Department of Biology

AI Implementation and Capability Development in Manufacturing: An Action Research Case

Eklöf, Jon, Snis, U. L., Hamelryck, Thomas Wim, Grima, A. & Rønning, Ola, 2024, Proceedings of the 57th Hawaii International Conference on System Sciences - HICSS 2024. Hawaii International Conference on System Sciences, 10 p.

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Bacterial chromosomes and their replication

Frimodt-Møller, Jakob, Boesen, Thias Oberg, Charbon, Godefroid & Løbner-Olesen, Anders, 2024, Molecular Medical Microbiology. Tang, Y-W., Hindiyeh, M. Y., Liu, D., Sails, A., Spearman, P. & Zhang, J-R. (eds.). 3 ed. Academic Press, Vol. 1. p. 279-307 29 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Endogenous Tagging of Ciliary Genes in Human RPE1 Cells for Live-Cell Imaging

Kuhns, S., Juhl, A. D., Anvarian, Zeinab, Wüstner, D., Pedersen, Lotte Bang & Andersen, J. S., 2024, Methods in Molecular Biology. Humana Press, p. 147-166 20 p. (Methods in Molecular Biology, Vol. 2725).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Freshwater Ecosystems, Human Impact on

Sand-Jensen, Kaj, 2024, Encyclopedia of Biodiversity, Third Edition: Volume 1-7. 3 ed. Elsevier, p. 617-635 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Investigations on Microbes Attached to the Cuticle of Phytonematodes

Topalovic, Olivera, Radaković, Z. S., Elhady, A., Bredenbruch, S. & Heuer, H., 2024, Plant-Nematode Interactions. Molinari, S. (ed.). Vol. 2756. p. 257-270 14 p. (Methods in molecular biology (Clifton, N.J.)).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Type XXIII collagen

Crespo Bravo, Marina, Kehlet, S. N., Jessen, H. & Karsdal, M. A., 2024, Biochemistry of Collagens, Laminins and Elastin: Structure, Function and Biomarkers. 3 ed. Elsevier, p. 199-202 4 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Cilia and flagella

Pedersen, Lotte Bang, Jurisch-Yaksi, N., Schmid, F. M. & Christensen, Søren Tvorup, 2023, Encyclopedia of Cell Biology, Second Edition. Bradshaw, R. A., Hart, G. W. & Stahl, P. D. (eds.). 2 ed. Oxford: Elsevier, Vol. 3. p. 164-188 25 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Estuarine Seagrasses

Gruber, R. K., Gurbisz, C., Borum, Jens & Kemp, W. M., 2023, Estuarine Ecology. Crump, B. C., Testa, J. M. & Dunton, K. H. (eds.). 3 ed. John/Wiley & Sons, Inc. John/Wiley & Sons Ltd., 20 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Evolution of Bilateria from a Meiofauna Perspective—Miniaturization in the Focus

Worsaae, Katrine, Vinther, J. & Sørensen, Martin Vinther, 2023, New Horizons in Meiobenthos Research: Profiles, Patterns and Potentials. 1 ed. Springer, Cham, p. 1-31 31 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Impact of Microbial Symbionts on Fungus-Farming Termites and Their Derived Ecosystem Functions

Murphy, Rob, Sinotte, Veronica Marie, Schmidt, Suzanne, Li, Guangshuo, Hamilton Renalias, J., Koné, N. A. & Poulsen, Michael, 2023, Assessing the Microbiological Health of Ecosystems. Hurst, C. J. (ed.). Wiley, p. 185-203

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The Biology and Life Cycle of Enigmatic Crustacean Y-Larvae: A Review

Dreyer, N., Olesen, Jørgen, Grygier, M. J., Eibye-Jacobsen, Danny, Høeg, Jens Thorvald, Kerbl, A., Fujita, Y., Kolbasov, G. A., Savchenko, A. S., Worsaae, Katrine, Palero, F. & Chan, B. K. K., 2023, Oceanography and Marine Biology: An Annual Review, Volume 61. Hawkins, S. J., Todd, P. A. & Russell, B. D. (eds.). CRC Press, p. 81-126 46 p. (Oceanography and Marine Biology, Vol. 61).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Bioinformatics of transcription factor binding prediction

Navarro-Delgado, E. I., Salgado-Albarrán, M., Torres-Arciga, K., Alcaraz, N., Soto-Reyes, E., Herrera, L. A. & González-Barrios, R., 2022, Bioinformatics and Human Genomics Research. CRC Press, p. 203-221 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Foreword

Gawne, R. & Boomsma, Jacobus J., 2022, The Individual in the Animal Kingdom. MIT Press, 32 p.

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How Reciprocal Interactions Between the Tumor Microenvironment and Ion Transport Proteins Drive Cancer Progression

Elingaard-Larsen, L. O., Rolver, M. G., Sørensen, E. E. & Pedersen, Stine Helene Falsig, 2022, From Malignant Transformation to Metastasis: Ion Transport in Tumor Biology. Stock, C. & Pardo, L. A. (eds.). Springer, p. 1-38 38 p. (Reviews of Physiology, Biochemistry and Pharmacology, Vol. 182).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Lifetime Commitment between Social Insect Families and Their Fungal Cultivars Complicates Comparisons with Human Farming

Boomsma, Jacobus J., 2022, The Convergent Evolution of Agriculture in Humans and Insects. Schultz, T. R., Gawne, R. & Peregrine, P. N. (eds.). MIT Press, 13 p.

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Mixture Models for Spherical Data with Applications to Protein Bioinformatics

Mardia, K. V., Barber, S., Burdett, P. M., Kent, J. T. & Hamelryck, Thomas Wim, 2022, Directional Statistics for Innovative Applications: A Bicentennial Tribute to Florence Nightingale. Springer, p. 15-32 (Forum for Interdisciplinary Mathematics).

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Nutrition of Corals and Their Trophic Plasticity under Future Environmental Conditions

Dellisanti, Walter, Seveso, D. & Fang, J. K., 2022, Corals - Habitat Formers From the Shallow to the Deep. InTechOpen

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Persistent Topology of Protein Space

Hamilton, W., Borgert, J. E., Hamelryck, Thomas Wim & Marron, J. S., 2022, Research in Computational Topology 2. Springer, p. 223-244 (Association for Women in Mathematics Series, Vol. 30).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Sigalionidae, Pisioninae Ehlers, 1901

Gonzalez, B. C., Worsaae, Katrine & Eibye-Jacobsen, Danny, 2022, Pleistoannelida, Errantia II. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, p. 139-151 13 p. (Handbook of Zoology, Vol. 4).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Antibiotic Tolerance and Persistence Studied Throughout Bacterial Growth Phases

Maffei, E., Fino, C. & Harms, A., 2021, Bacterial Persistence: Methods and Protocols. Verstraeten, N. & Michiels, J. (eds.). 2. ed. ed. Humana Press, p. 23-40 18 p. (Methods in Molecular Biology, Vol. 2357).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Break-up of lake ice in the Arctic: strong linkage to mean summer temperature

Christoffersen, Kirsten Seestern, Raundrup, K. & Lauridsen, T. L., 2021, Greenland Ecosystem Monitoring Annual Report Cards 2020. Christensen, T. R., Arndal, M. F. & Topp-Jørgensen, E. (eds.). Aarhus University, DCE - Danish Centre for Environment and Energy, p. 14-15

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

DNA Double-Strand Break-Induced Gene Amplification in Yeast

Strucko, T., Lisby, Michael & Mortensen, U. H., 2021, Homologous Recombination: Methods and Protocols. Aguilera, A. & Carreira, A. (eds.). Humana Press, p. 239-252 14 p. (Methods in Molecular Biology, Vol. 2153).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Development and validation of new methods for measuring predation rates in mixoplanktonic protists

Ferreira, G. D., Calbet, A., Mansour, J. S., Not, F., Medic, Nikola, Hansen, Per Juel, Romano, F., Pitta, P., Flynn, K. J. & Mitra, A., 2021, Novel Approaches For Investigating Marine Planktonic Mixotrophy. Mitra, A., Flynn, K. J., Anestis, K., Mansour, J. S., Ferreira, G. D. & Calbet, A. (eds.). Zenodo, 69 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Ecology of Arctic Lakes and Ponds

Jeppesen, E., Christoffersen, Kirsten Seestern, Rautio, M. & Lauridsen, T. L., 2021, Arctic Ecology. Thomas, D. N. (ed.). Wiley-Blackwell, p. 159-180 22 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Efficient Generative Modelling of Protein Structure Fragments using a Deep Markov Model

Thygesen, Christian Bahne, Al-Sibahi, A. S., Steenmanns, C. S., Sanz Moreta, Lys, Sørensen, A. B. & Hamelryck, Thomas Wim, 2021, International Conference on Machine Learning, 18-24 July 2021, Virtual. PMLR, p. 10258-10267 (Proceedings of Machine Learning Research, Vol. 139).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Errantia incertae sedis: Nerillidae Levinsen, 1883

Worsaae, Katrine, 2021, Annelida: Pleistoannelida, Sedentaria III, Errantia I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 3. p. 215-228 (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Fjords and climate change

Juul-Pedersen, T., Winding, M. H. S., Sejr, M. K. & Hansen, Per Juel, 2021, Greenland Ecosystem Monitoring Annual Report Cards 2020. Christensen, T. B., Arndal, M. F. & Topp-Jørgensen, E. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 8-9 2 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Frustule Photonics and Light Harvesting Strategies in Diatoms

Goessling, J. W., Su, Y., Kühl, Michael & Ellegaard, Marianne, 2021, Diatom Morphogenesis. Wiley, p. 269-300 32 p.

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GEM MarineBasis – Programme description

Sejr, M. K., Winding, M. H. S., Juul-Pedersen, T., Hansen, Per Juel & Nielsen, T. G., 2021, Greenland Ecosystem Monitoring Annual Report Cards 2020. Christensen, T. R., Arndal, M. F. & Topp-Jørgensen, E. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 40-41 2 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

HABs under global change: Experimental conditions and approaches

van der Waal, D. B., Bach, L., Berdalet, E., Brandenburg, K. M., Suikkanen, S., Wohlrab, S., Hansen, Per Juel & Kremp, A., 2021, Guidelines for the study of climate change effects on HABs. Enevoldsen, H. & Sun, Y. (eds.). Unesco, p. 36-63 (IOC Manual and Guides, Vol. 88).

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research › peer-review

Imprimer La Lumiere – 3D Printing Bioluminescence for Architectural Materiality

Thomsen, M. R., Tamke, M., Mosse, A., Sieder-semlitsch, J., Bradshaw, H., Buchwald, E. F. & Moßhammer, Maria, 2021, Proceedings of the 2021 DigitalFUTURES: The 3rd International Conference on Computational Design and Robotic Fabrication (CDRF 2021). Yuan, P. F., Chai, H., Yan, C. & Leach, N. (eds.). Springer Singapore, p. 305-315 11 p. Chapter 28

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Physiological traits of the Greenland shark Somniosus microcephalus obtained during the TUNU-Expeditions to Northeast Greenland

Di Prisco, G., Ademollo, N., Ancora, S., Christiansen, J. S., Coppola, D., Corsolini, S., Ferrando, S., Ghigliotti, L., Giordano, D., Lynghammar, A., Nielsen, J., Pisano, E., Russo, R., Steffensen, John Fleng & Verde, C., 2021, Life in Extreme Environments: Insights in Biological Capability. Di Prisco, G., Edwards, H. G. M., Elster, J. & Huiskes, A. H. L. (eds.). Cambridge University Press, p. 11-41 (Ecological Reviews).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Protodrilidae Hatschek, 1888

Martínez, A., Purschke, G. & Worsaae, Katrine, 2021, Annelida: Pleistoannelida, Sedentaria III, Errantia I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 3. p. 299-337 (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Protodriloididae Purschke & Jouin, 1988

Martínez, A., Worsaae, Katrine & Purschke, G., 2021, Annelida: Pleistoannelida, Sedentaria III, Errantia I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 3. p. 338-353 (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Recombinant production of membrane proteins in yeast

Preisler, Sarah Spruce, Hansen, K. M., Nurup, C. N., Beich-Frandsen, M. & Pedersen, Per Amstrup, 2021, Methods in Enzymology. Pyle, A. M. & Christianson, D. W. (eds.). Academic Press, Vol. 660. p. 21-52 32 p. (Methods in Enzymology, Vol. 660).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Saccocirridae Czerniavsky, 1881

Di Domenico, M., Worsaae, Katrine & Purschke, G., 2021, Annelida: Pleistoannelida, Sedentaria III, Errantia I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 3. p. 280-298 (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Sedentaria incertae sedis: Diurodrilidae Kristensen & Niilonen, 1982

Worsaae, Katrine & Kristensen, Reinhardt Møbjerg, 2021, Annelida: Pleistoannelida, Sedentaria III, Errantia I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 3. p. 202-214 (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The Natural Environment and Its Biodiversity in Greenland During the Present Climate Change

Johnsen, I. & Heide-Jørgensen, H., 2021, Biogeography in the Sub-Arctic: The Past and Future of North Atlantic Biota. Panagiotakopulu, E. & Sadler, J. P. (eds.). Wiley, p. 339-358 19 p.

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Time-efficient Bayesian Inference for a (Skewed) von Mises Distribution on the Torus in a Deep Probabilistic Programming Language

Rønning, Ola, Ley, C., Mardia, K. V. & Hamelryck, Thomas Wim, 2021, 2021 IEEE International Conference on Multisensor Fusion and Integration for Intelligent Systems (MFI). IEEE, p. 1-8

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Bayesian protein superposition using Hamiltonian Monte Carlo

Sanz Moreta, Lys, Al-Sibahi, A. S. & Hamelryck, Thomas Wim, Oct 2020, Proceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020. IEEE, p. 1-11 9288019

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Analysis of caveolin in primary cilia

Morthorst, Stine Kjær, Mogensen, J. B., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2020, Caveolae: Methods and Protocols. Blouin, C. M. (ed.). Humana Press, p. 27-41 (Methods in Molecular Biology, Vol. 2169).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Annelida (excluding Clitellata and Oligochaeta)

Worsaae, Katrine, 2020, Guide to the Identification of Marine Meiofauna. Schmidt-Rhaesa, A. (ed.). Verlag Dr. Friedrich Pfeil, p. 239-270

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Archaeal Viruses and Their Interactions with CRISPR-Cas Systems

Garrett, Roger Antony, Shah, S. A., Martinez Alvarez, Laura & Peng, Xu, 2020, Biocommunication of Phages. 1 ed. Springer, p. 199-220 22 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Bier

Madsen, Henning Bang, 2020, Den danske Rødliste. Moeslund, J. E. (ed.). Aarhus Universitet, DCE – Nationalt Center for Miljø og Energi

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Circle-Seq: Isolation and Sequencing of Chromosome-Derived Circular DNA Elements in Cells

Møller, H. D., 2020, DNA Electrophoresis: Methods and Protocols. Hanada, K. (ed.). Humana Press, p. 165-181 17 p. (Methods in Molecular Biology, Vol. 2119).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Classifying disease-associated variants using measures of protein activity and stability

Jepsen, M. M., Fowler, D. M., Hartmann-Petersen, Rasmus, Stein, Amelie & Lindorff-Larsen, Kresten, 2020, Protein Homeostasis Diseases: Mechanisms and Novel Therapies. Pey, A. L. (ed.). Elsevier, p. 91-107

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Computing, Analyzing, and Comparing the Radius of Gyration and Hydrodynamic Radius in Conformational Ensembles of Intrinsically Disordered Proteins

Ahmed, M. C., Crehuet, R. & Lindorff-Larsen, Kresten, 2020, Intrinsically Disordered Proteins: Methods and Protocols. Kragelund, B. B. & Skriver, K. (eds.). Humana Press, p. 429-445 17 p. (Methods in Molecular Biology, Vol. 2141).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

De Novo Pathway Enrichment with KeyPathwayMiner

Alcaraz, N., Hartebrodt, A. & List, M., 2020, Protein-Protein Interaction Networks: Methods and Protocols. Canzar, S. & Ringeling, F. R. (eds.). Humana Press, p. 181-199 19 p. (Methods in Molecular Biology, Vol. 2074).

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De Novo Pathway-Based Classification of Breast Cancer Subtypes

List, M., Alcaraz, N. & Batra, R., 2020, Protein-Protein Interaction Networks: Methods and Protocols. Canzar, S. & Ringeling, F. R. (eds.). Humana Press, p. 201-213 13 p. (Methods in Molecular Biology, Vol. 2074).

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Enteropneusta

Kaul-Strehlow, S. & Worsaae, Katrine, 2020, Guide to the Identification of Marine Meiofauna. Schmidt-Rhaesa, A. (ed.). Verlag Dr. Friedrich Pfeil, p. 585-587

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Fundamentals of Bicarbonate Secretion in Epithelia

Novak, Ivana & Praetorius, J., 2020, Basic Epithelial Ion TransportPrinciples and Function: Ion Channels and Transporters of Epitheliain Health and Disease. Hamilton, K. L. & Devor, D. C. (eds.). 2. ed. Springer, Vol. 1. p. 461-541 (Physiology in Health and Disease).

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Grasslands of Northern Europe and the Baltic States

Dengler, J., Birge, T., Bruun, Hans Henrik, Rašomavicius, V., Rusina, S. & Sickel, H., 2020, Encyclopedia of the World's Biomes: Forests - Trees of Life. DellaSala, D. A. & DiPaolo, D. A. (eds.). Elsevier, Vol. 3. p. 689-702 14 p.

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Horizontal Transfer of Cyclic di-GMP Associated Genes: Theoretical Underpinnings and Future Perspectives

Madsen, Jonas Stenløkke, 2020, Microbial Cyclic Di-Nucleotide Signaling. Chou, S-H., Guiliani, N., Lee, V. T. & Römling, U. (eds.). Springer, p. 641-652 12 p.

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How to learn from inconsistencies: Integrating molecular simulations with experimental data

Orioli, S., Nørgrd Larsen, Andreas, Bottaro, S. & Lindorff-Larsen, Kresten, 2020, Computational Approaches for Understanding Dynamical Systems: Protein Folding and Assembly. Strodel, B. & Barz, B. (eds.). Academic Press, p. 123-176 54 p. (Progress in Molecular Biology and Translational Science, Vol. 170).

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Integrating Molecular Simulation and Experimental Data: A Bayesian/Maximum Entropy Reweighting Approach

Bottaro, S., Bengtsen, T. & Lindorff-Larsen, Kresten, 2020, Structural Bioinformatics: Methods and Protocols. Gáspári, Z. (ed.). Humana Press, p. 219-240 22 p. (Methods in Molecular Biology, Vol. 2112).

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Mixotrophy in Dinoflagellates: Prey Selection, Physiology and Ecological Importance

Hansen, Per Juel & Tillmann, U., 2020, Dinoflagellates: Classification, Evolution, Physiology and Ecological Significance. Durvasula, S. R. V. (ed.). Nova Science Publishers, p. 201-260 60 p.

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Origins: It takes a well rooted trunk to bear a tree - reductionist models of divergent evolution and further aspects of reality

Egel, Richard, 2020, Untangling Molecular Biodiversity: Explaining Unity and Diversity Principles of Organization with Molecular Structure and Evolutionary Genomics. Caetano-Anollés, G. (ed.). World Scientific, p. 223-282 60 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Production of Intrinsically Disordered Proteins for Biophysical Studies: Tips and Tricks

Pedersen, Christian Parsbæk, Seiffert, P., Brakti, Inna & Bugge, K., 2020, Intrinsically Disordered Proteins: Methods and Protocols. Kragelund, B. B. & Skriver, K. (eds.). Humana Press, p. 195-209 15 p. (Methods in Molecular Biology, Vol. 2141).

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Protein destabilization and degradation as a mechanism for hereditary disease

Nielsen, S. V., Schenstrøm, S. M., Christensen, Caspar Elo, Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2020, Protein Homeostasis Diseases: Mechanisms and Novel Therapies. Pey, A. L. (ed.). Elsevier, p. 111-125

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Scramble-in: A fast and efficient method to diversify and improve the yields of heterologous pathways in synthetic yeast

Swidah, R., Auxillos, Jamie Yam, Liu, W., Jones, S., Chan, T. F., Dai, J. & Cai, Y., 2020, Methods in Molecular Biology. Humana Press, p. 305-327 23 p. (Methods in Molecular Biology, Vol. 2205).

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Sinonasal cancer

Husgafvel-Pursiainen, K., Carton, M., Luce, D., Wolff, H., Holmila, R., Schlünssen, V., Lange, Jette Bornholdt & Hansen, J., 2020, Occupational Cancers. Anttila, S. & Boffetta, P. (eds.). 2. ed. ed. Springer, p. 147-178 32 p.

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Volume Regulation in Epithelia

Larsen, Erik Hviid & Hoffmann, E. K., 2020, Ion Channels and Transporters of Epitheliain Health and Disease. Hamilton, K. L. & Devor, D. C. (eds.). 2 ed. Springer, Vol. 1. p. 395-460 (Physiology in Health and Disease).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

A Probabilistic Programming Approach to Protein Structure Superposition

Sanz Moreta, Lys, Al-Sibahi, A. S., Theobald, D., Bullock, W., Rommes, B. N., Manoukian, Andreas & Hamelryck, Thomas Wim, 2019, 2019 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2019. Baruzzo, G., Daberdaku, S., Di Camillo, B., Furini, S., Giordano, E. D. & Nicosia, G. (eds.). IEEE, 5 p. 8791469

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Acrocirridae Banse, 1968

Martínez, A., Worsaae, Katrine & Núñez, J., 2019, Annelida: Annelida Basal Groups and Pleistoannelida, Sedentaria I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 1. p. 422-439 (Handbook of Zoology).

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Bierne i Danmark

Rasmussen, C., Dupont, Y. L. & Madsen, Henning Bang, 2019, Naturlommekalenderen 2020. Forlaget Rhodos, p. 210-221

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Current View of the Mechanisms Controlling the Transcription of the TOL Plasmid Aromatic Degradation Pathways

Domínguez-Cuevas, P. & Marqués, S., 2019, Aerobic Utilization of Hydrocarbons, Oils, and Lipids. Rojo, F. (ed.). Springer, p. 573-594 (Handbook of Hydrocarbon and Lipid Microbiology).

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Detection of slicer activity by immunopurified plant ARGONAUTE1

Arribas Hernandez, Laura, Vigh, Maria Louisa & Brodersen, Peter, 2019, Plant MicroRNAs: Methods and Protocols. Folter, S. D. (ed.). Humana Press, p. 295-316 22 p. (Methods in Molecular Biology, Vol. 1932).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Emerging Methods for Biological Control of Barley Diseases Including the Role of Endophytes

Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Jensen, Birgit, Murphy, B. R. & Hodkinson, T. R., 2019, Endophytes for a Growing World. Hodkinson, T. R., Doohan, F. M., Saunders, M. J. & Murphy, B. R. (eds.). Cambridge University Press, p. 93-119 27 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

In situ quantification of local O₂ concentration in 3D bioprinted constructs using luminescent nanoparticles

Gelinsky, M., Akkineni, A. R., Trampe, Erik, Koren, K., Lode, A., Krujatz, F. & Kühl, Michael, 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, p. 135 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium, Vol. 40).

Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review

Isolation of cancer stem cells from squamous cell carcinoma

Fontenete, S. & Perez-Moreno, Mirna, 2019, Skin Stem Cells: Methods and Protocols. Turksen, K. (ed.). 2. ed. ed. Humana Press, p. 407-414 8 p. (Methods in Molecular Biology, Vol. 1879).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Lobatocerebridae Rieger, 1980

Kerbl, A. & Worsaae, Katrine, 2019, Annelida: Annelida Basal Groups and Pleistoannelida, Sedentaria I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 1. p. 201-215 (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Mixotrophy among freshwater and marine protists

Hansen, Per Juel, Anderson, R., Stoecker, D. K., Decele, J., Altenburger, A., Blossom, H. E., Drumm, Kirstine, Mitra, A. & Flynn, K. J., 2019, Encyclopedia of Microbiology. Schmidt, T. (ed.). 4 ed. Academic Press, p. 199-210

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Protein stability and degradation in health and disease

Bjørnkjær, Lene, Abildgaard, A. B., Gersing, S. K., Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2019, Molecular Chaperones in Human Disorders. Donev, R. (ed.). Academic Press, p. 61-83 (Advances in Protein Chemistry and Structural Biology, Vol. 114).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Psammodrilidae Swedmark, 1952

Worsaae, Katrine, 2019, Annelida: Annelida Basal Groups and Pleistoannelida, Sedentaria I. Purschke, G., Böggemann, M. & Westheide, W. (eds.). De Gruyter, Vol. 1. p. 143-156 (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The short-term plasticity of Hong Kong's Platygyra sp. corals: insight on coral in-situ metabolism and ex-situ manipulations

Dellisanti, Walter, Tsang, R. H., Ang Jr, P., Wu, J. & Chan, L. L., 2019, 4th Xiamen Symposium on Marine Environmental Sciences (XMAS-IV): The Changing Ocean Environment: From a Multidisciplinary Perspective.

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

YeastFab: High-Throughput Genetic Parts Construction, Measurement, and Pathway Engineering in Yeast

Garcia-Ruiz, E., Auxillos, Jamie Yam, Li, T., Dai, J. & Cai, Y., 1 Jan 2018, Methods in Enzymology. Scrutton, N. (ed.). Academic Press, p. 277-306 30 p. (Methods in Enzymology, Vol. 608).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Drosophila as a Model for Neuroendocrine Control of Renal Homeostasis

Dow, J. A. T., Halberg, Kenneth Veland, Terhzaz, S. & Davies, S. A., 2018, Model Animals in Endocrinology: From Worms to Mouse to Man. Ludwig, M. & Levkowitz, G. (eds.). Newark: Wiley, 20 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The Fly Simulator: a simulation model of stable flies and their control

Nachman, Gøsta Støger & Skovgård, H., 2018, Pests and vector-borne diseases in the livestock industry. Garros, C., Takken, W., Bouyer, J. & Smallegange, R. C. (eds.). Wageningen Academic Publishers, p. 465-494 30 p. (Ecology and Control of Vector-Borne Diseases, Vol. 5).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Characterization of Dynamic IDP Complexes by NMR Spectroscopy

Prestel, Andreas, Bugge, K., Staby, L., Hendus-Altenburger, R. & Kragelund, Birthe Brandt, 2018, Intrinsically Disordered Proteins. Rhoades, E. (ed.). Academic Press, p. 193-226 34 p. (Methods in Enzymology, Vol. 611).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Ecologically Benign Invasions: The Invasion and Adaptation of Common Waxbills (Estrilda astrild) in Iberia

Cardoso, G. C. & Reino, L., 2018, Histories of Bioinvasions in the Mediterranean. Queiroz, A. I. & Pooley, S. (eds.). Springer, p. 149-169 (Environmental History, Vol. 8).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Environmental Adaptations: Encystment and Cyclomorphosis

Guidetti, R. & Møbjerg, Nadja, 2018, Water Bears: The Biology of Tardigrades. Schill, R. O. (ed.). Springer, p. 249-271 (Zoological Monographs, Vol. 2).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Evolutionary Adaptations to Cysteine-rich Peptide Folding

Safavi, Helena, Foged, M. M. & Ellgaard, Lars, 2018, Oxidative Folding of Proteins: Basic Principles, Cellular Regulation and Engineering . Feige, M. J. (ed.). Royal Society of Chemistry, p. 99-128 30 p. (Chemical Biology, Vol. 9).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Free-Living Protozoa with Endosymbiotic Methanogens

Fenchel, Tom & Finlay, B. J., 2018, (Endo)symbiotic Metanogenic Archaea. Hackstein, J. H. P. (ed.). 2. ed. Springer, p. 1-11 11 p. (Microbiology Monographs, Vol. 19).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

High definition urban fashion: Proteins reveal preferred resources for medieval leather shoes

Brandt, Luise Ørsted, 2018, Urban Network Evolutions: Towards a high-definition archaeology. Aarhus: Aarhus University Press, p. 241-247 7 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Imaging of DNA Ultrafine Bridges in Budding Yeast

Quevedo Rodriguez, O. & Lisby, Michael, 2018, Genome Instability: Methods and Protocols. Muzi-Falconi, M. & Brown, G. W. (eds.). Humana Press, p. 483-493 11 p. (Methods in Molecular Biology, Vol. 1672).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Morphology and Functional Anatomy

Møbjerg, Nadja, Jørgensen, Aslak, Kristensen, Reinhardt Møbjerg & Cardoso Neves, R. A., 2018, Water Bears: The Biology of Tardigrades. Schill, R. O. (ed.). Springer, p. 57-94 (Zoological Monographs, Vol. 2).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Optical O₂ sensing in aquatic systems and organisms

Koren, K. & Kühl, Michael, 2018, Quenched-phosphorescence detection of molecular oxygen: applications in life sciences. Papkovsky, D. B. & Dmitriev, R. I. (eds.). Royal Society of Chemistry, p. 145-174 30 p. (RSC Detection Science).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Photosynthesis and Metabolism of Seagrasses

Larkum, A. W. D., Pernice, M., Schliep, M., Davey, P., Szabo, M., Raven, J. A., Lichtenberg, Mads, Brodersen, Kasper Elgetti & Ralph, P. J., 2018, Seagrasses of Australia: Structure, Ecology and Conservation. Larkum, A. W. D., Kendrick, G. A. & Ralph, P. J. (eds.). Springer, p. 315-342

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Phylogeny and Integrative Taxonomy of Tardigrada

Jørgensen, Aslak, Kristensen, Reinhardt Møbjerg & Møbjerg, Nadja, 2018, Water Bears: The Biology of Tardigrades. Schill, R. O. (ed.). Springer, p. 95-114 (Zoological Monographs, Vol. 2).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Rhizome, Root/Sediment interactions, Aerenchyma and Internal Pressure Changes in Seagrasses

Brodersen, Kasper Elgetti, Kühl, Michael, Nielsen, D. A., Pedersen, Ole & Larkum, A. W. D., 2018, Seagrasses of Australia: Structure, Ecology and Conservation. Larkum, A. W. D., Kendrick, G. A. & Ralph, P. J. (eds.). Springer, p. 393-418 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Sugar and Sugar Alcohol Production in Genetically Modified Cyanobacteria

Frigaard, Niels-Ulrik, 2018, Genetically Engineered Foods. Holban, A. M. & Grumezescu, A. M. (eds.). Academic Press, p. 31-47 17 p. (Handbook of Food Bioengineering, Vol. 6).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Toroidal Diffusions and Protein Structure Evolution

Garcia Portugues, E., Golden, M., Sørensen, Michael, Mardia, K. V., Hamelryck, Thomas Wim & Hein, J., 2018, Applied Directional Statistics: Modern Methods and Case Studies. Ley, C. & Verdebout, H. (eds.). CRC Press, 34 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Transcriptome-Wide Analysis of Protein-RNA and RNA-RNA Interactions in Pathogenic Bacteria

Tree, J. J., Gerdes, K. & Tollervey, D., 2018, High-Density Sequencing Applications in Microbial Molecular Genetics. Carpousis, A. J. (ed.). Academic Press, Vol. 612. p. 467-488 (Methods in Enzymology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Viral genome isolation from human faeces for succession assessment of the human gut virome

Mayo Munoz, D., 2018, The Human Virome: Methods and Protocols. Moya, A. & Brocal, V. P. (eds.). Humana Press, p. 97-108 12 p. (Methods in Molecular Biology, Vol. 1838).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Vision Made Easy: Cubozoans Can Advance Our Understanding of Systems-Level Visual Information Processing

Bielecki, J. & Garm, Anders Lydik, 2018, Marine Organisms as Model Systems in Biology and Medicine. Kloc, M. & Kubiak, J. Z. (eds.). Springer, p. 599-624 (Results and Problems in Cell Differentiation, Vol. 65).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Arctic Soil Microbial Sensitivity to Seasonal Dynamics and Climate Change

Priemé, Anders, Blok, D., Haugwitz, M. S., Voriskova, J. & Elberling, Bo, 2017, Microbial Biomass: A Paradigm Shift in Terrestrial Biogeochemistry. Tate, K. R. (ed.). World Scientific, p. 275-307

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

CRISPR History: Discovery, Characterization, and Prosperity

Han, W. & She, Q., 2017, CRISPR in Animals and Animal Models. Torres-Ruiz, R. & Rodriguez-Perales, S. (eds.). Elsevier, p. 1-21 20 p. (Progress in Molecular Biology and Translational Science, Vol. 152).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Chitin and stress induced protein kinase activation

Kenchappa, C. S., Azevedo da Silva, R., Bressendorff, Simon, Stanimirovic, S., Olsen, J. V., Petersen, Morten & Mundy, J., 2017, Plant pattern recognition receptors: methods and protocols. Shan, L. & He, P. (eds.). Springer, p. 185-194 10 p. (Methods in Molecular Biology, Vol. 1578).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Chitin-induced responses in the moss Physcomitrella patens

Bressendorff, Simon, Rasmussen, M. W., Petersen, Morten & Mundy, J., 2017, Plant pattern recognition receptors: methods and protocols. Shan, L. & He, P. (eds.). Springer, p. 317-324 8 p. (Methods in Molecular Biology, Vol. 1578).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

DNA damage repair in Archaea

She, Q., Feng, X. & Han, W., 2017, Biocommunication of Archaea. Witzany, G. (ed.). Springer, p. 305-318 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Deep Recurrent Conditional Random Field Network for Protein Secondary Prediction

Johansen, A. R., Sønderby, C. K., Sønderby, S. K. & Winther, O., 2017, ACM-BCB '17: Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. p. 73-78 6 p.

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

DiskoBasis monitering

Sigsgaard, Charlotte, Jørgensen, C. J., Christiansen, C. T., Hansen, Per Juel, Christoffersen, Kirsten Seestern, McConnell, A., Mølgaard, K. A., Kroon, Aart, Friborg, Thomas, Hansen, Birger & Elberling, Bo, 2017, Arctic Station Annual Report 2015. Kroon, A. & Sigsgaard, C. (eds.). København: Københavns Universitet, p. 7-13 7 p. (Annual Report).

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research › peer-review

Ectomycorrhizal Fungal Responses to Forest Liming and Wood Ash Addition: Review and Meta-analysis

Kjøller, Rasmus, Cruz-Paredes, C. & Clemmensen, K. E., 2017, Soil Biological Communities and Ecosystem Resilience . Lukac, M., Grenni, P. & Gamboni, M. (eds.). Springer, Vol. 4. p. 223-252 (Sustainability in Plant and Crop Protection).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Lake Cadagno: microbial life in crenogenic meromixis

Tonolla, M., Storelli, N., Danza, F., Gulati, R. D. (ed.), Ravasi, D., Peduzzi, S., Posth, Nicole Rita Elisabeth, Cox, R. P., Jørgensen, M. F., Gregersen, Lea Haarup, Daugbjerg, Niels & Frigaard, Niels-Ulrik, 2017, Ecology of Meromictic Lakes. Gulati, R. D., Zadereev, E. S. & Degermendzhi, A. G. (eds.). Springer, p. 155-186 32 p. (Ecological Studies, Vol. 228).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Palaeoenvironmental history of the Baltic Sea: one of the largest brackish-water ecosystems in the world

Weckström, K., Lewis, J. P., Andrén, E., Ellegaard, Marianne, Rasmussen, P. & Telford, R., 2017, Applications of paleoenvironmental techniques in estuarine studies. Weckström, K., Saunders, K. M., Gell, P. A. & Skillbeck, C. G. (eds.). Springer, p. 615-662 48 p. (Developments in Paleoenvironmental Research, Vol. 20).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Synthetic biology of cyanobacteria for production of biofuels and high-value products

Klemenčič, M., Nielsen, A. Z., Sakuragi, Y., Frigaard, Niels-Ulrik, Čelešnik, H., Jensen, Poul Erik & Dolinar, M., 2017, Microalgae-Based Biofuels and Bioproducts: From Feedstock Cultivation to End-Products. Gonzalez-Fernandez, C. & Muñoz, R. (eds.). Duxford, UK: Elsevier Science Inc., p. 305-325 21 p. (Woodhead Publishing Series in Energy).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The waterscape at high altitudes

Jacobsen, Dean & Dangles, O., 2017, Ecology of High Altitude Waters. Jacobsen, D. & Dangles, O. (eds.). Oxford University Press, p. 21-39 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Type III CRISPR/Cas system: introduction and its application for genetic manipulations

Liu, T., Pan, S., Li, Y., Peng, N. & She, Q., 2017, The CRISPR/Cas system: emerging technology and application. Jamal, M. (ed.). Caister Academic Press, p. 1-13 13 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Volatile organic compounds in integrated pest management of Brassica oilseed crops

Himanen, S. J., Li, Tao, Blande, J. D. & Holopainen, J. K., 2017, Integrated management of insect pests on canola and other Brassica oilseed crops. Reddy, G. V. P. (ed.). CABI Publishing, p. 281-294 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Stress Responses in Staphylococcus aureus

Frees, Dorte & Ingmer, Hanne, Oct 2016, Staphylococcus: Genetics and Physiology. Somerville, G. A. (ed.). Caister Academic Press, p. 221-248

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Autoencoding beyond pixels using a learned similarity metric

Larsen, A. B. L., Sønderby, S. K., Larochelle, H. & Winther, Ole, 2016, Proceedings of The 33rd International Conference on Machine Learning. Balcan, M. F. & Weinberger, K. Q. (eds.). p. 1558–1566 9 p. (JMLR: Workshop and Conference Proceedings, Vol. 48).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Biotechnology of anoxygenic phototrophic bacteria

Frigaard, Niels-Ulrik, 2016, Anaerobes in biotechnology. Hatti-Kaul, R., Mamo, G. & Mattiasson, B. (eds.). Springer, p. 139-154 16 p. (Advances in Biochemical Engineering. Biotechnology, Vol. 156).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Cilia and flagella

Schmid, F. M., Christensen, Søren Tvorup & Pedersen, Lotte Bang, 2016, Encyclopedia of cell biology. Bradshaw, R. A. & Stahl, P. D. (eds.). 1 ed. Elsevier, Vol. 2. p. 660-676 17 p.

Research output: Chapter in Book/Report/Conference proceeding › Encyclopedia chapter › Research › peer-review

Exercise-induced regulation of the Na, K-pump in skeletal muscles

Juel, C., 2016, Regulation of membrane Na⁺-K⁺ ATPase. Chakraborti, S. & Dhalla, N. S. (eds.). Springer, p. 349-357 9 p. (Advances in Biochemistry in Health and Disease, Vol. 15).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Fundamentals of bicarbonate secretion in epithelia

Novak, Ivana & Prætorius, J., 2016, Ion channels and transporters of epithelia in health and disease. Hamilton, K. L. & Devor, D. C. (eds.). New York, NY: Springer, p. 187-263 77 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

High-throughput siRNA screening applied to the ubiquitin-proteasome system

Poulsen, E. G., Nielsen, S. V., Pietras, E. J., Johansen, Jens Vilstrup, Steinhauer, C. & Hartmann-Petersen, Rasmus, 2016, Proteostasis. Matthiesen, R. (ed.). Springer, p. 421-439 19 p. (Methods in Molecular Biology, Vol. 1449).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Immunofluorescence Microscopy and mRNA Analysis of Human Embryonic Stem Cells (hESCs) Including Primary Cilia Associated Signaling Pathways

Vestergaard, M. L., Awan, A., Warzecha, C. B., Christensen, Søren Tvorup & tcg964, tcg964, 2016, Human Embryonic Stem Cell Protocols. Springer Science+Business Media, Vol. 1307. p. 123-140 (Methods in molecular biology (Clifton, N.J.)).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Ladder variational autoencoders

Sønderby, C. K., Raiko, T., Maaløe, L., Sønderby, S. K. & Winther, Ole, 2016, Advances in Neural Information Processing Systems 29 (NIPS 2016). Lee, D. D., Sugiyama, M., Luxburg, U. V., Guyon, I. & Garnett, R. (eds.). Curran Associates, Inc., p. 3745-3753 9 p. (Advances in Neural Information Processing Systems, Vol. 29).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Microbial virulence and interactions with metals

German, N., Lüthje, F. L., Hao, X., Rønn, Regin & Rensing, C. G. T., 2016, Host-microbe interactions. Pruitt, K. (ed.). Elsevier, p. 27-49 23 p. (Progress in Molecular Biology and Translational Science, Vol. 142).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

NAC transcription factors: from structure to function in stress-associated networks

Welner, D. H., Deeba, F., Lo Leggio, Leila & Skriver, Karen, 2016, Plant transcription factors: evolutionary, structural and functional aspects. Gonzalez, D. H. (ed.). Academic Press, p. 199-212 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Sequential neural models with stochastic layers

Fraccaro, M., Sønderby, S. K., Paquet, U. & Winther, Ole, 2016, Neural Information Processing Systems 2016. Lee, D. D., Sugiyama, M., Luxburg, U. V., Guyon, I. & Garnett, R. (eds.). Neural Information Processing Systems Foundation, p. 2207-2215 9 p. (Advances in Neural Information Processing Systems, Vol. 29).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Targeting of ASH domain-containing proteins to the centrosome

Verdier, P., Morthorst, Stine Kjær & Pedersen, Lotte Bang, 2016, Cilia. Satir, P. & Tvorup Christensen, S. (eds.). Springer, p. 15-33 19 p. (Methods in Molecular Biology, Vol. 1454).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Towards a cognitive semiotics of science: the case of physical chemistry

May, M., Skriver, Karen & Dandanell, Gert, 2016, Meaning, mind and communication: explorations in cognitive semiotics. Zlatev, J., Sonesson, G. & Konderak, P. (eds.). Peter Lang, p. 101-126 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Viden og krop: den varme fornuft

Hoffmeyer, J., 2016, Den levende kroppen. : mot en ny forståelse av menneske og natur. von der Fehr, D. (ed.). Vidarforlaget, p. 57-75 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Volume regulation in epithelia

Larsen, Erik Hviid & Hoffmann, E. K., 2016, Ion channels and transporters of epithelia in health and disease. Hamiltion, K. L. & Devor, D. C. (eds.). Springer, Vol. Part 1. p. 131-185 55 p. (Physiology in Health and Disease).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Zackenberg Basis: The BioBasis programme

Hansen, L. H., Hansen, J., Nielsen, P. S., Christoffersen, Kirsten Seestern, Mosbacher, J. B. & Schmidt, N. M., 2016, Zackenberg Ecological Research Operations: 20th annual report 2014. Jensen, L. M., Topp-Jørgensen, E. & Christensen, T. R. (eds.). Aarhus University, p. 38-64 27 p. (Zackenberg Annual Report, Vol. 20).

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Archaeal viruses of the sulfolobales: isolation, infection, and CRISPR spacer acquisition

Erdmann, S. & Garrett, Roger Antony, 2015, CRISPR: methods and protocols. Lundgren, M., Charpentier, E. & Fineran, P. C. (eds.). Springer, p. 223-232 10 p. (Methods in Molecular Biology, Vol. 1311).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Convolutional LSTM networks for subcellular localization of proteins

Sønderby, S. K., Sønderby, C. K., Nielsen, H. & Winther, Ole, 2015, Algorithms for Computational Biology. Dediu, A-H., Hernández-Quiroz, F., Martín-Vide, C. & Rosenblueth, D. A. (eds.). Springer, p. 68-80 13 p. (Lecture notes in computer science, Vol. 9199).

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Genome-wide detection of selection and other evolutionary forces

Xu, Z. & Zhou, R., 2015, Bacterial pangenomics: methods and protocols. Mengoni, A., Galardini, M. & Fondi, M. (eds.). Springer, p. 271-287 17 p. (Methods in Molecular Biology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Lichens

Søchting, Ulrik, 2015, Nepal: An introduction to the natural history, ecology and human environment of the Himalayas. Miehe, G. & Pendry, C. (eds.). Edinburgh: Royal Botanic Garden Edinburgh, p. 191 9 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Linking the microbial community processes to the contamination by priority organic substances: in situ observations on coastal sediments of the Adriatic Sea (Italy)

Zoppini, A., Ademollo, N., Amalfitano, S., Dellisanti, Walter, Lungarini, S., Miserocchi, S., Patrolecco, L. & Langone, L., 2015, Proceedings PERSEUS Scientific Conference “Integrated Marine Research in the Mediterranean and the Black Sea”. Brussels. p. 7-9 3 p.

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Microbial processes and organic priority substances in marine coastal sediments (Adriatic Sea, Italy)

Zoppini, A., Ademollo, N., Amalfitano, S., Dellisanti, Walter, Lungarini, S., Miserocchi, S., Patrolecco, L. & Langone, L., 2015, EGU General Assembly Conference Abstracts. p. 10443 1 p.

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Naturtyper i Danmark: Småbiotoperne

Vestergaard, P., 2015, Atlas Flora Danica. Hartvig, P. & Vestergaard, P. (eds.). København: Gyldendal, Vol. 1. p. 127-134 8 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Naturtyper i Danmark: Vandområderne

Sand-Jensen, Kaj, 2015, Atlas Flora Danica. Hartvig, P. & Vestergaard, P. (eds.). København: Gyldendal, Vol. 1. p. 107-116 10 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Naturtyper i Danmark: Kysterne

Vestergaard, P., 2015, Atlas Flora Danica. Hartvig, P. & Vestergaard, P. (eds.). København: Gyldendal, Vol. 1. p. 57-75 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Naturtyper i Danmark: Skov og Krat

Petersen, Peter Milan, 2015, Atlas Flora Danica. Hartvig, P. & Vestergaard, P. (eds.). København: Gyldendal, Vol. 1. p. 43-56 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Naturtyper i Danmark: Græslandet

Bruun, Hans Henrik, 2015, Atlas Flora Danica. Hartvig, P. & Vestergaard, P. (eds.). København: Gyldendal, Vol. 1. p. 86-93 8 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Nerillidae - kaninoronmaskar

Nygren, A. & Worsaae, Katrine, 2015, Nationalnyckeln till Sveriges flora och fauna: Ringmaskar: Havsborstmaskar. Annelida: Polychaeta. Samuelsson, H., Nygren, A. & Pleijel, F. (eds.). p. 309-313 5 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Organe der osmoregulation und exkretion

Møbjerg, Nadja, 2015, Spezielle Zoologie. Teil 2: Wirbel oder Schädeltiere . Westheide, W. & Rieger, G. (eds.). 3 ed. Springer, p. 148-156 9 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Proteins, physics and probability kinematics: a Bayesian formulation of the protein folding problem

Hamelryck, Thomas Wim, Boomsma, Wouter, Ferkinghoff-Borg, J., Foldager, J. I., Frellsen, J., Haslett, J. & Theobald, D., 2015, Geometry driven statistics. Dryden, I. L. & Kent, J. T. (eds.). Wiley, p. 356-376 21 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Reproducible analysis of sequencing-based RNA structure probing data with user-friendly tools

Kielpinski, L. J., Sidiropoulos, N. & Vinther, Jeppe, 2015, Structures of large RNA molecules and their complexes. Woodson, S. A. & Allain, F. H. T. (eds.). Elsevier, p. 153-180 28 p. (Methods in Enzymology, Vol. 558).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Økologiske faktorer af betydning for planternes udbredelse

Vestergaard, P., 2015, Atlas Flora Danica . Hartvig, P. & Vestergaard, P. (eds.). København: Gyldendal, Vol. 1. p. 25-42 18 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

“Crustacea”: Cirripedia

Høeg, Jens Thorvald, Deutsch, J., Chan, B. K. K. & Le, H. S., 2015, Evolutionary developmental biology of invertebrates 4: Ecdysozoa II: "Crustacea". Wanninger, A. (ed.). Springer, Vol. 4. p. 153-181 29 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Algorithms for mapping high-throughput DNA sequences

Frellsen, J., Menzel, P. & Krogh, Anders, 2014, Comprehensive Biomedical Physics: Bioinformatics. Brahme, A. (ed.). Elsevier, Vol. 6. p. 41-50 10 p. (Reference Module in Biomedical Sciences, Vol. 6).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Approaches to link RNA secondary structures with splicing regulation

Plass, M. & Eyras, E., 2014, Spliceosomal Pre-mRNA Splicing. Hertel, K. J. (ed.). Springer Science+Business Media, Vol. 1126. p. 341-356 16 p. (Methods in Molecular Biology, Vol. 1126).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

DNA Methylation

Marinus, M. G. & Løbner-Olesen, Anders, 2014, Synthesis and Processing of Macromolecules. Lovett, S. T. (ed.). ASM Press, (EcoSal Plus: Domain 4).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Direct and diffuse light propagation through coral tissue

Wangpraseurt, D. & Kühl, Michael, 2014, SPIE Proceedings. Jansen, E. D., Thomas, R. J., Wilmink, G. J. & Ibey, B. L. (eds.). SPIE - International Society for Optical Engineering, Vol. 8941. 6 p. (SPIE Proceedings, Vol. 8941).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

DiskoBasis Monitoring

Sigsgaard, Charlotte, Jørgensen, C. J., Lund, M., Christoffersen, Kirsten Seestern, Stecher, O., Mølgaard, K. A., Hansen, Birger, Madsen, M. & Elberling, Bo, 2014, Arctic Station / Annual Report 2014. Faculty of Science, University of Copenhagen, p. 7-12 6 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Ecology of Arctic lakes

Christoffersen, Kirsten Seestern, 2014, Zackenberg Ecological Research Operations: 19^th Annual Report 2013. Jensen, L. M., Christensen, T. R. & Schmidt, N. M. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 102-104 3 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Force spectroscopy of DNA and RNA: structure and kinetics from single-molecule experiments

Ettlinger, R. B., Sørensen, Michael Askvad & Oddershede, L. B., 2014, Nucleic Acid Nanotechnology. Springer, Vol. 29. p. 23-52 31 p. (Nucleic Acids and Molecular Biology, Vol. 29).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Haslea ostrearia-like diatoms: biodiversity out of the blue

Gastineau, R., Davidovich, N., Hansen, Gert, Rines, J., Wulff, A., Kaczmarska, I., Ehrman, J., Hermann, D., Maumus, F., Hardivillier, Y., Leignel, V., Jacquette, B., Méléder, V., Hallegraeff, G., Yallop, M., Perkins, R., Cadoret, J., Saint-Jean, B., Carrier, G. & Mouget, J., 2014, Advances in Botanical Research : Sea Plants. Jacquot, J-P. & Gadal, P. (eds.). Elsevier, Vol. 71. p. 441-465 25 p. (Advances in Botanical Research, Vol. 71).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Introduction

Martin, J. W., Olesen, Jørgen & Høeg, Jens Thorvald, 2014, Atlas of crustacean larvae. Martin, J. W., Olesen, J. & Høeg, J. T. (eds.). Johns Hopkins University Press, p. 1-7 7 p.

Research output: Chapter in Book/Report/Conference proceeding › Preface/postscript › Research › peer-review

Monitoring DiskoBasis

Sigsgaard, Charlotte, Stecher, O., Elberling, Bo & Christoffersen, Kirsten Seestern, 2014, Arctic Station / Annual Report 2013. Warming Perlt, T. & Seestern Christoffersen, K. (eds.). Faculty of Science, University of Copenhagen, p. 6-9 4 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Nerillidae Levinsen, 1883

Worsaae, Katrine, 2014, Handbook of Zoology Online. Beutel, R. G., Kristensen, N. P., Leschen, R., Purschke, G., Westheide, W. & Zachos, F. (eds.). Berlin: De Gruyter, (Handbook of Zoology).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Semiotic scaffolding: a biosemiotic link between sema and soma

Hoffmeyer, J., 2014, The catalyzing mind: Beyond models of causality. Cabell, K. R. & Valsiner, J. (eds.). Dordrecht: Springer Science+Business Media, p. 95-110 16 p. (Annals of Theoretical Psychology, Vol. 11).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Structural dynamics and regulation of the mammalian SLC9A family of Na⁺/H⁺ exchangers

Hendus-Altenburger, R., Kragelund, Birthe Brandt & Pedersen, Stine Helene Falsig, 2014, Current Topics in Membranes: Exchangers. Bevensee, M. O. (ed.). Elsevier, Vol. 73. p. 69-148 80 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Summary and synopsis

Martin, J. W., Olesen, Jørgen & Høeg, Jens Thorvald, 2014, Atlas of crustacean larvae. Martin, J. W., Olesen, J. & Høeg, J. T. (eds.). Johns Hopkins University Press, p. 311-314 4 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The crustacean nauplius

Martin, J. W., Olesen, Jørgen & Høeg, Jens Thorvald, 2014, Atlas of crustacean larvae. Martin, J. W., Olesen, J. & Høeg, J. T. (eds.). Johns Hopkins University Press, p. 8-16 9 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Underwater photosynthesis and internal aeration of submerged terrestrial wetland plants

Pedersen, Ole & Colmer, T. D., 2014, Low-Oxygen Stress in Plants: Oxygen Sensing and Adaptive Responses to Hypoxia. Dongen, J. T. V. & Licausi, F. (eds.). Springer, Vol. 21. p. 315-327 13 p. (Plant Cell Monographs).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Zackenberg Basic: The BioBasis programme

Hansen, L. H., Hansen, J., Nielsen, P. S., Humaidan, J., Christoffersen, Kirsten Seestern & Schmidt, N. M., 2014, Zackenberg Ecological Research Operations: 19^th Annual Report 2013. Jensen, L. M., Christensen, T. R. & Schmidt, N. M. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 39-65 27 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Newly isolated Chl d-containing cyanobacteria

Li, Y., Larkum, A., Schliep, M., Kühl, Michael, Neilan, B. & Chen, M., 28 Feb 2013, Photosynthesis Research for Food, Fuel and Future: 15th International Conference on Photosynthesis. Kuang, T., Lu, C. & Zhang, L. (eds.). Springer Science+Business Media, p. 686-690 5 p. (Advanced Topics in Science and Technology in China).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Schizosaccharomyces pombe, the Principal Subject of Fission Yeast Genetics

Egel, Richard, 2013, Brenner's Encyclopedia of Genetics (Second Edition). Maloy, S. & Hughes, K. (eds.). Elsevier, p. 339-341 3 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Analysis of microtubule plus-end-tracking proteins in cilia

Larsen, J., Grigoriev, I., Akhmanova, A. & Pedersen, Lotte Bang, 2013, Cilia, Part A. Marshall, W. F. (ed.). Elsevier, p. 105-122 18 p. (Methods in Enzymology, Vol. 524).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Archaeal type II toxin-antitoxins

Shah, S. A. & Garrett, Roger Antony, 2013, Prokaryotic toxin-antitoxins. Gerdes, K. (ed.). Springer, p. 225-238 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Biology, biodiversity and application potential of thermophilic viruses

Uldahl, K. B. & Peng, Xu, 2013, Thermophilic Microbes in Environmental and Industrial Biotechnology: Biotechnology of Thermophiles. Satyanarayana, T., Littlechild, J. & Kawarabayasi, Y. (eds.). Springer, p. 271-304 34 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Biosemiotics

Hoffmeyer, J., 2013, Encyclopedia of Science and Religion. Runehov, A. L. C. & Oviedo, L. (eds.). Springer, p. 264-271 8 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Combining the multicanonical ensemble with generative probabilistic models of local biomolecular structure

Frellsen, J., Hamelryck, Thomas Wim & Ferkinghoff-Borg, J., 2013, Proceedings of the 59th World Statistics Congress of the International Statistical Institute, 2013 . Hague, p. 139-144 6 p.

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research

Conformational dynamics of single protein molecules studied by direct mechanical manipulation

Heiðarsson, P. O., Naqvi, M. M., Sonar, P., Valpapuram, I. & Cecconi, C., 2013, Dynamics of Proteins and Nucleic Acids. Karabencheva-Christova, T. (ed.). Elsevier, Vol. 92. p. 93-133 41 p. (Advances in Protein Chemistry and Structural Biology, Vol. 92).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Developmental checkpoints and feedback circuits time insect maturation

Rewitz, Kim, Yamanaka, N. & O'Connor, M. B., 2013, Animal metamorphosis. Shi, Y-B. (ed.). Academic Press, Vol. 103. p. 1-33 33 p. (Current Topics in Developmental Biology, Vol. 103).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Discovery and seminal developments in the CRISPR field

Mojica, F. J. M. & Garrett, Roger Antony, 2013, CRISPR-Cas Systems: RNA-mediated Adaptive Immunity in Bacteria and Archaea. Barrangou, R. & van der Oost, J. (eds.). Springer VS, p. 1-31 31 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Ecological function of aquatic mosses in Arctic lakes

Riis, T., Tagesen, B. K. & Christoffersen, Kirsten Seestern, 2013, Zackenberg Ecological Research Operations: 18^th Annual Report 2012. Jensen, L. M., Rasch, M. & Schmidt, N. M. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 98-99 2 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Freshwater Ecosystems

Wrona, F. J., Reist, J. D., Amundsen, P-A., Chambers, P. A., Christoffersen, K. S., Culp, J. M., Cenzo, P. D. D., Forsström, L., Hammar, J., Heino, J., Heikkinen, R. K., Kahilainen, K. K., Lesack, L., Lehtonen, H., Lento, J., Luoto, M., Marsh, P., Marcogliese, D. J., Moquin, P. A., Mustonen, T. & 9 others, Prowse, T. D., Power, M., Rautio, M., Swanson, H., Thompson, M., Toivonen, H., Vasiliev, V., Virkkala, R. & Zavalko, S., 2013, Arctic Biodiversity Assessment: status and trends in Arctic biodiversity. Meltofte, H. (ed.). Conservation of Arctic Flora and Fauna (CAFF), p. 335-377 43 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research › peer-review

Methods to assess high-resolution subsurface gas concentrations and gas fluxes in wetland ecosystems

Elberling, Bo, Kühl, Michael, Glud, R. N., Jørgensen, C. J., Jensen, L. A., Rickelt, L. F., Joensen, H. P., Larsen, M. & Møller, L. L. H., 2013, Methods in Biogeochemistry of Wetlands. DeLaune, R. D., Reddy, K. R., Richardson, C. J. & Megonigal, J. P. (eds.). Madison, USA: Soil Science Society of America Inc., p. 949-970 22 p. (Soil Science Society of America Book Series; No. 10).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Microorganisms (Microbes), Role of

Fenchel, Tom, 2013, Encyclopedia of Biodiversity. Levin, S. A. (ed.). Academic Press, p. 299-308 10 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Nanger (granti) Grant's Gazelle Species Group

Siegismund, Hans Redlef, Lorenzen, Eline & Arctander, P., 2013, Mammals of Africa: Pigs, Hippopotamuses, Chevrotain, Giraffes, Deer and Bovids. Kingdon, J. & Hoffmann, M. (eds.). London: Bloomsbury Academic, Vol. VI. p. 373–379 7 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Natural plant diversity development on a man-made dune system

Vestergaard, P., 2013, Restoration of Coastal Dunes. Martínez, M. L., Gallego-Fernández, J. B. & Hesp, P. A. (eds.). Heidelberg: Springer, p. 49-66 18 p. (Springer Series on Environmental Management; No. XIV).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Nutrient signaling and developmental timing of maturation

Danielsen, E. T., Møller, M. E. & Rewitz, Kim, 2013, Current topics in developmental biology: Developmental timing. Rougvie, A. E. & O'Connor, M. B. (eds.). Elsevier, Vol. 105. p. 37-67 31 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

On the accuracy of short read mapping

Menzel, K. P., Frellsen, J., Plass, M., Rasmussen, S. H. & Krogh, Anders, 2013, Deep Sequencing Data Analysis. Shomron, N. (ed.). Springer Science+Business Media, p. 39-59 21 p. (Methods in Molecular Biology, Vol. 1038).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Parallel GPGPU Evaluation of Small Angle X-ray Scattering Profiles in a Markov Chain Monte Carlo Framework

Antonov, L. D., Andreetta, C. & Hamelryck, Thomas Wim, 2013, Biomedical Engineering Systems and Technologies. Gabriel, J., Schier, J. & Huffel, S. V. (eds.). Springer Science+Business Media, Vol. 357. p. 222-235 14 p. (Communications in Computer and Information Science).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Saccharopepsin

Winther, Jakob R., Webb, H. & Kay, J., 2013, Handbook of Proteolytic Enzymes. Rawlings, N. D. & Salvesen, G. (eds.). Third Edition ed. Academic Press, Vol. 1. p. 128-133 6 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The Structure of the Central Side Chain is Crucial for Anoplin Hemolytic Activity

Munk, J., Thøgersen, L., Uggerhøj, L. E., Wimmer, R., Frimodt-Møller, N., Lindorff-Larsen, Kresten & Hansen, Paul Robert, 2013, Proceedings of the 23rd American Peptide Symposium. Lebl, M. (ed.). American Peptide Society

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

The crustacean integument: setae, scales, and other ornamentation

Garm, Anders Lydik & Watling, L., 2013, Functional Morphology & Diversity. Watling, L. & Theil, M. (eds.). Oxford University Press, p. 67-98 32 p. (The Natural History of the Crustacea, Vol. 1).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The effect of hypoxia on fish swimming performance and behaviour: swimming physiology of fish

Domenici, P., Herbert, N. A., Lefrançois, C., Steffensen, John Fleng & McKenzie, D., 2013, Swimming Physiology of Fish. Palstra, A. P. & Planas, J. V. (eds.). Springer Science+Business Media, p. 129-159 31 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Using the sediment archive of living dinoflagellate cysts and other protist resting stages to study temporal population dynamics

Ellegaard, Marianne, dos Santos Ribeiro, Sofia Isabel, Lundholm, Nina, Andersen, Thorbjørn Joest, Berge, T., Ekelund, Flemming, Härnström, K. & Godhe, A., 2013, Biological and geological perspectives of dinoflagellates. Lewis, J. M., Marret, F. & Bradley, L. R. (eds.). Geological Society, p. 149-153 5 p. (The Micropalaeontological Society, Special Publications, Vol. 5).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Why do we need a semiotic understanding of life?

Hoffmeyer, J., 2013, Beyond mechanism: putting life back into Biology. Henning, B. G. & Scarfe, A. C. (eds.). Lanham-Boulder-New York-Toronto-Plymouth, UK: Lexington Books, p. 148-169 22 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Winter campaign 2013

Schmidt, N. M., Forchhammer, M. C., Tamstorf, M. P., Michelsen, A. & Christoffersen, Kirsten Seestern, 2013, Zackenberg Ecological Research Operations: 18^th Annual Report 2012. Jensen, L. M., Rasch, M. & Schmidt, N. M. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 87-89 3 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Zackenberg Basic: The BioBasis programme

Hansen, L. H., Hansen, J., Christoffersen, Kirsten Seestern, Lund, M., Smedegaard Nielsen, P., Ulrik Christensen, M. & Schmidt, N. M., 2013, Zackenberg Ecological Research Operations: 18^th Annual Report 2012. Jensen, L. M., Rasch, M. & Schmidt, N. M. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 38-63 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Caloplaca magellanica sp. nova, a southern Patagonian parasite on Zahlbruchnerella

Søchting, Ulrik & Sancho, L. G., 2012, Systematics, biodiversity and ecology of lichens. E.Schweizerbart'sche Verlagsbuchhandlung, p. 215-220 6 p. (Bibliotheca Lichenologica, Vol. 108).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

An Overview of Bayesian Inference and Graphical Models

Hamelryck, Thomas Wim, 2012, Bayesian Methods in Structural Bioinformatics. Hamelryck, T., Mardia, K. & Ferkinghoff-Borg, J. (eds.). Springer, p. 3-48 46 p. (Statistics for Biology and Health, Springer).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

An invisible workforce: biofilms in the soil

Burmølle, Mette, Kjøller, Annelise Helene & Sørensen, Søren Johannes, 2012, Microbial biofilms: current research and applications. Lear, G. & Lewis, G. D. (eds.). Caister Academic Press, p. 61-71 11 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Analyzing temperature-induced transitions in disordered proteins by NMR spectroscopy and secondary chemical shift analyses

Kjærgaard, M., Poulsen, F. M. & Kragelund, Birthe Brandt, 2012, Intrinsically disordered protein analysis: methods and experimental tools. Uversky, V. N. & Dunker, A. K. (eds.). Springer, Vol. 2. p. 249-256 8 p. (Methods in Molecular Biology, Vol. 896).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Arthropod genomics and pest management targeting GPCRs: advanced technologies for managing insect pests

Grimmelikhuijzen, Cornelis (Cok) & Hauser, Frank, 2012, Advanced technologies for managing insect pests. Ishaaya, I., Palli, S. R. & Horowitz, A. R. (eds.). Springer Science+Business Media, p. 165-177 13 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Befolkningens opfattelse og økonomiske prioritering af biodiversitet

Thorsen, Bo Jellesmark, Strange, Niels & Rahbek, Carsten, 2012, Danmarks natur frem mod 2020: om at stoppe tabet af biologisk mangfoldighed. Meltofte, H. (ed.). Det Grønne Kontaktudvalg: Danmarks Naturfredningsforening, p. 19-22 4 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Biodiversiteten og velfærdsøkonomien

Thorsen, Bo Jellesmark & Rahbek, Carsten, 2012, Hvordan ser verden ud?: 73 bidrag om økonomi, institutioner og værdier: Professor Niels Kærgård 70 år. Andersen, P., Henriksen, I., Petersen, J. H. & Zobbe, H. (eds.). Djøf Forlag, p. 116-124 8 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

CRISPR/Cas and CRISPR/Cmr immune systems of archaea

Shah, S. A., Vestergaard, G. A. & Garrett, Roger Antony, 2012, Regulatory RNAs in prokaryotes. Springer, p. 163-181 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Comparative and functional genomics of anoxygenic green bacteria from the taxa Chlorobi, Chloroflexi, and Acidobacteria

Bryant, D. A., Liu, Z., Li, T., Zhao, F., Klatt, C. G., Ward, D. M., Frigaard, Niels-Ulrik & Overmann, J., 2012, Functional genomics and evolution of photosynthetic systems. Burnap, R. L. & Vermaas, W. F. J. (eds.). Springer, p. 47-102 56 p. (Advances in Photosynthesis and Respiration, Vol. 33).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler

Rahbek, Carsten, Agger, P. W., Bruun, Hans Henrik, Ejrnæs, R., Sand-Jensen, Kaj, Strange, Niels & Svenning, J., 2012, Danmarks natur frem mod 2020: om at stoppe tabet af biologisk mangfoldighed. Meltofte, H. (ed.). Det Grønne Kontaktudvalg: Danmarks Naturfredningsforening, p. 101-112 12 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Denmark: Occurence, Monitoring, and Management of Cyanobacteria and their Toxins in Danish Water Bodies

Christoffersen, Kirsten Seestern & Perlt, Trine Warming, 2012, Current approaches to Cyanotoxin risk assessment, risk management and regulations in different countries. Chorus, I. (ed.). Federal Environment Agency (Umweltbundesamt), p. 49-53 5 p. (Texte; No. 63/2012).

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Ecological function of aquatic mosses in Arctic lakes

Riis, T., Tagesen, B. K. & Christoffersen, Kirsten Seestern, 2012, Zackenberg Ecological Research Operations: 17th Annual Report 2011. Jensen, L. M. (ed.). Aarhus: Aarhus University, DCE – Danish Centre for Environment and Energy, p. 89-90 2 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Exploring folding pathways of single proteins using mechanical manipulation

Heiðarsson, P. O. & Cecconi, C., 2012, Theory and applications in computational chemistry: the first decade of the second millennium. Clementi, E., André, J-M. & McCammon, J. A. (eds.). American Institute of Physics, p. 201-206 6 p. (A I P Conference Proceedings, Vol. 1456).

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Hvordan sikrer man bedst omkostningseffektivitet i bevarelsen af biodiversitet?

Strange, Niels, Hasler, B., Termansen, M., Thorsen, Bo Jellesmark & Rahbek, Carsten, 2012, Danmarks natur frem mod 2020: om at stoppe tabet af biologisk mangfoldighed. Meltofte, H. (ed.). Det Grønne Kontaktudvalg: Danmarks Naturfredningsforening, p. 91-96 6 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Live cell microscopy of DNA damage response in Saccharomyces cerevisiae

Pinela da Silva, S. C., Gallina, I., Eckert-Boulet, N. V. & Lisby, Michael, 2012, DNA repair protocols. Springer Science+Business Media, p. 433-443 11 p. (Methods in Molecular Biology, Vol. 920).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Membrane transport in human skeletal muscle

Juel, C., 2012, Muscle biopsy. Sundaram, C. (ed.). InTech, 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

MicroRNAs and Their Antagonists as Novel Therapeutics

Vinther, Jeppe, Rukov, J. & Shomron, N., 2012, From Nucleic Acids Sequences to Molecular Medicine. Erdmann, V. A. & Barciszewski, J. (eds.). Springer Publishing Company, p. 503-523 21 p. (RNA Technologies).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

On the Physical Relevance and Statistical Interpretation of Knowledge-Based Potentials

Borg, M., Hamelryck, Thomas Wim & Ferkinghoff-Borg, J., 2012, Bayesian Methods in Structural Bioinformatics. Hamelryck, T., Mardia, K. & Ferkinghoff-Borg, J. (eds.). Springer Publishing Company, p. 97-124 28 p. (Statistics for Biology and Health, Springer).

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Plant waxes

von Wettstein, Penny, 2012, eLS: citable reviews in the life sciences. Wiley

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Probabilistic models of local biomolecular structure and their applications

Boomsma, Wouter, Frellsen, J. & Hamelryck, Thomas Wim, 2012, Bayesian methods in structural bioinformatics. Hamelryck, T., Mardia, K. & Ferkinghoff-Borg, J. (eds.). Springer, p. 233-254 22 p. (Statistics for Biology and Health, Springer).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Role of ion transport in control of apoptotic cell death

Lang, F. & Hoffmann, E. K., 2012, Comprehensive physiology. Wiley, p. 2037-2061 25 p. (Comprehensive Physiology; No. 3, Vol. 2).

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Seagrass and related submersed vascular plants

Borum, Jens, Gruber, R. K. & Kemp, W. M., 2012, Estuarine ecology. Day, J. W., Crump, B. C., Kemp, W. M. & Yáñez-Arancibia, A. (eds.). 2. ed. Wiley-Blackwell, p. 111-127 17 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Sodium-proton exchanger

Juel, C., 2012, Encyclopedia of exercise medicine in health and disease. Mooren, F. C. (ed.). Springer, p. 797-800 4 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Statistics of bivariate von mises distributions

Mardia, K. V. & Frellsen, J., 2012, Bayesian methods in structural bioinformatics. Hamelryck, T., Mardia, K. & Ferkinghoff-Borg, J. (eds.). Springer, p. 159-178 20 p. (Statistics for Biology and Health).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Temperature-induced transitions in disordered proteins probed by NMR spectroscopy

Kjærgaard, M., Poulsen, F. M. & Kragelund, Birthe Brandt, 2012, Intrinsically disordered protein analysis: methods and experimental tools. Uversky, V. N. & Dunker, A. K. (eds.). Springer, Vol. 2. p. 233-247 15 p. (Methods in Molecular Biology, Vol. 896).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

The marine tardigrades of Al Zubarah

Kristensen, Reinhardt Møbjerg, Persson, D. K., Møbjerg, Nadja & Jørgensen, Aslak, 2012, Qatar Islamic Archaeology and Heritage Project: End of Season Report Environmental Studies 2011-2012. Bangsgaard, P., Kristensen, R. M., Møller, P. R. & Nymann, H. (eds.). University of Copenhagen, p. 13-24 12 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

The natural history of intentionality: a biosemiotic approach

Hoffmeyer, J., 2012, The symbolic species evolved. Schilhab, T., Stjernfelt, F. & Deacon, T. (eds.). Springer Publishing Company, p. 97-116 20 p. (Biosemiotics; No. 6, Vol. 1).

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Three-spined stickleback Gasterosteus aculeatus L. recorded for the first time at Zackenberg – short description and comparative analysis with Arctic char food biology

Nielsen, A. B., Hamerlik, L. & Christoffersen, Kirsten Seestern, 2012, Zackenberg Ecological Research Operations: 17th Annual Report 2011. Jensen, L. M. (ed.). Aarhus: Aarhus University, DCE – Danish Centre for Environment and Energy, p. 92-95 4 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Towards a general probabilistic model of protein structure: the reference ratio method

Frellsen, J., Mardia, K. V., Borg, M., Ferkinghoff-Borg, J. & Hamelryck, Thomas Wim, 2012, Bayesian methods in structural bioinformatics. Hamelryck, T., Mardia, K. & Ferkinghoff-Borg, J. (eds.). Springer, p. 125-134 10 p. (Statistics for Biology and Health).

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Winter ecology of lakes

Christoffersen, Kirsten Seestern, 2012, Zackenberg Ecological Research Operations: 17th Annual Report 2011. Jensen, L. M. (ed.). Aarhus: Aarhus University, DCE – Danish Centre for Environment and Energy, p. 90-92 3 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Zackenberg Basic: The BioBasis programme

Hansen, L. H., Hansen, J., Christoffersen, Kirsten Seestern, Albert, K., Lund, M., Boulanger-Lapointe, N., Mortensen, L. O., Kyhn, L. A., Hansen, Eric Steen & Schmidt, N. M., 2012, Zackenberg Ecological Research Operations: 17th Annual Report 2011. Jensen, L. M. (ed.). Aarhus: Aarhus University, DCE – Danish Centre for Environment and Energy, p. 39-64 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Applicability of GFP microbial whole cell biosensors to bioreactor operations: mathematical modeling and related experimental tools

Delvigne, F., Brognaux, A., Gorret, N., Sørensen, Søren Johannes, Michel, C. & Thonart, P., Jul 2011, Biosensors - Emerging Materials and Applications. Serra, P. A. (ed.). Rijeka, Croatia: InTech, p. 601-630 30 p.

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The Biochemical Basis | Nucleotide Metabolism

Martinussen, J., Willemoës, Martin & Kilstrup, M., 20 Jan 2011, Comprehensive Biotechnology. . Moo-Young, M., Butler, M., Webb, C., Moreira, A., Grodzinski, B., Cui, Z. F. & Agathos, S. (eds.). 2 ed. Elsevier, Vol. 1. p. 91-107 17 p.

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Aggression og skader i klatrebure med fire ungdyr af mink

Jeppesen, L. L., 2011, Faglig Årsberetning 2010. Pelsdyrerhvervets Forsøgs- og ForskningsCenter, p. 7-16 10 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

Anaerobic eukaryotes

Fenchel, Tom, 2011, Anoxia: Evidence for Eukaryote Survival and Paleontological Strategies. Altenbach, A. V., Bernard, J. M. & Seckbach, J. (eds.). New York: Springer Publishing Company, p. 5-16 12 p. (Cellular Origin, Life in Extreme Habitats and Astrobiologuy).

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Arctic char in Zackenberg – growth and climate response

Nielsen, A. B. & Christoffersen, Kirsten Seestern, 2011, Zackenberg Ecological Research Operations: 16th Annual Report 2010. Jensen, L. M. & Rasch, M. (eds.). Aarhus: Aarhus University, DCE – Danish Centre for Environment and Energy, p. 91-92 2 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Astonishing life

Hoffmeyer, J., 2011, Semiotics continues to astonish: Thomas A. Sebeok and the doctrine of signs. Cobley, P., Deely, J., Kull, K. & Petrilli, S. (eds.). Berlin/Boston: Mouton de Gruyter, p. 191-206 16 p. (Semiotics, Communication and Cognition).

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Bacterial Ecology

Fenchel, Tom, 2011, Encyclopedia of Life Sciences. Wiley

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Biodiversity in aquatic systems of the tropical Andes

Maldonado, M., Maldonado-Campo, J., Ortega, H., Encalada, A., Carvajal-Vallejos, F., Rivadeneira, J., Acosta, F., Jacobsen, Dean, Crespo, A. & Rivera-Rondon, C., 2011, Climate change and biodiversity in the tropical Andes. Herzog, SK., Martinez, R., Jørgensen, PM. & Tiessen, H. (eds.). IAI - Inter-American Institute for Global Change Research, p. 276-294 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Biofilms in soil

Burmølle, Mette, Kjøller, Annelise Helene & Sørensen, Søren Johannes, 2011, Encyclopedia of agrophysics. Springer, p. 70-75 6 p. (Encyclopedia of Earth Sciences Series).

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Biology is immature biosemiotics

Hoffmeyer, J., 2011, Towards a semiotic biology: Life is the action of signs. Emmeche, C. & Kull, K. (eds.). 1 ed. London: Imperial College Press, Vol. 1. p. 43-65 22 p.

Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

Cell biology of homologous recombination in yeast

Eckert-Boulet, N. V., Rothstein, R. & Lisby, Michael, 2011, DNA recombination: methods and protocols. Tsubouchi, H. (ed.). Springer, p. 523-536 14 p. (Methods in Molecular Biology, Vol. 745).

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Efficient, non-disruptive local moves for Monte Carlo sampling of proteins

Bottaro, S., Boomsma, Wouter, Johansson, Kristoffer Enøe, Andreetta, C., Hamelryck, Thomas Wim & Ferkinghoff-Borg, J., 2011, Next Generation Statistics in Biosciences: Proceedings of the 30th Leeds Annual Statistical Research (LASR) Workshop. Mardia, K. V., Gusnanto, A., Riley, A. D. & Voss, J. (eds.). University of Leeds, p. 127 1 p.

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Isolation of RNP granules

Jønson, L., Nielsen, Finn Cilius & Christiansen, Jan, 2011, RNA: methods and protocols. Nielsen, H. (ed.). Springer, Vol. 703. p. 265-273 9 p. (Methods in Molecular Biology).

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MANA project

Bonnet, Philippe, Christoffersen, Kirsten Seestern & Chang, M., 2011, Zackenberg Ecological Research Operations: 16th Annual Report 2010. Jensen, L. M. & Rasch, M. (eds.). Aarhus University, DCE – Danish Centre for Environment and Energy, p. 93 1 p.

Research output: Chapter in Book/Report/Conference proceeding › Report chapter › Research

Microdissection of gonadal tissues for gene expression analyses

Jørgensen, A., Dalgaard, M. D. & Sonne, Si Brask, 2011, Laser capture microdissection: Methods and protocols. Murray, G. I. (ed.). Humana Press, Vol. 755. p. 307-13 7 p. (Methods in Molecular Biology).

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Nitrogen fixation rates in high-arctic dry heath and the influence of climate change and water additions

Sørensen, P. L., Skovgaard, M. S. & Michelsen, Anders, 2011, Zackenberg Ecological Research Operations: 16^th annual report 2010. Aarhus University, DCE – Danish Centre for Environment and Energy, p. 84 1 p.

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Phylum chrysophyta (Golden Algae)

Kristiansen, J. & Preisig, H. R., 2011, The freshwater algal flora of the British Isles: an identification guide to freshwater and terrestrial algae. John, D. M., Whitton, B. A. & Brook, A. J. (eds.). 2. ed. Cambridge: Cambridge University Press, p. 283-319 37 p.

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Reduced N cycling in response to elevated CO2, warming, and drought in a Danish heathland

Larsen, K. S., Andresen, L. C., Beier, C., Jonasson, S. E., Albert, K. R., Ambus, P. L., Arndal, M. F., Carter, M. S., Christensen, S., Holmstrup, M., Ibrom, A., Nielsen, J. K., van der Linden, L., Maraldo, K., Michelsen, A., Mikkelsen, T. N., Pilegaard, K., Priemé, A., Ro-Poulsen, H., Schmidt, I. K. & 2 others, Selsted, M. B. & Andersen, K. S., 2011, Nitrogen & global change: key findings - future challenges. 2 p.

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Small RNA target genes and regulatory connections in the Vibrio cholerae quorum sensing system

Hammer, B. K. & Svenningsen, Sine Lo, 2011, Quorum sensing: Methods and protocols. Rumbaugh, K. P. (ed.). Humana Press, Vol. 692. p. 189-206 18 p. (Methods in Molecular Biology).

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The post-transcriptional operon

Tenenbaum, S. A., Christiansen, Jan & Nielsen, Henrik, 2011, RNA: methods and protocols. Nielsen, H. (ed.). Springer, p. 237-245 9 p. (Methods in Molecular Biology).

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Theories of Signs and Meaning: Views from Copenhagen and Tartu

Hoffmeyer, J. & Kull, K., 2011, Towards a semiotic biology: Life is the action of signs. 1 ed. London: Imperial College Press, Vol. 1. p. 263-286 23 p.

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West Africa´s savannahs under change: integrated view on positive and negative effects of agriculture and land cover changes on carbon cycling and trace gas emission

Nacro, H. B., Struwe, Sten, Abbadie, L., Abekoe , K. M., Andersson, M., Attua, E. M., Badiane, A., Bilbao, B., Bonzi, M., Danso, S. K. A., Gignoux, J., Lensi , R., Khouma, M., Kjøller, Annelise Helene, Konaté, S., Manlay, M., Neill, C., Ouattara, B. & Tondoh, E. J., 2011, Africa and the Carbon Cycle: Proceedings of the Open Science Conference on “Africa and Carbon Cycle: the CarboAfrica project” : Accra (Ghana) 25-27 November 2008. Food and Agriculture Organization of the United Nations, p. 55-61 7 p. (Food and Agriculture Organization of the United Nations. World Soil Resources Reports; No. 105).

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Zackenberg Basic: The BioBasis programme

Hansen, J., Hansen, L. H., Christoffersen, Kirsten Seestern, Albert, K. R., Skovgaard, M. S., Bay, C., Kristensen, D. K., Berg, T. B., Lund, M., Boulanger-Lapointe, N., Sørensen, P. L., Christensen, M. U. & Schmidt, N. M., 2011, Zackenberg Ecological Research Operations: 16th Annual Report 2010. Jensen, L. M. & Rasch, M. (eds.). Aarhus: Aarhus University, DCE – Danish Centre for Environment and Energy, p. 43-66 24 p.

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Microbial disease in the sea: Effects of viruses on carbon and nutrient cycling

Middelboe, Mathias, 16 Dec 2010, Infectious Disease Ecology: Effects of Ecosystems on Disease and of Disease on Ecosystems. Princeton University Press, p. 242-259 18 p.

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A Biosemiotic Approach to Health

Hoffmeyer, J., 2010, Signifying Bodies.: Biosemiotics, Interaction, and Health. Cowley, S., Major, J., Steffensen, S. & Dini, A. (eds.). 1. ed. Portuguese Catholic University, Braga: The Faculty of Philosophy of Braga, Vol. 1. p. 21-41 21 p.

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