Department of Biology

 

 
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  1. 2021
  2. Published

    Indirect effects of climate change inhibit N2 fixation associated with the feathermoss Hylocomium splendens in subarctic tundra

    Alvarenga, Danillo Oliveira & Rousk, Kathrin, 2021, In: Science of the Total Environment. 795, 7 p., 148676.

    Research output: Contribution to journal › Letter › Research › peer-review

  3. Published

    Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments

    Alvarenga, Danillo Oliveira, Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D. M. & Fiore, M. F., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 5, 12 p., 004811.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    High-throughput screening alternative to crystal violet biofilm assay combining fluorescence quantification and imaging

    Amador Hierro, Cristina Isabel, Stannius, R. O., Røder, Henriette Lyng & Burmølle, Mette, 2021, In: Journal of Microbiological Methods. 190, 5 p., 106343.

    Research output: Contribution to journal › Letter › Research › peer-review

  5. Published

    A complex of BRCA2 and PP2A-B56 is required for DNA repair by homologous recombination

    Ambjørn, Sara Marie, Duxin, Julien, Hertz, Emil Peter Thrane, Nasa, I., Duro, Joana Maria, Kruse, Thomas, Lopez-Mendez, B., Rymarczyk, B., Cressey, L. E., van Overeem Hansen, T., Kettenbach, A. N., Østergaard, Vibe Hallundbæk, Lisby, Michael & Nilsson, Jakob, 2021, In: Nature Communications. 12, 1, 11 p., 5748.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Systems-wide effects of short-term feed deprivation in obese mice

    Andersen, D., Roager, Henrik Munch, Zhang, L., Moll, J. M., Frandsen, H. L., Danneskiold-Samsøe, Niels Banhos, Hansen, Axel Kornerup, Kristiansen, Karsten, Licht, T. R. & Brix, Susanne, 2021, In: Scientific Reports. 11, 11 p., 5716.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Metabolic reprogramming by driver mutation-tumor microenvironment interplay in pancreatic cancer: new therapeutic targets

    Andersen, Henriette Berg, Ialchina, Renata, Pedersen, Stine Helene Falsig & Czaplinska, D., 2021, In: Cancer and Metastasis Reviews. 40, 4, p. 1093-1114 22 p.

    Research output: Contribution to journal › Review › Research › peer-review

  8. Published

    Functional Feeding Groups of Macrofauna and Detritus Decomposition along a Gradient of Glacial Meltwater Influence in Tropical High-Andean Streams

    Andino, P., Espinosa, R., Crespo-Pérez, V., Cauvy-Fraunié, S., Dangles, O. & Jacobsen, Dean, 2021, In: Water. 13, 22, 16 p., 3303.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates

    Andrade, P., Gazda, M. A., Araújo, P. M., Afonso, S., Rasmussen, Jacob Agerbo, Marques, C. I., Lopes, R. J., Gilbert, M Thomas P & Carneiro, M., 2021, In: PLOS Genetics. 17, 2, 16 p., 1009404.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Multiple origins of a frameshift insertion in a mitochondrial gene in birds and turtles

    Andreu-Sánchez, S., Chen, W., Stiller, Josefin & KU, thw266, 2021, In: GigaScience. 10, 1, 11 p., giaa161.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Polyketide synthase genes and molecular trade-offs in the ichthyotoxic species Prymnesium parvum

    Anestis, K., Kohli, G. S., Wohlrab, S., Varga, E., Larsen, T. O., Hansen, Per Juel & John, U., 2021, In: Science of the Total Environment. 795, 10 p., 148878.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Substitutional landscape of a split fluorescent protein fragment using high-density peptide microarrays

    Antonescu, O. N., Rasmussen, A., Damm, N. A. M., Heidemann, Ditte Fogh, Popov, R., Nesterov-Mueller, A., Johansson, Kristoffer Enøe & Winther, Jakob R., 2021, In: PLoS ONE. 16, 2, 17 p., e0241461.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Diversity and Evolution of Entomocorticium (Russulales, Peniophoraceae), a Genus of Bark Beetle Mutualists Derived from Free-Living, Wood Rotting Peniophora

    Araújo, J. P. M., Li, Y., Six, D., Rajchenberg, M., Smith, M. E., Johnson, A. J., Klepzig, K. D., Crous, P. W., A. Leal-Dutra, Caio, Skelton, J., Adams, S. N. & Hulcr, J., 2021, In: Journal of Fungi. 7, 12, 26 p., 1043.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Metabolomics unveils the influence of dietary phytochemicals on residual pesticide concentrations in honey bees

    Ardalani, H., Vidkjær, Nanna Hjort, Kryger, P., Fiehn, O. & Fomsgaard, I. S., 2021, In: Environment International. 152, 10 p., 106503.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Small Intestinal Tuft Cell Activity Associates With Energy Metabolism in Diet-Induced Obesity

    Arora, P., Andersen, D., Moll, J. M., Danneskiold-Samsøe, Niels Banhos, Xu, L., Zhou, B., Kladis, G., Rausch, P., Workman, C. T., Kristiansen, Karsten & Brix, S., 2021, In: Frontiers in Immunology. 12, 13 p., 629391.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Isolation, characterization, and genome assembly of Barnettozyma botsteinii sp. nov. and novel strains of Kurtzmaniella quercitrusa isolated from the intestinal tract of the termite Macrotermes bellicosus

    Arrey Tané, Gerard, Li, G., Murphy, Rob, Guimaraes, L., Alizadeh, S., Poulsen, Michael & Regenberg, Birgitte, 2021, In: G3: Genes, Genomes, Genetics. 11, 12, 13 p., jkab342.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2

    Arribas Hernandez, Laura, Rennie, Sarah, Köster, T., Porcelli, C., Lewinski, M., Staiger, D., Andersson, Robin & Brodersen, Peter, 2021, In: eLife. 10, 33 p., e72375.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The YTHDF proteins ECT2 and ECT3 bind largely overlapping target sets and influence target mRNA abundance, not alternative polyadenylation

    Arribas Hernandez, Laura, Rennie, Sarah, Schon, M., Porcelli, C., Enugutti, B., Andersson, Robin, Nodine, M. D. & Brodersen, Peter, 2021, In: eLife. 10, 27 p., e72377.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Juvenile hormone pathway in honey bee larvae: A source of possible signal molecules for the reproductive behavior of Varroa destructor

    Aurori, C. M., Giurgiu, A. I., Conlon, B. H., Kastally, C., Dezmirean, D. S., Routtu, J. & Aurori, A., 2021, In: Ecology and Evolution. 11, 2, p. 1057-1068 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Topoisomerase II deficiency leads to a postreplicative structural shift in all Saccharomyces cerevisiae chromosomes

    Ayra-Plasencia, J., Ramos-Pérez, C., Santana-Sosa, S., Quevedo, O., Medina-Suárez, S., Matos-Perdomo, E., Zamora-Dorta, M., Brown, G. W., Lisby, Michael & Machín, F., 2021, In: Scientific Reports. 11, 16 p., 14940.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Mercury bioaccumulation pathways in tusk (Brosme brosme) from Sognefjord, Norway: Insights from C and N isotopes

    Azad, A. M., Frantzen, S., Bank, M. S., Madsen, L. & Maage, A., 2021, In: Environmental Pollution. 269, 10 p., 115997.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Distinct rhizomicrobiota assemblages and plant performance in lettuce grown in soils with different agricultural management histories

    Babin, D., Sommermann, L., Chowdhury, S. P., Behr, J. H., Sandmann, M., Neumann, G., Nesme, Joseph, Sørensen, Søren Johannes, Schellenberg, I., Rothballer, M., Geistlinger, J., Smalla, K. & Grosch, R., 2021, In: FEMS Microbiology Ecology. 97, 4, 21 p., fiab027.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Functions of TopBP1 in preserving genome integrity during mitosis

    Bagge, J., Østergaard, Vibe Hallundbæk & Lisby, Michael, 2021, In: Seminars in Cell and Developmental Biology. 113, p. 57-64 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  24. Published

    Phenological stage of tundra vegetation controls bidirectional exchange of BVOCs in a climate change experiment on a subarctic heath

    Baggesen, N., Li, Tao, Seco, Roger, Holst, T., Michelsen, Anders & Rinnan, Riikka, 2021, In: Global Change Biology. 27, 12, p. 2928-2944 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Bidirectional exchange of biogenic volatile organic compounds between subarctic heath tundra and the atmosphere

    Baggesen, N. S., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 202 p.

    Research output: Book/Report › Ph.D. thesis › Research

  26. Published

    Detecting bird’s eggs in the diet of raccoon dog (Nyctereutes procyonoides)

    Bahlke, S. Ø., Nash, David Richard, Pedersen, Jes Søe, Hansen, Mette Sif, Chriél, M. & Pagh, S., 2021, In: Genetics and Biodiversity Journal. 5, 2, p. 127-139 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Bending during seedling emergence: Mechanochemical insight

    Bai, B., 2021, In: Trends in Plant Science. 26, 9, p. 879-881 3 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  28. Published

    Root exposure to apple replant disease soil triggers local defense response and rhizoplane microbiome dysbiosis

    Balbín-Suárez, A., Jacquiod, S., Rohr, A. D., Liu, B., Flachowsky, H., Winkelmann, T., Beerhues, L., Nesme, Joseph, Sørensen, Søren Johannes, Vetterlein, D. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 4, 14 p., fiab031.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Monsters in the dark: systematics and biogeography of the stygobitic genus Godzillius (Crustacea: Remipedia) from the Lucayan Archipelago

    Ballou, L., Iliffe, T. M., Kakuk, B., Gonzalez, B. C., Osborn, K. J., Worsaae, Katrine, Meland, K., Broad, K., Bracken-Grissom, H. & Olesen, Jørgen, 2021, In: European Journal of Taxonomy. 751, p. 115-139 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil

    Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, Regin, Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Paracetamol use during pregnancy — a call for precautionary action

    Bauer, A. Z., Swan, S. H., Kriebel, D., Liew, Z., Taylor, H. S., Bornehag, C., Andrade, A. M., Olsen, J., Jensen, Rigmor Højland, Mitchell, R. T., Skakkebæk, Niels Erik, Jégou, B. & Kristensen, D. M., 2021, In: Nature Reviews Endocrinology. 17, p. 757–766 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  32. Published

    Danish wetlands remained poor with plant species 17-years after restoration

    Baumane, M., Zak, D. H., Riis, T., Kotowski, W., Hoffmann, C. C. & Baattrup-Pedersen, A., 2021, In: Science of the Total Environment. 798, 10 p., 149146.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Overproduction of Human Zip (SLC39) Zinc Transporters in Saccharomyces cerevisiae for Biophysical Characterization

    Becares, E. R., Pedersen, Per Amstrup, Gourdon, Pontus Emanuel & Gotfryd, K., 2021, In: Cells. 10, 2, 21 p., 213.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The heart arrhythmia-linked D130G calmodulin mutation causes premature inhibitory autophosphorylation of CaMKII

    Berchtold, Martin Werner, Munk, M., Kulej, K., Porth, I., Lorentzen, Lasse Gøbel, Panina, S., Zacharias, T., Larsen, M. R. & la Cour, J. M., 2021, In: Biochimica et Biophysica Acta - Molecular Cell Research. 1868, 12, 9 p., 119119.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Studying mutation rate evolution in primates - a need for systematic comparison of computational pipelines

    Bergeron, Lucie Adrienne, Besenbacher, S., Schierup, M. H. & KU, thw266, 2021, In: GigaScience. 10, 10, 4 p., giab072.

    Research output: Contribution to journal › Review › Research › peer-review

  36. Published

    The germline mutational process in rhesus macaque and its implications for phylogenetic dating

    Bergeron, Lucie Adrienne, Besenbacher, S., Bakker, J., Zheng, J., Li, P., Antunes Pacheco, George, Sinding, Mikkel Holger Strander, Kamilari, M., Gilbert, M Thomas P, Schierup, M. H. & KU, thw266, 2021, In: GigaScience. 10, 5, 14 p., giab029.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Pedigree-based estimation of germline mutation rates in vertebrates and the evolutionary implication

    Bergeron, Lucie Adrienne, 2021, Department of Biology, Faculty of Science, University of Copenhagen. 341 p.

    Research output: Book/Report › Ph.D. thesis › Research

  38. Published

    Optimizing fish growth and animal welfare in aquaculture sea cages by profiling oxygen and water current

    Bergsson, H., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 124 p.

    Research output: Book/Report › Ph.D. thesis › Research

  39. Published

    DisCoTune: versatile auxiliary plasmids for the production of disulphide-containing proteins and peptides in the E. coli T7 system

    Bertelsen, A. B., Hackney, Celeste Menuet, Bayer, C. N., Kjelgaard, L. D., Rennig, M., Christensen, B., Sørensen, E. S., Safavi, Helena, Wulff, T., Ellgaard, Lars & Nørholm, M. H. H., 2021, In: Microbial Biotechnology. 14, 6, p. 2566-2580 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Importance of microbial communities at the root-soil interface for extracellular polymeric substances and soil aggregation in semiarid grasslands

    Bettermann, A., Zethof, J. H. T., Babin, D., Cammeraat, E. L. H., Solé-Benet, A., Lázaro, R., Luna, L., Nesme, Joseph, Sørensen, Søren Johannes, Kalbitz, K., Smalla, K. & Vogel, C., 2021, In: Soil Biology & Biochemistry. 159, 14 p., 108301.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Ancestral developmental potentials in early bony fish contributed to vertebrate water-to-land transition

    Bi, X. & KU, thw266, 2021, In: Zoological research. 42, 2, p. 135-137 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes

    Bi, X., Wang, K., Yang, L., Pan, H., Jiang, H., Wei, Q., Fang, M., Yu, H., Zhu, C., Cai, Y., He, Y., Gan, X., Zeng, H., Yu, D., Zhu, Y., Jiang, H., Qiu, Q., Yang, H., Zhang, Y. E., Wang, W. & 3 others, Zhu, M., He, S. & KU, thw266, 2021, In: Cell. 184, 5, p. 1377-1391, e1-e14

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Binding Sites for Oligosaccharide Repeats from Lactic Acid Bacteria Exopolysaccharides on Bovine β-Lactoglobulin Identified by NMR Spectroscopy

    Birch, J., Khan, S., Madsen, M., Kjeldsen, C., Møller, M. S., Stender, E. G. P., Peters, G. H. J., Duus, J. Ø., Kragelund, Birthe Brandt & Svensson, B., 2021, In: ACS Omega. 6, 13, p. 9039-9052 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Benchmarking plant diversity of Palaearctic grasslands and other open habitats

    Biurrun, I., Pielech, R., Dembicz, I., Gillet, F., Kozub, Ł., Marcenò, C., Reitalu, T., Van Meerbeek, K., Guarino, R., Chytrý, M., Pakeman, R. J., Preislerová, Z., Axmanová, I., Burrascano, S., Bartha, S., Boch, S., Bruun, H. H., Conradi, T., De Frenne, P., Essl, F. & 203 others, Filibeck, G., Hájek, M., Jiménez-Alfaro, B., Kuzemko, A., Molnár, Z., Pärtel, M., Pätsch, R., Prentice, H. C., Roleček, J., Sutcliffe, L. M. E., Terzi, M., Winkler, M., Wu, J., Aćić, S., Acosta, A. T. R., Afif, E., Akasaka, M., Alatalo, J. M., Aleffi, M., Aleksanyan, A., Ali, A., Apostolova, I., Ashouri, P., Bátori, Z., Baumann, E., Becker, T., Belonovskaya, E., Benito Alonso, J. L., Berastegi, A., Bergamini, A., Bhatta, K. P., Bonini, I., Büchler, M., Budzhak, V., Bueno, Á., Buldrini, F., Campos, J. A., Cancellieri, L., Carboni, M., Ceulemans, T., Chiarucci, A., Chocarro, C., Conti, L., Csergő, A. M., Cykowska-Marzencka, B., Czarniecka-Wiera, M., Czarnocka-Cieciura, M., Czortek, P., Danihelka, J., de Bello, F., Deák, B., Demeter, L., Deng, L., Diekmann, M., Dolezal, J., Dolnik, C., Dřevojan, P., Dupré, C., Ecker, K., Ejtehadi, H., Erschbamer, B., Etayo, J., Etzold, J., Farkas, T., Farzam, M., Fayvush, G., Calzado, M. R. F., Finckh, M., Fjellstad, W., Fotiadis, G., García-Magro, D., García-Mijangos, I., Gavilán, R. G., Germany, M., Ghafari, S., Giusso del Galdo, G. P., Grytnes, J., Güler, B., Gutiérrez-Girón, A., Helm, A., Herrera, M., Hüllbusch, E. M., Ingerpuu, N., Jägerbrand, A. K., Jandt, U., Janišová, M., Jeanneret, P., Jeltsch, F., Jensen, K., Jentsch, A., Kącki, Z., Kakinuma, K., Kapfer, J., Kargar, M., Kelemen, A., Kiehl, K., Kirschner, P., Koyama, A., Langer, N., Lazzaro, L., Lepš, J., Li, C., Li, F. Y., Liendo, D., Lindborg, R., Löbel, S., Lomba, A., Lososová, Z., Lustyk, P., Luzuriaga, A. L., Ma, W., Maccherini, S., Magnes, M., Malicki, M., Manthey, M., Mardari, C., May, F., Mayrhofer, H., Meier, E. S., Memariani, F., Merunková, K., Michelsen, O., Molero Mesa, J., Moradi, H., Moysiyenko, I., Mugnai, M., Naqinezhad, A., Natcheva, R., Ninot, J. M., Nobis, M., Noroozi, J., Nowak, A., Onipchenko, V., Palpurina, S., Pauli, H., Pedashenko, H., Pedersen, C., Peet, R. K., Pérez-Haase, A., Peters, J., Pipenbaher, N., Pirini, C., Pladevall-Izard, E., Plesková, Z., Potenza, G., Rahmanian, S., Rodríguez-Rojo, M. P., Ronkin, V., Rosati, L., Ruprecht, E., Rusina, S., Sabovljević, M., Sanaei, A., Sánchez, A. M., Santi, F., Savchenko, G., Sebastià, M. T., Shyriaieva, D., Silva, V., Škornik, S., Šmerdová, E., Sonkoly, J., Sperandii, M. G., Staniaszek-Kik, M., Stevens, C., Stifter, S., Suchrow, S., Swacha, G., Świerszcz, S., Talebi, A., Teleki, B., Tichý, L., Tölgyesi, C., Torca, M., Török, P., Tsarevskaya, N., Tsiripidis, I., Turisová, I., Ushimaru, A., Valkó, O., Van Mechelen, C., Vanneste, T., Vasheniak, I., Vassilev, K., Viciani, D., Villar, L., Virtanen, R., Vitasović-Kosić, I., Vojtkó, A., Vynokurov, D., Waldén, E., Wang, Y., Weiser, F., Wen, L., Wesche, K., White, H., Widmer, S., Wolfrum, S., Wróbel, A., Yuan, Z., Zelený, D., Zhao, L. & Dengler, J., 2021, In: Journal of Vegetation Science. 32, 4, 21 p., e13050.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Cardiovascular autonomic neuropathy and the impact on progression of diabetic kidney disease in type 1 diabetes

    Bjerre-Christensen, T., Winther, S. A., Tofte, N., Theilade, S., Ahluwalia, Tarun Veer Singh, Lajer, M., Hansen, T. W., Rossing, Peter & Hansen, C. S., 2021, In: B M J Open Diabetes Research & Care. 9, 1, 9 p., e002289.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The endangered White Sands pupfish (Cyprinodon tularosa) genome reveals low diversity and heterogenous patterns of differentiation

    Black, A. N., Willoughby, J. R., Brüniche-Olsen, Anna, Pierce, B. L. & DeWoody, J. A., 2021, In: Molecular Ecology Resources. 21, 7, p. 2520-2532 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The loss of mixotrophy in Alexandrium pseudogonyaulax: Implications for trade-offs between toxicity, mucus trap production, and phagotrophy

    Blossom, H. E. & Hansen, Per Juel, 2021, In: Limnology and Oceanography. 66, 2, p. 528-542 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Don’t drink it, bury it: comparing decomposition rates with the tea bag index is possible without prior leaching

    Blume-Werry, G., Di Maurizio, V., Beil, I., Lett, Signe, Schwieger, S. & Kreyling, J., 2021, In: Plant and Soil. 465, 1-2, p. 613-621 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Flexibility and resilience of great tit (Parus major) gut microbiomes to changing diets

    Bodawatta, Kasun Harshana, Freiberga, I., Puzejova, K., Sam, K., Poulsen, Michael & Jønsson, Knud Andreas, 2021, In: BMC Animal Microbiome. 3, 14 p., 20.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Species-specific but not phylosymbiotic gut microbiomes of New Guinean passerine birds are shaped by diet and flight-associated gut modifications

    Bodawatta, Kasun Harshana, Koane, B., Maiah, G., Sam, K., Poulsen, Michael & Jønsson, Knud Andreas, 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1949, 10 p., 20210446.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    The morphology and phylogeny of the diatom genera Rhizosolenia, Proboscia, Pseudosolenia and Neocalyptrella from Gulf of Thailand and the Andaman Sea, with description of Rhizosolenia loanicola sp. nov., Proboscia siamensis sp. nov. and Probosciales ord. nov.

    Boonprakob, A., Lundholm, Nina, Medlin, L. K. & Moestrup, Øjvind, 2021, In: Diatom Research. 36, 3, p. 143-184 42 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Using the 2020 global pandemic as a springboard to highlight the need for amphibian conservation in eastern Asia

    Borzée, A., Kielgast, J., Wren, S., Angulo, A., Chen, S., Magellan, K., Messenger, K. R., Hansen-Hendrikx, C. M., Baker, A., Santos, M. M. D., Kusrini, M., Jiang, J., Maslova, I. V., Das, I., Park, D., Bickford, D., Murphy, R. W., Che, J., Van Do, T., Nguyen, T. Q. & 2 others, Chuang, M. & Bishop, P. J., 2021, In: Biological Conservation. 255, 10 p., 108973.

    Research output: Contribution to journal › Review › Research › peer-review

  53. Published

    Caste-specific recognition patterns in a fungus-growing termite

    Bos, N. & van Zweden, J. S., 2021, In: Animal Behaviour. 182, p. 125-133 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Conformational Ensembles of Noncoding Elements in the SARS-CoV-2 Genome from Molecular Dynamics Simulations

    Bottaro, S., Bussi, G. & Lindorff-Larsen, Kresten, 2021, In: Journal of the American Chemical Society. 143, 22, p. 8333-8343

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals

    Bozzi, D., Rasmussen, Jacob Agerbo, Carøe, C., Sveier, H., Nordøy, K., Gilbert, M Thomas P & Limborg, Morten Tønsberg, 2021, In: BMC Animal Microbiome. 3, 1, 17 p., 30.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Parathyroid hormone receptor stimulation induces human adipocyte lipolysis and browning

    Breining, P., Pedersen, S. B., Kjolby, M., Hansen, Jacob B., Jessen, N. & Richelsen, B., 2021, In: European Journal of Endocrinology. 184, 5, p. 687-697 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Museskridt eller tigerspring?

    Bruun, Hans Henrik, 2021, In: moMentum+. 19, 1, p. 28-31 4 p.

    Research output: Contribution to journal › Journal article › Communication

  58. Published

    What is unmanaged forest and how does it sustain biodiversity in landscapes with a long history of intensive forestry?

    Bruun, Hans Henrik & Heilmann-Clausen, Jacob, 2021, In: Journal of Applied Ecology. 58, 9, p. 1813-1816 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Life-history traits and habitat availability shape genomic diversity in birds: implications for conservation

    Brüniche-Olsen, Anna, Kellner, K. F., Belant, J. L. & DeWoody, J. A., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1961, 9 p., 21001441.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    αα-Hub domains and intrinsically disordered proteins: a decisive combo

    Bugge, K., Staby, L., Salladini, Edoardo, Falbe-Hansen, R. G., Kragelund, Birthe Brandt & Skriver, Karen, 2021, In: Journal of Biological Chemistry. 296, 18 p., 100226.

    Research output: Contribution to journal › Review › Research › peer-review

  61. Published

    Obscuroplaca gen. nov. – a replacement name for Phaeoplaca; Teloschistaceae (lichenized Ascomycota) from the Galapagos Islands

    Bungartz, F., Søchting, Ulrik & Arup, U., 2021, In: Plant and Fungal Systematics. 66, 2, p. 240-241 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  62. Published

    Novel ideas to further expand the applicability of rhythm analysis

    Burchardt, L. S., Briefer, Elodie & Knörnschild, M., 2021, In: Ecology and Evolution. 11, 24, p. 18229-18237 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    The treasure inside barley seeds: microbial diversity and plant beneficial bacteria

    Bziuk, N., Maccario, Lorrie, Straube, B., Wehner, G., Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2021, In: Environmental Microbiomes. 16, 21 p., 20.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Tillage shapes the soil and rhizosphere microbiome of barley - but not its susceptibility towards Blumeria graminis f. sp. hordei

    Bziuk, N., Maccario, Lorrie, Douchkov, D., Lueck, S., Babin, D., Sørensen, Søren Johannes, Schikora, A. & Smalla, K., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Understanding the Origins of Loss of Protein Function by Analyzing the Effects of Thousands of Variants on Activity and Abundance

    Cagiada, Matteo, Johansson, Kristoffer Enøe, Valanciute, A., Nielsen, S. V., Hartmann-Petersen, Rasmus, Yang, J. J., Fowler, D. M., Stein, Amelie & Lindorff-Larsen, Kresten, 2021, In: Molecular Biology and Evolution. 38, 8, p. 3235-3246

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Antisense inhibition of the Escherichia coli NrdAB aerobic ribonucleotide reductase is bactericidal due to induction of DNA strand breaks

    Campion, C., Charbon, Godefroid, Thomsen, T. T., Nielsen, Peter E. & Løbner-Olesen, Anders, 2021, In: Journal of Antimicrobial Chemotherapy. 76, 11, p. 2802–2814 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Photosynthesis from stolen chloroplasts can support sea slug reproductive fitness

    Cartaxana, P., Rey, F., LeKieffre, C., Lopes, D., Hubas, C., Spangenberg, J. E., Escrig, S., Jesus, B., Calado, G., Domingues, R., Kühl, Michael, Calado, R., Meibom, A. & Cruz, S., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1959, 9 p., 20211779.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Comparative Genomic Analyses of Flavobacterium psychrophilum Isolates Reveals New Putative Genetic Determinants of Virulence Traits

    Castillo, D., Donati, V. L., Jørgensen, J., Sundell, K., Dalsgaard, I., Madsen, L., Wiklund, T. & Middelboe, Mathias, 2021, In: Microorganisms. 9, 8, 15 p., 1658.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Genome-informed approach to identify genetic determinants of Flavobacterium psychrophilum phage susceptibility

    Castillo, D., Jørgensen, J., Sundell, K., Madsen, L., Dalsgaard, I., Wiklund, T. & Middelboe, Mathias, 2021, In: Environmental Microbiology. 23, 8, p. 4185-4199 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    The Tetragnatha kauaiensis Genome Sheds Light on the Origins of Genomic Novelty in Spiders

    Cerca, J., Armstrong, E. E., Vizueta Moraga, Joel, Fernández, R., Dimitrov, D., Petersen, Bent, Prost, S., Rozas, J., Petrov, D. & Gillespie, R. G., 2021, In: Genome Biology and Evolution. 13, 12, 17 p., evab262.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Reduced tillage, cover crops and organic amendments affect soil microbiota and improve soil health in Uruguayan vegetable farming systems

    Cerecetto, V., Smalla, K., Nesme, Joseph, Garaycochea, S., Fresia, P., Sørensen, Søren Johannes, Babin, D. & Leoni, C., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p., fiab023.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Quantifying nitrogen fixation by heterotrophic bacteria in sinking marine particles

    Chakraborty, S., Andersen, K. H., Visser, A. W., Inomura, K., Follows, M. J. & Riemann, Lasse, 2021, In: Nature Communications. 12, 14 p., 4085.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Five hundred million years to mobility: directed locomotion and its ecological function in a turtle barnacle

    Chan, B. K. K., Wong, Y. H., Robinson, N. J., Lin, J., Yu, S., Dreyer, N., Cheng, I., Høeg, Jens Thorvald & Zardus, J. D., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1960, 10 p., 20211620.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    The evolutionary diversity of barnacles, with an updated classification of fossil and living forms

    Chan, B. K. K., Dreyer, N., Gale, A. S., Glenner, Henrik, Ewers-Saucedo, C., Pérez-Losada, M., Kolbasov, G. A., Crandall, K. A. & Høeg, Jens Thorvald, 2021, In: Zoological Journal of the Linnean Society. 193, 3, p. 789-846 58 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Arresting chromosome replication upon energy starvation in Escherichia coli

    Charbon, Godefroid, Frimodt-Møller, Jakob & Løbner-Olesen, Anders, 2021, In: Current Genetics. 67, 6, p. 877-882 6 p.

    Research output: Contribution to journal › Review › Research › peer-review

  76. Published

    Energy Starvation Induces a Cell Cycle Arrest in Escherichia coli by Triggering Degradation of the DnaA Initiator Protein

    Charbon, Godefroid, Mendoza-Chamizo, B., Campion, C., Li, X., Jensen, P. R., Frimodt-Møller, Jakob & Løbner-Olesen, Anders, 2021, In: Frontiers in Molecular Biosciences. 8, 9 p., 629953.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Rad52 SUMOylation functions as a molecular switch that determines a balance between the Rad5- and Rad59-dependent survivors

    Charifi, F., Churikov, D., Eckert-Boulet, N., Minguet, C., Jourquin, F., Hardy, J., Lisby, Michael, Simon, M. N. & Géli, V., 2021, In: iScience. 24, 3, 26 p., 102231.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    (p)ppGpp-Dependent Regulation of the Nucleotide Hydrolase PpnN Confers Complement Resistance in Salmonella enterica Serovar Typhimurium

    Chau, N. Y. E., Pérez-Morales, D., Elhenawy, W., Bustamante, V. H., ZHANG, YONG & Coombes, B. K., 2021, In: Infection and Immunity. 89, 2, 14 p., e00639-20.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Cervicovaginal microbiome dynamics after taking oral probiotics

    Chen, Chen, Hao, L., Zhang, Z., Tian, L., Zhang, X., Zhu, J., Jie, Zhuye, Tong, X., Xiao, L., Zhang, T., Jin, X., Xu, X., Yang, H., Wang, J., Kristiansen, Karsten & Jia, H., 2021, In: Journal of Genetics and Genomics. 48, 8, p. 716-726 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Single cell atlas for 11 non-model mammals, reptiles and birds

    Chen, D., Sun, J., Zhu, J., Ding, X., Lan, T., Wang, X., Wu, W., Ou, Z., Zhu, L., Ding, P., Wang, H., Luo, L., Xiang, R., Wang, X., Qiu, J., Wang, S., Li, H., Chai, C., Liang, L., An, F. & 40 others, Zhang, L., Han, L., Zhu, Y., Wang, F., Yuan, Y., Wu, W., Sun, C., Lu, H., Wu, J., Sun, X., Zhang, S., Sahu, S. K., Liu, P., Xia, J., Zhang, L., Chen, H., Fang, D., Zeng, Y., Wu, Y., Cui, Z., He, Q., Jiang, S., Ma, X., Feng, W., Xu, Y., Li, F., Liu, Z., Chen, L., Chen, F., Jin, X., Qiu, W., Wang, T., Li, Y., Xing, X., Yang, H., Xu, Y., Hua, Y., Liu, Y., Liu, H. & Xu, X., 2021, In: Nature Communications. 12, 17 p., 7083.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    A chromosome-level genome assembly of rugged rose (Rosa rugosa) provides insights into its evolution, ecology, and floral characteristics

    Chen, F., Su, L., Hu, S., Xue, J., Liu, H., Liu, G., Jiang, Y., Du, J., Qiao, Y., Fan, Y., Liu, Huan, Yang, Q., Lu, W., Shao, Z., Zhang, J., Zhang, L., Chen, F. & Cheng, Z. (., 2021, In: Horticulture Research. 8, 13 p., 141.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Sequencing of methylase-accessible regions in integral circular extrachromosomal DNA reveals differences in chromatin structure

    Chen, W., Weng, Z., Xie, Z., Xie, Y., Zhang, C., Chen, Z., Ruan, F., Wang, J., Sun, Y., Fang, Y., Guo, M., Tong, Y., Li, Y. & Tang, C., 2021, In: Epigenetics & Chromatin. 14, 11 p., 40.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Population ecology, growth, and physico-chemical habitat of anadromous European perch Perca fluviatilis

    Christensen, E. A. F., Svendsen, M. B. S. & Steffensen, John Fleng, 2021, In: Estuarine, Coastal and Shelf Science. 249, 8 p., 107091.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Shuttle-box systems for studying preferred environmental ranges by aquatic animals

    Christensen, E. A. F., Andersen, L. E. J., Bergsson, H., Steffensen, John Fleng & Killen, S. S., 2021, In: Conservation Physiology. 9, 1, 21 p., coab028.

    Research output: Contribution to journal › Review › Research › peer-review

  85. Published

    CGRP-dependent signalling pathways involved in mouse models of GTN- cilostazol- and levcromakalim-induced migraine

    Christensen, S. L., Rasmussen, R. H., Ernstsen, C., La Cour, S., David, A., Chaker, J., Haanes, K. A., Christensen, Søren Tvorup, Olesen, Jes & Kristensen, D. M., 2021, In: Cephalalgia. 41, 14, p. 1413-1426 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Increased Likelihood of High Nitrous Oxide (N2O) Exchange in Soils at Reduced Microbial Diversity

    Christensen, Søren, Hol, W. H. G., Kurm, V. & Vestergård, M., 2021, In: Sustainability. 13, 4, 8 p., 1685.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Break-up of lake ice in the Arctic: strong linkage to mean summer temperature

    Christoffersen, Kirsten Seestern, Raundrup, K. & Lauridsen, T. L., 2021, Greenland Ecosystem Monitoring Annual Report Cards 2020. Christensen, T. R., Arndal, M. F. & Topp-Jørgensen, E. (eds.). Aarhus University, DCE - Danish Centre for Environment and Energy, p. 14-15

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  88. Published

    Indo-Danish network project 2019-2021: Arctic and alpine aquatic science – implication of climate change on proglacial freshwater ecosystem function and services. Report part I. Program and referendum for the Danish delegations visit to India 9th to 22nd October 2019

    Christoffersen, Kirsten Seestern & Perlt, Trine Warming, 2021, Department of Biology, Faculty of Science, University of Copenhagen. 25 p.

    Research output: Book/Report › Report › Research

  89. Published

    Indo-Danish network project 2019-2021: Arctic and alpine aquatic science – implication of climate change on proglacial freshwater ecosystem function and services. Report part II. Knowledge sharing: Book of abstracts and presentation from workshop at Bahugana Garhwal University 11th to 13th October 2019

    Christoffersen, Kirsten Seestern & Perlt, Trine Warming, 2021, Department of Biology, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/Report › Report › Research

  90. Published

    Metagenomics: A viable tool for reconstructing herbivore diet

    Chua, Physilia, Crampton-Platt, A., Lammers, Y., Alsos, I. G., Boessenkool, S. & Bohmann, Kristine, 2021, In: Molecular Ecology Resources. 21, 7, p. 2249-2263

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Towards the extended barcode concept: Generating DNA reference data through genome skimming of danish plants

    Chua, Physilia, Leerhøi, Frederik, Arfaoui, Emilia Marie Rolander, Margaryan, Ashot, Noer, Christina, Richter, S. R., Restrup, M. E., Bruun, Hans Henrik, Hartvig, Ida, Coissac, E., Boessenkool, S., Alsos, I. G. & Bohmann, Kristine, 2021, 38 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  92. Published

    Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet

    Chua, Physilia, Lammers, Y., Menoni, E., Ekrem, T., Bohmann, Kristine, Boessenkool, S. & Alsos, I. G., 2021, In: Environmental DNA. 3, 6, p. 1156-1171 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Evolutionary history of the extinct Sardinian dhole

    Ciucani, M. M., Jensen, J. K., Sinding, M. S., Smith, O., Lucenti, S. B., Rosengren, E., Rook, L., Tuveri, C., Arca, M., Cappellini, Enrico, Galaverni, M., Randi, E., Guo, C., KU, thw266, Sicheritz-Pontén, Thomas, Dalén, L., Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2021, In: Current Biology. 31, 24, p. 5571-5579.e6 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    A tipping point in carbon storage when forest expands into tundra is related to mycorrhizal recycling of nitrogen

    Clemmensen, K. E., Durling, M. B., Michelsen, Anders, Hallin, S., Finlay, R. D. & Lindahl, B. D., 2021, In: Ecology Letters. 24, 6, p. 1193-1204 12 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  95. Published

    Gill Transcriptomic Responses to Toxin-producing Alga Prymnesium parvum in Rainbow Trout

    Clinton, M., Krol, E., Sepúlveda, D., Andersen, N. R., Brierley, A. S., Ferrier, D. E. K., Hansen, Per Juel, Lorenzen, N. & Martin, S. A. M., 2021, In: Frontiers in Immunology. 12, 17 p., 794593.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Genome reduction and relaxed selection is associated with the transition to symbiosis in the basidiomycete genus Podaxis

    Conlon, B. H., Gostinčar, C., Fricke, J., Kreuzenbeck, N. B., Daniel, J., Schlosser, M. S. L., Peereboom, N., Aanen, D. K., de Beer, Z. W., Beemelmanns, C., Gunde-Cimerman, N. & Poulsen, Michael, 2021, In: iScience. 24, 6, 20 p., 102680.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Transcriptome Analysis Identifies GATA3-AS1 as a Long Noncoding RNA Associated with Resistance to Neoadjuvant Chemotherapy in Locally Advanced Breast Cancer Patients

    Contreras-Espinosa, L., Alcaraz, N., De La Rosa-Velázquez, I. A., Díaz-Chávez, J., Cabrera-Galeana, P., Rebollar-Vega, R., Reynoso-Noverón, N., Maldonado-Martínez, H. A., González-Barrios, R., Montiel-Manríquez, R., Bautista-Sánchez, D., Castro-Hernández, C., Alvarez-Gomez, R. M., Jiménez-Trejo, F., Tapia-Rodríguez, M., García-Gordillo, J. A., Pérez-Rosas, A., Bargallo-Rocha, E., Arriaga-Canon, C. & Herrera, L. A., 2021, In: Journal of Molecular Diagnostics. 23, 10, p. 1306-1323 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Postnatal development in a marsupial model, the fat-tailed dunnart (Sminthopsis crassicaudata; Dasyuromorphia: Dasyuridae)

    Cook, L. E., Newton, A. H., Hipsley, Christy Anna & Pask, A. J., 2021, In: Communications Biology . 4, 14 p., 1028.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    The multidimensional nutritional niche of fungus-cultivar provisioning in free-ranging colonies of a neotropical leafcutter ant

    Crumière, A. J. J., James, A., Lannes, P., Mallett, S., Michelsen, Anders, Rinnan, Riikka & Shik, Jonathan Z., 2021, In: Ecology Letters. 24, 11, p. 2439-2451 13 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  100. Published

    Bacteria Respond Stronger Than Fungi Across a Steep Wood Ash-Driven pH Gradient

    Cruz-Paredes, C., Bang-Andreasen, T., Christensen, Søren, Ekelund, Flemming, Frøslev, Tobias Guldberg, Jacobsen, C. S., Johansen, Jesper Liengaard, Mortensen, Louise Hindborg, Rønn, Regin, Vestergård, M. & Kjøller, Rasmus, 2021, In: Frontiers in Forests and Global Change. 4, 10 p., 781844.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    Resistance and Vulnerability of Honeybee (Apis mellifera) Gut Bacteria to Commonly Used Pesticides

    Cuesta Mate, Ana, Renelies-Hamilton, J., Kryger, P., Jensen, Annette Bruun, Sinotte, Veronica Marie & Poulsen, Michael, 2021, In: Frontiers in Microbiology. 12, 16 p., 717990.

    Research output: Contribution to journal › Journal article › Research › peer-review

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