- 2021
- Published
Agricultural land use curbs exotic invasion but sustains native plant diversity at intermediate levels
Pellegrini, Elisa, Buccheri, M., Martini, F. & Boscutti, F., 2021, In: Scientific Reports. 11, 10 p., 8385.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Algae Genome Studies Reveal the Evolutionary History of Green Plants
Wang, S., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 134 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Alternatives to Student Outbound Mobility—Improving Students’ Cultural Competency Skills Online to Improve Global Health Without Travel
Wu, A., Maddula, V., Singh, J., Sagoo, M. G., Chien, C. L., Wingate, R., Kielstein, H., Traxler, H., Brassett, C., Waschke, J., Vielmuth, F., Sakurai, T., Zeroual, M., Olsen, J., El-Batti, S., Viranta-Kovanen, S., Kitahara, S., Keay, K., Kunzel, C., Bernd, P. & 1 others, , 2021, In: Medical Science Educator. 31, 4, p. 1441-1451Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Expanded Gene Catalog of Mouse Gut Metagenomes
Zhu, J., Ren, H., Zhong, H., Li, Xiaoping, Zou, Y., Han, Mo, Li, M., Madsen, L., Kristiansen, Karsten & Xiao, L., 2021, In: mSphere. 6, 1, 12 p., e-01119-20.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An automatic classification algorithm for submerged aquatic vegetation in shallow lakes using Landsat imagery
Dai, Y., Feng, L., Hou, X. & Tang, Jing, 2021, In: Remote Sensing of Environment. 260, 15 p., 112459.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An efficient pipeline for ancient DNA mapping and recovery of endogenous ancient DNA from whole-genome sequencing data
Xu, W., Lin, Y., Zhao, K., Li, H., Tian, Y., Ngatia, J. N., Ma, Y., Sahu, S. K., Guo, H., Guo, X., Xu, Y. C., Liu, Huan, Kristiansen, Karsten, Lan, T. & Zhou, X., 2021, In: Ecology and Evolution. 11, 1, p. 390-401 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An evolutionary genomics view on neuropeptide genes in Hydrozoa and Endocnidozoa (Myxozoa)
Koch, Thomas Lund, Hauser, Frank & Grimmelikhuijzen, Cornelis (Cok), 2021, In: BMC Genomics. 22, 22 p., 862.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An exploratory investigation of glucocorticoids, personality and survival rates in wild and rehabilitated hedgehogs (Erinaceus europaeus) in Denmark
Rasmussen, S. L., Kalliokoski, Otto, Dabelsteen, Torben & Abelson, Klas, 2021, In: BMC Ecology and Evolution. 21, 16 p., 96.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms
Alanin, K. W. S., Jørgensen, T. S., Browne, Patrick Denis, Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Plasmid. 115, 11 p., 102576.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An integrated gene catalog and over 10,000 metagenome-assembled genomes from the gastrointestinal microbiome of ruminants
Xie, F., Jin, W., Si, H., Yuan, Y., Tao, Y., Liu, J., Wang, X., Yang, C., Li, Q., Yan, X., Lin, L., Jiang, Q., Zhang, L., Guo, C., Greening, C., Heller, R., Guan, L. L., Pope, P. B., Tan, Z., Zhu, W. & 4 others, , 2021, In: Microbiome. 9, 20 p., 137.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An under‑ice bloom of mixotrophic haptophytes in low nutrient and freshwater‑influenced Arctic waters
Søgaard, D. H., Sorrell, B. K., Sejr, M. K., Andersen, P., Rysgaard, S., Hansen, Per Juel, Skyttä, A., Lemcke, S. & Lund-Hansen, L. C., 2021, In: Scientific Reports. 11, 8 p., 11:2915.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancestral developmental potentials in early bony fish contributed to vertebrate water-to-land transition
Bi, X. & KU, thw266, 2021, In: Zoological research. 42, 2, p. 135-137 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient DNA from bulk bone reveals past genetic diversity of vertebrate fauna on Kangaroo Island, Australia
Seersholm, Frederik Valeur, Grealy, A., McDowell, M. C., Cole, T. L., Arnold, L. J., Prideaux, G. J. & Bunce, M., 2021, In: Quaternary Science Reviews. 262, 9 p., 106962.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient and modern genomes unravel the evolutionary history of the rhinoceros family
Liu, S., Westbury, M. V., Dussex, N., Mitchell, K. J., Sinding, M. H. S., Heintzman, P. D., Duchêne, D. A., Kapp, J. D., von Seth, J., Heiniger, H., Sánchez-Barreiro, F., Margaryan, A., André-Olsen, R., De Cahsan, B., Meng, G., Yang, C., Chen, L., van der Valk, T., Moodley, Y., Rookmaaker, K. & 19 others, , 2021, In: Cell. 184, 19, p. 4874-4885.e16Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Antibiotic Tolerance and Persistence Studied Throughout Bacterial Growth Phases
Maffei, E., Fino, C. & Harms, A., 2021, Bacterial Persistence: Methods and Protocols. Verstraeten, N. & Michiels, J. (eds.). 2. ed. ed. Humana Press, p. 23-40 18 p. (Methods in Molecular Biology, Vol. 2357).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Antimicrobial Activity of Metals and Metalloids
Li, Y. P., Fekih, I. B., Fru, E. C., Moraleda-Munoz, A., Li, Xuan Ji, Rosen, B. P., Yoshinaga, M. & Rensing, C., 2021, In: Annual Review of Microbiology. 75, 23 p., 9.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Antisense inhibition of the Escherichia coli NrdAB aerobic ribonucleotide reductase is bactericidal due to induction of DNA strand breaks
Campion, C., Charbon, Godefroid, Thomsen, T. T., Nielsen, Peter E. & Løbner-Olesen, Anders, 2021, In: Journal of Antimicrobial Chemotherapy. 76, 11, p. 2802–2814 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, Regin, Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Aquatic biota responses to temperature in a high Andean geothermal stream
Quenta-Herrera, E., Daza, A., Lazzaro, X., Jacobsen, Dean, Dangles, O. & Cauvy-Fraunié, S., 2021, In: Freshwater Biology. 66, 10, p. 1889-1900 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Architecture and assembly dynamics of the essential mitochondrial chaperone complex TIM9·10·12
Weinhäupl, K., Wang, Yong, Hessel, A., Brennich, M., Lindorff-Larsen, Kresten & Schanda, P., 2021, In: Structure. 29, 9, p. 1065-1073.e4Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arginine-vasopressin mediates counter-regulatory glucagon release and is diminished in type 1 diabetes
Kim, A., Knudsen, J. G., Madara, J. C., Benrick, A., Hill, T. G., Kadir, L. A., Kellard, J. A., Mellander, L., Miranda, C., Lin, H., James, T., Suba, K., Spigelman, A. F., Wu, Y., Macdonald, P. E., Asterholm, I. W., Magnussen, T., Christensen, M., Vilsbøll, T., Salem, V. & 4 others, , 2021, In: eLife. 10, 29 p., e72919.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arresting chromosome replication upon energy starvation in Escherichia coli
Charbon, Godefroid, Frimodt-Møller, Jakob & Løbner-Olesen, Anders, 2021, In: Current Genetics. 67, 6, p. 877-882 6 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Artificial neural network (ANN) modelling for the estimation of soil microbial biomass in vineyard soils
Pellegrini, Elisa, Rovere, N., Zaninotti, S., Franco, I., De Nobili, M. & Contin, M., 2021, In: Biology and Fertility of Soils. 57, 1, p. 145-151 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Atmospheric brightening counteracts warming-induced delays in autumn phenology of temperate trees in Europe
Wu, Z., Chen, S., De Boeck, H. J., Stenseth, N. C., Tang, Jing, Vitasse, Y., Wang, S., Zohner, C. & Fu, Y. H., 2021, In: Global Ecology and Biogeography. 30, 12, p. 2477-2487 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
August Krogh's contribution to the rise of physiology during the first half the 20th century
Larsen, Erik Hviid, Hoffmann, E., Hedrick, M. S. & Wang, T., 2021, In: Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology. 256, 7 p., 110931.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
AutoCNV: a semiautomatic CNV interpretation system based on the 2019 ACMG/ClinGen Technical Standards for CNVs
Fan, C., Wang, Z., Sun, Y., Sun, J., Liu, X., Kang, L., Xu, Y., Yang, M., Dai, W., Song, L., Wei, X., Xiang, J., Huang, H., Zhou, M., Zeng, F., Huang, L., Xu, Z. & Peng, Z., 2021, In: BMC Genomics. 22, 12 p., 721.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacteria Respond Stronger Than Fungi Across a Steep Wood Ash-Driven pH Gradient
Cruz-Paredes, C., Bang-Andreasen, T., Christensen, Søren, Ekelund, Flemming, Frøslev, Tobias Guldberg, Jacobsen, C. S., Johansen, Jesper Liengaard, Mortensen, Louise Hindborg, Rønn, Regin, Vestergård, M. & Kjøller, Rasmus, 2021, In: Frontiers in Forests and Global Change. 4, 10 p., 781844.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021
Krupovic, M., Turner, D., Morozova, V., Dyall-Smith, M., Oksanen, H. M., Edwards, R., Dutilh, B. E., Lehman, S. M., Reyes, A., Baquero, D. P., Sullivan, M. B., Uchiyama, J., Nakavuma, J., Barylski, J., Young, M. J., Du, S., Alfenas-Zerbini, P., Kushkina, A., Kropinski, A. M., Kurtböke, I. & 29 others, , 2021, In: Archives of Virology. 166, 11, p. 3239-3244 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial chromosomal mobility via lateral transduction exceeds that of classical mobile genetic elements
Humphrey, S., Fillol-Salom, A., Quiles-Puchalt, N., Ibarra Chavez, Rodrigo, Haag, A. F., Chen, J. & Penadés, J. R., 2021, In: Nature Communications. 12, 13 p., 6509.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacteriophage Resistance Affects Flavobacterium columnare Virulence Partly via Mutations in Genes Related to Gliding Motility and the Type IX Secretion System
Kunttu, H. M. T., Runtuvuori-Salmela, A., Sundell, K., Wiklund, T., Middelboe, Mathias, Landor, L., Ashrafi, R., Hoikkala, V. & Sundberg, L., 2021, In: Applied and Environmental Microbiology. 87, 16, 19 p., e00812-21 .Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Baleen whale prey consumption based on high-resolution foraging measurements
Savoca, M. S., Czapanskiy, M. F., Kahane-Rapport, S. R., Gough, W. T., Fahlbusch, J. A., Bierlich, K. C., Segre, P. S., drf168, drf168, Penry, G. S., Wiley, D. N., Calambokidis, J., Nowacek, D. P., Johnston, D. W., Pyenson, N. D., Friedlaender, A. S., Hazen, E. L. & Goldbogen, J. A., 2021, In: Nature. 599, 7883, p. 85-90 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Benchmarking blockchain-based gene-drug interaction data sharing methods: A case study from the iDASH 2019 secure genome analysis competition blockchain track
Kuo, T., Bath, T., Ma, S., Pattengale, N., YANG, Meng, Cao, Y., Hudson, C. M., Kim, J., Post, K., Xiong, L. & Ohno-Machado, L., 2021, In: International Journal of Medical Informatics. 154, 8 p., 104559.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Benchmarking plant diversity of Palaearctic grasslands and other open habitats
Biurrun, I., Pielech, R., Dembicz, I., Gillet, F., Kozub, Ł., Marcenò, C., Reitalu, T., Van Meerbeek, K., Guarino, R., Chytrý, M., Pakeman, R. J., Preislerová, Z., Axmanová, I., Burrascano, S., Bartha, S., Boch, S., Bruun, H. H., Conradi, T., De Frenne, P., Essl, F. & 203 others, , 2021, In: Journal of Vegetation Science. 32, 4, 21 p., e13050.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bending during seedling emergence: Mechanochemical insight
Bai, B., 2021, In: Trends in Plant Science. 26, 9, p. 879-881 3 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Betydningen af byggeriet af ”Fælledby” for biodiversiteten på Amager Fælled
Ejrnæs, R. & Bruun, Hans Henrik, 2021, Kalø: Aarhus Universitet. 7 p. (Fagligt notat; No. 25, Vol. 2021).Research output: Book/Report › Report › Commissioned › peer-review
- Published
Bidirectional exchange of biogenic volatile organic compounds between subarctic heath tundra and the atmosphere
Baggesen, N. S., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 202 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Binding Revisited - Avidity in Cellular Function and Signaling
qrc243, qrc243 & Teilum, Kaare, 2021, In: Frontiers in Molecular Biosciences. 7, 13 p., 615565.Research output: Contribution to journal › Review › Research › peer-review
- Published
Binding Sites for Oligosaccharide Repeats from Lactic Acid Bacteria Exopolysaccharides on Bovine β-Lactoglobulin Identified by NMR Spectroscopy
Birch, J., Khan, S., Madsen, M., Kjeldsen, C., Møller, M. S., Stender, E. G. P., Peters, G. H. J., Duus, J. Ø., Kragelund, Birthe Brandt & Svensson, B., 2021, In: ACS Omega. 6, 13, p. 9039-9052 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bioactive Ascochlorin Analogues from the Marine-Derived Fungus Stilbella fimetaria
Subko, K., Kildgaard, S., Vicente, F., Reyes, F., Genilloud, O. & Larsen, T. O., 2021, In: Marine Drugs. 19, 2, 12 p., 46.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biofilms can act as plasmid reserves in the absence of plasmid specific selection
Røder, Henriette Lyng, Trivedi, Urvish, Russel, J., Kragh, K. N., Herschend, J., Thalsø-Madsen, I., Tolker-Nielsen, Tim, Bjarnsholt, Thomas, Burmølle, Mette & Madsen, Jonas Stenløkke, 2021, In: npj Biofilms and Microbiomes. 7, 6 p., 78.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Break-up of lake ice in the Arctic: strong linkage to mean summer temperature
Christoffersen, Kirsten Seestern, Raundrup, K. & Lauridsen, T. L., 2021, Greenland Ecosystem Monitoring Annual Report Cards 2020. Christensen, T. R., Arndal, M. F. & Topp-Jørgensen, E. (eds.). Aarhus University, DCE - Danish Centre for Environment and Energy, p. 14-15Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research
- Published
Bregner: sjældent spændende
Sand-Jensen, Kaj & Schou, J. C., 2021, In: URT. 3, p. 6-13 7 p.Research output: Contribution to journal › Journal article › Communication
- Published
Broad Dissemination of Plasmids across Groundwater-Fed Rapid Sand Filter Microbiomes
Pinilla Redondo, Rafael, Olesen, Asmus Kalckar, Russel, J., de Vries, L. E., Christensen, L. D., Musovic, S., Nesme, Joseph & Sørensen, Søren Johannes, 2021, In: mBio. 12, 6, 13 p., e0306821.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bsgatlas: A unified bacillus subtilis genome and transcriptome annotation atlas with enhanced information access
Geissler, Adrian Sven, Anthon, Christian, Alkan, F., González-Tortuero, E., Poulsen, L. D., Kallehauge, T. B., Breüner, A., Seemann, Ernst Stefan, Vinther, Jeppe & Gorodkin, Jan, 2021, In: Microbial Genomics. 7, 2, 17 p., 000524.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Buffering effects of soil seed banks on plant community composition in response to land use and climate
Plue, J., Van Calster, H., Auestad, I., Basto, S., Bekker, R. M., Bruun, H. H., Chevalier, R., Decocq, G., Grandin, U., Hermy, M., Jacquemyn, H., Jakobsson, A., Jankowska-Błaszczuk, M., Kalamees, R., Koch, M. A., Marrs, R. H., Marteinsdóttir, B., Milberg, P., Måren, I. E., Pakeman, R. J. & 5 others, , 2021, In: Global Ecology and Biogeography. 30, 1, p. 128-139 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CDX2 regulates interleukin-33 gene expression in intestinal epithelial cells (LS174T)
Larsen, S., Seidelin, Jakob Benedict, Davidsen, J., Dahlgaard, K., Nielsen, Claus Henrik, Bennett, Eric Paul, Pedersen, O. B., Coskun, M. & Troelsen, J. T., 2021, In: FEBS Open Bio. 11, 6, p. 1638-1644Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CEP78 functions downstream of CEP350 to control biogenesis of primary cilia by negatively regulating CP110 levels
Gonçalves, A. B., Hasselbalch, S. K., Joensen, B. B., Patzke, S., Martens, P., Ohlsen, S. K., Quinodoz, M., Nikopoulos, K., Suleiman, R., Jeppesen, M. P. D., Weiss, C., Christensen, Søren Tvorup, Rivolta, C., Andersen, J. S., Farinelli, P. & Pedersen, Lotte Bang, 2021, In: eLife. 10, 34 p., e63731.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
CGRP-dependent signalling pathways involved in mouse models of GTN- cilostazol- and levcromakalim-induced migraine
Christensen, S. L., Rasmussen, R. H., Ernstsen, C., La Cour, S., David, A., Chaker, J., Haanes, K. A., Christensen, Søren Tvorup, Olesen, Jes & Kristensen, D. M., 2021, In: Cephalalgia. 41, 14, p. 1413-1426 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
COVID-19 drug practices risk antimicrobial resistance evolution
MetaSUB Consortium, M. C., 2021, In: The Lancet Microbe. 2, 4, p. e135-e136Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Calmodulin downregulation in conditional knockout HeLa cells inhibits cell migration
Alcalde, J., Munk, M., González-Muñoz, M., Panina, S., Berchtold, Martin Werner & Villalobo, A., 2021, In: Archives of Biochemistry and Biophysics. 697, 9 p., 108680.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Carbon cycling in freshwater ecosystems — from pond to stream network
Martinsen, Kenneth Thorø, 2021, Department of Biology, Faculty of Science, University of Copenhagen. 120 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Cardiovascular autonomic neuropathy and the impact on progression of diabetic kidney disease in type 1 diabetes
Bjerre-Christensen, T., Winther, S. A., Tofte, N., Theilade, S., Ahluwalia, Tarun Veer Singh, Lajer, M., Hansen, T. W., Rossing, Peter & Hansen, C. S., 2021, In: B M J Open Diabetes Research & Care. 9, 1, 9 p., e002289.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Caste-specific recognition patterns in a fungus-growing termite
Bos, N. & van Zweden, J. S., 2021, In: Animal Behaviour. 182, p. 125-133 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Catalogue of lichens (and some related fungi) of Navarino Island, Cape Horn Biosphere Reserve, Chile
Etayo, J., Sancho, L. G., Gómez-Bolea, A., Søchting, Ulrik, Aguirre, F. & Rozzi, R., 2021, In: Anales del Instituto de la Patagonia. 49, p. 1-110Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Century-long records reveal shifting challenges to seagrass recovery
Krause-Jensen, D., Duarte, C. M., Sand-Jensen, Kaj & Carstensen, J., 2021, In: Global Change Biology. 27, 3, p. 563-575 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cervicovaginal microbiome dynamics after taking oral probiotics
Chen, Chen, Hao, L., Zhang, Z., Tian, L., Zhang, X., Zhu, J., Jie, Zhuye, Tong, X., Xiao, L., Zhang, T., Jin, X., Xu, X., Yang, H., Wang, J., Kristiansen, Karsten & Jia, H., 2021, In: Journal of Genetics and Genomics. 48, 8, p. 716-726 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization and description of Faecalibacterium butyricigenerans sp. nov. and F. longum sp. nov., isolated from human faeces
Zou, Y., Lin, X., Xue, W., Tuo, L., Chen, M., Chen, X., Sun, C., Li, F., Liu, S., Dai, Y., Kristiansen, Karsten & Xiao, L., 2021, In: Scientific Reports. 11, 13 p., 11340.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of an archaeal virus replication initiator protein and first insights into virus assembly of spindle-shaped virus SMV1
Zhang, W., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 140 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Characterization of genomic clones by targeted deep sequencing of ctDNA to monitor liver cancer
Sun, Y., Kong, X., Yu, J., Zheng, X., Lin, M., Cheng, Z., Wang, H., An, N., Xie, Y., Zeng, S., Xue, S., Xia, M., Wei, X., Song, L., Liu, F., Fan, C., Fang, Z., Gao, L., Yang, Y., Zhu, S. & 1 others, , 2021, In: Translational Cancer Research. 10, 10, p. 4387-4402 24 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patients
Zhong, H., Wang, Y., Shi, Z., Zhang, L., Ren, H., He, W., Zhang, Z., Zhu, A., Zhao, J., Xiao, F., Yang, F., Liang, T., Ye, F., Zhong, B., Ruan, S., Gan, M., Zhu, J., Li, F., Li, F., Wang, D. & 13 others, , 2021, In: Cell Discovery. 7, 14 p., 23.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of the human skin resistome and identification of two microbiota cutotypes
Li, Z., Xia, J., Jiang, L., Tan, Y., An, Y., Zhu, X., Ruan, J., Chen, Z., Zhen, H., Ma, Y., Jie, Z., Xiao, L., Yang, H., Wang, J., Kristiansen, K., Xu, X., Jin, L., Nie, C., Krutmann, J., Liu, X. & 1 others, , 2021, In: Microbiome. 9, 18 p., 47.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterizing Conformational Changes of ASIC1a During Gating and Peptide Modulation
Heusser, Stephanie, Sheikh, Zeshan Pervez, Borg, C. B., Galleano, I. & Pless, Stephan, 2021, p. 337A-337A.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Charge Engineering Reveals the Roles of Ionizable Side Chains in Electrospray Ionization Mass Spectrometry
Abramsson, M. L., Sahin, C., Hopper, J. T. S., Branca, R. M. M., Danielsson, J., Xu, M., Chandler, S. A., Österlund, N., Ilag, L. L., Leppert, A., Costeira-Paulo, J., Lang, L., Teilum, K., Laganowsky, A., Benesch, J. L. P., Oliveberg, M., Robinson, C. V., Marklund, E. G., Allison, T. M., Winther, J. R. & 1 others, , 2021, In: JACS Au. 1, 12, p. 2385-2393 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Charge Interactions in a Highly Charge-Depleted Protein
Hervø-Hansen, S., Højgaard, C., Johansson, Kristoffer Enøe, Wang, Yong, Wahni, K., Young, D., Messens, J., Teilum, Kaare, Lindorff-Larsen, Kresten & Winther, Jakob R., 2021, In: Journal of the American Chemical Society. 143, 6, p. 2500-2508 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chlorophyll-a concentrations in 82 large alpine lakes on the Tibetan Plateau during 2003–2017: temporal–spatial variations and influencing factors
Pi, X., Feng, L., Li, W., Liu, J., Kuang, X., Shi, K., Qi, W., Chen, D. & Tang, Jing, 2021, In: International Journal of Digital Earth. 14, 6, p. 714-735 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Chromosome-scale genomes provide new insights into subspecies divergence and evolutionary characteristics of the giant panda
Guang, X., Lan, T., Wan, Q. H., Huang, Y., Li, H., Zhang, M., Li, R., Zhang, Z., Lei, Y., Zhang, L., Zhang, H., Li, D., Li, X., Li, H., Xu, Y., Qiao, M., Wu, D., Tang, K., Zhao, P., Lin, J-Q. & 11 others, , 2021, In: Science Bulletin. 66, 19, p. 2002-2013 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Circulating Free Fatty Acid and Phospholipid Signature Predicts Early Rapid Kidney Function Decline in Patients With Type 1 Diabetes
Afshinnia, F., Rajendiran, T. M., He, C., Byun, J., Montemayor, D., Darshi, M., Tumova, J., Kim, J., Limonte, C. P., Miller, R. G., Costacou, T., Orchard, T. J., Ahluwalia, Tarun Veer Singh, Rossing, Peter, Snell-Bergeon, J. K., de Boer, I. H., Natarajan, L., Michailidis, G., Sharma, K. & Pennathur, S., 2021, In: Diabetes Care. 44, 9, p. 2098-2106 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Co-occurrence of contaminants in marine fish from the North East Atlantic Ocean: Implications for human risk assessment
Ho, Q. T., Bank, M. S., Azad, A. M., Nilsen, B. M., Frantzen, S., Boitsov, S., Maage, A., Kögel, T., Sanden, M., Frøyland, L., Hannisdal, R., Hove, H., Lundebye, A. K., Nøstbakken, O. J. & Madsen, L., 2021, In: Environment International. 157, 13 p., 106858.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Co-option of immune effectors by the hormonal signalling system triggering metamorphosis in Drosophila melanogaster
Nunes, C., Koyama, Takashi & Sucena, É., 2021, In: PLOS Genetics. 17, 11, 24 p., e1009916.Research output: Contribution to journal › Journal article › Research › peer-review
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Co-selection of antibiotic resistance genes, and mobile genetic elements in the presence of heavy metals in poultry farm environments
Mazhar, S. H., Li, Xuan Ji, Rashid, A., Su, J., Xu, J., Brejnrod, A. D., Su, J., Wu, Y., Zhu, Y., Zhou, S. G., Feng, R. & Rensing, C., 2021, In: Science of the Total Environment. 755, Part 2, 10 p., 142702.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combining Bayesian age models and genetics to investigate population dynamics and extinction of the last mammoths in northern Siberia
Dehasque, M., Chrzanová Pecnerová, Patrícia, Muller, H., Tikhonov, A., Nikolskiy, P., Tsigankova, V. I., Danilov, G. K., Díez-del-Molino, D., Vartanyan, S., Dalén, L. & Lister, A. M., 2021, In: Quaternary Science Reviews. 259, 10 p., 106913.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Commercially available kelp and seaweed products – valuable iodine source or risk of excess intake?
Aakre, I., Solli, D. D., Markhus, M. W., Mæhre, H. K., Dahl, L., Henjum, S., Alexander, J., Korneliussen, P., Madsen, L. & Kjellevold, M., 2021, In: Food & Nutrition Research. 65, 17 p., 7584.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Community-wide changes reflecting bacterial interspecific interactions in multispecies biofilms
Sadiq, F. A., Burmølle, Mette, Heyndrickx, M., Flint, S., Lu, W., Chen, W., Zhao, J. & Zhang, H., 2021, In: Critical Reviews in Microbiology. 47, 3, p. 338-358 21 p.Research output: Contribution to journal › Review › Research › peer-review
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Comparative Genomic Analyses of Flavobacterium psychrophilum Isolates Reveals New Putative Genetic Determinants of Virulence Traits
Castillo, D., Donati, V. L., Jørgensen, J., Sundell, K., Dalsgaard, I., Madsen, L., Wiklund, T. & Middelboe, Mathias, 2021, In: Microorganisms. 9, 8, 15 p., 1658.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative Genomic and Metabolic Analysis of Streptomyces sp. RB110 Morphotypes Illuminates Genomic Rearrangements and Formation of a New 46-Membered Antimicrobial Macrolide
Um, S., Guo, H., Thiengmag, S., Benndorf, R., Murphy, Rob, Rischer, M., Braga, D., Poulsen, Michael, de Beer, Z. W., Lackner, G. & Beemelmanns, C., 2021, In: ACS chemical biology. 16, 8, p. 1482-1492Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative Genomics Analysis of Keratin-Degrading Chryseobacterium Species Reveals Their Keratinolytic Potential for Secondary Metabolite Production
Kang, D., Shoaie, S., Jacquiod, S., Sørensen, Søren Johannes & Ledesma-Amaro, R., 2021, In: Microorganisms. 9, 5, 15 p., 1042.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative Genomics of Novel Agrobacterium G3 Strains Isolated From the International Space Station and Description of Agrobacterium tomkonis sp. nov.
Singh, N. K., Lavire, C., Nesme, Joseph, Vial, L., Nesme, X., Mason, C. E., Lassalle, F. & Venkateswaran, K., 2021, In: Frontiers in Microbiology. 12, 15 p., 765943.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative analysis of the alveolar microbiome in COPD, ECOPD, Sarcoidosis, and ILD patients to identify respiratory illnesses specific microbial signatures
Gupta, S., Shariff, M., Chaturvedi, G., Sharma, A., Goel, N., Yadav, M., Mortensen, M. S., Sørensen, Søren Johannes, Mukerji, M. & Chauhan, N. S., 2021, In: Scientific Reports. 11, 11 p., 3963.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative bioacoustics: a roadmap for quantifying and comparing animal sounds across diverse taxa
Odom, K. J., Araya-Salas, M., Morano, J. L., Ligon, R. A., Leighton, G. M., Taff, C. C., Dalziell, A. H., Billings, A. C., Germain, Ryan Ross, Pardo, M., de Andrade, L. G., Hedwig, D., Keen, S. C., Shiu, Y., Charif, R. A., Webster, M. S. & Rice, A. N., 2021, In: Biological Reviews. 96, 4, p. 1135-1159 25 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Comparative transcriptome analysis reveals key epigenetic targets in SARS-CoV-2 infection
Salgado-Albarrán, M., Navarro-Delgado, E. I., Del Moral-Morales, A., Alcaraz, N., Baumbach, J., González-Barrios, R. & Soto-Reyes, E., 2021, In: n p j Systems Biology and Applications. 7, 14 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparison of Delivery Methods in Phage Therapy against Flavobacterium columnare Infections in Rainbow Trout
Kunttu, H. M. T., Runtuvuori-Salmela, A., Middelboe, Mathias, Clark, J. & Sundberg, L. R., 2021, In: Antibiotics. 10, 8, 19 p., 914.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Competition-based screening helps to secure the evolutionary stability of a defensive microbiome
Worsley, S. F., Innocent, T. M., Holmes, N. A., Al-Bassam, M. M., Schiøtt, M., Wilkinson, B., Murrell, J. C., Boomsma, Jacobus J., Yu, D. W. & Hutchings, M. I., 2021, In: BMC Biology. 19, 20 p., 205.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comprehensive analysis of genetic and clinical characteristics of 30 patients with X-linked juvenile retinoschisis in China
Gao, F., Dong, J., Wang, D., Chen, F., Hu, F., Chang, Q., Xu, P., Liu, W., Li, J., Huang, Y., Wu, J. & Xu, G., 2021, In: Acta Ophthalmologica. 99, 4, p. e470-e479 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational and Experimental Assessment of Backbone Templates for Computational Redesign of the Thioredoxin Fold
Marin, Frederikke Isa, Johansson, Kristoffer Enøe, O'Shea, Charlotte, Lindorff-Larsen, Kresten & Winther, Jakob R., 2021, In: The Journal of Physical Chemistry B. 125, 40, p. 11141-11149Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Computational methods for chromosome-scale haplotype reconstruction
Garg, S., 2021, In: Genome Biology. 22, 24 p., 101.Research output: Contribution to journal › Review › Research › peer-review
- Published
Conformational Ensembles of Noncoding Elements in the SARS-CoV-2 Genome from Molecular Dynamics Simulations
Bottaro, S., Bussi, G. & Lindorff-Larsen, Kresten, 2021, In: Journal of the American Chemical Society. 143, 22, p. 8333-8343Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Connecting the αα-hubs: same fold, disordered ligands, new functions
Staby, L., Bugge, K., Falbe-Hansen, R. G., Salladini, Edoardo, Skriver, Karen & Kragelund, Birthe Brandt, 2021, In: Cell Communication and Signaling. 19, 5 p., 2.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Conservation of Long-tailed Macaques: Implications of the Updated IUCN Status and the CoVID-19 Pandemic
Hansen, Malene Friis, Gill, M., Nawangsari, V. A., Sanchez, K. L., Cheyne, S. M., Nijman, V. & Fuentes, A., 2021, In: Primate Conservation. 35, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conservative route to genome compaction in a miniature annelid
Martín-Durán, J. M., Vellutini, B. C., Marlétaz, F., Cetrangolo, V., Cvetesic, N., Thiel, D., Henriet, S., Grau-Bové, X., Carrillo-Baltodano, A. M., Gu, W., Kerbl, A., Marquez, Y., Bekkouche, N., Chourrout, D., Gómez-Skarmeta, J. L., Irimia, M., Lenhard, B., Worsaae, Katrine & Hejnol, A., 2021, In: Nature Ecology and Evolution. 5, 2, p. 231-242Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contingency and determinism in the evolution of bird song sound frequency
Friis, J. I., Dabelsteen, Torben & Cardoso, G. C., 2021, In: Scientific Reports. 11, 9 p., 11600.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contrasting responses of major and minor volatile compounds to warming and gall-infestation in the Arctic willow Salix myrsinites
Swanson, L., Li, Tao & Rinnan, Riikka, 2021, In: Science of the Total Environment. 793, 10 p., 148516.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contrasting use of space by two migratory Afro-Palearctic warblers on their African non-breeding grounds
Mostafa, D. A. A., Willemoes, M., Salewski, V., Ortvad, T. E., Dabelsteen, Torben & Thorup, Kasper, 2021, In: Journal of Ornithology. 162, 3, p. 813-821 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Contributions to OH reactivity from unexplored volatile organic compounds measured by PTR-ToF-MS – a case study in a suburban forest of the Seoul metropolitan area during the Korea–United States Air Quality Study (KORUS-AQ) 2016
Sanchez, D., Seco, Roger, Gu, D., Guenther, A., Mak, J., Lee, Y., Kim, D., Ahn, J., Blake, D., Herndon, S., Jeong, D., Sullivan, J. T., Mcgee, T., Park, R. & Kim, S., 2021, In: Atmospheric Chemistry and Physics. 21, 8, p. 6331-6345 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Correlated transcriptional responses provide insights into the synergy mechanisms of the furazolidone, vancomycin, and sodium deoxycholate triple combination in escherichia coli
Olivera, Catrina Diane Peralta, Cox, M. P., Rowlands, G. J. & Rakonjac, J., 2021, In: mSphere. 6, 5, 14 p., e00627-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cruise Report EUROFLEETS2 ESAW-2 ‘Evolution and spreading of the Southern Adriatic Waters'(ESAW) ESAW-2
Kovacevic, V., Bensi, M., Giani, M., Dellisanti, Walter, Urbini, L., Pacciaroni, M., Muslim, S., Mihanovic, H., Pavlovic, M. & Karthauser, C., 2021, Relazione Interna OGS 2021/50 OCE 21.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication
- Published
Crustacean Fauna of the Aral Sea and its Relation to Ichthyofauna During the Modern Regression Crisis and Efforts at Restoration
Plotnikov, I. S., Aladin, N. V., Mossin, J. & Høeg, Jens Thorvald, 2021, In: Zoological Studies. 60, 24 p., 25.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding
Wang, Kaituo, Dagil, Robert, Lavstsen, Thomas, Misra, S. K., Spliid, C. B., Wang, Yong, Gustavsson, Tobias, Sandoval, D. R., Vidal-Calvo, E. E., Choudhary, Swati, Agerbæk, Mette Ørskov, Lindorff-Larsen, Kresten, Nielsen, Morten Agertoug, Theander, Thor Grundtvig, Sharp, J. S., Clausen, Thomas Mandel, Gourdon, Pontus Emanuel & Salanti, Ali, 2021, In: Nature Communications. 12, 1, 10 p., 2956.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DEER-PREdict: Software for efficient calculation of spin-labeling EPR and NMR data from conformational ensembles
Tesei, Giulio, Martins, J. M., Kunze, M. B. A., Wang, Yong, Crehuet, R. & Lindorff-Larsen, Kresten, 2021, In: PLOS Computational Biology. 17, 1, 18 p., e1008551.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA Double-Strand Break-Induced Gene Amplification in Yeast
Strucko, T., Lisby, Michael & Mortensen, U. H., 2021, Homologous Recombination: Methods and Protocols. Aguilera, A. & Carreira, A. (eds.). Humana Press, p. 239-252 14 p. (Methods in Molecular Biology, Vol. 2153).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Genetic diversity within lichen photobionts of the Lecanora varia group (Lichenes, Ascomycota)
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Long-term survival of dinoflagellate cysts in anoxic marine sediments.
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Danmarks biodiversitets fremtid: de væsentligste udfordringer og højest prioriterede virkemidler
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Complexity of avian evolution revealed by family-level genomes
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Næste niveau for dansk life science er verdenstoppen – vi har fagligheden til at være der: Danske forskere, talenter og virksomheder har både bredden og niveauet til at gøre København til det næste Kendall Square. Biologisk Institut står på spring i startklodserne.
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