Department of Biology

 

 
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  1. 2023
  2. Published

    Baldinia droopii sp. nov. (Suessiales, Dinophyceae), a new species from a small rainwater rock pool near Tvarminne, south-western Finland

    Hansen, Gert, Daugbjerg, Niels & Moestrup, Øjvind, 2023, In: Phycologia. 62, 1, 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Inherent lack of CMFDA/FDA staining in certain algae and its implication for ballast water testing

    Hansen, Gert, Petersen, G., Maguet, R., Sim, E. & Madsen, T., 2023, In: Marine Pollution Bulletin. 194, Part B, 9 p., 115312.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Between inflammation, homeostasis and adaptation: Systemic and tissue-specific responses to maternal immune activation

    Hansen, Signe Schmidt Kjølner, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 177 p.

    Research output: Book/Report › Ph.D. thesis › Research

  5. Published

    Mycena species can be opportunist-generalist plant root invaders

    Harder, Christoffer Bugge, Hesling, E., Botnen, S. S., Lorberau, K. E., Dima, B., von Bonsdorff-Salminen, T., Niskanen, T., Jarvis, S. G., Ouimette, A., Hester, A., Hobbie, E. A., Taylor, A. F. S. & Kauserud, H., 2023, In: Environmental Microbiology. 25, 10, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    2023 BMC Ecology and Evolution image competition: the winning images

    Harman, J., Hipsley, Christy Anna, Jacobus, L. M., Liberles, D. A., Settele, J. & Traulsen, A., 2023, In: BMC Ecology and Evolution. 23, 1, 7 p., 32.

    Research output: Contribution to journal › Editorial › Research

  7. Published

    A corazonin G protein-coupled receptor gene in the tick Ixodes scapularis yields two splice variants, each coding for a specific corazonin receptor

    Hauser, Frank, Pallesen, M., Lehnhoff, J., Li, S., Lind, A. & Grimmelikhuijzen, Cornelis (Cok), 2023, In: Biochemical and Biophysical Research Communications. 666, p. 162-169 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Cloning and deorphanization of three inotocin (insect oxytocin/vasopressin-like) receptors and their ligand from the tick Ixodes scapularis

    Hauser, Frank, Al-Ribaty, T., Stebegg, M., Thygesen, G. & Grimmelikhuijzen, Cornelis (Cok), 2023, In: Biochemical and Biophysical Research Communications. 680, p. 34-41 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Plasmids metagenomic: insight into their cryptic ecology

    He, Wanli, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 139 p.

    Research output: Book/Report › Ph.D. thesis › Research

  10. Published

    Quantitative Evaluation of Stem-like Markers of Human Glioblastoma Using Single-Cell RNA Sequencing Datasets

    He, Yue, Døssing, Kristina Benedikte V, Sloth, Ane Beth, He, Xuening, Rossing, M. & Kjær, Andreas, 2023, In: Cancers. 15, 5, 16 p., 1557.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Litter chemistry of common European tree species drives the feeding preference and consumption rate of soil invertebrates, and shapes the diversity and structure of gut and faecal microbiomes

    Heděnec, P., Zheng, H., Siqueira, D. P., Peng, Y., Schmidt, Inger Kappel, Frøslev, Tobias Guldberg, Kjøller, Rasmus, Li, H., Frouz, J. & Vesterdal, Lars, 2023, In: Soil Biology and Biochemistry. 177, 13 p., 108918.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Tree species traits and mycorrhizal association shape soil microbial communities via litter quality and species mediated soil properties

    Heděnec, P., Zheng, H., Siqueira, D. P., Lin, Q., Peng, Y., Schmidt, Inger Kappel, Frøslev, Tobias Guldberg, Kjøller, Rasmus, Rousk, J. & Vesterdal, Lars, 2023, In: Forest Ecology and Management. 527, 15 p., 120608.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Exploring regulation of untranslated RNAs in Escherichia coli: From the well-defined tRNAs to the evolving field of sRNAs

    Heidemann, Ditte Fogh, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 154 p.

    Research output: Book/Report › Ph.D. thesis › Research

  14. Published

    Pharmacokinetics of Locally Applied Antibiotic Prophylaxis for Implant-Based Breast Reconstruction

    Hemmingsen, Mathilde Nejrup, Bennedsen, A. K., Kullab, R. B., Norlin, C. B., Ørholt, M., Larsen, A., Bue, M., Lichtenberg, Mads, Hertz, Frederik Boëtius, Damsgaard, T. E., Vester-Glowinski, Peter Viktor, Sørensen, Søren Johannes, Bjarnsholt, Thomas & Herly, Mikkel, 2023, In: JAMA network open. 6, 12, 11 p., E2348414.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    An insulin hypersecretion phenotype precedes pancreatic β cell failure in MODY3 patient-specific cells

    Hermann, F. M., Kjærgaard, M. F., Tian, C., Tiemann, Ulf, Jackson, Abigail Laura, Olsen, L. R., Kraft, M., Carlsson, P. O., Elfving, I. M., Kettunen, J. L. T., Tuomi, T., Novak, Ivana & Semb, Tor Henrik, 2023, In: Cell Stem Cell. 30, 1, p. 38-51.e8 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole-genome sequencing

    Hernández-Alonso, G., Ramos-Madrigal, J., Sun, X., Scharff-Olsen, C. H., Sinding, M. H. S., Martins, N. F., Ciucani, M. M., Mak, S. S. T., Lanigan, L. T., Clausen, C. G., Bhak, J., Jeon, S., Kim, C., Eo, K. Y., Cho, S. H., Boldgiv, B., Gantulga, G., Unudbayasgalan, Z., Kosintsev, P. A., Stenøien, H. K. & 2 others, Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2023, In: Ecology and Evolution. 13, 8, 15 p., e10404.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Redefining the Evolutionary History of the Rock Dove, Columba livia, Using Whole Genome Sequences

    Hernández Alonso, Germán, Ramos Madrigal, Jazmin, van Grouw, H., Ciucani, Marta Maria, Cavill, Emily Louisa, Sinding, Mikkel Holger Strander, Gopalakrishnan, Shyam, Antunes Pacheco, George & Gilbert, M Thomas P, 2023, In: Molecular Biology and Evolution. 40, 11, 17 p., msad243.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Expanding the Echinoderes coulli group (Kinorhyncha Cyclorhagida) with a new species from the Chuuk Islands, Micronesia

    Herranz, Maria, Moreleon, A. D., Rho, H. S. & Sørensen, Martin Vinther, 2023, In: Zoologischer Anzeiger. 302, p. 67-74 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    A meta-analysis of plant tissue O2 dynamics

    Herzog, Max, Pellegrini, Elisa & Pedersen, Ole, 2023, In: Functional Plant Biology. 50, 7, 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  20. Published

    Enhancing Flood Tolerance in Wheat (Triticum aestivum) and Rice (Oryza sativa): Identifying Key Physiological Traits

    Herzog, Max, Tong, Shuai, Kjær, Johan Emil, Konnerup, D., Peralta Ogorek, Lucas León, Song, Zhiwei, Pellegrini, Elisa & Pedersen, Ole, 2023. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  21. Published

    FK506-Binding Protein 2 Participates in Proinsulin Folding

    Hoefner, C., Bryde, T. H., Pihl, C., Tiedemann, S. N., Bresson, S. E., Hotiana, H. A., Khilji, M. S., Santos, T. D., Puglia, M., Pisano, P., Majewska, M., Durzynska, J., Klindt, K., Klusek, J., Perone, M. J., Bucki, R., Hägglund, P. M., Gourdon, P. E., Gotfryd, K., Urbaniak, E. & 5 others, Borowiak, M., Wierer, M., MacDonald, P. E., Mandrup-Poulsen, Thomas & Marzec, Michal Tomasz, 2023, In: Biomolecules. 13, 1, 20 p., 152.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    A review of open top chamber (OTC) performance across the ITEX Network

    Hollister, R. D., Elphinstone, C., Henry, G. H. R., Bjorkman, A. D., Klanderud, K., Bjoerk, R. G., Bjoerkman, M. P., Bokhorst, S., Carbognani, M., Cooper, E. J., Dorrepaal, E., Elmendorf, S. C., Fetcher, N., Gallois, E. C., Guomundsson, J., Healey, N. C., Jonsdottir, I. S., Klarenberg, I. J., Oberbauer, S. F., Macek, P. & 7 others, May, J. L., Mereghetti, A., Molau, U., Petraglia, A., Rinnan, Riikka, Rixen, C. & Wookey, P. A., 2023, In: Arctic Science. 9, 2, 14 p.

    Research output: Contribution to journal › Review › Research › peer-review

  23. Published

    Bowhead NEIL1: molecular cloning, characterization, and enzymatic properties

    Holm, S., Larsen, R. M., Holst, C. M., Heide-Jørgensen, M. P., Steffensen, John Fleng, Stevnsner, T. & Larsen, K., 2023, In: Biochimie. 206, p. 136-149 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Did circular DNA shape the evolution of mammalian genomes?

    Holt, Sylvester, Arrey Tané, Gerard & Regenberg, Birgitte, 2023, In: Trends in Biochemical Sciences. 48, 4, 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Towards in silico CLIP-seq: predicting protein-RNA interaction via sequence-to-signal learning

    Horlacher, M., Wagner, N., Moyon, L., Kuret, K., Goedert, N., Salvatore, Marco, Ule, J., Gagneur, J., Winther, Ole & Marsico, A., 2023, In: Genome Biology. 24, 1, 37 p., 180.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Intermittent fasting modulates the intestinal microbiota and improves obesity and host energy metabolism

    Hu, X., Xia, K., Dai, M., Han, X., Yuan, P., Liu, J., Liu, S., Jia, F., Chen, J., Jiang, F., Yu, J., Yang, H., Wang, J., Xu, X., Jin, X., Kristiansen, Karsten, Xiao, L., Chen, W., Han, Mo & Duan, S., 2023, In: npj Biofilms and Microbiomes. 9, 1, 9 p., 19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Bacillus velezensis SQR9 inhibition to fungal denitrification responsible for decreased N2O emissions from acidic soils

    Huang, Mengyuan, Zhang, Y., Wu, J., Wang, Y., Xie, Y., Geng, Y., Zhang, N., Michelsen, Anders, Li, S., Zhang, R., Shen, Q. & Zou, J., 2023, In: Science of the Total Environment. 885, 10 p., 163789.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    New insights into osmobiosis and chemobiosis in tardigrades

    Hvidepil, L. K. B. & Møbjerg, Nadja, 2023, In: Frontiers in Physiology. 14, 9 p., 1274522.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Ketone body infusion abrogates growth hormone-induced lipolysis and insulin resistance

    Høgild, M. L., Hjelholt, A. J., Hansen, J., Pedersen, Steen, Møller, N., Wojtaszewski, Jørgen F P, Johannsen, M., Jessen, N. & Lunde Jørgensen, J. O., 2023, In: Journal of Clinical Endocrinology and Metabolism. 108, 3, p. 653-664 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Interactions between microenvironmental acidity and PDAC driver mutations studied in 3D organotypic culture

    Ialchina, Renata, 2023, Department of Biology, Faculty of Science, University of Copenhagen. 261 p.

    Research output: Book/Report › Ph.D. thesis › Research

  31. Published

    Phage-Inducible Chromosomal Islands as a Diagnostic Platform to Capture and Detect Bacterial Pathogens

    Ibarra Chavez, Rodrigo, Reboud, J., Penadés, J. R. & Cooper, J. M., 2023, In: Advanced Science. 10, 24, 11 p., 2301643.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Administration of vitamin E and C enhances immunological and biochemical responses against toxicity of silver nanoparticles in grass carp (Ctenopharyngodon idella)

    Iqbal, K. J., Majeed, H., Iqbal, K. J., Asghar, M., Azmat, H., Fatima, M., Khan, N., Baboo, I., Tehseen, A., Ali, W., Saeed, Usama, Khizar, A., Fatima, A., Nisa, S. & Davies, S. J., 2023, In: PLoS ONE. 18, 4, 21 p., e0284285.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Determination of heavy metals (Pb, Cr, As, Hg, and Cd) into the body organs of selected fish, water, sediment, and soil samples from Head Punjnad and Head Taunsa, Punjab, Pakistan

    Iqbal, K. J., Khan, N., Fatima, M., Lashari, M. H., Asad, M., Ashraf, A., Fatima, H., Majeed, H., Baboo, I., Iqbal, K. J., Asghar, M., Saeed, Usama, Ali, W., Nazir, S., Bano, S. & Tanveer, A., 2023, In: PLoS ONE. 18, 9, 10 p., e0288163.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Phosphorylation of Schizosaccharomyces pombe Dss1 mediates direct binding to the ubiquitin-ligase Dma1 in vitro

    Jacobsen, Nina Louise, Bloch, Magnus Borup, Millard, P. S., Ruidiaz, Sarah Frederiksen, Elsborg, Jonas Damgaard, Boomsma, Wouter, Hendus-Altenburger, R., Hartmann-Petersen, Rasmus & Kragelund, Birthe Brandt, 2023, In: Protein Science. 32, 9, 16 p., e4733.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Genotypic variations and interspecific interactions modify gene expression and biofilm formation of Xanthomonas retroflexus

    Jacquiod, S., Olsen, N. M. C., Blouin, M., Røder, Henriette Lyng & Burmølle, Mette, 2023, In: Environmental Microbiology. 25, 12, 3225-3238.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    DermX: An end-to-end framework for explainable automated dermatological diagnosis

    Jalaboi, R., Faye, F., Orbes-Arteaga, M., Jørgensen, D., Winther, Ole & Galimzianova, A., 2023, In: Medical Image Analysis. 83, 12 p., 102647.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Explainable Image Quality Assessments in Teledermatological Photography

    Jalaboi, R., Winther, Ole & Galimzianova, A., 2023, In: Telemedicine and e-Health. 29, 9, p. 1342-1348 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Limited historical admixture between European wildcats and domestic cats

    Jamieson, A., Carmagnini, A., Howard-McCombe, J., Doherty, S., Hirons, A., Dimopoulos, E., Lin, A. T., Allen, R., Anderson-Whymark, H., Barnett, R., Batey, C., Beglane, F., Bowden, W., Bratten, J., De Cupere, B., Drew, E., Foley, N. M., Fowler, T., Fox, A., Geigl, E-M. & 35 others, Gotfredsen, Anne Birgitte, Grange, T., Griffiths, D., Groß, D., Haruda, A., Hjermind, J., Knapp, Z., Lebrasseur, O., Librado, P., Lyons, L. A., Mainland, I., McDonnell, C., Muñoz-Fuentes, V., Nowak, C., O'Connor, T., Peters, J., Russo, I. M., Ryan, H., Sheridan, A., Sinding, Mikkel Holger Strander, Skoglund, P., Swali, P., Symmons, R., Thomas, G., Jensen, Theis Zetner Trolle, Kitchener, A. C., Senn, H., Lawson, D., Driscoll, C., Murphy, W. J., Beaumont, M., Ottoni, C., Sykes, N., Larson, G. & Frantz, L., 2023, In: Current Biology. 33, 21, p. 4751-4760.e14

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Understory functional groups and fire history but not experimental warming drive tree seedling performance in unmanaged boreal forests

    Jessen, M. T., Krab, E. J., Lett, Signe, Nilsson, M., Teuber, L., Wardle, D. A. & Dorrepaal, E., 2023, In: Frontiers in Forests and Global Change. 6, 10 p., 1130532.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Microscale imaging sheds light on species-specific strategies for photo-regulation and photo-acclimation of microphytobenthic diatoms

    Jesus, B., Jauffrais, T., Trampe, Erik, Méléder, V., Ribeiro, L., Bernhard, J. M., Geslin, E. & Kühl, Michael, 2023, In: Environmental Microbiology. 25, 12, p. 3087-3103 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Genome-wide characterization of extrachromosomal circular DNA in gastric cancer and its potential role in carcinogenesis and cancer progression

    Jiang, X., Pan, Xiaoguang, Li, W., Han, Peng, Yu, J., Li, J., Zhang, H., Lv, W., Zhang, Y., He, Y. & Xiang, X., 2023, In: Cellular and Molecular Life Sciences. 80, 7, 18 p., 191.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Soil uptake of VOCs exceeds production when VOCs are readily available

    Jiao, Yi, Kramshøj, M., Davie-Martin, Cleo Lisa, Albers, C. N. & Rinnan, Riikka, 2023, In: Soil Biology and Biochemistry. 185, 12 p., 109153.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Volatile organic compound release across a permafrost-affected peatland

    Jiao, Yi, Davie-Martin, Cleo Lisa, Kramshøj, M., Christiansen, C. T., Lee, H., Althuizen, I. H. J. & Rinnan, Riikka, 2023, In: Geoderma. 430, 10 p., 116355.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    A consortium of three-bacteria isolated from human feces inhibits formation of atherosclerotic deposits and lowers lipid levels in a mouse model

    Jie, Z., Zhu, Q., Zou, Y., Wu, Q., Qin, M., He, D., Lin, X., Tong, X., Zhang, J., Jie, Z., Luo, W., Xiao, X., Chen, S., Wu, Y., Guo, G., Zheng, S., Li, Y., Lai, W., Yang, H., Wang, J. & 6 others, Xiao, L., Chen, J., Zhang, T., Kristiansen, Karsten, Jia, H. & Zhong, S., 2023, In: iScience. 26, 6, 22 p., 106960.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Mitigation of Greenhouse Gas Emissions from Rice via Manipulation of Key Root Traits

    Jimenez Serna, Juan de la Cruz & Pedersen, Ole, 2023, In: Rice. 16, 1, 10 p., 24.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Bacillus thuringiensis toxins divert progenitor cells toward enteroendocrine fate by decreasing cell adhesion with intestinal stem cells in Drosophila

    Jneid, Rouba, Loudhaief, Rihab, Zucchini-Pascal, N., Nawrot-Esposito, M. P., Fichant, A., Rousset, R., Bonis, M., Osman, D. & Gallet, A., 2023, In: eLife. 12, 34 p., e80179.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Centenarians have a diverse gut virome with the potential to modulate metabolism and promote healthy lifespan

    Johansen, Joachim, Atarashi, K., Arai, Y., Hirose, N., Sørensen, Søren Johannes, Vatanen, T., Knip, M., Honda, K., Xavier, R. J., Rasmussen, Simon & Plichta, D. R., 2023, In: Nature Microbiology. 8, p. 1064-1078 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    The GPCR adaptor protein Norbin regulates S1PR1 trafficking and the morphology, cell cycle and survival of PC12 cells

    Johansen, Valdemar Brimnes Ingemann, Hampson, E., Tsonou, E., Pantarelli, C., Chu, J. Y., Crossland, L., Okkenhaug, H., Massey, A. J., Hornigold, D. C., Welch, H. C. E. & Chetwynd, S. A., 2023, In: Scientific Reports. 13, 1, 13 p., 18237.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    A Gluten-Free Diet during Pregnancy and Early Life Increases Short Chain Fatty Acid-Producing Bacteria and Regulatory T Cells in Prediabetic NOD Mice

    Johansen, Valdemar Brimnes Ingemann, Færø, D., Buschard, K., Kristiansen, Karsten, Pociot, Flemming, Kiilerich, P., Josefsen, K., Haupt-jorgensen, M. & Antvorskov, J. C., 2023, In: Cells. 12, 12, 15 p., 1567.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Sarcopenia in chronic obstructive pulmonary disease: skeletal muscle gasping for air?

    Johansen, Valdemar Brimnes Ingemann, 2023, In: Journal of Physiology. 601, 5, p. 883-885

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  51. Published

    The Impact of Dietary Factors during Pregnancy on the Development of Islet Autoimmunity and Type 1 Diabetes: A Systematic Literature Review

    Johansen, Valdemar Brimnes Ingemann, Josefsen, K. & Antvorskov, J. C., 2023, In: Nutrients. 15, 20, 24 p., 4333.

    Research output: Contribution to journal › Review › Research › peer-review

  52. Published

    Global analysis of multi-mutants to improve protein function

    Johansson, Kristoffer Enøe, Lindorff-Larsen, Kresten & Winther, Jakob R., 2023, In: Journal of Molecular Biology. 435, 8, 15 p., 168034.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Prediction of Quality-control Degradation Signals in Yeast Proteins

    Johansson, Kristoffer Enøe, Mashahreh, B., Hartmann-Petersen, Rasmus, Ravid, T. & Lindorff-Larsen, Kresten, 2023, In: Journal of Molecular Biology. 435, 2, 9 p., 167915.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Transient accumulation and bidirectional movement of KIF13B in primary cilia

    Juhl, A. D., Anvarian, Zeinab, Kuhns, S., Berges, J., Andersen, J. S., Wüstner, D. & Pedersen, Lotte Bang, 2023, In: Journal of Cell Science. 136, 5, 8 p., jcs259257.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Association of SLC12A1 and GLUR4 Ion Transporters with Neoadjuvant Chemoresistance in Luminal Locally Advanced Breast Cancer

    Justo-Garrido, M., López-Saavedra, A., Alcaraz, N., Cortés-González, C. C., Oñate-Ocaña, L. F., Caro-Sánchez, C. H. S., Castro-Hernández, C., Arriaga-Canon, C., Díaz-Chávez, J. & Herrera, L. A., 2023, In: International Journal of Molecular Sciences. 24, 22, 16 p., 16104.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Intraspecific trait variability is a key feature underlying high Arctic plant community resistance to climate warming

    Jónsdóttir, I. S., Halbritter, A. H., Christiansen, C. T., Althuizen, I. H. J., Haugum, S. V., Henn, J. J., Björnsdóttir, K., Maitner, B. S., Malhi, Y., Michaletz, S. T., Roos, R. E., Klanderud, K., Lee, H., Enquist, B. J. & Vandvik, V., 2023, In: Ecological Monographs. 93, 1, 21 p., e1555.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Staying below the Radar: Unraveling a New Family of Ubiquitous “Cryptic” Non-Tailed Temperate Vibriophages and Implications for Their Bacterial Hosts

    Kalatzis, P. G., Mauritzen, Jesper Juel, Winther-Have, Caroline Sophie W, Michniewski, S., Millard, A., Tsertou, M. I., Katharios, P. & Middelboe, Mathias, 2023, In: International Journal of Molecular Sciences. 24, 4, 23 p., 3937.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Lysine deserts prevent adventitious ubiquitylation of ubiquitin-proteasome components

    Kampmeyer, Caroline, Grønbæk-Thygesen, Martin, Oelerich, N., Tatham, M. H., Cagiada, Matteo, Lindorff-Larsen, K., Boomsma, Wouter, Hofmann, K. & Hartmann-Petersen, Rasmus, 2023, In: Cellular and Molecular Life Sciences. 80, 6, 18 p., 143.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    A genome and single-nucleus cerebral cortex transcriptome atlas of the short-finned pilot whale Globicephala macrorhynchus

    Kang, H., Liu, Qun, Seim, I., Zhang, W., Li, H., Gao, H., Lin, W., Lin, M., Zhang, P., Zhang, Y., Gao, H., Wang, Y., Qin, Yating, Liu, M., Dong, L., Yang, Z., Zhang, Y., Han, L., Fan, G. & Li, S., 2023, In: Molecular Ecology Resources. 23, 5, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Ultrastructure and molecular phylogeny of Phalansterium foulumis sp. nov. (Amoebozoa Variosea)

    Karpov, S. A., Smakova, L. A., Malavin, S. A., Ekelund, Flemming & Smirnov, A. V., 2023, In: Protistology. 17, 3, p. 129-141 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Congeneric temperate orchids recruit similar—yet differentially abundant—endophytic bacterial communities that are uncoupled from soil, but linked to host phenology and population size

    Kaur, J., Harder, Christoffer Bugge & Sharma, J., 2023, In: American Journal of Botany. 110, 5, 16 p., e16168.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Metaboloepigenetics in cancer, immunity and cardiovascular disease

    Keating, S. T. & El-Osta, A., 2023, In: Cardiovascular Research. 119, 2, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Antifouling potential of enzymes applied to reverse osmosis membranes

    Khani, M., Hansen, Mads Frederik, Knoechel, Susanne, Rasekh, B., Ghasemipanah, K., Zamir, S. M., Nosrati, M. & Burmølle, Mette, 2023, In: Biofilm. 5, 9 p., 100119.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Editorial: Signaling by primary cilia in development and disease

    Kim, S. E., Nechipurenko, I. & Christensen, Søren Tvorup, 2023, In: Frontiers in Cell and Developmental Biology. 11, 3 p., 1186367.

    Research output: Contribution to journal › Editorial › Research › peer-review

  65. Published

    TBC1D4-S711 controls skeletal muscle insulin sensitization after exercise and contraction

    Kjøbsted, Rasmus, Kristensen, Jonas Møller, Eskesen, N. O., Kido, K., Fjorder, Klara, Damgaard, D. F., Larsen, Jeppe Kjærgaard, Andersen, Nicoline Resen, Birk, Jesper Bratz, Gudiksen, Anders, Treebak, Jonas Thue, Schjerling, Peter, Pilegaard, Henriette & Wojtaszewski, Jørgen F P, 2023, In: Diabetes. 72, 7, p. 857-871 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Oxygen Depletion in Arctic Lakes: Circumpolar Trends, Biogeochemical Processes, and Implications of Climate Change

    Klanten, Y., Couture, R. M., Christoffersen, Kirsten Seestern, Vincent, W. F. & Antoniades, D., 2023, In: Global Biogeochemical Cycles. 37, 5, 20 p., e2022GB007616.

    Research output: Contribution to journal › Review › Research › peer-review

  67. Published

    Linkages between seagrass tissue O2 dynamics and ecosystem oxidation and feedbacks are revealed using microsensors in situ

    Koch, M., Johnson, C., MacLeod, K., Travis, L., Madden, C. & Pedersen, Ole, 2023, p. 221. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

  68. Published

    Confusion will be my epitaph: genome-scale discordance stifles phylogenetic resolution of Holothuroidea

    Koch, N. M., Tilic, E., Miller, A. K., Stiller, Josefin & Rouse, G. W., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2002, 11 p., 20230988.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Genetics as a novel tool in mining impact assessment and biomonitoring of critically endangered western chimpanzees in the Nimba Mountains, Guinea

    Koops, K., Humle, T., Frandsen, P., Fitzgerald, M., D'Auvergne, L., Jackson, H. A., Børsting, Claus, Siegismund, Hans Redlef, Soumah, A. G. & Hvilsom, C., 2023, In: Conservation Science and Practice. 5, 4, 17 p., e12898.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Close coupling of plant functional types with soil microbial community composition drives soil carbon and nutrient cycling in tundra heath

    Koranda, M., Rinnan, Riikka & Michelsen, Anders, 2023, In: Plant and Soil. 488, p. 551-572 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Monomeric α-synuclein activates the plasma membrane calcium pump

    Kowalski, A., Betzer, C., Larsen, S. T., Gregersen, E., Newcombe, Estella Anne, Bermejo, M. C., Bendtsen, V. W., Diemer, J., Ernstsen, C. V., Jain, S., Bou, A. E., Langkilde, Annette Eva, Nejsum, L. N., Klipp, E., Edwards, R., Kragelund, Birthe Brandt, Jensen, P. H. & Nissen, Poul, 2023, In: EMBO Journal. 42, 23, 21 p., e111122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Managing fuels and fluids: Network integration of osmoregulatory and metabolic hormonal circuits in the polymodal control of homeostasis in insects

    Koyama, Takashi, Rana, Danial Wasim & Halberg, Kenneth Veland, 2023, In: BioEssays. 45, 9, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Realizing integration in structural biology: The 2022 ISBUC Annual Meeting

    Kragelund, Birthe Brandt, Loland, Claus Juul, Montoya, Guillermo, Hatzakis, Nikos, Martinez, Karen Laurence, Gajhede, Michael, Christensen, Caspar Elo & Holt, Lucy, 2023, In: Structure. 31, 7, p. 747-754

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Response to: "Correspondence on "Safety and efficacy of faecal microbiota transplantation for active peripheral psoriatic arthritis: An exploratory randomised placebo-controlled trial'' by McGonagle et al

    Kragsnaes, M. S., Kjeldsen, J., Horn, H. C., Munk, H. L., Pedersen, J. K., Just, S. A., Ahlquist, P., Davidsen, J. R., Nilsson, A. C., Röttger, R., Kruhøffer, M., Marchesi, J. R., Kristiansen, Karsten, Christensen, R. & Ellingsen, T., 2023, In: Annals of the Rheumatic Diseases. 82, 7, 2 p., e165.

    Research output: Contribution to journal › Comment/debate › Research

  75. Published

    Isolation, (bio)synthetic studies and evaluation of antimicrobial properties of drimenol-type sesquiterpenes of Termitomyces fungi

    Kreuzenbeck, N. B., Dhiman, S., Roman, D., Burkhardt, I., Conlon, B. H., Fricke, J., Guo, H., Blume, J., Görls, H., Poulsen, Michael, Dickschat, J. S., Köllner, T. G., Arndt, H. & Beemelmanns, C., 2023, In: Communications Chemistry. 6, 14 p., 79.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    cAMP competitively inhibits periplasmic phosphatases to coordinate nutritional growth with competence of Haemophilus influenzae

    Kronborg, Kristina & Zhang, Yong, 2023, In: Journal of Biological Chemistry. 299, 12, 13 p., 105404.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    A global catalog of whole-genome diversity from 233 primate species

    Kuderna, L. F. K., Gao, H., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A., Chuma, I. S. & 55 others, Horvath, J. E., Hvilsom, C., Juan, D., Frandsen, P., Schraiber, J. G., de Melo, F. R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., Valsecchi, J., Messias, M., da Silva, M. N. F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C. J., Zaramody, A., Jolly, C. J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J. H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., KU, thw266, Keyyu, J. D., Knauf, S., Le, M. D., Lizano, E., Merker, S., Navarro, A., Nadler, T., Khor, C. C., Lee, J., Tan, P., Lim, W. K., Kitchener, A. C., Zinner, D., Gut, I., Melin, A. D., Guschanski, K., Schierup, M. H., Beck, R. M. D., Umapathy, G., Roos, C., Boubli, J. P., Rogers, J., Farh, K. K. H. & Marques Bonet, T., 2023, In: Science (New York, N.Y.). 380, 6648, p. 906-913 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Biological soil crusts on agricultural soils of mesic regions promote microbial cross-kingdom co-occurrences and nutrient retention

    Kurth, J. K., Albrecht, M., Glaser, K., Karsten, U., Vestergaard, G., Armbruster, M., Kublik, S., Schmid, C. A. O., Schloter, M. & Schulz, S., 2023, In: Frontiers in Microbiology. 14, 16 p., 1169958.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Fitting Force Field Parameters to NMR Relaxation Data

    Kümmerer, Felix, Orioli, S. & Lindorff-Larsen, Kresten, 5 Jun 2023, In: Journal of Chemical Theory and Computation. 19, 12, p. 3741-3751 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Rare Catechol-O-methyltransferase Missense Variants Are Structurally Unstable Proteasome Targets

    Larsen, Fia Brunsgaard Valsted, Cagiada, Matteo, Dideriksen, J., Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2023, In: Biochemistry. 62, 8, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Fra forsøg til forankring: Flersproget faglig skrivning på bacheloruddannelsen i biokemi

    Larsen, Sanne, Laursen, Katja Årosin & Skriver, Karen, 3 May 2023, In: Dansk universitetspædagogisk tidsskrift [online]. p. 25-40 16 p.

    Research output: Contribution to journal › Journal article › Communication

  82. Published

    Mind the gap

    Larsen-Ledet, Sven & Stein, Amelie, 2023, In: Structure. 31, 6, p. 641-643 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  83. Published

    Rooting depth and xylem vulnerability are independent woody plant traits jointly selected by aridity, seasonality, and water table depth

    Laughlin, D. C., Siefert, A., Fleri, J. R., Tumber-Dávila, S. J., Hammond, W. M., Sabatini, F. M., Damasceno, G., Aubin, I., Field, R., Hatim, M. Z., Jansen, S., Lenoir, J., Lens, F., McCarthy, J. K., Niinemets, Ü., Phillips, O. L., Attorre, F., Bergeron, Y., Bruun, H. H., Byun, C. & 18 others, Ćušterevska, R., Dengler, J., De Sanctis, M., Dolezal, J., Jiménez-Alfaro, B., Hérault, B., Homeier, J., Kattge, J., Meir, P., Mencuccini, M., Noroozi, J., Nowak, A., Peñuelas, J., Schmidt, M., Škvorc, Ž., Sultana, F., Ugarte, R. M. & Bruelheide, H., 2023, In: New Phytologist. 240, 5, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Evidence that the domesticated fungus Leucoagaricus gongylophorus recycles its cytoplasmic contents as nutritional rewards to feed its leafcutter ant farmers

    A. Leal-Dutra, Caio, Yuen, L. M., Guedes, B. A. M., Contreras Serrano, Marta, Marques, P. E. & Shik, Jonathan Z., 2023, In: IMA Fungus. 14, 1, 13 p., 19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Horse vocal communication: Investigating the function and production mechanisms of biphonation

    Lefevre, R. A., 2023, Department of Biology, Faculty of Science, University of Copenhagen. 208 p.

    Research output: Book/Report › Ph.D. thesis › Research

  86. Published

    Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases

    Lehtimäki, J., Gupta, S., Hjelmsø, M., Shah, S., Thorsen, Jonathan Jan Ilve, Rasmussen, Morten Arendt, Soverini, M., Li, Xuan Ji, Russel, J., Trivedi, Urvish, Brix, S., Bønnelykke, Klaus, Chawes, Bo Lund Krogsgaard, Bisgaard, H., Sørensen, Søren Johannes & Stokholm, Jakob, 2023, In: Clinical and Experimental Allergy. 53, 12, p. 1268-1278 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Liquid-Liquid Phase Separation Primes Spider Silk Proteins for Fiber Formation via a Conditional Sticker Domain

    Leppert, A., Chen, G., Lama, D., Sahin, Cagla, Railaite, V., Shilkova, O., Arndt, T., Marklund, E. G., Lane, D. P., Rising, A. & Landreh, M., 2023, In: Nano Letters. 23, 12, 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Revised fission yeast gene and allele nomenclature guidelines for machine readability

    Lera-ramírez, M., Bähler, J., Mata, J., Rutherford, K., Hoffman, C. S., Lambert, S., Oliferenko, S., Martin, S. G., Gould, K. L., Du, L., Sabatinos, S. A., Forsburg, S. L., Nielsen, Olaf, Nurse, P. & Wood, V., 2023, In: Genetics. 225, 3, 10 p., iyad143.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Targeted imaging of uPAR expression in vivo with cyclic AE105 variants

    Leth, Julie Maja, Newcombe, Estella Anne, Grønnemose, A. L., Jørgensen, Jesper Tranekjær, Qvist, K., Clausen, Anne Skovsbo, Knudsen, Line Bruhn Schneider, Kjær, Andreas, Kragelund, Birthe Brandt, Jørgensen, Thomas Jørgen Dyreborg & Ploug, Michael, 2023, In: Scientific Reports. 13, 17 p., 17248.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Resolution of eleven reported and five novel Podaxis species based on ITS phylogeny, phylogenomics, morphology, ecology, and geographic distribution

    Li, Guangshuo, A. Leal-Dutra, Caio, Cuesta Mate, Ana, Conlon, B. H., Peereboom, N., Beemelmanns, C., Aanen, D. K., Rosendahl, Søren, de Beer, Z. W. & Poulsen, Michael, 2023, In: Persoonia: Molecular Phylogeny and Evolution of Fungi. 51, p. 257-279 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Convergent molecular evolution of thermogenesis and circadian rhythm in Arctic ruminants

    Li, M., Li, X., Wu, Z., Zhang, G., Wang, N., Dou, M., Liu, S., Yang, C., Meng, G., Sun, H., Hvilsom, C., Xie, G., Li, Y., Li, Z. H., Wang, W., Jiang, Y., Heller, Rasmus & Wang, Y., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 1999, 10 p., 20230538.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Seasonal and diel patterns of biogenic volatile organic compound fluxes in a subarctic tundra

    Li, Tao, Baggesen, N., Seco, Roger & Rinnan, Riikka, 2023, In: Atmospheric Environment. 292, 12 p., 119430.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    A catalog of bacterial reference genomes from cultivated human oral bacteria

    Li, W., Liang, H., Lin, X., Hu, T., Wu, Z., He, W., Wang, M., Zhang, J., Jie, Zhuye, Jin, X., Xu, X., Wang, J., Yang, H., Zhang, W., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: npj Biofilms and Microbiomes. 9, 1, 13 p., 45.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults

    Li, Xuan Ji, Brejnrod, A., Thorsen, J., Zachariasen, Trine, Trivedi, Urvish, Russel, J., Vestergaard, G. A., Stokholm, Jakob, Rasmussen, Morten Arendt & Sørensen, Søren Johannes, 2023, In: Nature Communications. 14, 1, 16 p., 8526.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    A clade of RHH proteins ubiquitous in Sulfolobales and their viruses regulates cell cycle progression

    Li, X., Lozano-Madueno, C., Martinez Alvarez, Laura & Peng, Xu, 2023, In: Nucleic acids symposium series. 51, 4, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Fast and accurate out-of-core PCA framework for large scale biobank data

    Li, Z., Meisner, Jonas & Albrechtsen, Anders, 2023, In: Genome Research. 33, 9, p. 1599-1608 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    The history of Coast Salish “woolly dogs” revealed by ancient genomics and Indigenous Knowledge

    Lin, A. T., Hammond-Kaarremaa, L., Liu, H-L., Stantis, C., McKechnie, I., Pavel, M., Pavel, S. S. M., Wyss, S. S., Sparrow, D. Q., Carr, K., Aninta, S. G., Perri, A., Hartt, J., Bergström, A., Carmagnini, A., Charlton, S., Dalén, L., Feuerborn, T. R., France, C. A. M., Gopalakrishnan, S. & 13 others, Grimes, V., Harris, A., Kavich, G., Sacks, B. N., Sinding, Mikkel Holger Strander, Skoglund, P., Stanton, D. W. G., Ostrander, E. A., Larson, G., Armstrong, C. G., Frantz, L. A. F., Hawkins, M. T. R. & Kistler, L., 2023, In: Science. 382, 6676, p. 1303-1309 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    A quantitative trait locus conferring flood tolerance to deepwater rice regulates the formation of two distinct types of aquatic adventitious roots

    Lin, C., Peralta Ogorek, Lucas León, Liu, D., Pedersen, Ole & Sauter, M., 2023, In: New Phytologist. 238, 4, 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Molecular basis for inhibition of type III-B CRISPR-Cas by an archaeal viral anti-CRISPR protein

    Lin, Jinzhong, Alfastsen, L., Bhoobalan, Yuvaraj & Peng, Xu, 2023, In: Cell Host and Microbe. 31, 11, p. 1837-1849.e5 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Underestimated Interannual Variability of Terrestrial Vegetation Production by Terrestrial Ecosystem Models

    Lin, S., Hu, Z., Wang, Y., Chen, X., He, B., Song, Z., Sun, S., Wu, C., Zheng, Y., Xia, X., Liu, L., Tang, Jing, Sun, Q., Joos, F. & Yuan, W., 2023, In: Global Biogeochemical Cycles. 37, 4, 15 p., e2023GB007696.

    Research output: Contribution to journal › Journal article › Research › peer-review

  101. Published

    The genomic landscape of reference genomes of cultivated human gut bacteria

    Lin, X., Hu, T., Chen, J., Liang, H., Zhou, J., Wu, Z., Ye, C., Jin, X., Xu, X., Zhang, W., Jing, X., Yang, T., Wang, J., Yang, H., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2023, In: Nature Communications. 14, 1, 11 p., 1663.

    Research output: Contribution to journal › Journal article › Research › peer-review

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