Department of Biology

 

 
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  1. 2020
  2. Published

    Multi-taxon inventory reveals highly consistent biodiversity responses to ecospace variation

    Brunbjerg, A. K., Bruun, Hans Henrik, Dalby, L., Classen, A. T., Fløjgaard, C., Frøslev, Tobias Guldberg, Hansen, O. L. P., Høye, T. T., Moeslund, J. E., Svenning, J. & Ejrnæs, R., 2020, In: Oikos. 129, 9, p. 1381-1392 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Mutation spectrum of the bestrophin-1 gene in a large Chinese cohort with bestrophinopathy

    Gao, F., Qi, Y., Hu, F., Wang, D., Xu, P., Guo, J., Li, J., Zhang, Y., Li, W., Chen, F., Xu, G., Liu, W., Chang, Q. & Wu, J., 2020, In: British Journal of Ophthalmology. 104, 6, p. 846-851 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Mutations in a Single Signaling Pathway Allow Cell Growth in Heavy Water

    Kampmeyer, Caroline, Johansen, Jens Vilstrup, Holmberg, Christian, Karlson, M., Andersen, Sarah Gersing, Nunes Bordallo, Heloisa, Kragelund, Birthe Brandt, Lerche, M. H., Jourdain, I., Winther, Jakob R. & Hartmann-Petersen, Rasmus, 2020, In: A C S Synthetic Biology. 9, 4, p. 733-748 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Mykologiske aktiviteter på Strødam 2019

    Læssøe, Thomas, 2020, Strødamreservatet & Strødamlaboratoriet - Årsberetning 2019. p. 7-10

    Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Communication

  6. Published

    Near-Random Distribution of Chromosome-Derived Circular DNA in the Condensed Genome of Pigeons and the Larger, More Repeat-Rich Human Genome

    Møller, H. D., Ramos Madrigal, Jazmin, Prada Luengo, Inigo, Gilbert, M Thomas P & Regenberg, Birgitte, 2020, In: Genome Biology and Evolution. 12, 2, p. 3762-3777 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    New insights into the limited thermotolerance of anhydrobiotic tardigrades

    Cardoso Neves, R. A., Stuart, R. M. & Møbjerg, Nadja, 2020, In: Communicative & Integrative Biology. 13, 1, p. 140-146

    Research output: Contribution to journal › Letter › Research › peer-review

  8. Published

    Next Generation Diabetes Scientists Shape Global Research Culture: A reflective proposal from postdoctoral researchers in diabetes research

    Gonzalez-Franquesa, A., Carrasquilla Lopez, G. D., Mamidi, A., Ghiasi, S. M., Juel, H. B., Falk, S., Isidor, M. S., Gillberg, L. M. E., Huang, L. O., Quist, J. S., Knudsen, J. R., Quaranta, R., Tozzi, M., Mikkelsen, R. B., Dall, M., Drag, M. H., Small, L. B., Altıntaş, A., Osborne, B., Modvig, I. M. & 11 others, Husted, Anna Sofie, Brown, E. L., Bak, Emilie Glad, Bastos Peluso, A. A., Finger, Fabian Michael, Grunddal, Kaare Villum, Rupar, K., Henningsen, J. B., Pedersen, M. H., Plucinska, Kaja & Attendees of the Danish Diabetes Academy Winter School 2019, A. O. T. D. D. A. W. S. 2., 2020, In: Acta Physiologica. 229, 2, 5 p., e13455.

    Research output: Contribution to journal › Comment/debate › Research

  9. Published

    Nitrogen Fixation in a Changing Arctic Ocean: An Overlooked Source of Nitrogen?

    Winberg von Friesen, Lisa & Riemann, Lasse, 2020, In: Frontiers in Microbiology. 11, 9 p., 596426.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Nitrogen fertilizers stimulate desorption and biodegradation of gasoline aromatics in the soil from high Arctic permafrost active layer: a laboratory study

    Sun, Y., Romantschuk, M., Bang-Andreasen, T., Rantalainen, A. L. & Sinkkonen, A., 2020, In: International Biodeterioration and Biodegradation. 150, 9 p., 104957.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Nitrogen fixation in marine waters: Importance of environmental gradients

    Hallstrøm, S., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 186 p.

    Research output: Book/Report › Ph.D. thesis › Research

  12. Published

    Nitrogen isotopes reveal high N retention in plants and soil of old Norse and Inuit deposits along a wet-dry arctic fjord transect in Greenland

    Andersen, E. A. S., Michelsen, Anders, Fenger-Nielsen, R., Hollesen, J., Ambus, Per Lennart & Elberling, Bo, 2020, In: Plant and Soil. 455, 1-2, p. 241-255 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    No Evidence for N7-Methylation of Guanosine (m7G) in Human let-7e

    Vinther, Jeppe, 2020, In: Molecular Cell. 79, 2, p. 199-200 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  14. Published

    Noninvasive prenatal paternity testing by maternal plasma DNA sequencing in twin pregnancies

    Xie, Y., Qu, N., Lin, S., Jiang, H., Zhang, Y., Zhang, X., Liang, H., Chen, F. & Ou, X., 2020, In: Electrophoresis. 41, 12, p. 1095-1102

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Novel HARS2 missense variants identified in individuals with sensorineural hearing impairment and Perrault syndrome

    Karstensen, H. G., Rendtorff, N. D., Hindbæk, L. S., Colombo, R., Stein, Amelie, Birkebæk, N. H., Hartmann-Petersen, Rasmus, Lindorff-Larsen, Kresten, Højland, A. T., Petersen, M. B. & Tranebjærg, Lisbeth, 2020, In: European Journal of Medical Genetics. 63, 3, 6 p., 103733.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Novel Cyclic Lipopeptide Antibiotics: Effects of Acyl Chain Length and Position

    Jensen, S. K., Thomsen, T. T., Oddo, A., Franzyk, Henrik, Løbner-Olesen, Anders & Hansen, Paul Robert, 2020, In: International Journal of Molecular Sciences . 21, 16, 18 p., 5829.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Novel variants associated with Stargardt disease in Chinese patients

    Hu, F., Gao, F., Li, J., Xu, P., Wang, D., Chen, F., Zhang, S. & Wu, J., 2020, In: Gene. 754, 10 p., 144890.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Nutritional Dimensions of Invasive Success

    Shik, Jonathan Z. & Dussutour, A., 2020, In: Trends in Ecology and Evolution. 35, 8, p. 691-703 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  19. Published

    Ny natur på opgivne lavbundsjorde

    Sand-Jensen, Kaj & Schou, J. C., 2020, In: URT. 44, 2, p. 16-20

    Research output: Contribution to journal › Journal article › Communication

  20. Published

    Nye søer - borgerinteresse, økologi og biodiversitet

    Sand-Jensen, Kaj, 2020, In: Vand & Jord. 27, 4, p. 118-121

    Research output: Contribution to journal › Editorial › Research

  21. Published

    Nye søer nu og i fremtiden

    Sand-Jensen, Kaj, Søndergaard, M. & Egemose, S., 2020, In: Vand & Jord. 27, 4, p. 122-126

    Research output: Contribution to journal › Journal article › Communication

  22. Published

    Nyt fra svampeatlas

    Heilmann-Clausen, Jacob, Frøslev, Tobias Guldberg, Jeppesen, T. S., Læssøe, Thomas, Lange, C., Lind, E. M. & Søchting, Ulrik, 2020, In: Svampe. 81, p. 35-42

    Research output: Contribution to journal › Journal article › Communication

  23. Published

    O-glycan initiation directs distinct biological pathways and controls epithelial differentiation

    Bagdonaite, Ieva , Pallesen, E. M. H., Ye, Z., Vakhrushev, Sergey, Marinova, I. N., Nielsen, Mathias Alexander Ingemann, Kramer, S. H., Pedersen, Stine Helene Falsig, Joshi, Hiren Jitendra, Bennett, Eric Paul, Dabelsteen, Sally & Wandall, Hans H., 2020, In: EMBO Reports. 21, 6, 17 p., e48885.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Occurrence and Functions of m6A and Other Covalent Modifications in Plant mRNA

    Arribas Hernandez, Laura & Brodersen, Peter, 2020, In: Plant Physiology. 182, 1, p. 79-96 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Oil gland and oil pores in billfishes: in search of a function

    Dhellemmes, F., Hansen, M. J., Bouet, S. D., Videler, J. J., Domenici, P., Steffensen, John Fleng, Hildebrandt, T., Fritsch, G., Bach, P., Sabarros, P. S., Krüger, A., Kurvers, R. H. J. M. & Krause, J., 2020, In: The Journal of Experimental Biology. 223, 7 p., jeb224956.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Omega-3 fatty acids and risk of cardiovascular disease in Inuit: First prospective cohort study

    Senftleber, N. K., Albrechtsen, Anders, Lauritzen, Lotte, Larsen, C. L., Bjerregaard, P., Diaz, L. J., Rønn, P. F. & Jørgensen, M. E., 2020, In: Atherosclerosis. 312, p. 28-34 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Ongoing revision of Echiniscoididae (Heterotardigrada: Echiniscoidea), with the description of a new interstitial species and genus with unique anal structures

    Møbjerg, Nadja, Jørgensen, Aslak & Kristensen, Reinhardt Møbjerg, 2020, In: Zoological Journal of the Linnean Society . 188, 3, p. 663-680 18 p., zlz122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Optimal Variance Control of the Score-Function Gradient Estimator for Importance Weighted Bounds

    Liévin, V., Dittadi, A., Christensen, Anders & Winther, Ole, 2020, In: Advances in Neural Information Processing Systems. 2020-December, 12 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  29. Published

    Organismal benefits of transcription speed control at gene boundaries

    Leng, Xueyuan, Ivanov, M., Kindgren, P., Malik, I., Thieffry, A., Brodersen, Peter, Sandelin, Albin Gustav, Kaplan, C. D. & Marquardt, Sebastian, 2020, In: EMBO Reports. 21, 4, 16 p., e49315.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Origin and impact of circular DNA on the eukaryotic genomes

    Prada Luengo, Inigo, 2020, Department of Biology, Faculty of Science, University of Copenhagen. 169 p.

    Research output: Book/Report › Ph.D. thesis › Research

  31. Published

    Origin of volatile organic compound emissions from subarctic tundra under global warming

    Ghirardo, A., Lindstein, F., Koch, K., Buegger, F., Schloter, M., Albert, A., Michelsen, Anders, Winkler, J. B., Schnitzler, J. & Rinnan, Riikka, 2020, In: Global Change Biology. 26, 3, p. 1908-1925

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Origins: It takes a well rooted trunk to bear a tree - reductionist models of divergent evolution and further aspects of reality

    Egel, Richard, 2020, Untangling Molecular Biodiversity: Explaining Unity and Diversity Principles of Organization with Molecular Structure and Evolutionary Genomics. Caetano-Anollés, G. (ed.). World Scientific, p. 223-282 60 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  33. Published

    PGC-1α-mediated regulation of mitochondrial function and physiological implications

    Halling, Jens Frey & Pilegaard, Henriette, 2020, In: Applied Physiology, Nutrition and Metabolism. 45, 9, p. 927-936 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  34. Published

    PIRD: Pan Immune Repertoire Database

    Zhang, W., Wang, L., Liu, K., Wei, X., Yang, K., Du, W., Wang, S., Guo, N., Ma, C., Luo, L., Wu, J., Lin, L., Yang, F., Gao, F., Wang, X., Li, T., Zhang, R., Saksena, N. K., Yang, H., Wang, J. & 4 others, Fang, L., Hou, Y., Xu, X. & Liu, X., 2020, In: Bioinformatics. 36, 3, p. 897-903 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    PTR-TOF-MS eddy covariance measurements of isoprene and monoterpene fluxes from an eastern Amazonian rainforest

    Sarkar, C., Guenther, A. B., Park, J. H., Seco, Roger, Alves, E., Batalha, S., Santana, R., Kim, S., Smith, J., Tóta, J. & Vega, O., 2020, In: Atmospheric Chemistry and Physics. 20, 12, p. 7179-7191 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Pannexin-1 mediated ATP release in adipocytes is sensitive to glucose and insulin and modulates lipolysis and macrophage migration

    Tozzi, M., Hansen, Jacob B. & Novak, Ivana, 2020, In: Acta Physiologica. 228, 2, 18 p., e13360.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    PasT of Escherichia coli sustains antibiotic tolerance and aerobic respiration as a bacterial homolog of mitochondrial Coq10

    Fino, C., Vestergaard, M., Ingmer, Hanne, Pierrel, F., Gerdes, K. & Harms, A., 2020, In: MicrobiologyOpen. 9, 8, 36 p., e1064.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Patterns and Processes of the Microbiome Assembly at a Small-Scale of the Plant Root Microenvironments: Study Case on the Wheat and Faba Bean Root Systems

    Attia, S. M. H., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 132 p.

    Research output: Book/Report › Ph.D. thesis › Research

  39. Published

    Peptides containing the PCNA interacting motif APIM bind to the β-clamp and inhibit bacterial growth and mutagenesis

    Nedal, A., Ræder, S. B., Dalhus, B., Helgesen, E., Forstrøm, R. J., Lindland, K., Sumabe, B. K., Martinsen, J. H., Kragelund, Birthe Brandt, Skarstad, K., Bjørås, M. & Otterlei, M., 2020, In: Nucleic Acids Research. 48, 10, p. 5540-5554 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Persistence and progression of staphylococcal infection in the presence of public goods

    Trivedi, Urvish, Fell, C., Madsen, Jonas Stenløkke, Everett, J., Burmølle, Mette, Rumbaugh, K. P. & Sørensen, Søren Johannes, 2020, In: npj Biofilms and Microbiomes. 6, 5 p., 55.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    PhenoChip: A single-cell phenomic platform for high-throughput photophysiological analyses of microalgae

    Behrendt, L., Mehdi Salek, M., Trampe, Erik, Fernandez, V. I., Lee, K. S., Kühl, Michael & Stocker, R., 2020, In: Science Advances. 6, 36, 14 p., eabb2754.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Phylogenetic origins and family classification of typhuloid fungi, with emphasis on Ceratellopsis, Macrotyphula and Typhula (Basidiomycota)

    Olariaga, I., Huhtinen, S., Læssøe, Thomas, Petersen, J. H. & Hansen, K., 2020, In: Studies in Mycology. 96, p. 155-184 30 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Phylogenetic position, complete larval development and larval sexual dimorphism in a rhizocephalan barnacle, Lernaeodiscus rybakovi sp. nov. (Cirripedia: Rhizocephala: Peltogastridae), parasitizing the crab Pachycheles stevensii Stimpson, 1858 (Decapoda: Anomura: Porcellanidae)

    Korn, O. M., Golubinskaya, D. D., Rees, D. J., Glenner, Henrik & Høeg, Jens Thorvald, 2020, In: Zoologischer Anzeiger. 287, p. 178-197 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Plant-microbiota interactions in a nutrient Context & an assay to deduct mechanistic relationships between plants and microbiota

    Munkager, V., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 130 p.

    Research output: Book/Report › Ph.D. thesis › Research

  45. Published

    Plasmids persist in a microbial community by providing fitness benefit to multiple phylotypes

    Li, L., Dechesne, A., Madsen, Jonas Stenløkke, Nesme, Joseph, Sørensen, Søren Johannes & Smets, B. F., 2020, In: I S M E Journal. 14, 5, p. 1170-1181 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Plasmids, CRISPR-Cas and Anti-CRIPSRs: Uncovering the secret lives of mobile genetic elements

    Pinilla Redondo, Rafael, 2020, Department of Biology, Faculty of Science, University of Copenhagen. 217 p.

    Research output: Book/Report › Ph.D. thesis › Research

  47. Published

    Polyelectrolyte interactions enable rapid association and dissociation in high-affinity disordered protein complexes

    Sottini, A., Borgia, A., Borgia, M. B., Bugge, K., Nettels, D., Chowdhury, A., Heidarsson, P. O., Zosel, F., Best, R. B., Kragelund, Birthe Brandt & Schuler, B., 2020, In: Nature Communications. 11, 14 p., 5736.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Population genetics reveals the selection of honey bee aggression behaviour

    Pan, H., 2020, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  49. Published

    Population genomics of the Viking world: [incl. correction]

    Margaryan, A., Lawson, D. J., Sikora, M., Racimo, F., Rasmussen, S., Moltke, I., Cassidy, L. M., Jørsboe, E., Ingason, A., Pedersen, M. W., Korneliussen, T., Wilhelmson, H., Buś, M. M., de Barros Damgaard, P., Martiniano, R., Renaud, G., Bhérer, C., Moreno-Mayar, J. V., Fotakis, A. K., Allen, M. & 30 others, Allmäe, R., Molak, M., Cappellini, Enrico, Scorrano, Gabriele, McColl, Hugh, Buzhilova, A., Fox, A., Albrechtsen, Anders, Schütz, B., Skar, B., Arcini, C., Lundstrøm, I., Cheng, J., Stenderup, Jesper Tandberg, Iversen, K. H., Arge, S. V., Ellingvåg, S., Orlando, L., Pentz, P., Jessen, M. D., Pedersen, A., Jørkov, M L S, Lynnerup, Niels, Gilbert, M Thomas P, Allentoft, Morten Erik, Sindbæk, S. M., Kristiansen, K., Nielsen, Rasmus, Werge, Thomas & Willerslev, Eske, 2020, In: Nature. 585, 7825, p. 390-396 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Pre-extinction Demographic Stability and Genomic Signatures of Adaptation in the Woolly Rhinoceros

    Lord, E., Dussex, N., Kierczak, M., Díez-del-Molino, D., Ryder, O. A., Stanton, D. W. G., Gilbert, M. T. P., Sánchez-Barreiro, F., Zhang, G., Sinding, M. H. S., Lorenzen, E. D., Willerslev, E., Protopopov, A., Shidlovskiy, F., Fedorov, S., Bocherens, H., Nathan, S. K. S. S., Goossens, B., van der Plicht, J., Chan, Y. L. & 10 others, Prost, S., Potapova, O., Kirillova, I., Lister, A. M., Heintzman, P. D., Kapp, J. D., Shapiro, B., Vartanyan, S., Götherström, A. & Dalén, L., 2020, In: Current Biology. 30, 19, p. 3871-3879, e1-e7 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Predictability of Leaf Morphological Traits for Paleoecological Reconstruction: The Case of Leaf Cuticle and Leaf Dry Mass per Area

    Veromann-Jürgenson, L., Brodribb, T. J., Laanisto, L., Bruun-Lund, S., Niinemets, Ü., Nuño, S. L., Rinnan, Riikka, Puglielli, G. & Tosens, T., 2020, In: International Journal of Plant Sciences. 181, 1, p. 129-141

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Predicting the Shapes of Protein Complexes through Collision Cross Section Measurements and Database Searches

    Landreh, M., Sahin, Cagla, Gault, J., Sadeghi, S., Drum, C. L., Uzdavinys, P., Drew, D., Allison, T. M., Degiacomi, M. T. & Marklund, E. G., 2020, In: Analytical Chemistry. 92, 18, p. 12297-12303 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Prenatal dietary supplements influence the infant airway microbiota in a randomized factorial clinical trial

    Hjelmsø, M. H., Shah, S. A., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Vestergaard, G., Mortensen, M. S., Brejnrod, A., Brix, S., Chawes, Bo Lund Krogsgaard, Bønnelykke, Klaus, Sørensen, Søren Johannes, Stokholm, Jakob & Bisgaard, H., 2020, In: Nature Communications. 11, 10 p., 426.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Pretreatment Prevotella-to-Bacteroides ratio and markers of glucose metabolism as prognostic markers for dietary weight loss maintenance

    Hjorth, Mads Fiil, Christensen, Lars, Kjølbæk, Louise, Larsen, L. H., Roager, Henrik Munch, Kiilerich, P., Kristiansen, Karsten & Astrup, A., 2020, In: European Journal of Clinical Nutrition. 74, 2, p. 338-347 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Prevalence, infection intensity and genotyping of Giardia duodenalis in ring-tailed lemurs Lemur catta from European zoos and wild populations

    Fomsgaard, A. S., Bornbusch, S. L., Bueno, G. L., Noromalala, E., Poulsen, Michael, Rasmussen, M., Rosenstierne, M. W., Stensvold, C. R., Wright, P. & Hvilsom, C., 2020, In: Journal of Zoo and Aquarium research. 8, 4, p. 253-258 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Proactive common waxbills make fewer mistakes in a cognitive assay, the detour-reaching task

    Gomes, A. C. R., Guerra, S., Silva, P. A., Marques, C. I., Trigo, S., Boogert, N. J. & Cardoso, G. C., 2020, In: Behavioral Ecology and Sociobiology. 74, 3, 15 p., 31.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Production of Intrinsically Disordered Proteins for Biophysical Studies: Tips and Tricks

    Pedersen, Christian Parsbæk, Seiffert, P., Brakti, Inna & Bugge, K., 2020, Intrinsically Disordered Proteins: Methods and Protocols. Kragelund, B. B. & Skriver, K. (eds.). Humana Press, p. 195-209 15 p. (Methods in Molecular Biology, Vol. 2141).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  58. Published

    Progressive Cactus is a multiple-genome aligner for the thousand-genome era

    Armstrong, J., Hickey, G., Diekhans, M., Fiddes, I. T., Novak, A. M., Deran, A., Fang, Q., Xie, D., Feng, S., Stiller, J., Genereux, D., Johnson, J., Marinescu, V. D., Alföldi, J., Harris, R. S., Lindblad-Toh, K., Haussler, D., Karlsson, E., Jarvis, E. D., Zhang, G. & 1 others, Paten, B., 2020, In: Nature. 587, 7833, p. 246-251

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Prokaryotic Community Composition and Extracellular Polymeric Substances Affect Soil Microaggregation in Carbonate Containing Semiarid Grasslands

    Zethof, J. H. T., Bettermann, A., Vogel, C., Babin, D., Cammeraat, E. L. H., Solé-Benet, A., Lázaro, R., Luna, L., Nesme, Joseph, Woche, S. K., Sørensen, Søren Johannes, Smalla, K. & Kalbitz, K., 2020, In: Frontiers in Environmental Science. 8, 19 p., 51.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Prophage-Related Gene VpaChn25_0724 Contributes to Cell Membrane Integrity and Growth of Vibrio parahaemolyticus CHN25

    Yang, L., Wang, Y., Yu, P., Ren, S., Zhu, Z., Jin, Y., Yan, J., Peng, Xu & Chen, L., 2020, In: Frontiers in Cellular and Infection Microbiology. 10, 18 p., 595709.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Protein Dynamics Enables Phosphorylation of Buried Residues in Cdk2/Cyclin-A-Bound p27

    Henriques, J. & Lindorff-Larsen, Kresten, 2020, In: Biophysical Journal. 119, 10, p. 2010-2018 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Protein destabilization and degradation as a mechanism for hereditary disease

    Nielsen, S. V., Schenstrøm, S. M., Christensen, Caspar Elo, Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2020, Protein Homeostasis Diseases: Mechanisms and Novel Therapies. Pey, A. L. (ed.). Elsevier, p. 111-125

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  63. Published

    Protocol for Purification of Human ZGRF1 and Its Regulatory Function on RAD51-Mediated D-Loop Formation

    Lisby, Michael & Xue, X., 2020, In: STAR Protocols. 1, 2

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Proton Pump Inhibitors Reduce Pancreatic Adenocarcinoma Progression by Selectively Targeting H+, K+-ATPases in Pancreatic Cancer and Stellate Cells

    Tozzi, M., Sørensen, Christiane Elisabeth, Magni, Lara, Christensen, Nynne, Bouazzi, R., Buch, C. M., Stefanini, M., Duranti, C., Arcangeli, A. & Novak, Ivana, 2020, In: Cancers. 12, 3, 22 p., 640.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Purification and Characterization of the Pink-Floyd Drillipeptide, a Bioactive Venom Peptide fromClavus davidgilmouri (Gastropoda: Conoidea: Drilliidae) 

    Chua, V. M., Gajewiak, J., Watkins, M., Espino, S. S., Ramiro, Iris Bea L. , Omaga, C. A., Imperial, J. S., Carpio, L. P. D., Fedosov, A., Safavi-Hemami, H., Salvador-Reyes, L. A., Olivera, B. M. & Concepcion, G. P., 2020, In: Toxins. 12, 8, 16 p., 508.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Purification and initial characterization of Plasmodium falciparum K+ channels, PfKch1 and PfKch2 produced in Saccharomyces cerevisiae

    Molbaek, K., Tejada, M., Ricke, C. H., Scharff-Poulsen, P., Ellekvist, P., Helix-Nielsen, C., Kumar, N., Klærke, Dan Arne & Pedersen, Per Amstrup, 2020, In: Microbial Cell Factories. 19, 1, 183.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Purinergic Signaling in Pancreas - From Physiology to Therapeutic Strategies in Pancreatic Cancer

    Novak, Ivana, Yu, Haoran, Magni, Lara & Deshar, Ganga, 2020, In: International Journal of Molecular Sciences (Online). 21, 22, 21 p., 8781.

    Research output: Contribution to journal › Review › Research › peer-review

  68. Published

    Pyrazine ring-based Na+/H+ exchanger (NHE) inhibitors potently inhibit cancer cell growth in 3D culture, independent of NHE1

    Rolver, M. G., Elingaard-Larsen, L. O., Andersen, Anne Poder, Counillon, L. & Pedersen, Stine Helene Falsig, 2020, In: Scientific Reports. 10, 17 p., 5800.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Pyruvate kinase M2 represses thermogenic gene expression in brown adipocytes

    Isidor, Marie Sophie, Winther, Sally, Markussen, L. K., Basse, A. L., Quistorff, B., Nedergaard, J., Emanuelli, Brice & Hansen, Jacob B., 2020, In: FEBS Letters. 594, 7, p. 1218-1225

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Quality of substrate and forest structure determine macrofungal richness along a gradient of management intensity in beech forests

    Atrena, A., Banelytė, G. G., Læssøe, Thomas, Riis-Hansen, R., Bruun, Hans Henrik, Rahbek, Carsten & Heilmann-Clausen, Jacob, 2020, In: Forest Ecology and Management. 478, 12 p., 118512.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    RRP7A links primary microcephaly to dysfunction of ribosome biogenesis, resorption of primary cilia, and neurogenesis

    Farooq, M., Lindbæk, L., Krogh, N., Doganli, C., Keller, C., Mönnich, M., Gonçalves, A. B., Sakthivel, S., Mang, Y., Fatima, A., Andersen, V. S., Hussain, M. S., Eiberg, H., Hansen, L., Kjaer, K. W., Gopalakrishnan, J., Pedersen, L. B., Møllgård, K., Nielsen, H., Baig, S. M. & 3 others, Tommerup, Niels, Christensen, Søren Tvorup & Larsen, Lars Allan, 2020, In: Nature Communications. 11, 16 p., 5816.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Rapid loss of endogenous DNA in pig bone buried in five different environments

    Eriksen, A. M. H., Matthiesen, H., Kontopoulos, I., Gregory, D., Snoeck, C., KU, thw266, Collins, Matthew James & Gilbert, M Thomas P, 2020, In: Archaeometry. 62, 4, p. 827-846 20 p.

    Research output: Contribution to journal › Review › Research › peer-review

  73. Published

    Recent insights on indirect mechanisms in developmental toxicity of nanomaterials

    Dugershaw, B. B., Aengenheister, L., Hansen, Signe Schmidt Kjølner, Hougaard, Karin Sørig & Buerki-Thurnherr, T., 2020, In: Particle and Fibre Toxicology. 17, 22 p., 31.

    Research output: Contribution to journal › Review › Research › peer-review

  74. Published

    Recurrent requirement for the m6A-ECT2/ECT3/ECT4 axis in the control of cell proliferation during plant organogenesis

    Arribas Hernandez, Laura, Simonini, S., Hansen, M. H., Botterweg Paredes, E., Bressendorff, Simon, Dong, Y., Østergaard, L. & Brodersen, Peter, 2020, In: Development. 147, 14, 19 p., dev189134.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Reduced somatostatin signalling leads to hypersecretion of glucagon in mice fed a high-fat diet

    Kellard, J. A., Rorsman, N. J. G., Hill, T. G., Armour, Sarah Louise, van de Bunt, M., Rorsman, P., Knudsen, Jakob Grunnet & Briant, L. J. B., 2020, In: Molecular Metabolism. 40, 13 p., 101021.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Regulation of Body Size and Growth Control

    Texada, Michael James, Koyama, Takashi & Rewitz, Kim, 2020, In: Genetics. 216, 2, p. 269-313 45 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Replication Protein A (RPA) Mediates Radio-Resistance of Glioblastoma Cancer Stem-Like Cells

    Pedersen, H., Obara, E. A. A., Elbæk, K. J., Vitting-Serup, K. & Hamerlik, P., 2020, In: International Journal of Molecular Sciences. 21, 5, 13 p., 1588.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Replicative aging is associated with loss of genetic heterogeneity from extrachromosomal circular DNA in Saccharomyces cerevisiae

    Prada Luengo, Inigo, Møller, H. D., Henriksen, Rasmus Henrik Amund, Gao, Q., Larsen, C. E., Alizadeh, S., Maretty, L., Houseley, J. & Regenberg, Birgitte, 2020, In: Nucleic Acids Research. 48, 14, p. 7883-7898 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Reply to: Transformation of naked mole-rat cells

    Zhao, J., Tian, X., Zhu, Y., Zhang, Z., Rydkina, E., Yuan, Y., Zhang, H., Roy, B., Cornwell, A., Nevo, E., Shang, X., Huang, R., Kristiansen, Karsten, Seluanov, A., Fang, X. & Gorbunova, V., 2020, In: Nature. 583, 7814, p. E8-E13

    Research output: Contribution to journal › Letter › Research › peer-review

  80. Published

    Research presented at the 14th International Symposium on Tardigrada: progress in studies on water bears

    Møbjerg, Nadja, Michalczyk, Ł., McInnes, S. J. & Christenhusz, M. J. M., 2020, In: Zoological Journal of the Linnean Society . 188, 3, p. 655-662

    Research output: Contribution to journal › Editorial › Research › peer-review

  81. Published

    Response of the Human Milk Microbiota to a Maternal Prebiotic Intervention Is Individual and Influenced by Maternal Age

    Padilha, M., Brejnrod, A., Danneskiold-Samsøe, Niels Banhos, Hoffmann, C., Iaucci, J. D. M., Cabral, V. P., Xavier-Santos, D., Taddei, C. R., Kristiansen, Karsten & Saad, S. M. I., 2020, In: Nutrients. 12, 4, 16 p., 1081.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Responses of surface SOC to long-term experimental warming vary between different heath types in the high Arctic tundra

    Jung, J. Y., Michelsen, Anders, Kim, M., Nam, S., Schmidt, N. M., Jeong, S., Choe, Y., Lee, B. Y., Yoon, H. I. & Lee, Y. K., 2020, In: European Journal of Soil Science. 71, 4, p. 752-767

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Review of GPS collar deployments and performance on nonhuman primates

    Dore, K. M., Hansen, M. F., Klegarth, A. R., Fichtel, C., Koch, F., Springer, A., Kappeler, P., Parga, J. A., Humle, T., Colin, C., Raballand, E., Huang, Z. P., Qi, X. G., Di Fiore, A., Link, A., Stevenson, P. R., Stark, D. J., Tan, N., Gallagher, C. A., Anderson, C. J. & 6 others, Campbell, C. J., Kenyon, M., Pebsworth, P., Sprague, D., Jones-Engel, L. & Fuentes, A., 2020, In: Primates. 61, 3, p. 373-387 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Rhizosphere microbial communities associated to rose replant disease: links to plant growth and root metabolites

    Yim, B., Baumann, A., Grunewaldt-Stöcker, G., Liu, B., Beerhues, L., Zühlke, S., Sapp, M., Nesme, Joseph, Sørensen, Søren Johannes, Smalla, K. & Winkelmann, T., 2020, In: Horticulture Research. 7, 16 p., 144.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Ribosome hibernation and its role in the maintenance of the translation machinery: How hibernation factors of E. coli protect ribosomes in adverse conditions

    Prossliner, T., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 176 p.

    Research output: Book/Report › Ph.D. thesis › Research

  86. Published

    Root O2 consumption, CO2 production and tissue concentration profiles in chickpea, as influenced by environmental hypoxia

    Colmer, T. D., Winkel, A., Kotula, L., Armstrong, W., Revsbech, N. P. & Pedersen, Ole, 2020, In: New Phytologist. 226, 2, p. 373-384

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Rose replant disease: detailed analyses of plant reactions, root endophytes and rhizosphere microbial communities

    Baumann, A., Yim, B., Grunewaldt-Stöcker, G., Liu, B., Beerhues, L., Sapp, M., Nesme, Joseph, Sørensen, Søren Johannes, Smalla, K. & Winkelmann, T., 2020, In: Acta Horticulturae. 1283, p. 97-104 8 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  88. Published

    SARS-CoV2-mediated suppression of NRF2-signaling reveals potent antiviral and anti-inflammatory activity of 4-octyl-itaconate and dimethyl fumarate

    Olagnier, D. P. C., Farahani, E., Jensen, J. T., Blay Cadanet, J., Herengt, A. A. P. V., Idorn, M., Schneider Hait, A. I., Hernaez, B., Knudsen, A., Iversen, M. B., Schilling, M., Jørgensen, S. E., Thomsen, M. M., Reinert, L. S., Lappe, M., Hoang, H. D., Gilchrist, V. H., Hansen, A. L., Ottosen, R., Nielsen, C. G. & 18 others, Møller, C., van der Horst, D., Peri, S., Balachandran, S., Huang, J., Jakobsen, M., Svenningsen, E. B., Poulsen, T. B., Bartsch, L., Thielke, A. L., Luo, Y., Alain, T., Rehwinkel, J., Alcamí, A., Hiscott, J., Mogensen, T. H., Paludan, S. R. & Holm, C. K., 2020, In: Nature Communications. 11, 12 p., 4938.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    SOAPTyping: an open-source and cross-platform tool for sequence-based typing for HLA class I and II alleles

    Zhang, Yong, Chen, Y., Xu, H., Fang, J., Zhao, Z., Hu, W., Yang, X., Ye, J., Cheng, Y., Wang, J., Sun, W., Wang, J., Yang, H., Yan, J. & Fang, L., 2020, In: BMC Bioinformatics. 21, 9 p., 295.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    SPT6-driven error-free DNA repair safeguards genomic stability of glioblastoma cancer stem-like cells

    Obara, E. A. A., Aguilar-Morante, D., Rasmussen, R. D., Frias, A., Vitting-Serup, K., Lim, Y. C., Elbæk, K. J., Pedersen, H., Vardouli, L., Jensen, K. E., Skjoth-Rasmussen, J., Brennum, J., Tuckova, L., Strauss, R., Dinant, C., Bartek, J. & Hamerlik, P., 2020, In: Nature Communications. 11, 14 p., 4709.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    STEEP mediates STING ER exit and activation of signaling

    Zhang, B., Nandakumar, R., Reinert, L. S., Huang, J., Laustsen, A., Gao, Z., Sun, C., Jensen, S. B., Troldborg, A., Assil, S., Berthelsen, M. F., Scavenius, C., Zhang, Y., Windross, S. J., Olagnier, D., Prabakaran, T., Chiranjeevi, B., Narita, R., Cai, Y., Zhang, C. & 11 others, Stenmark, H., Doucet, C. M., Noda, T., Guo, Z., Goldbach-Mansky, R., Hartmann, R., Chen, Z. J., Enghild, J. J., Bak, R. O., Thomsen, M. K. & Paludan, S. R., 2020, In: Nature Immunology. 21, 8, p. 868-+ 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera

    Oeyen, J. P., Baa-Puyoulet, P., Benoit, J. B., Beukeboom, L. W., Bornberg-Bauer, E., Buttstedt, A., Calevro, F., Cash, E. I., Chao, H., Charles, H., Chen, M-J. M., Childers, C., Cridge, A. G., Dearden, P., Dinh, H., Doddapaneni, H. V., Dolan, A., Donath, A., Dowling, D., Dugan, S. & 65 others, Duncan, E., Elpidina, E. N., Friedrich, M., Geuverink, E., Gibson, J. D., Grath, S., Grimmelikhuijzen, Cornelis (Cok), Große-Wilde, E., Gudobba, C., Han, Y., Hansson, B. S., Hauser, Frank, Hughes, D. S. T., Ioannidis, P., Jacquin-Joly, E., Jennings, E. C., Jones, J. W., Klasberg, S., Lee, S. L., Lesný, P., Lovegrove, M., Martin, S., Martynov, A. G., Mayer, C., Montagné, N., Moris, V. C., Munoz-Torres, M., Murali, S. C., Muzny, D. M., Oppert, B., Parisot, N., Pauli, T., Peters, R. S., Petersen, M., Pick, C., Persyn, E., Podsiadlowski, L., Poelchau, M. F., Provataris, P., Qu, J., Reijnders, M. J. M. F., Marcus von Reumont, B., Rosendale, A. J., Simao, F. A., Skelly, J., Sotiropoulos, A. G., Stahl, A. L., Sumitani, M., Szuter, E. M., Tidswell, O., Tsitlakidis, E., Vedder, L., Waterhouse, R. M., Werren, J. H., Wilbrandt, J., Worley, K. C., Yamamoto, D. S., van de Zande, L., Zdobnov, E. M., Ziesmann, T., Gibbs, R. A., Richards, S., Hatakeyama, M., Misof, B. & Niehuis, O., 2020, In: Genome Biology and Evolution. 12, 7, p. 1099-1118 evaa106.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Scramble-in: A fast and efficient method to diversify and improve the yields of heterologous pathways in synthetic yeast

    Swidah, R., Auxillos, Jamie Yam, Liu, W., Jones, S., Chan, T. F., Dai, J. & Cai, Y., 2020, Methods in Molecular Biology. Humana Press, p. 305-327 23 p. (Methods in Molecular Biology, Vol. 2205).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  94. Published

    Scratching the surface: native mass spectrometry of peripheral membrane protein complexes

    Sahin, Cagla, Reid, D. J., Marty, M. T. & Landreh, M., 2020, In: Biochemical Society Transactions. 48, 2, p. 547-558

    Research output: Contribution to journal › Review › Research › peer-review

  95. Published

    Screening for improved affinity of luminescence-complementing peptides in the NanoBiT luciferase system

    Bjerre, B., 2020, Department of Biology, Faculty of Science, University of Copenhagen. 111 p.

    Research output: Book/Report › Ph.D. thesis › Research

  96. Published

    Screening stably low cadmium and moderately high micronutrients wheat cultivars under three different agricultural environments of China

    Liu, N., Huang, X., Sun, L., Li, S., Chen, Y., Cao, X., Wang, W., Dai, J. & Rinnan, Riikka, 2020, In: Chemosphere. 241, 10 p., 125065.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Seasonal Shifts in Diazotrophs Players: Patterns Observed Over a Two-Year Time Series in the New Caledonian Lagoon (Western Tropical South Pacific Ocean)

    Saulia, E., Benavides, M., Henke, B., Turk-Kubo, K., Cooperguard, H., Grosso, O., Desnues, A., Rodier, M., Dupouy, C., Riemann, Lasse & Bonnet, S., 2020, In: Frontiers in Marine Science. 7, 581755.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Secreted breast tumor interstitial fluid microRNAs and their target genes are associated with triple-negative breast cancer, tumor grade, and immune infiltration

    Terkelsen, T., Russo, F., Gromov, P., Haakensen, V. D., Brunak, Søren, Gromova, I., Krogh, Anders & Papaleo, E., 2020, In: Breast Cancer Research. 22, 1, 36 p., 73.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Selection and propagation of IncP conjugative plasmids following long-term anthropogenic metal pollution in river sediments

    Cyriaque, V., Jacquiod, S. J. A., Riber, Leise, Abu Al-Soud, W., Gillan, D. C., Sørensen, Søren Johannes & Wattiez, R., 2020, In: Journal of Hazardous Materials. 382, 10 p., 121173.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Selection for outbreeding in Varroa parasitising resistant honey bee (Apis mellifera) colonies

    Conlon, B. H., Kastally, C., Kardell, M., Kefuss, J., Moritz, R. F. A. & Routtu, J., 2020, In: Ecology and Evolution. 10, 14, p. 7806-7811 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Separating direct and indirect effects of rising temperatures on biogenic volatile emissions in the Arctic

    Rinnan, Riikka, Iversen, Lars Lønsmann, Tang, Jing, Vedel-Petersen, I., Schollert, M. & Schurgers, Guy, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 51, p. 32476-32483 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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