Department of Biology

 

 
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  1. 2021
  2. Published

    Personality-dependent inter- and intraspecific foraging competition in the invasive round goby, Neogobius melanostomus

    Ericsson, P., Persson, A., Behrens, J. W., Brodin, T., Hirsch, P. E., Sundelin, A., van Deurs, M., Winberg von Friesen, Lisa & Nilsson, P. A., 2021, In: Journal of Fish Biology. 98, 5, p. 1234-1241 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    A global perspective on the application of riverine macroinvertebrates as biological indicators in Africa, South-Central America, Mexico and Southern Asia

    Eriksen, T. E., Brittain, J. E., Søli, G., Jacobsen, Dean, Goethals, P. & Friberg, N., 2021, In: Ecological Indicators. 126, 17 p., 107609.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Ecological condition, biodiversity and major environmental challenges in a tropical river network in the Bago District in South-central Myanmar: First insights to the unknown

    Eriksen, T. E., Friberg, N., Brittain, J. E., Søli, G., Ballot, A., Årstein-Eriksen, E., Blakseth, T. A. & Veiteberg Braaten, H. F., 2021, In: Limnologica. 86, 12 p., 125835.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Binding Revisited - Avidity in Cellular Function and Signaling

    qrc243, qrc243 & Teilum, Kaare, 2021, In: Frontiers in Molecular Biosciences. 7, 13 p., 615565.

    Research output: Contribution to journal › Review › Research › peer-review

  6. Published

    Catalogue of lichens (and some related fungi) of Navarino Island, Cape Horn Biosphere Reserve, Chile

    Etayo, J., Sancho, L. G., Gómez-Bolea, A., Søchting, Ulrik, Aguirre, F. & Rozzi, R., 2021, In: Anales del Instituto de la Patagonia. 49, p. 1-110

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Wood Ash Application Reduces Bryophyte Cover and Changes Species Composition in a Norway Spruce (Picea abies) Plantation

    Ethelberg-Findsen, D., Rønn, Regin & Ekelund, Flemming, 2021, In: Forests. 12, 2, 14 p., 178.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Temporal and spatial dynamics of arthropod groups in terrestrial subsurface habitats in central Portugal

    Eusébio, R. P., Enghoff, Henrik, Solodovnikov, Alexey, Michelsen, Anders, Barranco, P., Salgado, J. M., Sendra, A. & Reboleira, Ana Sofia, 2021, In: Zoology. 147, 9 p., 125931.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    AutoCNV: a semiautomatic CNV interpretation system based on the 2019 ACMG/ClinGen Technical Standards for CNVs

    Fan, C., Wang, Z., Sun, Y., Sun, J., Liu, X., Kang, L., Xu, Y., Yang, M., Dai, W., Song, L., Wei, X., Xiang, J., Huang, H., Zhou, M., Zeng, F., Huang, L., Xu, Z. & Peng, Z., 2021, In: BMC Genomics. 22, 12 p., 721.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    The Clausena lansium (Wampee) genome reveal new insights into the carbazole alkaloids biosynthesis pathway

    Fan, Y., Sahu, S. K., Yang, T., Mu, W., Wei, J., Cheng, L., Yang, J., Liu, J., Zhao, Y., Lisby, Michael & Liu, Huan, 2021, In: Genomics. 113, 6, p. 3696-3704 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Metagenomic data mining: Benchmarking and developing technologies to identify biomarkers from large metagenomics data sets

    Fang, Chao, 2021, Department of Biology, Faculty of Science, University of Copenhagen. 96 p.

    Research output: Book/Report › Ph.D. thesis › Research

  12. Published

    Identification for Genetic Mechanism of Flightlessness in Penguins

    Fang, Q., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 243 p.

    Research output: Book/Report › Ph.D. thesis › Research

  13. Published

    Impact of Tellurite on the Metabolism of Paenibacillus pabuli AL109b With Flagellin Production Explaining High Reduction Capacity

    Farias, P., Francisco, R., Maccario, Lorrie, Herschend, J., Piedade, A. P., Sørensen, Søren Johannes & Morais, P. V., 2021, In: Frontiers in Microbiology. 12, 15 p., 718963.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Reducing the rate of psychiatric re-admissions in bipolar disorder using smartphones - The RADMIS trial

    Faurholt-Jepsen, M., Lindbjerg Tønning, M., Fros, M., Martiny, Klaus, Tuxen, N., Rosenberg, N., Busk, J., Winther, Ole, Thaysen-Petersen, D., Aamund, K. A., Tolderlund, L., Bardram, J. E. & Kessing, Lars Vedel, 2021, In: Acta Psychiatrica Scandinavica. 143, 5, p. 453-465 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Microbial community analysis of soils under different soybean cropping regimes in the Argentinean south-eastern Humid Pampas

    Fernandez-Gnecco, G., Smalla, K., Maccario, Lorrie, Sørensen, Søren Johannes, Barbieri, P., Consolo, V. F., Covacevich, F. & Babin, D., 2021, In: FEMS Microbiology Ecology. 97, 3, 14 p., fiab007.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Development and validation of new methods for measuring predation rates in mixoplanktonic protists

    Ferreira, G. D., Calbet, A., Mansour, J. S., Not, F., Medic, Nikola, Hansen, Per Juel, Romano, F., Pitta, P., Flynn, K. J. & Mitra, A., 2021, Novel Approaches For Investigating Marine Planktonic Mixotrophy. Mitra, A., Flynn, K. J., Anestis, K., Mansour, J. S., Ferreira, G. D. & Calbet, A. (eds.). Zenodo, 69 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  17. Published

    Mixoplankton interferences in dilution grazing experiments

    Ferreira, G. D., Romano, F., Medic, Nikola, Pitta, P., Hansen, Per Juel, Flynn, K. J., Mitra, A. & Calbet, A., 2021, In: Scientific Reports. 11, 16 p., 23849.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal

    Feuerborn, T. R., Carmagnini, A., Losey, R. J., Nomokonova, T., Askeyev, A., Askeyev, I., Askeyev, O., Antipina, E. E., Appelt, M., Bachura, O. P., Beglane, F., Bradley, D. G., Daly, K. G., Gopalakrishnan, S., Gregersen, K. M., Guo, C., Gusev, A. V., Jones, C., Kosintsev, P. A., Kuzmin, Y. V. & 17 others, Mattiangeli, V., Perri, A. R., Plekhanov, A. V., Ramos Madrigal, Jazmin, Schmidt, A. L., Shaymuratova, D., Smith, O., Yavorskaya, L. V., KU, thw266, Willerslev, Eske, Meldgaard, Morten, Gilbert, M Thomas P, Larson, G., Dalén, L., Hansen, Anders Johannes, Sinding, Mikkel Holger Strander & Frantz, L., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 39, e2100338118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Transcriptional Profiles Reveal Deregulation of Lipid Metabolism and Inflammatory Pathways in Neurons Exposed to Palmitic Acid

    Flores-León, M., Alcaraz, N., Pérez-Domínguez, M., Torres-Arciga, K., Rebollar-Vega, R., De la Rosa-Velázquez, I. A., Arriaga-Canon, C., Herrera, L. A., Arias, C. & González-Barrios, R., 2021, In: Molecular Neurobiology. 58, 9, p. 4639-4651 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Tumor Clearance and Immune Cell Recruitment in UV-Induced Murine Squamous Cell Carcinoma Exposed to Ablative Fractional Laser and Imiquimod Treatment

    Fontenete, S., Lerche, Catharina Margrethe, Paasch, U., Perez-Moreno, Mirna, Olesen, U. H. & Hædersdal, Merete, 2021, In: Lasers in Surgery and Medicine. 53, 9, p. 1227-1237 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    The genetic impact of an Ebola outbreak on a wild gorilla population

    Fontsere, C., Frandsen, P., Hernandez-Rodriguez, J., Niemann, Jonas, Scharff-Olsen, Camilla Hjorth, Vallet, D., Le Gouar, P., Ménard, N., Navarro, A., Siegismund, Hans Redlef, Hvilsom, C., Gilbert, M Thomas P, Kuhlwilm, M., Hughes, D. & Marques-Bonet, T., 2021, In: BMC Genomics. 22, 12 p., 735.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Effects of x-ray free-electron laser pulse intensity on the Mn Kβ1,3 x-ray emission spectrum in photosystem II-A case study for metalloprotein crystals and solutions

    Fransson, T., Alonso-Mori, R., Chatterjee, R., Cheah, M. H., Ibrahim, M., Hussein, R., Zhang, M., Fuller, F., Gul, S., Kim, I-S., Simon, P. S., Bogacz, I., Makita, H., De Lichtenberg, C., Song, S., Batyuk, A., Sokaras, D., Massad, R., Doyle, M., Britz, A. & 7 others, Weninger, C., Zouni, A., Messinger, J., Yachandra, V. K., Yano, J., Kern, J. & Bergmann, U., 2021, In: Structural Dynamics. 8, 6, 14 p., 064302.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Contingency and determinism in the evolution of bird song sound frequency

    Friis, J. I., Dabelsteen, Torben & Cardoso, G. C., 2021, In: Scientific Reports. 11, 9 p., 11600.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    The Allometry of Sound Frequency Bandwidth in Songbirds

    Friis, J. I., Sabino, J., Santos, P., Dabelsteen, Torben & Cardoso, G. C., 2021, In: American Naturalist. 197, 5, p. 607-614 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Activating the Cpx response induces tolerance to antisense PNA delivered by an arginine-rich peptide in Escherichia coli

    Frimodt-Møller, Jakob, Koulouktsis, A., Charbon, Godefroid, Otterlei, M., Nielsen, Peter E. & Løbner-Olesen, Anders, 2021, In: Molecular Therapy - Nucleic Acids. 25, p. 444-454 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Dimensions of invasiveness: Links between local abundance, geographic range size, and habitat breadth in Europe's alien and native floras

    Fristoe, T. S., Chytrý, M., Dawson, W., Essl, F., Heleno, R., Kreft, H., Maurel, N., Pergl, J., Pyšek, P., Seebens, H., Weigelt, P., Vargas, P., Yang, Q., Attorre, F., Bergmeier, E., Bernhardt-Römermann, M., Biurrun, I., Boch, S., Bonari, G., Botta-Dukát, Z. & 39 others, Bruun, Hans Henrik, Byun, C., Carni, A., Carranza, M. L., Catford, J. A., Cerabolini, B. E. L., Chacón-Madrigal, E., Ciccarelli, D., Cušterevska, R., De Ronde, I., Dengler, J., Golub, V., Haveman, R., Hough-Snee, N., Jandt, U., Jansen, F., Kuzemko, A., Küzmic, F., Lenoir, J., MacAnovic, A., Marcenò, C., Martin, A. R., Michaletz, S. T., Mori, A. S., Niinemets, Ü., Peterka, T., Pielech, R., Rašomavicius, V., Rusina, S., Dias, A. S., Sibíková, M., Silc, U., Stanisci, A., Jansen, S., Svenning, J., Swacha, G., Van Der Plas, F., Vassilev, K. & Van Kleunen, M., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 22, 11 p., e2021173118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Taxonomy based on limited genomic markers may underestimate species diversity of rockhopper penguins and threaten their conservation

    Frugone, M. J., Cole, T. L., López, M. E., Clucas, G., Matos-Maraví, P., Lois, N. A., Pistorius, P., Bonadonna, F., Trathan, P., Polanowski, A., Wienecke, B., Raya-Rey, A., Pütz, K., Steinfurth, A., Bi, K., Wang-Claypool, C. Y., Waters, J. M., Bowie, R. C. K., Poulin, E. & Vianna, J. A., 2021, In: Diversity and Distributions. 27, 11, p. 2277-2296 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    A comparison of tools for copy-number variation detection in germline whole exome and whole genome sequencing data

    Gabrielaite, M., Torp, M., Rasmussen, M., Andreu-Sánchez, S., Vieira, Filipe Garrett, Pedersen, C., Kinalis, S., Madsen, M., Yde, C., Rønn, O. L., Marvig, R., Østrup, O., Rossing, Caroline Maria, Nielsen, Finn Cilius, Winther, Ole & Bagger, F. O., 2021, bioRxiv, 29 p.

    Research output: Working paper › Preprint › Research

  29. Published

    A comparison of tools for copy-number variation detection in germline whole exome and whole genome sequencing data

    Gabrielaite, M., Torp, M. H., Rasmussen, Malthe Sebro, Andreu-Sánchez, S., Vieira, Filipe Garrett, Pedersen, C. B., Kinalis, S., Madsen, M. B., Kodama, M., Demircan, G. S., Simonyan, A., Yde, C. W., Olsen, L. R., Marvig, R. L., Østrup, O., Rossing, Caroline Maria, Nielsen, Finn Cilius, Winther, Ole & Bagger, F. O., 2021, In: Cancers. 13, 24, 6283.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    The initial inoculation ratio regulates bacterial coculture interactions and metabolic capacity

    Gao, C., Cao, H., Cai, P. & Sørensen, Søren Johannes, 2021, In: ISME Journal. 15, p. 29-40 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Comprehensive analysis of genetic and clinical characteristics of 30 patients with X-linked juvenile retinoschisis in China

    Gao, F., Dong, J., Wang, D., Chen, F., Hu, F., Chang, Q., Xu, P., Liu, W., Li, J., Huang, Y., Wu, J. & Xu, G., 2021, In: Acta Ophthalmologica. 99, 4, p. e470-e479 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Frequency and phenotypic characteristics of RPE65 mutations in the Chinese population

    Gao, F., Wang, D., Li, J., Hu, F., Xu, P., Chen, F., Qi, Y., Liu, W., Li, W., Zhang, S., Chang, Q., Xu, G. & Wu, J., 2021, In: Orphanet Journal of Rare Diseases. 16, 9 p., 174.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Prevalence and genetic-phenotypic characteristics of patients with USH2A mutations in a large cohort of Chinese patients with inherited retinal disease

    Gao, F., Wang, D., Chen, F., Sun, H., Hu, F., Xu, P., Li, J., Liu, W., Qi, Y., Li, W., Wang, M., Zhang, S., Xu, G., Chang, Q. & Wu, J., 2021, In: British Journal of Ophthalmology. 105, 1, p. 87-92 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The maternal gut microbiome during pregnancy and offspring allergy and asthma

    Gao, Y., Nanan, R., Macia, L., Tan, J., Sominsky, L., Quinn, T. P., O'Hely, M., Ponsonby, A., Tang, M. L. K., Collier, F., Strickland, D. H., Dhar, P., Brix, S., Phipps, S., Sly, P. D., Ranganathan, S., Stokholm, Jakob, Kristiansen, Karsten, Gray, L. E. K. & Vuillermin, P., 2021, In: Journal of Allergy and Clinical Immunology. 148, 3, p. 669-678

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Vicariance followed by secondary gene flow in a young gazelle species complex

    Garcia Erill, Genís, Kjær, M. M., Albrechtsen, Anders, Siegismund, Hans Redlef & Heller, Rasmus, 2021, In: Molecular Ecology. 30, 2, p. 528-544

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Evidence for large microbial-mediated losses of soil carbon under anthropogenic warming

    García-Palacios, P., Crowther, T. W., Dacal, M., Hartley, I. P., Reinsch, S., Rinnan, Riikka, Rousk, J., van den Hoogen, J., Ye, J. & Bradford, M. A., 2021, In: Nature Reviews Earth & Environment. 2, 7, p. 507-517

    Research output: Contribution to journal › Review › Research › peer-review

  37. Published

    Computational methods for chromosome-scale haplotype reconstruction

    Garg, S., 2021, In: Genome Biology. 22, 24 p., 101.

    Research output: Contribution to journal › Review › Research › peer-review

  38. Published

    Have the eyes of bioluminescent scale worms adapted to see their own light? A comparative study of eyes and vision in Harmothoe imbricata and Lepidonotus squamatus

    Garm, Anders Lydik, Simonsen, S. H., Mendoza-González, P. & Worsaae, Katrine, 2021, In: Journal of Experimental Biology. 224, 14, 10 p., jeb242501.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Geographical sampling bias on the assessment of endemism areas for marine meiobenthic fauna

    Garraffoni, A., Sørensen, Martin Vinther, Worsaae, Katrine, Di Domenico, M., Sales, L. P., Santos, J. & Lourenço, A., 2021, In: Cladistics. 37, 5, p. 571-585 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Haslea silbo, A Novel Cosmopolitan Species of Blue Diatoms

    Gastineau, R., Hansen, G., Poulin, M., Lemieux, C., Turmel, M., Bardeau, J-F., Leignel, V., Hardivillier, Y., Morançais, M., Fleurence, J., Gaudin, P., Méléder, V., Cox, E. J., Davidovich, N. A., Davidovich, O. I., Witkowski, A., Kaczmarska, I., Ehrman, J. M., Onís, E. S., Quintana, A. M. & 11 others, Mucko, M., Mordret, S., Sarno, D., Jacquette, B., Falaise, C., Séveno, J., Lindquist, N. L., Kemp, P. S., Eker-Develi, E., Konucu, M. & Mouget, J., 2021, In: Biology. 10, 4, 27 p., 328.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Light-Dependent Translation Change of Arabidopsis psbA Correlates with RNA Structure Alterations at the Translation Initiation Region

    Gawroński, P., Enroth, Christel Hougård, Kindgren, P., Marquardt, Sebastian, Karpiński, S., Leister, D., Jensen, Poul Erik, Vinther, Jeppe & Scharff, L. B., 2021, In: Cells. 10, 2, 22 p., 322.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Bsgatlas: A unified bacillus subtilis genome and transcriptome annotation atlas with enhanced information access

    Geissler, Adrian Sven, Anthon, Christian, Alkan, F., González-Tortuero, E., Poulsen, L. D., Kallehauge, T. B., Breüner, A., Seemann, Ernst Stefan, Vinther, Jeppe & Gorodkin, Jan, 2021, In: Microbial Genomics. 7, 2, 17 p., 000524.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Phylogeny Reveals Novel HipA-Homologous Kinase Families and Toxin-Antitoxin Gene Organizations

    Gerdes, K., Bærentsen, R. & Brodersen, D. E., 2021, In: mBio. 12, 3, 14 p., e01058-21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Variance in within-pair reproductive success influences the opportunity for selection annually and over the lifetimes of males in a multibrooded songbird

    Germain, Ryan Ross, Hallworth, M. T., Kaiser, S. A., Sillett, T. S. & Webster, M. S., 2021, In: Evolution. 75, 4, p. 915-930 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Mapping the degradation pathway of a disease-linked aspartoacylase variant

    Andersen, Sarah Gersing, Wang, Y., Grønbæk-Thygesen, Martin, Kampmeyer, Caroline, Bjørnkjær, Lene, Willemoës, Martin, Andréasson, C., Stein, Amelie, Lindorff-Larsen, Kresten & Hartmann-Petersen, Rasmus, 2021, In: PLOS Genetics. 17, 4, 28 p., e1009539.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Soil fungal diversity and functionality are driven by plant species used in phytoremediation

    Gil-Martínez, M., López-García, Á., Domínguez, M. T., Kjøller, Rasmus, Navarro-Fernández, C. M., Rosendahl, Søren & Marañón, T., 2021, In: Soil Biology and Biochemistry. 153, 12 p., 108102.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Expansion of the barnacle Austrominius modestus (Darwin, 1854) (Cirripedia, Thoracica, Balanidae) into Scandinavian waters based on collection data and niche distribution modeling

    Glenner, Henrik, Lützen, J., Pacheco-Riaño, L. C. & Noever, C., 2021, In: Aquatic Invasions. 16, 4, p. 675-689 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Frustule Photonics and Light Harvesting Strategies in Diatoms

    Goessling, J. W., Su, Y., Kühl, Michael & Ellegaard, Marianne, 2021, Diatom Morphogenesis. Wiley, p. 269-300 32 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  49. Published

    Network structure and the optimization of proximity‐based association criteria

    Gomes, A. C. R., Boogert, N. J. & Cardoso, G. C., 2021, In: Methods in Ecology and Evolution. 12, 1, p. 88-100

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Morphological convergence and adaptation in cave and pelagic scale worms (Polynoidae, Annelida)

    Gonzalez, B. C., Martínez, A., Worsaae, Katrine & Osborn, K. J., 2021, In: Scientific Reports. 11, 17 p., 10718.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Sunflower (Helianthus annuus) fatty acid synthase complex: β-Ketoacyl-[acyl carrier protein] reductase genes

    González-Thuillier, I., Venegas-Calerón, M., Moreno-Pérez, A. J., Salas, J. J., Garcés, R., von Wettstein, Penny & Martínez-Force, E., 2021, In: Plant Physiology and Biochemistry. 166, p. 689-699 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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