Sinking Trichodesmium fixes nitrogen in the dark ocean

Research output: Contribution to journalJournal articleResearchpeer-review

Standard

Sinking Trichodesmium fixes nitrogen in the dark ocean. / Benavides, Mar; Bonnet, Sophie; Le Moigne, Frédéric A. C.; Armin, Gabrielle; Inomura, Keisuke; Hallstrøm, Søren; Riemann, Lasse; Berman-Frank, Ilana; Poletti, Emilie; Garel, Marc; Grosso, Olivier; Leblanc, Karine; Guigue, Catherine; Tedetti, Marc; Dupouy, Cécile.

In: The ISME Journal, Vol. 16, No. 10, 2022, p. 2398-2405.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Benavides, M, Bonnet, S, Le Moigne, FAC, Armin, G, Inomura, K, Hallstrøm, S, Riemann, L, Berman-Frank, I, Poletti, E, Garel, M, Grosso, O, Leblanc, K, Guigue, C, Tedetti, M & Dupouy, C 2022, 'Sinking Trichodesmium fixes nitrogen in the dark ocean', The ISME Journal, vol. 16, no. 10, pp. 2398-2405. https://doi.org/10.1038/s41396-022-01289-6

APA

Benavides, M., Bonnet, S., Le Moigne, F. A. C., Armin, G., Inomura, K., Hallstrøm, S., Riemann, L., Berman-Frank, I., Poletti, E., Garel, M., Grosso, O., Leblanc, K., Guigue, C., Tedetti, M., & Dupouy, C. (2022). Sinking Trichodesmium fixes nitrogen in the dark ocean. The ISME Journal, 16(10), 2398-2405. https://doi.org/10.1038/s41396-022-01289-6

Vancouver

Benavides M, Bonnet S, Le Moigne FAC, Armin G, Inomura K, Hallstrøm S et al. Sinking Trichodesmium fixes nitrogen in the dark ocean. The ISME Journal. 2022;16(10):2398-2405. https://doi.org/10.1038/s41396-022-01289-6

Author

Benavides, Mar ; Bonnet, Sophie ; Le Moigne, Frédéric A. C. ; Armin, Gabrielle ; Inomura, Keisuke ; Hallstrøm, Søren ; Riemann, Lasse ; Berman-Frank, Ilana ; Poletti, Emilie ; Garel, Marc ; Grosso, Olivier ; Leblanc, Karine ; Guigue, Catherine ; Tedetti, Marc ; Dupouy, Cécile. / Sinking Trichodesmium fixes nitrogen in the dark ocean. In: The ISME Journal. 2022 ; Vol. 16, No. 10. pp. 2398-2405.

Bibtex

@article{b432ff70c0eb42faad4573581a7df0d6,
title = "Sinking Trichodesmium fixes nitrogen in the dark ocean",
abstract = "The photosynthetic cyanobacterium Trichodesmium is widely distributed in the surface low latitude ocean where it contributes significantly to N2 fixation and primary productivity. Previous studies found nifH genes and intact Trichodesmium colonies in the sunlight-deprived meso- and bathypelagic layers of the ocean (200–4000 m depth). Yet, the ability of Trichodesmium to fix N2 in the dark ocean has not been explored. We performed 15N2 incubations in sediment traps at 170, 270 and 1000 m at two locations in the South Pacific. Sinking Trichodesmium colonies fixed N2 at similar rates than previously observed in the surface ocean (36–214 fmol N cell−1 d−1). This activity accounted for 40 ± 28% of the bulk N2 fixation rates measured in the traps, indicating that other diazotrophs were also active in the mesopelagic zone. Accordingly, cDNA nifH amplicon sequencing revealed that while Trichodesmium accounted for most of the expressed nifH genes in the traps, other diazotrophs such as Chlorobium and Deltaproteobacteria were also active. Laboratory experiments simulating mesopelagic conditions confirmed that increasing hydrostatic pressure and decreasing temperature reduced but did not completely inhibit N2 fixation in Trichodesmium. Finally, using a cell metabolism model we predict that Trichodesmium uses photosynthesis-derived stored carbon to sustain N2 fixation while sinking into the mesopelagic. We conclude that sinking Trichodesmium provides ammonium, dissolved organic matter and biomass to mesopelagic prokaryotes.",
author = "Mar Benavides and Sophie Bonnet and {Le Moigne}, {Fr{\'e}d{\'e}ric A. C.} and Gabrielle Armin and Keisuke Inomura and S{\o}ren Hallstr{\o}m and Lasse Riemann and Ilana Berman-Frank and Emilie Poletti and Marc Garel and Olivier Grosso and Karine Leblanc and Catherine Guigue and Marc Tedetti and C{\'e}cile Dupouy",
year = "2022",
doi = "10.1038/s41396-022-01289-6",
language = "English",
volume = "16",
pages = "2398--2405",
journal = "I S M E Journal",
issn = "1751-7362",
publisher = "nature publishing group",
number = "10",

}

RIS

TY - JOUR

T1 - Sinking Trichodesmium fixes nitrogen in the dark ocean

AU - Benavides, Mar

AU - Bonnet, Sophie

AU - Le Moigne, Frédéric A. C.

AU - Armin, Gabrielle

AU - Inomura, Keisuke

AU - Hallstrøm, Søren

AU - Riemann, Lasse

AU - Berman-Frank, Ilana

AU - Poletti, Emilie

AU - Garel, Marc

AU - Grosso, Olivier

AU - Leblanc, Karine

AU - Guigue, Catherine

AU - Tedetti, Marc

AU - Dupouy, Cécile

PY - 2022

Y1 - 2022

N2 - The photosynthetic cyanobacterium Trichodesmium is widely distributed in the surface low latitude ocean where it contributes significantly to N2 fixation and primary productivity. Previous studies found nifH genes and intact Trichodesmium colonies in the sunlight-deprived meso- and bathypelagic layers of the ocean (200–4000 m depth). Yet, the ability of Trichodesmium to fix N2 in the dark ocean has not been explored. We performed 15N2 incubations in sediment traps at 170, 270 and 1000 m at two locations in the South Pacific. Sinking Trichodesmium colonies fixed N2 at similar rates than previously observed in the surface ocean (36–214 fmol N cell−1 d−1). This activity accounted for 40 ± 28% of the bulk N2 fixation rates measured in the traps, indicating that other diazotrophs were also active in the mesopelagic zone. Accordingly, cDNA nifH amplicon sequencing revealed that while Trichodesmium accounted for most of the expressed nifH genes in the traps, other diazotrophs such as Chlorobium and Deltaproteobacteria were also active. Laboratory experiments simulating mesopelagic conditions confirmed that increasing hydrostatic pressure and decreasing temperature reduced but did not completely inhibit N2 fixation in Trichodesmium. Finally, using a cell metabolism model we predict that Trichodesmium uses photosynthesis-derived stored carbon to sustain N2 fixation while sinking into the mesopelagic. We conclude that sinking Trichodesmium provides ammonium, dissolved organic matter and biomass to mesopelagic prokaryotes.

AB - The photosynthetic cyanobacterium Trichodesmium is widely distributed in the surface low latitude ocean where it contributes significantly to N2 fixation and primary productivity. Previous studies found nifH genes and intact Trichodesmium colonies in the sunlight-deprived meso- and bathypelagic layers of the ocean (200–4000 m depth). Yet, the ability of Trichodesmium to fix N2 in the dark ocean has not been explored. We performed 15N2 incubations in sediment traps at 170, 270 and 1000 m at two locations in the South Pacific. Sinking Trichodesmium colonies fixed N2 at similar rates than previously observed in the surface ocean (36–214 fmol N cell−1 d−1). This activity accounted for 40 ± 28% of the bulk N2 fixation rates measured in the traps, indicating that other diazotrophs were also active in the mesopelagic zone. Accordingly, cDNA nifH amplicon sequencing revealed that while Trichodesmium accounted for most of the expressed nifH genes in the traps, other diazotrophs such as Chlorobium and Deltaproteobacteria were also active. Laboratory experiments simulating mesopelagic conditions confirmed that increasing hydrostatic pressure and decreasing temperature reduced but did not completely inhibit N2 fixation in Trichodesmium. Finally, using a cell metabolism model we predict that Trichodesmium uses photosynthesis-derived stored carbon to sustain N2 fixation while sinking into the mesopelagic. We conclude that sinking Trichodesmium provides ammonium, dissolved organic matter and biomass to mesopelagic prokaryotes.

U2 - 10.1038/s41396-022-01289-6

DO - 10.1038/s41396-022-01289-6

M3 - Journal article

C2 - 35835942

VL - 16

SP - 2398

EP - 2405

JO - I S M E Journal

JF - I S M E Journal

SN - 1751-7362

IS - 10

ER -

ID: 314070109