Karsten Kristiansen

Karsten Kristiansen

Professor


  1. Published

    Diet-induced obesity, energy metabolism and gut microbiota in C57BL/6J mice fed Western diets based on lean seafood or lean meat mixtures

    Holm, J. B., Rønnevik, A. K., Tastesen, H. S., Fjære, E., Fauske, K. R., Aune, U. L., Madsen, L., Kristiansen, Karsten & Liaset, B., May 2016, In: The Journal of Nutritional Biochemistry. 31, p. 127-136 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    Developmental trajectory of the healthy human gut microbiota during the first 5 years of life

    Roswall, J., Olsson, L. M., Kovatcheva-Datchary, P., Nilsson, S., Tremaroli, V., Simon, M., Kiilerich, P., Akrami, R., Kramer, M., Uhlen, M., Gummesson, A., Kristiansen, Karsten, Dahlgren, J. & Bäckhed, F., 2021, In: Cell Host & Microbe. 29, 5, p. 765-776.e3 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Development and clinical validation of a circulating tumor DNA test for the identification of clinically actionable mutations in nonsmall cell lung cancer

    Liu, L., Liu, H., Shao, D., Liu, Z., Wang, J., Deng, Q., Tang, H., Yang, H., Zhang, Y., Qiu, Y., Cui, F., Tan, M., Zhang, P., Li, Z., Liu, J., Liang, W., Wang, Y., Peng, Z., Wang, J., Yang, H. & 4 others, Mao, M., Kristiansen, Karsten, Ye, M. & He, J., 2018, In: Genes, Chromosomes & Cancer. 57, 4, p. 211-220 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Detection of a single base deletion in codon 424 of the low density lipoprotein receptor gene in a Danish family with familial hypercholesterolemia

    Nissen, H., Hansen, A. B., Guldberg, P., Petersen, N. E., Larsen, M. L., Haghfelt, T., Kristiansen, Karsten & Hørder, M., 1994, In: Atherosclerosis. 111, 2, p. 209-15 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Design and synthesis of novel Y-shaped barbituric acid derivatives as PPARγ activators

    Dixit, V. A., Rathi, P. C., Bhagat, S., Gohlke, H., Petersen, R. K., Kristiansen, Karsten, Chakraborti, A. K. & Bharatam, P. V., 2016, In: European Journal of Medicinal Chemistry. 108, p. 423-435 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Deregulated MAPK Activity Prevents Adipocyte Differentiation of Fibroblasts Lacking the Retinoblastoma Protein

    Hansen, J. B., Petersen, R. K., Jørgensen, C. & Kristiansen, Karsten, 2002, In: Journal of Biological Chemistry. 277, 29, p. 26335-26339

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Depot-dependent effects of adipose tissue explants on co-cultured hepatocytes

    Du, Z., Ma, T., Lock, E., Hao, Q., Kristiansen, Karsten, Frøyland, L. & Madsen, L., 1 Jan 2011, In: P L o S One. 6, 6, 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Depletion of regulatory T cells leads to an exacerbation of delayedtype hypersensitivity arthritis in C57BL/6 mice that can be counteracted by IL-17 blockade

    Atkinson, S. M., Hoffmann, U., Bach, E., Danneskiold-Samsøe, Niels Banhos, Kristiansen, Karsten, Serikawa, K., Fox, B., Kruse, K., Haase, C., Skov, Søren & Nansen, A., 2016, In: Disease Models & Mechanisms. 9, p. 427-440 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Delta-interacting Protein A, a New Inhibitory Partner of CCAAT/Enhancer-binding Protein ß, Implicated in Adipocyte Differentiation

    Bezy, O., Elabd, C., Cochet, O., Petersen, R. K., Arkowitz, R., Kristiansen, Karsten & fl., M., 2005, In: Journal of Biological Chemistry. 280, 12, p. 11432-11438

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

    Zhang, G., Guo, G., Hu, X., Zhang, Y., Li, Q., Li, R., Zhuang, R., Lu, Z., He, Z., Fang, X., Chen, L., Tian, W., Tao, Y., Kristiansen, Karsten, Zhang, X., Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Genome Research. 20, 5, p. 646-54 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Deciphering unique and shared interactions between the human gut microbiota and oral antidiabetic drugs

    Ren, H., Shi, Z., Yang, F., Wang, S., Yuan, F., Li, T., Li, M., Zhu, J., Li, J., Wu, K., Zhang, Y., Ning, G., Kristiansen, Karsten, Wang, W., Gu, Y. & Zhong, H., 2024, In: iMeta. 3, 2, 9 p., e179.

    Research output: Contribution to journalComment/debateResearchpeer-review

  12. Published

    De novo assembly of human genomes with massively parallel short read sequencing

    Li, R., Zhu, H., Ruan, J., Qian, W., Fang, X., Shi, Z., Li, Y., Li, S., Shan, G., Kristiansen, Karsten, Li, S., Yang, H., Wang, J. & Wang, J., 2010, In: Genome Research. 20, 2, p. 265-72 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Data integration for prediction of weight loss in randomized controlled dietary trials

    Nielsen, R. L., Helenius, M., Garcia, S. L., Roager, H. M., Aytan-Aktug, D., Hansen, L. B. S., Lind, M. V., Vogt, J. K., Dalgaard, M. D., Bahl, M. I., Jensen, C. B., Muktupavela, R., Warinner, C., Aaskov, V., Gøbel, R., Kristensen, M. B., Frøkiær, H., Sparholt, M. H., Christensen, A. F., Vestergaard, H. & 8 others, Hansen, Torben, Kristiansen, Karsten, Brix, Susanne, Petersen, T. N., Lauritzen, Lotte, Licht, T. R., Pedersen, Oluf Borbye & Gupta, R., 2020, In: Scientific Reports. 10, 15 p., 20103.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Dairy consumption and physical fitness tests associated with fecal microbiome in a Chinese cohort

    Jie, Zhuye, Liang, S., Ding, Q., Li, F., Sun, X., Lin, Y., Chen, P., Cai, K., Wang, X., Zhang, T., Zhou, H., Lu, H., Xiao, L., Yang, H., Wang, J., Hou, Y., Kristiansen, Karsten, Jia, H. & Xu, X., 2021, In: Medicine in Microecology. 9, 9 p., 100038.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. DNA sequence analysis by MALDI mass spectrometry

    Kirpekar, F., Nordhoff, E., Larsen, L. K., Kristiansen, Karsten, Roepstorff, P. & Hillenkamp, F., 1998, In: Nucleic Acids Research. 26, 11, p. 2554-9 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Cyclic AMP (cAMP)-mediated stimulation of adipocyte differentiation requires the synergistic action of Epac- and cAMP-dependent protein kinase-dependent processes

    Petersen, R. K., Madsen, L., Pedersen, L. M., Hallenborg, P., Hagland, H., Viste, K., Døskeland, S. O. & Kristiansen, Karsten, 2008, In: Molecular and Cellular Biology. 28, 11, p. 3804-3816 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Crystallization and amino acid sequence of duck glucagon

    Sundby, F., Frandsen, E. K., Thomsen, J., Kristiansen, Karsten & Brunfeldt, K., 1972, In: FEBS Letters. 26, 1, p. 289-93 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Cross talk between insulin and bone morphogenetic protein signaling systems in brown adipogenesis

    Zhang, H., Schulz, T. J., Espinoza, D. O., Huang, T. L., Emanuelli, Brice, Kristiansen, Karsten & Tseng, Y., 1 Sep 2010, In: Molecular and Cellular Biology. 30, 17, p. 4224-33 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Cortisol regulation of ion transporter mRNA in Atlantic salmon gill and the effect of salinity on the signaling pathway

    Kiilerich, P., Kristiansen, Karsten & Madsen, S. S., 2007, In: Journal of Endocrinology. 194, 2, p. 417-427 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Corticosteroid regulation of Na+,K+-ATPase α1-isoform expression in Atlantic salmon gill during smolt development

    Kiilerich, P., Pedersen, S. H., Kristiansen, Karsten & Madsen, S. S., 2011, In: General and Comparative Endocrinology. 170, 2, p. 283-289 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Corrigendum: Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

    Forslund, K., Hildebrand, F., Nielsen, T., Falony, G., Le Chatelier, E., Sunagawa, S., Prifti, E., Vieira-Silva, S., Gudmundsdottir, V., Pedersen, H. K., Arumugam, M., Kristiansen, K., Voigt, A. Y., Vestergaard, H., Hercog, R., Costea, P. I., Kultima, J. R., Li, J., Jørgensen, T., Levenez, F. & 10 others, Doré, J., Nielsen, H. B., Brunak, Søren, Raes, J., Hansen, Torben, Wang, J., Ehrlich, S. D., Bork, P., Pedersen, Oluf Borbye & MetaHIT consortium, M. C., 3 May 2017, In: Nature. 545, 116, 1 p., 22318.

    Research output: Contribution to journalComment/debateResearch

  22. Published

    Conserved residues and their role in the structure, function, and stability of acyl-coenzyme A binding protein

    Kragelund, B. B., Poulsen, K., Andersen, K. V., Baldursson, T., Krøll, J. B., Neergård, T. B., Jepsen, J., Roepstorff, P., Kristiansen, Karsten, Poulsen, F. M., Knudsen, J. & Stenvang, Jan, 1999, In: Biochemistry. 38, 8, p. 2386-94 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Conserved residues and their role in the structure, function and stability of acyl-Coenzyme A binding protein

    Kragelund, B. B., Poulsen, K., Andersen, K. V., Baldursson, T., Krøll, J. B., Nergaard, T. B., Jepsen, J., Roepstorff, P., Kristiansen, Karsten, Poulsen, F. M. & Knudsen, J., 1999, In: Biochemistry. 38, p. 2386-2394

    Research output: Contribution to journalJournal articleResearch

  24. Conservation of active ribosomes in acetone-treated cells of Tetrahymena pyriformis

    Kristiansen, Karsten, Hartmann, B., Plesner, P. & Krüger, A., 1978, In: European Journal of Biochemistry. 83, 2, p. 389-94 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Comprehensive targeted super-deep next generation sequencing enhances differential diagnosis of solitary pulmonary nodules

    Ye, M., Li, S., Huang, W., Wang, C., Liu, L., Liu, J., Liu, J., Pan, H., Deng, Q., Tang, H., Jiang, L., Huang, W., Chen, X., Shao, D., Peng, Z., Wu, R., Zhong, J., Wang, Z., Zhang, X., Kristiansen, K. & 5 others, Wang, J., Yin, Y., Mao, M., He, J. & Liang, W., 2018, In: Journal of Thoracic Disease. 10, Suppl. 7, p. S820-S829 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Comprehensive genomic profiling of lung cancer using a validated panel to explore therapeutic targets in East Asian patients

    Liu, L., Liu, J., Shao, D., Deng, Q., Tang, H., Liu, Z., Chen, X., Guo, F., Lin, Y., Mao, M., Kristiansen, Karsten, Ye, M. & He, J., Dec 2017, In: Cancer Science. 108, 12, p. 2487-2494 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Comparison of the DNBSEQ platform and Illumina HiSeq 2000 for bacterial genome assembly

    Hu, T., Chen, J., Lin, X., He, W., Liang, H., Wang, M., Li, W., Wu, Z., Han, Mo, Jin, X., Kristiansen, Karsten, Xiao, L. & Zou, Y., 2024, In: Scientific Reports. 14, 1, 9 p., 1292.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Comparison of IR- and UV-matrix-assisted laser desorption/ionization mass spectrometry of oligodeoxynucleotides

    Nordhoff, E., Kirpekar, F., Karas, M., Cramer, R., Hahner, S., Hillenkamp, F., Kristiansen, Karsten, Roepstroff, P. & Lezius, A., 1994, In: Nucleic Acids Research. 22, 13, p. 2460-5 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Comparative analysis of autosomes in karyotypes from pig and rabbit using RBG-banding and in situ hybridization

    Poulsen, B. S., Kristiansen, Karsten & Rønne, M., 1991, In: Cytobios. 67, 268, p. 23-7 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Comparative Analysis of Sample Extraction and Library Construction for Shotgun Metagenomics

    Peng, Z., Zhu, X., Wang, Z., Yan, X., Wang, G., Tang, M., Jiang, A. & Kristiansen, Karsten, 2020, In: Bioinformatics and Biology Insights. 14, 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Cold-stimulated brown adipose tissue activation is related to changes in serum metabolites relevant to NAD+ metabolism in humans

    U-Din, M., de Mello, V. D., Tuomainen, M., Raiko, J., Niemi, T., Fromme, T., Klåvus, A., Gautier, N., Haimilahti, K., Lehtonen, M., Kristiansen, Karsten, Newman, J. W., Pietiläinen, K. H., Pihlajamäki, J., Amri, E. Z., Klingenspor, M., Nuutila, P., Pirinen, E., Hanhineva, K. & Virtanen, K. A., 26 Sep 2023, In: Cell Reports. 42, 9, 23 p., 113131.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Co-diversification of an intestinal Mycoplasma and its salmonid host

    Rasmussen, Jacob Agerbo, Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Cloning and characterization of human very-long-chain acyl-CoA dehydrogenase cDNA, chromosomal assignment of the gene and identification in four patients of nine different mutations within the VLCAD gene

    Andresen, B. S., Bross, P., Vianey-Saban, C., Divry, P., Zabot, M. T., Roe, C. R., Nada, M. A., Byskov, A., Kruse, T. A., Neve, S., Kristiansen, Karsten, Knudsen, I., Corydon, M. J. & Gregersen, N., 1996, In: Human Molecular Genetics. 5, 4, p. 461-72 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Clinical characteristics of the BREATHE cohort: a real-life study on patients with asthma and COPD

    Backer, V., Klein, D. K., Bodtger, U., Romberg, K., Porsbjerg, C., Erjefält, J. S., Kristiansen, K., Xu, R., Silberbrandt, A., Frøssing, L., Hvidtfeldt, M., Obling, N., Jarenbäck, L., Nasr, A., Tufvesson, E., Mori, M., Winther-Jensen, M., Karlsson, L., Nihlén, U., Flintegaard, T. V. & 1 others, Bjermer, L., 2020, In: European Clinical Respiratory Journal. 7, 1, 11 p., 1736934.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Chronic Trichuris muris infection decreases diversity of the intestinal microbiota and concomitantly increases the abundance of lactobacilli

    Holm, J. B., Sorobetea, D., Kiilerich, P., Ramayo-Caldas, Y., Estellé, J., Ma, Tao, Madsen, L., Kristiansen, Karsten & Svensson-Frej, M., 2015, In: PLOS ONE. 10, 5, 22 p., e0125495.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Chromosome-scale genomes provide new insights into subspecies divergence and evolutionary characteristics of the giant panda

    Guang, X., Lan, T., Wan, Q. H., Huang, Y., Li, H., Zhang, M., Li, R., Zhang, Z., Lei, Y., Zhang, L., Zhang, H., Li, D., Li, X., Li, H., Xu, Y., Qiao, M., Wu, D., Tang, K., Zhao, P., Lin, J-Q. & 11 others, Sahu, S. K., Liang, Q., Jiang, W., Zhang, D., Xu, X., Liu, X., Lisby, Michael, Yang, H., Kristiansen, Karsten, Liu, Huan & Fang, S., 2021, In: Science Bulletin. 66, 19, p. 2002-2013 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets

    Han, L., Lan, T., Li, D., Li, H., Deng, L., Peng, Z., He, S., Zhou, Y., Han, R., Li, L., Lu, Y., Lu, H., Wang, Q., Yang, S., Zhu, Y., Huang, Y., Cheng, X., Yu, J., Wang, Y., Sun, H. & 8 others, Chai, H., Yang, H., Xu, X., Lisby, Michael, Liu, Q., Kristiansen, Karsten, Liu, Huan & Hou, Z., 2022, In: Molecular Ecology Resources. 22, 2, p. 768-785 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Chromatin structure and conserved sequence elements in genes encoding ribosomal proteins in Tetrahymena thermophila

    Nørgaard, P., Dreisig, H. & Kristiansen, Karsten, 1992, In: European Journal of Biochemistry. 210, 2, p. 621-7 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data

    Xiong, K., Zhou, H., Lin, C., Yin, J., Kristiansen, Karsten, Yang, H. & Li, G., 2022, In: Communications Biology . 5, 11 p., 510.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Characterization of two isoalleles and three mutations in both isoforms of purified recombinant human porphobilinogen deaminase

    Brøns-Poulsen, J., Christiansen, L., Petersen, N. E., Hørder, M. & Kristiansen, Karsten, 2005, In: Scandinavian Journal of Clinical & Laboratory Investigation. 65, 2, p. 93-105 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Characterization of the human skin resistome and identification of two microbiota cutotypes

    Li, Z., Xia, J., Jiang, L., Tan, Y., An, Y., Zhu, X., Ruan, J., Chen, Z., Zhen, H., Ma, Y., Jie, Z., Xiao, L., Yang, H., Wang, J., Kristiansen, K., Xu, X., Jin, L., Nie, C., Krutmann, J., Liu, X. & 1 others, Wang, J., 2021, In: Microbiome. 9, 18 p., 47.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patients

    Zhong, H., Wang, Y., Shi, Z., Zhang, L., Ren, H., He, W., Zhang, Z., Zhu, A., Zhao, J., Xiao, F., Yang, F., Liang, T., Ye, F., Zhong, B., Ruan, S., Gan, M., Zhu, J., Li, F., Li, F., Wang, D. & 13 others, Li, J., Ren, P., Zhu, S., Yang, H., Wang, J., Kristiansen, Karsten, Tun, H. M., Chen, W., Zhong, N., Xu, X., Li, Y., Li, J. & Zhao, J., 2021, In: Cell Discovery. 7, 14 p., 23.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Characterization of genomic clones using circulating tumor DNA in patients with hepatocarcinoma

    Sun, Y., Meng, R., Cheng, Z., Fan, C., Wei, X., Yang, Y., Wu, G., Kristiansen, Karsten & Xue, J., 2018, In: Translational Cancer Research. 7, 2, p. 321-329 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Characterization of acidic 60 S ribosomal proteins in Tetrahymena pyriformis

    Sandermann, J., Krüger, A. & Kristiansen, Karsten, 1979, In: FEBS Letters. 107, 2, p. 343-7 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Characterization of a cobalamin-binding plasma protein from a patient with hepatoma

    Nexö, E., Olesen, H., Christensen, J. M., Thomsen, J. & Kristiansen, Karsten, 1975, In: Scandinavian Journal of Clinical & Laboratory Investigation. 35, 7, p. 683-90 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Characterization and description of Faecalibacterium butyricigenerans sp. nov. and F. longum sp. nov., isolated from human faeces

    Zou, Y., Lin, X., Xue, W., Tuo, L., Chen, M., Chen, X., Sun, C., Li, F., Liu, S., Dai, Y., Kristiansen, Karsten & Xiao, L., 2021, In: Scientific Reports. 11, 13 p., 11340.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Cervicovaginal microbiome dynamics after taking oral probiotics

    Chen, Chen, Hao, L., Zhang, Z., Tian, L., Zhang, X., Zhu, J., Jie, Zhuye, Tong, X., Xiao, L., Zhang, T., Jin, X., Xu, X., Yang, H., Wang, J., Kristiansen, Karsten & Jia, H., 2021, In: Journal of Genetics and Genomics. 48, 8, p. 716-726 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Cell death in Tetrahymena thermophila: new observations on culture conditions

    Christensen, S. T., Sørensen, H., Beyer, N. H., Kristiansen, Karsten, Rasmussen, L. & Rasmussen, M. I., 2001, In: Cell Biology International. 25, 6, p. 509-19 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Casein and red meat proteins differentially affect the composition of the gut microbiota in weaning rats

    Zhao, Fan, Wang, Chong, Song, S., Fang, C., Zhou, G., Li, C. & Kristiansen, Karsten, 2022, In: Food Chemistry. 397, 11 p., 133769.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    CRISPR/Cascade 9-Mediated Genome Editing-Challenges and Opportunities

    Roy, B., Zhao, J., Yang, C., Luo, W., Xiong, T., Li, Y., Fang, X., Gao, G., Singh, C. O., Madsen, L., Zhou, Y. & Kristiansen, Karsten, 2018, In: Frontiers in Genetics. 9, 12 p., 240.

    Research output: Contribution to journalReviewResearchpeer-review

ID: 6489714