Microbiomics Lab

Microbiome Assembly and Function
The group uses advanced molecular techniques to study microbiome assembly and functionality across diverse ecosystems. From longitudinal studies on human gut microbiomes and their links to health outcomes like asthma to investigating root-associated microbial communities in plants, we strive to understand the interplay between microorganisms and their environments. We are also pioneering efforts to design “collaboromes”, synthetic microbial consortia tailored for specific functions.

Antibiotic Resistance and Genetic Adaptation
A cornerstone of our research explores the role of mobile genetic elements, such as plasmids, in facilitating HGT and antibiotic resistance. By decoding genetic exchange networks within microbial communities, we aim to uncover how these mechanisms sustain cooperation and drive bacterial adaptability. This work is crucial for tackling antibiotic resistance and understanding the stability of beneficial microbiomes.

Microbiome in healthy and sick children
We investigate microbiome structure, diversity and activities of samples from healthy and sick children and animal model systems in order to identify the microbial factor in important illnesses such as asthma and diarrhea and others.

Techniques covered:
Classic culturing
Profiling of antibiotic resistance
PCR and qPCR analysis
Metagenomics sequencing
Bioinformatic analysis

Keywords:  Microbiomes, human health, network analysis
Supervisor(s): Søren J. Sørensen
Email:  sjs@bio.ku.dk

At the Microbiomics Lab, our interdisciplinary and innovative approach pushes the boundaries of microbiological research, offering insights that pave the way for scientific breakthroughs and practical solutions to global challenges. Join us in exploring the hidden world of microbes and their extraordinary potential.