Department of Biology

 

 
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  1. 2021
  2. Published

    AutoCNV: a semiautomatic CNV interpretation system based on the 2019 ACMG/ClinGen Technical Standards for CNVs

    Fan, C., Wang, Z., Sun, Y., Sun, J., Liu, X., Kang, L., Xu, Y., Yang, M., Dai, W., Song, L., Wei, X., Xiang, J., Huang, H., Zhou, M., Zeng, F., Huang, L., Xu, Z. & Peng, Z., 2021, In: BMC Genomics. 22, 12 p., 721.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Bacteria Respond Stronger Than Fungi Across a Steep Wood Ash-Driven pH Gradient

    Cruz-Paredes, C., Bang-Andreasen, T., Christensen, Søren, Ekelund, Flemming, Frøslev, Tobias Guldberg, Jacobsen, C. S., Johansen, Jesper Liengaard, Mortensen, Louise Hindborg, Rønn, Regin, Vestergård, M. & Kjøller, Rasmus, 2021, In: Frontiers in Forests and Global Change. 4, 10 p., 781844.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021

    Krupovic, M., Turner, D., Morozova, V., Dyall-Smith, M., Oksanen, H. M., Edwards, R., Dutilh, B. E., Lehman, S. M., Reyes, A., Baquero, D. P., Sullivan, M. B., Uchiyama, J., Nakavuma, J., Barylski, J., Young, M. J., Du, S., Alfenas-Zerbini, P., Kushkina, A., Kropinski, A. M., Kurtböke, I. & 29 others, Brister, J. R., Lood, C., Sarkar, B. L., Yigang, T., Liu, Y., Huang, L., Wittmann, J., Chanishvili, N., van Zyl, L. J., Rumnieks, J., Mochizuki, T., Jalasvuori, M., Aziz, R. K., Łobocka, M., Stedman, K. M., Shkoporov, A. N., Gillis, A., Peng, Xu, Enault, F., Knezevic, P., Lavigne, R., Rhee, S. K., Cvirkaite-Krupovic, V., Moraru, C., Moreno Switt, A. I., Poranen, M. M., Millard, A., Prangishvili, D. & Adriaenssens, E. M., 2021, In: Archives of Virology. 166, 11, p. 3239-3244 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Bacterial chromosomal mobility via lateral transduction exceeds that of classical mobile genetic elements

    Humphrey, S., Fillol-Salom, A., Quiles-Puchalt, N., Ibarra Chavez, Rodrigo, Haag, A. F., Chen, J. & Penadés, J. R., 2021, In: Nature Communications. 12, 13 p., 6509.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Bacteriophage Resistance Affects Flavobacterium columnare Virulence Partly via Mutations in Genes Related to Gliding Motility and the Type IX Secretion System

    Kunttu, H. M. T., Runtuvuori-Salmela, A., Sundell, K., Wiklund, T., Middelboe, Mathias, Landor, L., Ashrafi, R., Hoikkala, V. & Sundberg, L., 2021, In: Applied and Environmental Microbiology. 87, 16, 19 p., e00812-21 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Baleen whale prey consumption based on high-resolution foraging measurements

    Savoca, M. S., Czapanskiy, M. F., Kahane-Rapport, S. R., Gough, W. T., Fahlbusch, J. A., Bierlich, K. C., Segre, P. S., drf168, drf168, Penry, G. S., Wiley, D. N., Calambokidis, J., Nowacek, D. P., Johnston, D. W., Pyenson, N. D., Friedlaender, A. S., Hazen, E. L. & Goldbogen, J. A., 2021, In: Nature. 599, 7883, p. 85-90 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Benchmarking blockchain-based gene-drug interaction data sharing methods: A case study from the iDASH 2019 secure genome analysis competition blockchain track

    Kuo, T., Bath, T., Ma, S., Pattengale, N., YANG, Meng, Cao, Y., Hudson, C. M., Kim, J., Post, K., Xiong, L. & Ohno-Machado, L., 2021, In: International Journal of Medical Informatics. 154, 8 p., 104559.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Benchmarking plant diversity of Palaearctic grasslands and other open habitats

    Biurrun, I., Pielech, R., Dembicz, I., Gillet, F., Kozub, Ł., Marcenò, C., Reitalu, T., Van Meerbeek, K., Guarino, R., Chytrý, M., Pakeman, R. J., Preislerová, Z., Axmanová, I., Burrascano, S., Bartha, S., Boch, S., Bruun, H. H., Conradi, T., De Frenne, P., Essl, F. & 203 others, Filibeck, G., Hájek, M., Jiménez-Alfaro, B., Kuzemko, A., Molnár, Z., Pärtel, M., Pätsch, R., Prentice, H. C., Roleček, J., Sutcliffe, L. M. E., Terzi, M., Winkler, M., Wu, J., Aćić, S., Acosta, A. T. R., Afif, E., Akasaka, M., Alatalo, J. M., Aleffi, M., Aleksanyan, A., Ali, A., Apostolova, I., Ashouri, P., Bátori, Z., Baumann, E., Becker, T., Belonovskaya, E., Benito Alonso, J. L., Berastegi, A., Bergamini, A., Bhatta, K. P., Bonini, I., Büchler, M., Budzhak, V., Bueno, Á., Buldrini, F., Campos, J. A., Cancellieri, L., Carboni, M., Ceulemans, T., Chiarucci, A., Chocarro, C., Conti, L., Csergő, A. M., Cykowska-Marzencka, B., Czarniecka-Wiera, M., Czarnocka-Cieciura, M., Czortek, P., Danihelka, J., de Bello, F., Deák, B., Demeter, L., Deng, L., Diekmann, M., Dolezal, J., Dolnik, C., Dřevojan, P., Dupré, C., Ecker, K., Ejtehadi, H., Erschbamer, B., Etayo, J., Etzold, J., Farkas, T., Farzam, M., Fayvush, G., Calzado, M. R. F., Finckh, M., Fjellstad, W., Fotiadis, G., García-Magro, D., García-Mijangos, I., Gavilán, R. G., Germany, M., Ghafari, S., Giusso del Galdo, G. P., Grytnes, J., Güler, B., Gutiérrez-Girón, A., Helm, A., Herrera, M., Hüllbusch, E. M., Ingerpuu, N., Jägerbrand, A. K., Jandt, U., Janišová, M., Jeanneret, P., Jeltsch, F., Jensen, K., Jentsch, A., Kącki, Z., Kakinuma, K., Kapfer, J., Kargar, M., Kelemen, A., Kiehl, K., Kirschner, P., Koyama, A., Langer, N., Lazzaro, L., Lepš, J., Li, C., Li, F. Y., Liendo, D., Lindborg, R., Löbel, S., Lomba, A., Lososová, Z., Lustyk, P., Luzuriaga, A. L., Ma, W., Maccherini, S., Magnes, M., Malicki, M., Manthey, M., Mardari, C., May, F., Mayrhofer, H., Meier, E. S., Memariani, F., Merunková, K., Michelsen, O., Molero Mesa, J., Moradi, H., Moysiyenko, I., Mugnai, M., Naqinezhad, A., Natcheva, R., Ninot, J. M., Nobis, M., Noroozi, J., Nowak, A., Onipchenko, V., Palpurina, S., Pauli, H., Pedashenko, H., Pedersen, C., Peet, R. K., Pérez-Haase, A., Peters, J., Pipenbaher, N., Pirini, C., Pladevall-Izard, E., Plesková, Z., Potenza, G., Rahmanian, S., Rodríguez-Rojo, M. P., Ronkin, V., Rosati, L., Ruprecht, E., Rusina, S., Sabovljević, M., Sanaei, A., Sánchez, A. M., Santi, F., Savchenko, G., Sebastià, M. T., Shyriaieva, D., Silva, V., Škornik, S., Šmerdová, E., Sonkoly, J., Sperandii, M. G., Staniaszek-Kik, M., Stevens, C., Stifter, S., Suchrow, S., Swacha, G., Świerszcz, S., Talebi, A., Teleki, B., Tichý, L., Tölgyesi, C., Torca, M., Török, P., Tsarevskaya, N., Tsiripidis, I., Turisová, I., Ushimaru, A., Valkó, O., Van Mechelen, C., Vanneste, T., Vasheniak, I., Vassilev, K., Viciani, D., Villar, L., Virtanen, R., Vitasović-Kosić, I., Vojtkó, A., Vynokurov, D., Waldén, E., Wang, Y., Weiser, F., Wen, L., Wesche, K., White, H., Widmer, S., Wolfrum, S., Wróbel, A., Yuan, Z., Zelený, D., Zhao, L. & Dengler, J., 2021, In: Journal of Vegetation Science. 32, 4, 21 p., e13050.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Bending during seedling emergence: Mechanochemical insight

    Bai, B., 2021, In: Trends in Plant Science. 26, 9, p. 879-881 3 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  11. Published

    Betydningen af byggeriet af ”Fælledby” for biodiversiteten på Amager Fælled

    Ejrnæs, R. & Bruun, Hans Henrik, 2021, Kalø: Aarhus Universitet. 7 p. (Fagligt notat; No. 25, Vol. 2021).

    Research output: Book/Report › Report › Commissioned › peer-review

  12. Published

    Bidirectional exchange of biogenic volatile organic compounds between subarctic heath tundra and the atmosphere

    Baggesen, N. S., 2021, Department of Biology, Faculty of Science, University of Copenhagen. 202 p.

    Research output: Book/Report › Ph.D. thesis › Research

  13. Published

    Binding Revisited - Avidity in Cellular Function and Signaling

    qrc243, qrc243 & Teilum, Kaare, 2021, In: Frontiers in Molecular Biosciences. 7, 13 p., 615565.

    Research output: Contribution to journal › Review › Research › peer-review

  14. Published

    Binding Sites for Oligosaccharide Repeats from Lactic Acid Bacteria Exopolysaccharides on Bovine β-Lactoglobulin Identified by NMR Spectroscopy

    Birch, J., Khan, S., Madsen, M., Kjeldsen, C., Møller, M. S., Stender, E. G. P., Peters, G. H. J., Duus, J. Ø., Kragelund, Birthe Brandt & Svensson, B., 2021, In: ACS Omega. 6, 13, p. 9039-9052 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Bioactive Ascochlorin Analogues from the Marine-Derived Fungus Stilbella fimetaria

    Subko, K., Kildgaard, S., Vicente, F., Reyes, F., Genilloud, O. & Larsen, T. O., 2021, In: Marine Drugs. 19, 2, 12 p., 46.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Biofilms can act as plasmid reserves in the absence of plasmid specific selection

    Røder, Henriette Lyng, Trivedi, Urvish, Russel, J., Kragh, K. N., Herschend, J., Thalsø-Madsen, I., Tolker-Nielsen, Tim, Bjarnsholt, Thomas, Burmølle, Mette & Madsen, Jonas Stenløkke, 2021, In: npj Biofilms and Microbiomes. 7, 6 p., 78.

    Research output: Contribution to journal › Letter › Research › peer-review

  17. Published

    Break-up of lake ice in the Arctic: strong linkage to mean summer temperature

    Christoffersen, Kirsten Seestern, Raundrup, K. & Lauridsen, T. L., 2021, Greenland Ecosystem Monitoring Annual Report Cards 2020. Christensen, T. R., Arndal, M. F. & Topp-Jørgensen, E. (eds.). Aarhus University, DCE - Danish Centre for Environment and Energy, p. 14-15

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  18. Published

    Bregner: sjældent spændende

    Sand-Jensen, Kaj & Schou, J. C., 2021, In: URT. 3, p. 6-13 7 p.

    Research output: Contribution to journal › Journal article › Communication

  19. Published

    Broad Dissemination of Plasmids across Groundwater-Fed Rapid Sand Filter Microbiomes

    Pinilla Redondo, Rafael, Olesen, Asmus Kalckar, Russel, J., de Vries, L. E., Christensen, L. D., Musovic, S., Nesme, Joseph & Sørensen, Søren Johannes, 2021, In: mBio. 12, 6, 13 p., e0306821.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Bsgatlas: A unified bacillus subtilis genome and transcriptome annotation atlas with enhanced information access

    Geissler, Adrian Sven, Anthon, Christian, Alkan, F., González-Tortuero, E., Poulsen, L. D., Kallehauge, T. B., Breüner, A., Seemann, Ernst Stefan, Vinther, Jeppe & Gorodkin, Jan, 2021, In: Microbial Genomics. 7, 2, 17 p., 000524.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Buffering effects of soil seed banks on plant community composition in response to land use and climate

    Plue, J., Van Calster, H., Auestad, I., Basto, S., Bekker, R. M., Bruun, H. H., Chevalier, R., Decocq, G., Grandin, U., Hermy, M., Jacquemyn, H., Jakobsson, A., Jankowska-Błaszczuk, M., Kalamees, R., Koch, M. A., Marrs, R. H., Marteinsdóttir, B., Milberg, P., Måren, I. E., Pakeman, R. J. & 5 others, Phoenix, G. K., Thompson, K., Vandvik, V., Wagner, M. & Auffret, A. G., 2021, In: Global Ecology and Biogeography. 30, 1, p. 128-139 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    CDX2 regulates interleukin-33 gene expression in intestinal epithelial cells (LS174T)

    Larsen, S., Seidelin, Jakob Benedict, Davidsen, J., Dahlgaard, K., Nielsen, Claus Henrik, Bennett, Eric Paul, Pedersen, O. B., Coskun, M. & Troelsen, J. T., 2021, In: FEBS Open Bio. 11, 6, p. 1638-1644

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    CEP78 functions downstream of CEP350 to control biogenesis of primary cilia by negatively regulating CP110 levels

    Gonçalves, A. B., Hasselbalch, S. K., Joensen, B. B., Patzke, S., Martens, P., Ohlsen, S. K., Quinodoz, M., Nikopoulos, K., Suleiman, R., Jeppesen, M. P. D., Weiss, C., Christensen, Søren Tvorup, Rivolta, C., Andersen, J. S., Farinelli, P. & Pedersen, Lotte Bang, 2021, In: eLife. 10, 34 p., e63731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    CGRP-dependent signalling pathways involved in mouse models of GTN- cilostazol- and levcromakalim-induced migraine

    Christensen, S. L., Rasmussen, R. H., Ernstsen, C., La Cour, S., David, A., Chaker, J., Haanes, K. A., Christensen, Søren Tvorup, Olesen, Jes & Kristensen, D. M., 2021, In: Cephalalgia. 41, 14, p. 1413-1426 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    COVID-19 drug practices risk antimicrobial resistance evolution

    MetaSUB Consortium, M. C., 2021, In: The Lancet Microbe. 2, 4, p. e135-e136

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  26. Published

    Calmodulin downregulation in conditional knockout HeLa cells inhibits cell migration

    Alcalde, J., Munk, M., González-Muñoz, M., Panina, S., Berchtold, Martin Werner & Villalobo, A., 2021, In: Archives of Biochemistry and Biophysics. 697, 9 p., 108680.

    Research output: Contribution to journal › Journal article › Research › peer-review

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