Karsten Kristiansen

Karsten Kristiansen

Professor

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    ORCID: 0000-0002-6024-0917

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    1. Published

      Eosinophilic airway inflammation in asthmatic patients is associated with an altered airway microbiome

      Sverrild, Asger, Kiilerich, P., Brejnrod, A. D., Pedersen, R., Porsbjerg, Celeste Michala, Bergqvist, A., Erjefält, J. S., Kristiansen, Karsten & Backer, Vibeke, Aug 2017, In: Journal of Allergy and Clinical Immunology. 140, 2, p. 407-417 e11.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Site-specific strand bias in gene correction using single-stranded oligonucleotides

      Sørensen, C. B., Krogsdam, A., Andersen, M. S., Kristiansen, Karsten, Bolund, L. & Jensen, T. G., 2004, In: Journal of Molecular Medicine. 83, 1, p. 39-49 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

      Sørensen, L. M., Jensen, J. M., Petersen, B., Sibbesen, J. A., Liu, S., Villesen, P., Skov, L., Belling, K. G., Have, C. T., Izarzugaza, J. M. G., Grosjean, M., Bork-Jensen, J., Grove, J., Als, T. D., Huang, S., Chang, Y., Xu, R., Ye, W., Rao, J., Guo, X. & 39 others, Sun, J., Cao, H., Ye, C., van Beusekom, J., Espeseth, T., Flindt, E., Friborg, R. M., Halager, A. E., Le Hellard, S., Hultman, C. M., Lescai, F., Li, S., Lund, O., Løngren, P., Mailund, T., Matey-Hernandez, M. L., Mors, O., Pedersen, C. N. S., Sicheritz-Pontén, T., Sullivan, P., Syed, A., Westergaard, David, Yadav, R., Li, N., Xu, X., Hansen, Torben, Krogh, Anders, Bolund, L., Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Gupta, R., Rasmussen, Simon, Besenbacher, S., Børglum, A. D., Wang, J., Eiberg, Hans Rudolf Lytchoff, Kristiansen, Karsten, Brunak, Søren & Schierup, M. H., 2017, In: Nature. 548, 7665, p. 87-91 5 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    4. Analysis of beta-catenin, Ki-ras, and microsatellite stability in azoxymethane-induced colon tumors of BDIX/Orl Ico rats

      Sørensen, N. M., Kobaek-Larsen, M., Bonne, A., van Zutphen, B., Fenger, C., Kristiansen, Karsten & Ritskes-Hoitinga, M., 2003, In: Comparative Medicine. 53, 6, p. 633-8 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      A Mixture of cod and scallop protein reduces adiposity and improves glucose tolerance in high-fat fed male C57BL/6J mice

      Tastesen, H. S., Rønnevik, A. K., Borkowski, K., Madsen, L., Kristiansen, Karsten & Liaset, B., 2014, In: P L o S One. 9, 11, 12 p., e112859.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Scallop protein with endogenous high taurine and glycine content prevents high-fat, high-sucrose-induced obesity and improves plasma lipid profile in male C57BL/6J mice

      Tastesen, H. S., Keenan, A. H., Madsen, L., Kristiansen, Karsten & Liaset, B., 2014, In: Amino Acids. 46, 7, p. 1659-1671 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Effects of Lifetime Exposures to Environmental Contaminants on the Adult Gut Microbiome

      Thompson, K. N., Oulhote, Y., Weihe, P., Wilkinson, J. E., Ma, S., Zhong, H., Li, J., Kristiansen, Karsten, Huttenhower, C. & Grandjean, P., 2022, In: Environmental Science & Technology. 56, 23, p. 16985-16995 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. A val-val sequence found in a human monocytic leukemia lysozyme

      Thomsen, J., Lund, E., Kristiansen, Karsten, Brunfeldt, K. & Malmquist, J., 1972, In: FEBS Letters. 22, 1, p. 34-36 2 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. The amino acid sequence of human glucagon

      Thomsen, J., Kristiansen, Karsten, Brunfeldt, K. & Sundby, F., 1972, In: FEBS Letters. 21, 3, p. 315-319 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Importance of the fat content within the cheese-matrix for blood lipid profile, faecal fat excretion, and gut microbiome in growing pigs

      Thorning, T. K., Raben, Anne, Bendsen, N. T., Jørgensen, H. J. H., Kiilerich, P., Ardö, Ylva Margareta, Lorenzen, J. K., Kristiansen, Karsten & Astrup, A., 2016, In: International Dairy Journal. 61, p. 67-75 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data

      Tian, Q., Guo, Q., Guo, Y., Luo, L., Kristiansen, Karsten, Han, Z., Fang, H. & Zhang, S., 2022, In: Genomics. 114, 2, 10 p., 110293.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Treatment with the anti-IgE monoclonal antibody omalizumab in women with asthma undergoing fertility treatment: a proof-of-concept study - The PRO-ART study protocol

      Tidemandsen, C., Juul Gade, E., Ulrik, Charlotte Suppli, Nielsen, Henriette Svarre, Oxlund-Mariegaard, B. S., Kristiansen, Karsten, Freiesleben, Nina la Cour, Nøhr, B., Udengaard, H. & Backer, Vibeke, 2020, In: BMJ Open. 10, 11, 7 p., e037041.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Cold-stimulated brown adipose tissue activation is related to changes in serum metabolites relevant to NAD+ metabolism in humans

      U-Din, M., de Mello, V. D., Tuomainen, M., Raiko, J., Niemi, T., Fromme, T., Klåvus, A., Gautier, N., Haimilahti, K., Lehtonen, M., Kristiansen, Karsten, Newman, J. W., Pietiläinen, K. H., Pihlajamäki, J., Amri, E. Z., Klingenspor, M., Nuutila, P., Pirinen, E., Hanhineva, K. & Virtanen, K. A., 26 Sep 2023, In: Cell Reports. 42, 9, 23 p., 113131.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Inversin/Nephrocystin-2 is required for fibroblast polarity and directional cell migration

      Veland, I. R., Montjean, R., Eley, L., Pedersen, Lotte Bang, Schwab, A., Goodship, J., Kristiansen, Karsten, Pedersen, Stine Helene Falsig, Saunier, S. & Christensen, Søren Tvorup, 2013, In: P L o S One. 8, 4, 15 p., e60193.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Gut microbiota signatures in inflammatory bowel disease

      Vestergaard, M. V., Allin, K. H., Eriksen, C., Zakerska-Banaszak, O., Arasaradnam, R. P., Alam, M. T., Kristiansen, Karsten, Brix, S. & Jess, T., 2024, In: United European Gastroenterology Journal. 12, 1, p. 22-33 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      Proteomic Analysis of the Protective Effect of Eriodictyol on Benzo(a)pyrene-Induced Caco-2 Cytotoxicity

      Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Frontiers in Nutrition. 9, 14 p., 839364.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      In vitro digestion mimicking conditions in young and elderly reveals marked differences between profiles and potential bioactivity of peptides from meat and soy proteins

      Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Food Research International. 157, 11 p., 111215.

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Effect of gastrointestinal alterations mimicking elderly conditions on in vitro digestion of meat and soy proteins

      Wang, Chong, Zhao, Fan, Bai, Y., Li, C., Xu, X., Kristiansen, Karsten & Zhou, G., 2022, In: Food Chemistry. 383, 9 p., 132465.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation

      Wang, D., Yang, X., Ren, Z., Hu, B., Zhao, H., Yang, K., Shi, P., Zhang, Z., Feng, Q., Nawenja, C. V., Obanda, V., Robert, K., Nalikka, B., Waruhiu, C. N., Ochola, G. O., Onyuok, S. O., Ochieng, H., Li, B., Zhu, Y., Si, H. & 9 others, Yin, J., Kristiansen, Karsten, Jin, X., Xu, X., Xiao, M., Agwanda, B., Ommeh, S., Li, J. & Shi, Z. L., 2024, In: Microbiome. 12, 1, 17 p., 72.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      The diploid genome sequence of an Asian individual

      Wang, J., Wang, W., Li, R., Li, Y., Tian, G., Goodman, L., Fan, W., Zhang, J., Li, J., Zhang, J., Guo, Y., Feng, B., Li, H., Lu, Y., Fang, X., Liang, H., Du, Z., Li, D., Zhao, Y., Hu, Y. & 57 others, Yang, Z., Zheng, H., Hellmann, I., Inouye, M., Pool, J., Yi, X., Zhao, J., Duan, J., Zhou, Y., Qin, J., Ma, L., Li, G., Yang, Z., Zhang, G., Yang, B., Yu, C., Liang, F., Li, W., Li, S., Li, D., Ni, P., Ruan, J., Li, Q., Zhu, H., Liu, D., Lu, Z., Li, N., Guo, G., Zhang, J., Ye, J., Fang, L., Hao, Q., Chen, Q., Liang, Y., Su, Y., San, A., Ping, C., Yang, S., Chen, F., Li, L., Zhou, K., Zheng, H., Ren, Y., Yang, L., Gao, Y., Yang, G., Li, Z., Feng, X., Kristiansen, Karsten, Wong, G. K., Nielsen, Rasmus, Durbin, R., Bolund, L., Zhang, X., Li, S., Yang, H. & Wang, J., 2008, In: Nature. 456, 7218, p. 60-65 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Efficient and unique cobarcoding of second-generation sequencing reads from long DNA molecules enabling cost-effective and accurate sequencing, haplotyping, and de novo assembly

      Wang, O., Chin, R., Cheng, X., Wu, M. K. Y., Mao, Q., Tang, J., Sun, Y., Anderson, E., Lam, H. K., Chen, D., Zhou, Y., Wang, L., Fan, F., Zou, Y., Xie, Y., Zhang, R. Y., Drmanac, S., Nguyen, D., Xu, C., Villarosa, C. & 19 others, Gablenz, S., Barua, N., Nguyen, S., Tian, W., Liu, J. S., Wang, J., Liu, X., Qi, X., CHEN, Ao, Wang, H., Dong, Y., Zhang, W., Alexeev, A., Yang, H., Wang, J., Kristiansen, Karsten, Xu, X., Drmanac, R. & Peters, B. A., 2019, In: Genome Research. 29, 5, p. 798-808

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Origin and evolution of new exons in rodents

      Wang, W., Zheng, H., Yang, S., Yu, H., Li, J., Jiang, H., Su, J., Yang, L., Zhang, J., McDermott, J., Samudrala, R., Wang, J., Yang, H., Yu, J., Kristiansen, Karsten, Wong, G. K. & Wang, J., 2005, In: Genome Research. 15, 9, p. 1258-64 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Quercetin enhances adiponectin secretion by a PPAR-gamma independent mechanism

      Wein, S., Behm, N., Petersen, R. K., Kristiansen, Karsten & Wolffram, S., 11 Sep 2010, In: European Journal of Pharmaceutical Sciences. 41, 1, p. 16-22 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns

      Weischenfeldt, Joachim Lütken, Waage, J. E., Tian, G., Zhao, J., Damgaard, I., Jakobsen, J. S., Kristiansen, Karsten, Krogh, Anders, Wang, J. & Porse, Bo Torben, 2012, In: Genome Biology (Online Edition). 13, 5, 19 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Modulation of keratinocyte gene expression and differentiation by PPAR-selective ligands and tetradecylthioacetic acid

      Westergaard, M., Henningsen, J., Svendsen, M. L., Johansen, C., Jensen, U. B., Schrøder, H. D., Kratchmarova, I., Berge, R. K., Iversen, L., Bolund, L., Kragballe, K. & Kristiansen, Karsten, 2001, In: Journal of Investigative Dermatology. 116, 5, p. 702-12 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Expression and localization of peroxisome proliferator-activated receptors and nuclear factor kappaB in normal and lesional psoriatic skin.

      Westergaard, M., Henningsen, J., Johansen, C., Rasmussen, S., Svendsen, M. L., Jensen, U. B., Schrøder, H. D., Staels, B., Iversen, L., Bolund, L., Kragballe, K. & Kristiansen, Karsten, 2003, In: Journal of Investigative Dermatology. 121, 5, p. 1104-17 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    27. Published

      Discovery of new PPARγ agonists based on arylopeptoids

      Worm-Leonhard, K., Hjelmgaard, T., Petersen, R. K., Kristiansen, Karsten & Nielsen, J., 2013, In: Bioorganic & Medicinal Chemistry Letters. 23, p. 4162-4165 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    28. Published

      Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells

      Wu, L., Zhang, X., Zhao, Z., Wang, L., Li, B., Li, G., Dean, M., Yu, Q., Wang, Y., Lin, X., Rao, W., Mei, Z., Li, Y., Jiang, R., Yang, H., Li, F., Xie, G., Xu, L., Wu, K., Zhang, J. & 9 others, Chen, J., Wang, T., Kristiansen, Karsten, Zhang, X., Li, Y., Yang, H., Wang, J., Hou, Y. & Xu, X., 2015, In: GigaScience. 4, 17 p., 51.

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      Ursolic acid induces cell death and modulates autophagy through JNK pathway in apoptosis-resistant colorectal cancer cells

      Xavier, C. P. R., Lima, C. F., Pedro, D. F. N., Wilson, J. M., Kristiansen, Karsten & Pereira-Wilson, C., 2013, In: Journal of Nutritional Biochemistry. 24, 4, p. 706-712 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    30. Published

      Single base-resolution methylome of the silkworm reveals a sparse epigenomic map

      Xiang, H., Zhu, J., Chen, Q., Dai, F., Li, X., Li, M., Zhang, H., Zhang, G., Li, D., Dong, Y., Zhao, L., Lin, Y., Cheng, D., Yu, J., Sun, J., Zhou, X., Ma, K., He, Y., Zhao, Y., Guo, S. & 13 others, Ye, M., Guo, G., Li, Y., Li, R., Zhang, X., Ma, L., Kristiansen, Karsten, Guo, Q., Jiang, J., Beck, S., Xia, Q., Wang, W. & Wang, J., 2010, In: Nature Biotechnology. 28, 5, p. 516-20 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      A reference gene catalogue of the pig gut microbiome

      Xiao, L., Estellé, J., Kiilerich, P., Ramayo-Caldas, Y., Xia, Z., Feng, Q., Liang, S., Pedersen, A. Ø., Kjeldsen, N. J., Liu, C., Maguin, E., Doré, J., Pons, N., Le Chatelier, E., Prifti, E., Li, J., Jia, H., Liu, X., Xu, X., Ehrlich, S. D. & 4 others, Madsen, L., Kristiansen, Karsten, Rogel-Gaillard, C. & Wang, J., 2016, In: Nature Microbiology. 1, 6 p., 16161.

      Research output: Contribution to journal › Letter › Research › peer-review

    32. Published

      A catalog of the mouse gut metagenome: [incl. Author Correction]

      Xiao, L., Feng, Q., Liang, S., Sonne, S. B., Xia, Z., Qiu, X., Li, X., Long, H., Zhang, J., Zhang, D., Liu, C., Fang, Z., Chou, J., Glanville, J., Hao, Q., Kotowska, D. E., Colding, C. S., Licht, T. R., Wu, D., Yu, J. & 17 others, Sung, J. J. Y., Liang, Q., Li, J., Jia, H., Lan, Z., Tremaroli, V., Dworzynski, P., Nielsen, H. B., Bäckhed, G. F., Dore, J., Le Chatelier, E., Ehrlich, S. D., Lin, J. C., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 2015, In: Nature Biotechnology. 33, 10, p. 1103-1108 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    33. Published

      High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice

      Xiao, L., Sonne, S. B., Feng, Q., Chen, N., Xia, Z., Li, X., Fang, Z., Zhang, D., Fjære, E., Midtbø, L. K., Derrien, M., Hugenholtz, F., Tang, L., Li, J., Zhang, J., Liu, C., Hao, Q., Vogel, U. B., Mortensen, A., Kleerebezem, M. & 8 others, Licht, T. R., Yang, H., Wang, J., Li, Y., Arumugam, Mani, Wang, J., Madsen, L. & Kristiansen, Karsten, 8 Apr 2017, In: Microbiome. 5, 12 p., 43.

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      Shotgun metagenomics of 250 adult twins reveals genetic and environmental impacts on the gut microbiome

      Xie, H., Guo, R., Zhong, H., Feng, Q., Lan, Z., Qin, B., Ward, K. J., Jackson, M. A., Xia, Y., Chen, X., Chen, B., Xia, H., Xu, C., Li, F., Xu, X., Al-Aama, J. Y., Yang, H., Wang, J., Kristiansen, K., Wang, J. & 5 others, Steves, C. J., Bell, J. T., Li, J., Spector, T. D. & Jia, H., 2016, In: Cell Systems. 3, 6, p. 572-584.e3 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    35. Published

      Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data

      Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.

      Research output: Contribution to journal › Journal article › Research › peer-review

    36. Published

      An esophageal squamous cell carcinoma classification system that reveals potential targets for therapy

      Xiong, T., Wang, M., Zhao, J., Liu, Q., Yang, C., Luo, W., Li, X., Yang, H., Kristiansen, Karsten, Roy, B. & Zhou, Y., 25 Jul 2017, In: OncoTarget. 8, 30, p. 49851-49860 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    37. Published

      Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma

      Xu, L., Ma, Y., Fang, Chao, Peng, Z., Gao, F., Moll, J. M., Qin, S., Yu, Q., Hou, Y., Kristiansen, Karsten, Fang, W., Brix, S. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 11 p., 953884.

      Research output: Contribution to journal › Journal article › Research › peer-review

    38. Published

      An efficient pipeline for ancient DNA mapping and recovery of endogenous ancient DNA from whole-genome sequencing data

      Xu, W., Lin, Y., Zhao, K., Li, H., Tian, Y., Ngatia, J. N., Ma, Y., Sahu, S. K., Guo, H., Guo, X., Xu, Y. C., Liu, Huan, Kristiansen, Karsten, Lan, T. & Zhou, X., 2021, In: Ecology and Evolution. 11, 1, p. 390-401 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    39. Published

      Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

      Xu, X., Liu, X., Ge, S., Jensen, J. D., Hu, F., Li, X., Dong, Y., Gutenkunst, R. N., Fang, L., Huang, L., Li, J., He, W., Zhang, G., Zheng, X., Zhang, F., Li, Y., Yu, C., Kristiansen, K., Zhang, X., Wang, J. & 5 others, Wright, M., McCouch, S., Nielsen, Rasmus, Wang, J. & Wang, W., 2012, In: Nature Biotechnology. 30, 1, p. 105-111 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    40. Published

      Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor: Cell

      Xu, X., Hou, Y., Yin, X., Bao, L., Tang, A., Song, L., Li, F., Tsang, S., Wu, K., Wu, H., He, W., Zeng, L., Xing, M., Wu, R., Jiang, H., Liu, X., Cao, D., Guo, G., Hu, X., Gui, Y. & 19 others, Li, Z., Xie, W., Sun, X., Shi, M., Cai, Z., Wang, B., Zhong, M., Li, J., Lu, Z., Gu, N., Zhang, X., Goodman, L., Bolund, L., Wang, J., Yang, H., Kristiansen, Karsten, Dean, M., Li, Y. & Wang, J., 2012, In: Cell. 148, 5, p. 886-895 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    41. Published

      Assessment of fecal DNA extraction protocols for metagenomic studies

      Yang, F., Sun, J., Luo, H., Ren, H., Zhou, H., Lin, Y., Han, Mo, Chen, B., Liao, H., Brix, S., Li, J., Yang, H., Kristiansen, Karsten & Zhong, H., 2020, In: GigaScience. 9, 7, 12 p., giaa071.

      Research output: Contribution to journal › Journal article › Research › peer-review

    42. Published

      Multi-block PCA and multi-compartmental study of the metabolic responses to intake of hydrolysed versus intact casein in C57BL/6J mice by NMR-based metabolomics

      Yde, C. C., Clausen, M. R., Ditlev, D. B., Lillefosse, H., Madsen, L., Kristiansen, Karsten, Liaset, B. & Bertram, H. C. S., 2014, In: Metabolomics. 10, 5, p. 938-949 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    43. Published

      Comprehensive targeted super-deep next generation sequencing enhances differential diagnosis of solitary pulmonary nodules

      Ye, M., Li, S., Huang, W., Wang, C., Liu, L., Liu, J., Liu, J., Pan, H., Deng, Q., Tang, H., Jiang, L., Huang, W., Chen, X., Shao, D., Peng, Z., Wu, R., Zhong, J., Wang, Z., Zhang, X., Kristiansen, K. & 5 others, Wang, J., Yin, Y., Mao, M., He, J. & Liang, W., 2018, In: Journal of Thoracic Disease. 10, Suppl. 7, p. S820-S829 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      Sequencing of 50 human exomes reveals adaptation to high altitude

      Yi, X., Liang, Y., Huerta-Sanchez, E., Jin, X., Cuo, Z. X. P., Pool, J. E., Xu, X., Jiang, H., Vinckenbosch, N., Korneliussen, T. S., Zheng, H., Liu, T., He, W., Li, K., Luo, R., Nie, X., Wu, H., Zhao, M., Cao, H., Zou, J. & 50 others, Shan, Y., Li, S., Yang, Q., Asan, G., Ni, P., Tian, G., Xu, J., Liu, X., Jiang, T., Wu, R., Zhou, G., Tang, M., Qin, J., Wang, T., Feng, S., Li, G., Huasang, G., Luosang, J., Wang, W., Chen, F., Wang, Y., Zheng, X., Li, Z., Bianba, Z., Yang, G., Wang, X., Tang, S., Gao, G., Yong, C., Luo, Z., Gusang, L., Cao, Z., Zhang, Q., Ouyang, W., Ren, X., Liang, H., Zheng, H., Huang, Y., Li, J., Bolund, L., Kristiansen, Karsten, Li, Y., Zhang, Y., Zhang, X., Li, R., Li, S., Yang, H., Nielsen, Rasmus, Wang, J. & Wang, J., 2 Jul 2010, In: Science. 329, 5987, p. 75-8 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      The draft genome of mandrill (Mandrillus sphinx): an Old World monkey

      Yin, Y., Yang, T., Liu, Huan, Huang, Z., Zhang, Y., Song, Y., Wang, W., Guang, X., Sahu, S. K. & Kristiansen, Karsten, 2020, In: Scientific Reports. 10, 8 p., 2431.

      Research output: Contribution to journal › Journal article › Research › peer-review

    46. Published

      Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer

      Yu, J., Feng, Q., Wong, S. H., Zhang, D., Liang, Q. Y., Qin, Y., Tang, L., Zhao, H., Stenvang, J., Li, Y., Wang, X., Xu, X., Chen, N., Wu, W. K. K., Al-Aama, J., Nielsen, H. J., Kiilerich, P., Jensen, B. A. H., Yau, T. O., Lan, Z. & 19 others, Jia, H., Li, J., Xiao, L., Lam, T. Y. T., Ng, S. C., Cheng, A. S., Wong, V. W., Chan, F. K. L., Xu, X., Yang, H., Madsen, L., Datz, C., Tilg, H., Wang, J., Brünner, N., Kristiansen, Karsten, Arumugam, Mani, Sung, J. J. & Wang, J., 2017, In: Gut. 66, p. 70-78 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    47. Published

      Impact of a 3-Months Vegetarian Diet on the Gut Microbiota and Immune Repertoire

      Zhang, C., Björkman, A., Cai, K., Liu, G., Wang, C., Li, Y., Xia, H., Sun, L., Kristiansen, Karsten, Wang, J., Han, J., Hammarström, L. & Pan-Hammarström, Q., 2018, In: Frontiers in Immunology. 9, 13 p., 908.

      Research output: Contribution to journal › Journal article › Research › peer-review

    48. Published

      Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

      Zhang, G., Guo, G., Hu, X., Zhang, Y., Li, Q., Li, R., Zhuang, R., Lu, Z., He, Z., Fang, X., Chen, L., Tian, W., Tao, Y., Kristiansen, Karsten, Zhang, X., Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Genome Research. 20, 5, p. 646-54 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    49. Insulin-like Growth Factor-1/Insulin Bypasses Pref-1/FA1-mediated Inhibition of Adipocyte Differentiation

      Zhang, H., Nøhr, J., Jensen, C. H., Petersen, R. K., Bachmann, E., Teisner, B., Larsen, L. K., Mandrup, S. & Kristiansen, Karsten, 2003, In: Journal of Biological Chemistry. 278, 23, p. 20906-14 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    50. Published

      Cross talk between insulin and bone morphogenetic protein signaling systems in brown adipogenesis

      Zhang, H., Schulz, T. J., Espinoza, D. O., Huang, T. L., Emanuelli, Brice, Kristiansen, Karsten & Tseng, Y., 1 Sep 2010, In: Molecular and Cellular Biology. 30, 17, p. 4224-33 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    51. Published

      MicroRNA-455 regulates brown adipogenesis via a novel HIF1an-AMPK-PGC1α signaling network

      Zhang, H., Guan, M., Townsend, K. L., Huang, T. L., An, D., Yan, X., Xue, R., Schulz, T. J., Winnay, J., Mori, M., Hirshman, M. F., Kristiansen, Karsten, Tsang, J. S., White, A. P., Cypess, A. M., Goodyear, L. J. & Tseng, Y., 2015, In: E M B O Reports. 16, 10, p. 1378-1393 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    52. Published

      Effects of Gliadin consumption on the Intestinal Microbiota and Metabolic Homeostasis in Mice Fed a High-fat Diet

      Zhang, L., Andersen, D., Roager, Henrik Munch, Bahl, M. I., Hansen, Camilla Hartmann Friis, Danneskiold-Samsøe, Niels Banhos, Kristiansen, Karsten, Radulescu, I. D., Sina, C., Frandsen, H. L., Hansen, Axel Kornerup, Brix, S., Hellgren, L. I. & Licht, T. R., 16 Mar 2017, In: Scientific Reports. 7, 13 p., 44613.

      Research output: Contribution to journal › Journal article › Research › peer-review

    53. Published

      Sex- and age-related trajectories of the adult human gut microbiota shared across populations of different ethnicities

      Zhang, X., Zhong, H., Li, Y., Shi, Z., Ren, H., Zhang, Z., Zhou, X., Tang, S., Han, X., Lin, Y., Yang, F., Wang, D., Fang, C., Fu, Z., Wang, L., Zhu, S., Hou, Y., Xu, X., Yang, H., Wang, J. & 3 others, Kristiansen, Karsten, Li, J. & Ji, L., 2021, In: Nature Aging. 1, 1, p. 87-100 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    54. Published

      The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment

      Zhang, X., Zhang, D., Jia, H., Feng, Q., Wang, D., Liang, D., Wu, X., Li, J., Tang, L., Li, Y., Lan, Z., Chen, B., Li, Y., Zhong, H., Xie, H., Jie, Z., Chen, W., Tang, S., Xu, X., Wang, X. & 28 others, Cai, X., Liu, S., Xia, Y., Li, J., Qiao, X., Al-Aama, J. Y., Chen, H., Wang, L., Wu, Q., Zhang, F., Zheng, W., Li, Y., Zhang, M., Luo, G., Xue, W., Xiao, L., Li, J., Chen, W., Xu, X., Yin, Y., Yang, H., Wang, J., Kristiansen, Karsten, Liu, L., Li, T., Huang, Q., Li, Y. & Wang, J., 2015, In: Nature Medicine. 21, 8, p. 895-905 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    55. Published

      Intake of a Chicken Protein-Based or Soy Protein-Based Diet Differentially Affects Growth Performance, Absorptive Capacity, and Gut Microbiota in Young Rats

      Zhao, Fan, Wang, Chong, Song, S., Fang, C., Kristiansen, Karsten & Li, C., 2022, In: Molecular Nutrition and Food Research. 66, 13, 14 p., 2101124.

      Research output: Contribution to journal › Journal article › Research › peer-review

    56. Published

      Proteomics and Metabolomics Profiling of Pork Exudate Reveals Meat Spoilage during Storage

      Zhao, Fan, Wei, Z., Bai, Y., Li, C., Zhou, G., Kristiansen, Karsten & Wang, Chong, 2022, In: Metabolites. 12, 7, 15 p., 570.

      Research output: Contribution to journal › Journal article › Research › peer-review

    57. Published

      Casein and red meat proteins differentially affect the composition of the gut microbiota in weaning rats

      Zhao, Fan, Wang, Chong, Song, S., Fang, C., Zhou, G., Li, C. & Kristiansen, Karsten, 2022, In: Food Chemistry. 397, 11 p., 133769.

      Research output: Contribution to journal › Journal article › Research › peer-review

    58. Published

      Dietary Protein Sources Differentially Affect the Growth of Akkermansia muciniphila and Maintenance of the Gut Mucus Barrier in Mice

      Zhao, F., Zhou, G., Liu, X., Song, S., Xu, X., Hooiveld, G., Müller, M., Liu, L., Kristiansen, Karsten & Li, C., 2019, In: Molecular Nutrition & Food Research. 63, 23, 11 p., 1900589.

      Research output: Contribution to journal › Journal article › Research › peer-review

    59. Published

      Effects of Different Storage Temperatures on Bacterial Communities and Functional Potential in Pork Meat

      Zhao, Fan, Wei, Z., Zhou, G., Kristiansen, Karsten & Wang, Chong, 2022, In: Foods. 11, 15, 12 p., 2307.

      Research output: Contribution to journal › Journal article › Research › peer-review

    60. Published

      Reply to: Transformation of naked mole-rat cells

      Zhao, J., Tian, X., Zhu, Y., Zhang, Z., Rydkina, E., Yuan, Y., Zhang, H., Roy, B., Cornwell, A., Nevo, E., Shang, X., Huang, R., Kristiansen, Karsten, Seluanov, A., Fang, X. & Gorbunova, V., 2020, In: Nature. 583, 7814, p. E8-E13

      Research output: Contribution to journal › Letter › Research › peer-review

    61. FGF: a web tool for Fishing Gene Family in a whole genome database

      Zheng, H., Shi, J., Fang, X., Li, Y., Vang, S., Fan, W., Wang, J., Zhang, Z., Wang, W., Kristiansen, Karsten & Wang, J., 2007, In: Nucleic Acids Symposium Series. 35, Web Server issue, p. W121-125

      Research output: Contribution to journal › Journal article › Research › peer-review

    62. Published

      Distinct gut metagenomics and metaproteomics signatures in prediabetics and treatment-naïve type 2 diabetics

      Zhong, H., Ren, H., Lu, Y., Fang, C., Hou, G., Yang, Z., Chen, B., Yang, F., Zhao, Y., Shi, Z., Zhou, B., Wu, J., Zou, H., Zi, J., Chen, J., Bao, X., Hu, Y., Gao, Y., Zhang, J., Xu, X. & 10 others, Hou, Y., Yang, H., Wang, J., Liu, S., Jia, H., Madsen, L., Brix, S., Kristiansen, Karsten, Liu, F. & Li, J., 2019, In: EBioMedicine. 47, p. 373-383 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    63. Published

      Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patients

      Zhong, H., Wang, Y., Shi, Z., Zhang, L., Ren, H., He, W., Zhang, Z., Zhu, A., Zhao, J., Xiao, F., Yang, F., Liang, T., Ye, F., Zhong, B., Ruan, S., Gan, M., Zhu, J., Li, F., Li, F., Wang, D. & 13 others, Li, J., Ren, P., Zhu, S., Yang, H., Wang, J., Kristiansen, Karsten, Tun, H. M., Chen, W., Zhong, N., Xu, X., Li, Y., Li, J. & Zhao, J., 2021, In: Cell Discovery. 7, 14 p., 23.

      Research output: Contribution to journal › Journal article › Research › peer-review

    64. Published

      Impact of early events and lifestyle on the gut microbiota and metabolic phenotypes in young school-age children

      Zhong, H., Penders, J., Shi, Z., Ren, H., Cai, K., Fang, Chao, Ding, Q., Thijs, C., Blaak, E. E., Stehouwer, C. D. A., Xu, X., Yang, H., Wang, J., Wang, J., Jonkers, D. M. A. E., Masclee, A. A. M., Brix, S., Li, J., Arts, I. C. W. & Kristiansen, Karsten, 2019, In: Microbiome. 7, p. 1-14 2.

      Research output: Contribution to journal › Journal article › Research › peer-review

    65. Published

      Lipidomic profiling reveals distinct differences in plasma lipid composition in healthy, prediabetic, and type 2 diabetic individuals

      Zhong, H., Fang, C., Fan, Y., Lu, Y., Wen, B., Ren, H., Hou, G., Yang, F., Xie, H., Jie, Z., Peng, Y., Ye, Z., Wu, J., Zi, J., Zhao, G., Chen, J., Bao, X., Hu, Y., Gao, Y., Zhang, J. & 7 others, Yang, H., Wang, J., Madsen, L., Kristiansen, Karsten, Ni, C., Li, J. & Liu, S., Jul 2017, In: GigaScience. 6, 7, p. 1-12 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    66. Published

      Single-cell RNA-seq reveals distinct dynamic behavior of sex chromosomes during early human embryogenesis

      Zhou, Q., Wang, T., Leng, L., Zheng, W., Huang, J., Fang, F., Yang, L., Chen, F., Lin, G., Wang, W. & Kristiansen, Karsten, 2019, In: Molecular Reproduction and Development. 86, 7, p. 871-882

      Research output: Contribution to journal › Journal article › Research › peer-review

    67. Published

      Transplantation of microbiota from drug-free patients with schizophrenia causes schizophrenia-like abnormal behaviors and dysregulated kynurenine metabolism in mice

      Zhu, F., Guo, R., Wang, W., Ju, Y., Wang, Q., Ma, Q., Sun, Q., Fan, Y., Xie, Y., Yang, Z., Jie, Z., Zhao, B., Xiao, L., Yang, L., Zhang, T., Liu, B., Guo, L., He, X., Chen, Y., Chen, C. & 10 others, Gao, C., Xu, X., Yang, H., Wang, J., Dang, Y., Madsen, L., Brix, S., Kristiansen, Karsten, Jia, H. & Ma, X., 2020, In: Molecular Psychiatry. 25, 11, p. 2905-2918 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    68. Published

      Metagenome-wide association of gut microbiome features for schizophrenia

      Zhu, F., Ju, Y., Wang, W., Wang, Q., Guo, R., Ma, Q., Sun, Q., Fan, Y., Xie, Y., Yang, Z., Jie, Z., Zhao, B., Xiao, L., Yang, L., Zhang, T., Feng, J., Guo, L., He, X., Chen, Y., Chen, C. & 10 others, Gao, C., Xu, X., Yang, H., Wang, J., Dang, Y., Madsen, L., Brix, S., Kristiansen, Karsten, Jia, H. & Ma, X., 2020, In: Nature Communications. 11, 10 p., 1612.

      Research output: Contribution to journal › Journal article › Research › peer-review

    69. Published

      An Expanded Gene Catalog of Mouse Gut Metagenomes

      Zhu, J., Ren, H., Zhong, H., Li, Xiaoping, Zou, Y., Han, Mo, Li, M., Madsen, L., Kristiansen, Karsten & Xiao, L., 2021, In: mSphere. 6, 1, 12 p., e-01119-20.

      Research output: Contribution to journal › Journal article › Research › peer-review

    70. Published

      Over 50,000 Metagenomically Assembled Draft Genomes for the Human Oral Microbiome Reveal New Taxa

      Zhu, J., Tian, L., Chen, P., Han, M., Song, L., Tong, X., Sun, X., Yang, F., Lin, Z., Liu, X., Liu, C., Wang, X., Lin, Y., Cai, K., Hou, Y., Xu, X., Yang, H., Wang, J., Kristiansen, K., Xiao, L. & 3 others, Zhang, T., Jia, H. & Jie, Zhuye, 2022, In: Genomics, Proteomics and Bioinformatics. 20, 2, p. 246-259

      Research output: Contribution to journal › Journal article › Research › peer-review

    71. Published

      Characterization and description of Faecalibacterium butyricigenerans sp. nov. and F. longum sp. nov., isolated from human faeces

      Zou, Y., Lin, X., Xue, W., Tuo, L., Chen, M., Chen, X., Sun, C., Li, F., Liu, S., Dai, Y., Kristiansen, Karsten & Xiao, L., 2021, In: Scientific Reports. 11, 13 p., 11340.

      Research output: Contribution to journal › Journal article › Research › peer-review

    72. Published

      1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses

      Zou, Y., Xue, W., Luo, G., Deng, Z., Qin, P., Guo, R., Sun, H., Xia, Y., Liang, S., Dai, Y., Wan, D., Jiang, R., Su, L., Feng, Q., Jie, Z., Guo, T., Xia, Z., Liu, C., Yu, J., Lin, Y. & 11 others, Tang, S., Huo, G., Xu, X., Hou, Y., Liu, X., Wang, J., Yang, H., Kristiansen, Karsten, Li, J., Jia, H. & Xiao, L., 2019, In: Nature Biotechnology. 37, 2, p. 179-185

      Research output: Contribution to journal › Journal article › Research › peer-review

    73. Published

      Taxonomic Description and Genome Sequence of Christensenella intestinihominis sp. nov., a Novel Cholesterol-Lowering Bacterium Isolated From Human Gut

      Zou, Y., Xue, W., Lin, X., Hu, T., Liu, S., Sun, C., Luo, G., Lv, M., Dai, Y., Kristiansen, Karsten & Xiao, L., 2021, In: Frontiers in Microbiology. 12, 13 p., 632361.

      Research output: Contribution to journal › Journal article › Research › peer-review

    74. Lactate dehydrogenase isoenzyme 1 in testicular germ cell tumors

      von Eyben, F. E., Blaabjerg, O., Petersen, P. H., Mommsen, S., Madsen, E. L., Kirpekar, F., Li, S. S. & Kristiansen, Karsten, 1991, In: Recent Results in Cancer Research. 123, p. 85-92 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    75. Published

      Epigenetic Regulation of Driver Genes in Testicular Tumorigenesis

      von Eyben, F. E., Kristiansen, Karsten, Kapp, D. S., Hu, R., Preda, O. & Nogales, F. F., 2023, In: International Journal of Molecular Sciences. 24, 4, 28 p., 4148.

      Research output: Contribution to journal › Review › Research › peer-review

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