune responses and regulates GBP1 expression through GPCR receptor Mthl10

    Ono, M., Matsumura, T., Sung, E. J., Koyama, Takashi, Ochiai, M., Shears, S. B. & Hayakawa, Y., 2024, In: Insect Biochemistry and Molecular Biology. 167, 7 p., 104086.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Ducatina umbilicata gen. et sp nov., a remarkable Trapeliaceae from the subantarctic islands in the Indian Ocean

    Ertz, D., Søchting, Ulrik, Gadea, A., Charrier, M. & Poulsen, R. S., Mar 2017, In: The Lichenologist. 49, 2, p. 127-140 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Escherichia coli belonging to ST131 rarely transfers blactx-m-15 to fecal Escherichia coli

    Thingholm, K. R., Hertz, F. B., Løbner-Olesen, Anders, Frimodt-Møller, N. & Nielsen, K. L., 2019, In: Infection and Drug Resistance. 12, p. 2429-2435

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Escherichia coli protein synthesis is limited by mRNA availability rather than ribosomal capacity during phosphate starvation

    Espinosa, R., Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2022, In: Frontiers in Microbiology. 13, 13 p., 989818.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Ex vivo Release of Calcitonin Gene-Related Peptide from the Trigeminovascular System in Rodents

    Rasmussen, R. H., Jansen-Olesen, I., Kristensen, D. M. & Christensen, S. L., 2022, In: Journal of Visualized Experiments. 183, 19 p., e63723.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    FUT2–ABO epistasis increases the risk of early childhood asthma and Streptococcus pneumoniae respiratory illnesses

    Ahluwalia, T. S., Eliasen, A. U., Sevelsted, A., Pedersen, C-E. T., Stokholm, J., Chawes, B., Bork-Jensen, J., Grarup, N., Pedersen, O., Hansen, T., Linneberg, A., Sharma, A., Weiss, S. T., Evans, M. D., Jackson, D. J., Morin, A., Krogfelt, K. A., Schjørring, S., Mortensen, P. B., Hougaard, D. M. & 13 others, Bybjerg-Grauholm, J., Bækvad-Hansen, M., Mors, O., Nordentoft, Merete, Børglum, A. D., Werge, Thomas, Agerbo, E., Gern, J. E., Lemanske, R. F., Ober, C., Pedersen, A. G., Bisgaard, H. & Bønnelykke, Klaus, 2020, In: Nature Communications. 11, 12 p., 6398.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Feldmannia Hamel, 1931-1939 Streblonema Derbés et Solier, 1851

    Pedersen, P. M., 2002, NEAS keys to benthic marine algae of the northeastern coast of North America from Long Island Sound to the Strait of Belle Isles (second edition). Massachusetts, USA: Northeast Algal Society, p. 61-63

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  37. Published

    Fragilariopsis (Bacillariophyceae) of the Northern hemisphere - morphology, taxonomy, phylogeny and distribution, with a description of F. pacifica sp. nov.

    Lundholm, Nina & Hasle, G. R., 2010, In: Phycologia. 49, 5, p. 438-460 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Gambierdiscus (gonyaulacales, dinophyceae) diversity in Vietnamese waters with description of G. vietnamensis sp. nov.

    Nguyen-Ngoc, L., Larsen, Jacob, Doan-Nhu, H., Nguyen, X. V., Chomérat, N., Lundholm, Nina, Phan-Tan, L., Dao, H. V., Nguyen, N. L., Nguyen, H. H. & Van Chu, T., 2023, In: Journal of Phycology. 59, 3, p. 496-517

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Giraffa camelopardalis

    Liu, C., Gao, J., Huang, J., Wang, W., Heller, Rasmus & Qiu, Q., 2021, In: Trends in Genetics. 37, 9, p. 860-861 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  40. Published

    Gymnodinium smaydae n. sp., a new planktonic phototrophic dinoflagellate from the coastal waters of Western Korea: morphology and molecular characterization

    Kang, N. S., Jeong, H. J., Moestrup, Øjvind, Lee, S. Y., Lim, A. S., Jang, T. Y., Lee, K. H., Lee, M. J., Jang, S. H., Potvin, E., Lee, S. K. & Noh, J. H., 2014, In: Journal of Eukaryotic Microbiology. 61, 2, p. 182-203 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    HER2-encoded mir-4728 forms a receptor-independent circuit with miR-21-5p through the non-canonical poly(A) polymerase PAPD5

    Newie, I., Søkilde, R., Persson, H., Jacomasso, T., Gorbatenko, A., Borg, Å., de Hoon, M., Pedersen, Stine Helene Falsig & Rovira, C., 2016, In: Scientific Reports. 6, 10 p., 35664.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Haslea silbo, A Novel Cosmopolitan Species of Blue Diatoms

    Gastineau, R., Hansen, G., Poulin, M., Lemieux, C., Turmel, M., Bardeau, J-F., Leignel, V., Hardivillier, Y., Morançais, M., Fleurence, J., Gaudin, P., Méléder, V., Cox, E. J., Davidovich, N. A., Davidovich, O. I., Witkowski, A., Kaczmarska, I., Ehrman, J. M., Onís, E. S., Quintana, A. M. & 11 others, Mucko, M., Mordret, S., Sarno, D., Jacquette, B., Falaise, C., Séveno, J., Lindquist, N. L., Kemp, P. S., Eker-Develi, E., Konucu, M. & Mouget, J., 2021, In: Biology. 10, 4, 27 p., 328.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Hodophilus (Clavariaceae, Agaricales) species with dark dots on the stipe: more than one species in Europe

    Adamčík, S., Jančovičová, S., Looney, B. P., Adamčíková, K., Griffith, G. W., Læssøe, Thomas, Moreau, P., Vizzini, A. & Matheny, P. B., Aug 2017, In: Mycological Progress. 16, 8, p. 811-821 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Hordeum vulgare differentiates its response to beneficial bacteria

    Duan, Y., Han, M., Grimm, M., Schierstaedt, J., Imani, J., Cardinale, M., Le Jean, M., Nesme, Joseph, Sørensen, Søren Johannes & Schikora, A., 2023, In: BMC Plant Biology. 23, 1, 16 p., 460.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    In Situ Macrofaunal Respiration Rates and their Importance for Benthic Carbon Mineralization on the Northwestern Black Sea Shelf

    Wenzhöfer, F., Riess, W. & Luth, U., 2002, In: Marine Biology Research. 56(2), p. 87-100

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    In Vitro Characterization of a Threonine-Ligated Molybdenyl-Sulfide Cluster as a Putative Cyanide Poisoning Antidote: Intracellular Distribution, Effects on Organic Osmolyte Homeostasis, and Induction of Cell Death

    Gretarsdottir, J. M., Lambert, Ian Henry, Stürup, Stefan & Suman, S. G., 2022, In: ACS Pharmacology and Translational Science. 5, 10, p. 907–918

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    In Vitro Community Synergy between Bacterial Soil Isolates Can Be Facilitated by pH Stabilization of the Environment

    Herschend, J., Koren, K., Røder, Henriette Lyng, Brejnrod, A., Kühl, Michael & Burmølle, Mette, 2018, In: Applied and Environmental Microbiology. 84, 21, e01450.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    In Vitro Evolution of Specific Phages Infecting the Fish Pathogen Flavobacterium psychrophilum

    Castillo, D., Højsting, A. R., Roosvall, A., Smyrlis, G., Jørgensen, J. & Middelboe, Mathias, 2022, In: PHAGE: Therapy, Applications, and Research. 3, 1, p. 28-37 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    In silico evolution of lysis-lysogeny strategies reproduces observed lysogeny propensities in temperate bacteriophages

    Sinha, V., Goyal, A., Svenningsen, Sine Lo, Semsey, S. & Krishna, S., 26 Jul 2017, In: Frontiers in Microbiology. 8, 11 p., 1386.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    In situ Autumn ozone fumigation of mature Norway Spruce - Effects on Net Photosynthesis

    Mikkelsen, T. N. & Ro-Poulsen, Helge, 2002, In: Phyton (Austria). 42, p. 97-104

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    In situ PCR for detection and identification of fungal species

    Bindslev, L., Oliver, R. P. & Johansen, B., 2002, In: Mycological Research. 106, p. 277-279

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    In situ and experimental evidence for effects of elevated pH on protistan and metazoan grazers

    Hansen, B. W., Andersen, C. M. B., Hansen, Per Juel, Nielsen, T. G., Vismann, Bent & Tiselius, P., 2019, In: Journal of Plankton Research. 41, 3, p. 257–271 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    In situ dynamics of O2, pH, light and photosynthesis in ikaite tufa columns (Ikka Fjord, Greenland) - a unique microbial habitat

    Trampe, Erik, Larsen, Jens Erik Nybo, Glaring, M. A., Stougaard, P. & Kühl, Michael, 2016, In: Frontiers in Microbiology. 7, 13 p., 722.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    In situ hydrogen dynamics in a hot spring microbial mat during a diel cycle

    Revsbech, N. P., Trampe, Erik, Lichtenberg, Mads, Ward, D. M. & Kühl, Michael, 2016, In: Applied and Environmental Microbiology. 82, 14, p. 4209-4217 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    In situ incubation of iron(II)-bearing minerals and Fe(0) reveals insights into metabolic flexibility of chemolithotrophic bacteria in a nitrate polluted karst aquifer

    Visser, A. N., Martin, Joseph Donald, Osenbrück, K., Rügner, H., Grathwohl, P. & Kappler, A., 2024, In: Science of the Total Environment. 926, 16 p., 172062.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    In situ ingestion of microfibres by meiofauna from sandy beaches

    Gusmão, F., Di Domenico, M., Amaral, A. C. Z., Martinez Garcia, A., Gonzalez, B. C., Worsaae, Katrine, Ivar do Sul, J. A. & Cunha Lana, P. D., 2016, In: Environmental Pollution. 216, p. 584-590 7 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  57. Published

    In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina

    Behrendt, L., Raina, J., Lutz, A., Kot, W., Albertsen, M., Nielsen, P. H., Sørensen, Søren Johannes, Larkum, A. W. D. & Kühl, Michael, 2018, In: I S M E Journal. 12, p. 556–567 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    In situ oxygen dynamics and carbon turnover in an intertidal sediment (Skallingen, Denmark)

    Walpersdorf, E. C., Kühl, Michael, Elberling, Bo, Andersen, Thorbjørn Joest, Hansen, Birger, Pejrup, M. & Glud, R. N., 2017, In: Marine Ecology - Progress Series. 566, p. 49-65 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    In situ oxygen dynamics in rhizomes of seagrass Posidonia sinuosa: impact of light, water column oxygen, current speed and wave velocity

    Olsen, Y. S., Fraser, M. W., Martin, B. C., Pomeroy, A., Lowe, R., Pedersen, Ole & Kendrick, G. A., 2018, In: Marine Ecology - Progress Series. 590, p. 67-77 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    In vitro characterization of a novel C,N-cyclometalated benzimidazole Ru(II) complex: stability, intracellular distribution and binding, effects on organic osmolyte homeostasis and induction of apoptosis

    Dam, C. S., Henarejos, S. A. P., Tsolakou, T., Segato, C. A., Gammelgaard, Bente, Yellol, G. S., Ruiz, J., Lambert, Ian Henry & Stürup, Stefan, 2015, In: Metallomics. 5, p. 885-895 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    In vitro community synergy between bacterial soil isolates can be facilitated by pH stabilisation of the environment.

    Herschend, J., Koren, K., Røder, Henriette Lyng, Brejnrod, A. D., Kühl, Michael & Burmølle, Mette, 2018, In: Applied and Environmental Microbiology. 84, 21, p. 1-15 e01450-18.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    In vitro digestion mimicking conditions in young and elderly reveals marked differences between profiles and potential bioactivity of peptides from meat and soy proteins

    Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Food Research International. 157, 11 p., 111215.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    In vitro evaluation of the enantiomeric R- and S-1,1'-binaphthyl-2,2'-diaminodichlorido-Pt(II) complexes in human Burkitt lymphoma cells: emphasis on cellular accumulation, cytotoxicity, DNA binding, and ability to induce apoptosis

    Sørensen, B. H., Werth, P., Lambert, Ian Henry & Bednarski, P. J., 2018, In: Metallomics. 10, 2, p. 323-336 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    In vivo and in vitro protein imaging in thermophilic archaea by exploiting a novel protein tag

    Visone, V., Han, W., Perugino, G., del Monaco, G., She, Q., Rossi, M., Valenti, A. & Ciaramella, M., 3 Oct 2017, In: PLoS ONE. 12, 10, 19 p., e0185791.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    In vivo genetic screening for therapeutic targets for type 2 diabetes: Modeling insulin resistance in Drosophila

    Jørgensen, A. F., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  66. Published

    In vivo imaging of coral tissue and skeleton with optical coherence tomography

    Wangpraseurt, D., Wentzel, C., Jacques, S. J., Wagner, M. & Kühl, Michael, 2017, In: Journal of the Royal Society. Interface. 14, 128, 12 p., 20161003.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    In vivo microscale measurements of light and photosynthesis during coral bleaching: evidence for the optical feedback loop?

    Wangpraseurt, D., Holm, J. B., Larkum, A. W. D., Pernice, M., Ralph, P. J., Sugget, D. J. & Kühl, Michael, 24 Jan 2017, In: Frontiers in Microbiology. 8, 12 p., 59.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    In vivo, genome-wide profiling of endogenously tagged chromatin-binding proteins with spatial and temporal resolution using NanoDam in Drosophila

    Tang, J. L. Y., Krautz, Robert, Llorà-Batlle, O., Hakes, A. E., Fox, P. M. & Brand, A. H., 2022, In: STAR Protocols. 3, 4, 30 p., 101788.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    In-vivo imaging of O2 dynamics on coral surfaces spray-painted with sensor nanoparticles

    Koren, K., Jakobsen, S. L. & Kühl, Michael, 2016, In: Sensors and Actuators B: Chemical. 237, p. 1095–1101 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Katodinium glaucum (Dinophyceae) revisited: proposal of new genus, family and order, based on ultrastructure and phylogeny

    Boutrup, P. V., Moestrup, Øjvind, Tillmann, U. & Daugbjerg, Niels, 2016, In: Phycologia. 55, 2, p. 147-164 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Lactobacillus rhamnosus GG Genomic and Phenotypic Stability in an Industrial Production Process

    Strickertsson, Marianne Stage, Wichmann, A., Jørgensen, M., Vera-Jimenéz, N. I., Wielje, M., Nielsen, Dennis Sandris, Sandelin, Albin Gustav, Chen, Y. & Baker, A., 2020, In: Applied and Environmental Microbiology. 86, 6, 15 p., e02780-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Legionella maioricensis sp. nov., a new species isolated from the hot water distribution systems of a hospital and a shopping center during routine sampling

    Crespi, S., Drašar, V., Salvà-Serra, F., Jaén-Luchoro, D., Piñeiro-Iglesias, B., Lindemann, P. C., Aliaga-Lozano, F., Fernandez Juarez, Victor, Coll-García, G., Moore, E. R. B. & Bennasar-Figueras, A., 2023, In: International Journal of Systematic and Evolutionary Microbiology. 73, 1, 12 p., 005686.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Litholepas klausreschi gen. et sp. nov., a new neolepadine barnacle (Cirripedia, Thoracica) on a sponge from the Upper Jurassic lithographic limestones of southern Germany

    Nagler, C., Haug, J. T., Glenner, Henrik & Buckeridge, J., 1 Jan 2017, In: Neues Jahrbuch fur Geologie und Palaontologie - Abhandlungen. 284, 1, p. 29-42 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Lobaria pulmonaria (L.) Hoffm. in the southwestern Baltic – Kattegat area

    Schiefelbein, U., Arnfred, T., Dolnik, C., Neumann, P., Ossowska, E., Poulsen, R., Søchting, Ulrik & Thell, A., 2021, In: Folia Cryptogamica Estonica. 58, p. 183-197

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Mammuthus sp. (Early and Middle Pleistocene Mammoths)

    Chrzanová Pecnerová, Patrícia, Díez-del-Molino, D., van der Valk, T., Dehasque, M., Götherström, A. & Dalén, L., 2021, In: Trends in Genetics. 37, 7, p. 682-683 2 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  76. Published

    Marchantiana pyramus, M. ramulicola and Austroplaca thisbe (Teloschistaceae, lichenized Ascomycota) - three new twig lichens from southern Patagonia

    Søchting, Ulrik, Sancho, L. G. & Arup, U., 2023, In: Lichenologist. 55, 5, p. 377-387 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Melobesia subplana Rosenvinge (Corallinales, Rhodophyta) is conspecific with Pneophyllum fragile Kützing

    Wegeberg, S., 2001, In: Nordic Journal of Botany. 21, p. 329-336

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Mesodinium rubrum: the symbiosis that wasn’t

    Johnson, M. D., Lasek-Nesselquist , E., Moeller, H. V., Altenburger, A., Lundholm, Nina, Kim, M., Drumm, Kirstine, Moestrup, Øjvind & Hansen, Per Juel, 14 Feb 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 7, p. E1040-E1042 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  79. Published

    Micromeria browiczii (Labiatae), an unusual new species from Zakinthos (Ionian islands, Greece)

    Tan, K. & Zielinski, J., 2001, In: Polish Botanical Journal. 46(1), p. 31-33

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Micromeria zarkosii (Lamiaceae), an unusual new species from Naxos (central Kiklades, Greece)

    Tan, K., Biel, B. & Zieliński, J., 2020, In: Nordic Journal of Botany. 38, 11, 4 p., e02975.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Modiolus cimbricus sp. nov. (Bivalvia: Mytilidae) endemic in the Kattegat-Skagerrak

    Ockelmann, K. W. & Cedhagen, T., 2019, In: European Journal of Taxonomy. 556, p. 1-13

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Mucispirillum schaedleri Antagonizes Salmonella Virulence to Protect Mice against Colitis

    Herp, S., Brugiroux, S., Garzetti, D., Ring, D., Jochum, L. M., Beutler, M., Eberl, C., Hussain, S., Walter, S., Gerlach, R. G., Ruscheweyh, H. J., Huson, D., Selling, M. E., Slack, E., Hanson, B., Loy, A., Baines, J. F., Rausch, P., Basic, M., Bleich, A. & 2 others, Berry, D. & Stecher, B., 2019, In: Cell Host & Microbe. 25, 5, p. 681-694, e1-e8

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Mycena species can be opportunist-generalist plant root invaders

    Harder, Christoffer Bugge, Hesling, E., Botnen, S. S., Lorberau, K. E., Dima, B., von Bonsdorff-Salminen, T., Niskanen, T., Jarvis, S. G., Ouimette, A., Hester, A., Hobbie, E. A., Taylor, A. F. S. & Kauserud, H., 2023, In: Environmental Microbiology. 25, 10, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Nocardia macrotermitis sp. nov. and Nocardia aurantia sp. nov., isolated from the gut of the fungus-growing termite Macrotermes natalensis

    Benndorf, R., Schwitalla, J. W., Martin, K., De Beer, Z. W., Vollmers, J., Kaster, A., Poulsen, Michael & Beemelmanns, C., 2020, In: International Journal of Systematic and Evolutionary Microbiology. 70, 10, p. 5226-5234 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Obscuroplaca gen. nov. – a replacement name for Phaeoplaca; Teloschistaceae (lichenized Ascomycota) from the Galapagos Islands

    Bungartz, F., Søchting, Ulrik & Arup, U., 2021, In: Plant and Fungal Systematics. 66, 2, p. 240-241 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  86. Published

    P. aeruginosa flow-cell biofilms are enhanced by repeated phage treatments but can be eradicated by phage-ciprofloxacin combination: —monitoring the phage–P. aeruginosa biofilms interactions

    Henriksen, K., Rørbo, N., Rybtke, Morten Levin, Martinet, M. G., Tolker-Nielsen, Tim, Høiby, Niels, Middelboe, Mathias & Ciofu, Oana, 2019, In: Pathogens and Disease. 77, 2, 11 p., ftz011.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    POPDC1S201F causes muscular dystrophy and arrhythmia by affecting protein trafficking

    Schindler, R. F. R., Scotton, C., Zhang, J., Passarelli, C., Ortiz-Bonnin, B., Simrick, S., Schwerte, T., Poon, K-L., Fang, M., Rinne, S., Froese, A., Nikolaev, V. O., Grunert, C., Mueller, T., Tasca, G., Sarathchandra, P., Drago, F., Dallapiccola, B., Rapezzi, C., Arbustini, E. & 14 others, Di Raimo, F. R., Neri, M., Selvatici, R., Gualandi, F., Fattori, F., Pietrangelo, A., Li, W., Jiang, H., Xu, X., Bertini, E., Becher, N., Wang, J., Brand, T. & Ferlini, A., 2016, In: Journal of Clinical Investigation. 126, 1, p. 239-253 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    PSX, Protein-Solvent Exchange: software for calculation of deuterium-exchange effects in small-angle neutron scattering measurements from protein coordinates

    Pedersen, Martin Cramer, Wang, Yong, Tidemand, Frederik Grønbæk, Martel, A., Lindorff-Larsen, Kresten & Arleth, Lise, 2019, In: Journal of Applied Crystallography. 52, 6, p. 1427-1436 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Papio spp. Colon microbiome and its link to obesity in pregnancy

    Li, Xuan Ji, Rensing, C., Taylor, W. L., Costelle, C., Brejnrod, A. D., Ferry, R. J. ,. J., Higgins, P. B., Folli, F., Kottapalli, K. R., Hubbard, G. B., Dick, E. J. ,. J., Yooseph, S., Nelson, K. E. & Schlabritz-Loutsevitch, N., Dec 2018, In: Journal of Medical Primatology. 47, 6, p. 393-401

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Parvilucifera infectans Norén et Moestrup gen. et sp. nov. (Perkinsozoa phylum nov.): A parasitic flagellate capable of killing toxic microaalgae

    Norén, F., Moestrup, Øjvind & Rehnstam-Holm, A., 1999, In: European Journal of Protistology. 35, p. 233-254

    Research output: Contribution to journal › Journal article › Research

  91. Published

    Polygonum melihae sp. nov. (Polygonaceae) from inner west Anatolia, Turkey

    Gemici, Y. & Tan, K., 2014, In: Nordic Journal of Botany. 32, 5, p. 540-542 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Porpidia navarina, a new endemic species from Isla Navarino (southern Tierra del Fuego, Chile)

    Ruprecht, U., Søchting, Ulrik & Türk, R., 2016, In: Herzogia. 29, 2, p. 596-609 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Prevotella-to-Bacteroides ratio predicts body weight and fat loss success on 24-week diets varying in macronutrient composition and dietary fiber: results from a post-hoc analysis

    Hjorth, Mads Fiil, Blædel, T., Bendtsen, L. Q., Lorenzen, J. K., Holm, J. B., Kiilerich, P., Roager, Henrik Munch, Kristiansen, Karsten, Larsen, L. H. & Astrup, A., 1 Jan 2019, In: International Journal of Obesity. 43, 1, p. 149-157

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Prymnesium parvum revisited: relationship between allelopathy, ichthyotoxicity, and chemical profiles in 5 strains

    Blossom, H. E., Rasmussen, S. A., Andersen, N. G., Larsen, T. O., Nielsen, K. F. & Hansen, Per Juel, 2014, In: Aquatic Toxicology. 157, p. 159-166 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Pseudomonas aeruginosa tolerance to tobramycin, hydrogen peroxide and polymorphonuclear leukocytes is quorum-sensing dependent

    Bjarnsholt, Thomas, Jensen, Peter Østrup, Burmølle, Mette, Hentzer, M., Haagensen, J. A. J., Hougen, H. P., Calum, H., Madsen, K. G., Moser, Claus Ernst, Molin, S., Høiby, Niels & Givskov, Michael, Feb 2005, In: Microbiology. 151, Pt 2, p. 373-83 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Pseudomonas aeruginosa aggregate formation in an alginate bead model system exhibits In Vivo-like characteristics

    Sønderholm, M., Kragh, K. N., Koren, K., Jakobsen, Tim Holm, Darch, S., Alhede, M., Jensen, Peter Østrup, Whiteley, M., Kühl, Michael & Bjarnsholt, Thomas, May 2017, In: Applied and Environmental Microbiology. 83, 9, 15 p., e00113-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Pycnoscelus surinamensis cockroach gut microbiota respond consistently to a fungal diet without mirroring those of fungus-farming termites

    Richards, C., Otani, S., Mikaelyan, A. & Poulsen, Michael, 3 Oct 2017, In: PLoS ONE. 12, 10, 19 p., e0185745.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Ramonia chrysophaea new to Denmark

    Larsen, R. S. & Søchting, Ulrik, 2003, In: Graphis Scripta. 14, p. 7-9

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Rhizopogon spore bank communities within and among California pine forests

    Kjøller, Rasmus & Bruns, T. D., 2003, In: Mycologia. 95, p. 603-613

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Rhynchostegium megapolitanum (Web. et Mohr) B.S.G.-A rare bryophyte in dune ecosystems of Zealand, Denmark

    Johnsen, I., 2014, In: American Journal of Plant Sciences. 5, 9, p. 1378-1383 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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